The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP034723	Salmonella enterica subsp. enterica serovar Stanleyville strain RSE01 chromosome, complete genome	4693269	1144851	1199808	4693269	holin,tRNA,terminase,lysis,tail	Enterobacteria_phage(24.0%)	56	NA	NA
AZT67374.1|1144851_1145619_+|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
AZT67375.1|1145659_1146007_+	50S ribosomal protein L19	NA	NA	NA	NA	NA
AZT67376.1|1146163_1147384_-	diguanylate cyclase	NA	A0A2K8I9Y5	Pseudomonas_phage	36.2	5.8e-08
AZT67377.1|1147376_1147895_-	YfiR family protein	NA	NA	NA	NA	NA
AZT67378.1|1148334_1149405_+	3-deoxy-7-phosphoheptulonate synthase AroF	NA	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	51.8	2.4e-90
AZT67379.1|1149414_1150536_+	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA	NA
AZT67380.1|1150593_1151502_+	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA	NA
AZT67381.1|1151462_1152623_-	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA	NA
AZT70385.1|1152722_1152770_-	hypothetical protein	NA	NA	NA	NA	NA
AZT67382.1|1152873_1153212_-	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA	NA
AZT67383.1|1153482_1154220_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA	NA
AZT67384.1|1154351_1155332_+	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA	NA
AZT67385.1|1155328_1156060_+	polyphenol oxidase	NA	NA	NA	NA	NA
AZT67386.1|1156189_1158763_+	ATP-dependent chaperone ClpB	NA	H6X3M6	Enterobacteria_phage	35.5	2.6e-127
AZT67387.1|1164514_1164751_+	hypothetical protein	NA	NA	NA	NA	NA
AZT67388.1|1164760_1165216_+	DUF4385 domain-containing protein	NA	E3SMI8	Prochlorococcus_phage	50.0	3.0e-34
AZT67389.1|1165319_1166621_+	MFS transporter	NA	Q6JIH2	Burkholderia_virus	30.4	1.5e-43
AZT70386.1|1166971_1168327_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
AZT67390.1|1168441_1171102_-	protein lysine acetyltransferase	NA	NA	NA	NA	NA
AZT67391.1|1171155_1171836_-	DTW domain-containing protein	NA	NA	NA	NA	NA
AZT67392.1|1171908_1172328_-	thioredoxin TrxC	NA	A0A0K2FIM3	Achromobacter_phage	40.6	1.2e-16
AZT67393.1|1172531_1173569_+|tRNA	tRNA/rRNA methyltransferase	tRNA	NA	NA	NA	NA
AZT67394.1|1173684_1174374_-	uracil-DNA glycosylase	NA	A0A172DS90	Canid_alphaherpesvirus	49.5	4.6e-55
AZT67395.1|1174692_1175076_+	autonomous glycyl radical cofactor GrcA	NA	Q7Y524	Enterobacteria_phage	74.0	6.1e-33
AZT67396.1|1175137_1175725_-	cysteine/O-acetylserine transporter	NA	NA	NA	NA	NA
AZT67397.1|1175827_1176727_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZT67398.1|1176744_1178079_-	ATP-dependent RNA helicase SrmB	NA	A0A1B1IS59	uncultured_Mediterranean_phage	29.7	1.6e-43
AZT67399.1|1178209_1178947_+|tRNA	tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase	tRNA	NA	NA	NA	NA
AZT67400.1|1178931_1180554_-	L-aspartate oxidase	NA	NA	NA	NA	NA
AZT67401.1|1180638_1180818_+	hypothetical protein	NA	NA	NA	NA	NA
AZT67402.1|1180817_1180982_+	rpoE leader peptide RseD	NA	NA	NA	NA	NA
AZT67403.1|1180978_1181554_+	RNA polymerase sigma factor RpoE	NA	NA	NA	NA	NA
AZT67404.1|1181585_1182236_+	anti-sigma-E factor RseA	NA	NA	NA	NA	NA
AZT67405.1|1182235_1183192_+	sigma-E factor regulatory protein RseB	NA	NA	NA	NA	NA
AZT70387.1|1183696_1183813_+	transcriptional regulator	NA	NA	NA	NA	NA
AZT67406.1|1184164_1185394_+	DUF4102 domain-containing protein	NA	H6WRW7	Salmonella_phage	94.4	2.9e-233
AZT67407.1|1185371_1185656_-	excisionase Xis	NA	H6WRW8	Salmonella_phage	86.2	3.1e-42
AZT67408.1|1185696_1185936_-	DUF4060 family protein	NA	S4TR31	Salmonella_phage	100.0	2.0e-37
AZT67409.1|1186653_1186977_+	DUF1367 family protein	NA	A0A0U2RT94	Escherichia_phage	66.4	5.7e-32
AZT67410.1|1186973_1187168_+	hypothetical protein	NA	S4TNP0	Salmonella_phage	61.5	6.1e-13
AZT70388.1|1187164_1187446_+	DUF1364 family protein	NA	K7P7Q1	Enterobacteria_phage	78.0	8.2e-35
AZT67411.1|1187442_1187997_+	DUF1133 family protein	NA	A0A0U2S606	Escherichia_phage	64.6	2.8e-63
AZT67412.1|1187942_1188134_-	hypothetical protein	NA	NA	NA	NA	NA
AZT67413.1|1188981_1189407_+	subtilase cytotoxin subunit B-like protein	NA	NA	NA	NA	NA
AZT67414.1|1189465_1189639_+	hypothetical protein	NA	Q9MBZ5	Enterobacteria_phage	57.9	5.8e-07
AZT67415.1|1189844_1190759_+	hypothetical protein	NA	NA	NA	NA	NA
AZT67416.1|1191453_1191636_-	type II toxin-antitoxin system HicA family toxin	NA	NA	NA	NA	NA
AZT67417.1|1191828_1192218_+	hypothetical protein	NA	K7PHB9	Enterobacterial_phage	71.8	1.4e-40
AZT67418.1|1192204_1192486_+|holin	phage holin family protein	holin	K7PKN9	Enterobacterial_phage	78.5	3.7e-35
AZT67419.1|1192485_1193100_+	glycoside hydrolase family 19 protein	NA	Q8HA86	Salmonella_phage	83.8	9.7e-97
AZT67420.1|1193096_1193576_+|lysis	lysis protein	lysis	A0A0M4RD57	Salmonella_phage	73.8	5.3e-50
AZT67421.1|1193815_1194217_-	inhibitor of g-type lysozyme	NA	NA	NA	NA	NA
AZT67422.1|1194502_1195048_+|terminase	terminase small subunit	terminase	A0A0U2S671	Escherichia_phage	79.9	1.9e-56
AZT67423.1|1195019_1196951_+|terminase	phage terminase large subunit family protein	terminase	A0A0K2FJ14	Enterobacteria_phage	65.6	8.2e-259
AZT67424.1|1196934_1197138_+|tail	phage tail protein	tail	K7PM10	Enterobacteria_phage	73.8	1.9e-17
AZT67425.1|1199388_1199808_+|tail	phage tail protein	tail	Q9G0F3	Phage_Gifsy-1	100.0	8.5e-52
>prophage 2
CP034723	Salmonella enterica subsp. enterica serovar Stanleyville strain RSE01 chromosome, complete genome	4693269	1411720	1442975	4693269	protease,transposase,capsid,integrase	Salmonella_virus(23.08%)	32	1424452:1424511	1442981:1444222
AZT67585.1|1411720_1412179_+|transposase	IS200/IS605-like element IS200F family transposase	transposase	I4AZI8	Saccharomonospora_phage	31.5	1.0e-13
AZT67586.1|1412878_1414117_+	alanine transaminase	NA	NA	NA	NA	NA
AZT70393.1|1414166_1414238_-	membrane protein YpdK	NA	NA	NA	NA	NA
AZT67587.1|1414640_1415561_-	kdo(2)-lipid IV(A) palmitoleoyltransferase	NA	A0A1W6JP29	Morganella_phage	53.5	1.1e-75
AZT67588.1|1416082_1416325_+	DUF2545 family protein	NA	NA	NA	NA	NA
AZT67589.1|1416598_1417990_-	phosphoglycerate transporter PgtP	NA	NA	NA	NA	NA
AZT70395.1|1418163_1418382_+	hypothetical protein	NA	NA	NA	NA	NA
AZT70394.1|1418425_1419619_+	phosphoglycerate transport regulator PgtC	NA	NA	NA	NA	NA
AZT67590.1|1419615_1421622_+	two-component system sensor histidine kinase PgtB	NA	NA	NA	NA	NA
AZT70396.1|1421611_1422859_+	two-component system response regulator PgtA	NA	NA	NA	NA	NA
AZT67591.1|1423126_1424065_+|protease	omptin family outer membrane protease PgtE	protease	NA	NA	NA	NA
AZT70397.1|1424250_1424454_+	hypothetical protein	NA	A0A1R3Y5S2	Salmonella_virus	68.6	6.2e-08
1424452:1424511	attL	TGATCCTACCCGTGAATAGTGGACACGGGACTAAGTGAGTAAACTCTCAACCAGAGGTGA	NA	NA	NA	NA
AZT67592.1|1424516_1425666_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	42.3	6.8e-51
AZT67593.1|1425731_1425875_+	hypothetical protein	NA	A0A1R3Y5S2	Salmonella_virus	82.9	1.7e-12
AZT67594.1|1426864_1428787_-	acyltransferase	NA	A0A1R3Y5Q6	Salmonella_virus	77.3	5.6e-300
AZT67595.1|1428804_1429059_-	glycosyltransferase	NA	A8CG95	Salmonella_phage	79.5	3.1e-25
AZT67596.1|1429027_1429417_-	GtrA family protein	NA	A0A192Y6N5	Salmonella_phage	85.6	1.1e-50
AZT67597.1|1430702_1430963_-	Txe/YoeB family addiction module toxin	NA	NA	NA	NA	NA
AZT67598.1|1430962_1431208_-	type II toxin-antitoxin system prevent-host-death family antitoxin	NA	NA	NA	NA	NA
AZT67599.1|1431545_1432124_-	hypothetical protein	NA	NA	NA	NA	NA
AZT67600.1|1432232_1432493_+	transcriptional regulator	NA	F1BUM8	Cronobacter_phage	66.3	9.3e-25
AZT67601.1|1432504_1432855_-	hypothetical protein	NA	NA	NA	NA	NA
AZT67602.1|1436188_1436458_-	Derepression protein	NA	Q7M2A0	Enterobacteria_phage	50.8	6.7e-10
AZT67603.1|1436546_1436954_-	hypothetical protein	NA	NA	NA	NA	NA
AZT67604.1|1436946_1437369_-	hypothetical protein	NA	NA	NA	NA	NA
AZT67605.1|1437361_1437565_-	host cell division inhibitor Icd-like protein	NA	NA	NA	NA	NA
AZT67606.1|1437757_1437943_+	hypothetical protein	NA	NA	NA	NA	NA
AZT67607.1|1438158_1439166_-|capsid	major capsid protein	capsid	F1BUM2	Cronobacter_phage	45.4	8.0e-64
AZT67608.1|1439175_1439934_-	hypothetical protein	NA	NA	NA	NA	NA
AZT67609.1|1440083_1440302_-	AlpA family transcriptional regulator	NA	NA	NA	NA	NA
AZT67610.1|1440775_1441798_-|integrase	integrase	integrase	B7SYF8	Stenotrophomonas_phage	38.1	2.4e-52
AZT67611.1|1441824_1442975_-|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	42.3	6.8e-51
1442981:1444222	attR	TCACCTCTGGTTGAGAGTTTACTCACTTAGTCCCGTGTCCACTATTCACGGGTAGGATCACAATGCCTTTAGCAAGATCTGCCAGGTAAGCATCGCGGGCGGCGCGTGCATCGGCTAGGGACATGATCGGGTATTTACCCAACGCGCGGGTCGTTTCTTTGCCATTAATCACTTTCCTGAAACGCCAGTACCGGGAACCGTTTGGATCTATCCAGCAATACAACCCGTTACCGTCACTTAGTTTGATTATCTTCCCGTTCTCAGTATCTGGCTTCGTTTTGCGTATTTTGGTATCGGTCAGCTTCATACTTGCCTCATCACAAACGGGTACAAATTACCATCGAACCGGGTATACCCGCTTTTATACCCGCTTTAAGTTTATCTTAGGTGACAAGTAATGACTTTAGTTAAGGCTGCTATAGAATGTTTTTGATTGATTTATAAGGTTTTTTCAGACTTTATGACAGGAGGTGAAAAGCGGTAGGATTGTCCCCTGCAGGAATCGAACCTGCAACTAGCCCTTAGGAGGGGCTCGTTATATCCATTTAACTAAGGGGACAACGCGGCGCCAGTATAGCGTTTTTTATTCGCCGGAGTAAGTGTAGCGCCGCCTGACTGGTTAAACCGTCGCCACTCAGCTCTGTTTTTCCGCTTTTTTCCGCTCCCGTTCCAGGCGCTCGCCGCGTAGCCTCGCTTCTTCCTTACGCTTATTGCTCATATCGTTGCGGATCTGCGCGTGGCTCATCAATGCGAAAATAAAAGTGCCGCCGCAGATATTTCCGGCAAGTGTGGGAAGGGCGAAGGGCCAGAGAAAGTCGCTCCAGGGCAGCGTGCCGTTGAAAACCAAATACAAAATTTCAACGGAACCGACGACAATATGGGTGGTATCGCCCAGCGCGATAAGCCAGGTCATCAAAATAATGACCACAATCTTTGCCCCGCCTGCTGCAGGAAACATCCATACCATTGTGGCGATGATCCAGCCAGAGATAATCGCGTTGGCAAACATCTCCGTTGGGCTATTTTTCATGACCTCCATACCAATTTTGACAAAGGCGTCGCGGGTCTCTTCATCAAATATAGGCATATATTCAAATGCCCACGCCGCAACCCCGGTGCCAATAAGGTTGCCCAATAAGACTACGCCCCACAAGCGCATCAGCAGGCCAACGTTACTCAGAGTGGGATTTTGCATTACCGGCAATACGGCGGTAACGGTATTTTCAGTAAATAATTGCTGGC	NA	NA	NA	NA
>prophage 3
CP034723	Salmonella enterica subsp. enterica serovar Stanleyville strain RSE01 chromosome, complete genome	4693269	1682922	1692093	4693269	tRNA	Enterobacteria_phage(66.67%)	10	NA	NA
AZT67809.1|1682922_1683870_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.2	1.7e-23
AZT67810.1|1683853_1684585_+	ABC transporter permease	NA	NA	NA	NA	NA
AZT67811.1|1684565_1684673_-	protein YohO	NA	NA	NA	NA	NA
AZT67812.1|1684732_1685464_-	HTH-type transcriptional regulator MlrA	NA	Q9EYF2	Enterobacteria_phage	87.9	4.5e-101
AZT67813.1|1685686_1687372_+	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	91.3	4.8e-279
AZT67814.1|1687368_1688088_+	two-component system response regulator YehT	NA	NA	NA	NA	NA
AZT67815.1|1688134_1688602_+	DUF1456 family protein	NA	Q9EYF4	Enterobacteria_phage	90.3	3.9e-74
AZT67816.1|1688658_1689189_-	DUF1307 domain-containing protein	NA	NA	NA	NA	NA
AZT67817.1|1689360_1689819_-	DUF1307 domain-containing protein	NA	Q9EYF5	Enterobacteria_phage	72.5	8.4e-53
AZT67818.1|1690059_1692093_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SDF2	Indivirus	27.6	1.0e-54
>prophage 4
CP034723	Salmonella enterica subsp. enterica serovar Stanleyville strain RSE01 chromosome, complete genome	4693269	1759486	1769990	4693269		Enterobacteria_phage(37.5%)	10	NA	NA
AZT67866.1|1759486_1760890_+	colanic acid biosynthesis protein WcaM	NA	A0A291LBB9	Klebsiella_phage	26.5	2.3e-21
AZT67867.1|1761067_1761961_+	GalU regulator GalF	NA	A0A127AW70	Bacillus_phage	42.2	4.8e-44
AZT67868.1|1762336_1763422_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	53.6	2.3e-101
AZT67869.1|1763421_1764321_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	36.3	1.4e-30
AZT67870.1|1764368_1765226_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	65.4	5.0e-107
AZT67871.1|1765246_1765798_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	58.0	1.3e-52
AZT67872.1|1765803_1766796_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA	NA
AZT67873.1|1766792_1767566_+	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
AZT67874.1|1767570_1768650_+	CDP-glucose 4,6-dehydratase	NA	A0A222YY99	Synechococcus_phage	24.5	1.7e-16
AZT67875.1|1768676_1769990_+	lipopolysaccharide biosynthesis protein RfbH	NA	H8ZJ36	Ostreococcus_tauri_virus	35.1	7.0e-52
>prophage 5
CP034723	Salmonella enterica subsp. enterica serovar Stanleyville strain RSE01 chromosome, complete genome	4693269	1852807	1876103	4693269	plate,integrase,transposase,tail	Salmonella_phage(22.22%)	27	1854384:1854443	1872725:1872786
AZT67946.1|1852807_1853098_-	DUF4102 domain-containing protein	NA	H2BDA3	Pseudomonas_phage	49.1	1.2e-07
AZT67947.1|1853469_1854267_-	DgsA anti-repressor MtfA	NA	NA	NA	NA	NA
1854384:1854443	attL	CGGTCTCGAAAACCGGAGTAGGGGCAACTCTACCGGGGGTTCAAATCCCCCTCTCTCCGC	NA	NA	NA	NA
AZT67948.1|1854511_1855369_-|integrase	integrase	integrase	A0A192Y7M7	Salmonella_phage	61.6	2.2e-91
AZT67949.1|1855362_1855911_+	hypothetical protein	NA	A5LH27	Enterobacteria_phage	70.1	3.6e-26
AZT67950.1|1855903_1856521_+|plate	phage baseplate assembly protein V	plate	Q9JML8	Wolbachia_phage	36.2	3.9e-13
AZT67951.1|1856559_1858029_+|tail	phage tail protein	tail	R9TMQ0	Vibrio_phage	37.5	3.0e-75
AZT67952.1|1858025_1858532_+|tail	phage tail protein	tail	NA	NA	NA	NA
AZT67953.1|1858590_1858890_+|tail	phage tail assembly protein	tail	Q75QK8	Wolbachia_phage	31.6	1.9e-05
AZT67954.1|1860552_1860768_+|tail	phage tail protein	tail	R9TR63	Vibrio_phage	51.4	9.7e-12
AZT67955.1|1860769_1861888_+	late control protein D	NA	R9TNM7	Vibrio_phage	32.8	7.3e-34
AZT67956.1|1861927_1862281_+|plate	baseplate assembly protein	plate	R9TRM1	Vibrio_phage	54.1	6.5e-21
AZT67957.1|1862264_1863185_+|plate	baseplate assembly protein	plate	A0A088FQL4	Escherichia_phage	49.2	1.7e-65
AZT67958.1|1863174_1863738_+|tail	phage tail protein I	tail	A0A193GYD1	Enterobacter_phage	39.7	2.0e-27
AZT67959.1|1863730_1865359_+|tail	phage tail protein	tail	A0A0M3ULH6	Salmonella_phage	39.3	4.2e-38
AZT67960.1|1865361_1865877_+|tail	tail fiber assembly protein	tail	A0A1S6KZZ1	Salmonella_phage	31.3	8.1e-12
AZT67961.1|1865971_1866265_+	hypothetical protein	NA	NA	NA	NA	NA
AZT67962.1|1866266_1866707_+|tail	tail fiber assembly protein	tail	A0A0F7LDZ0	Escherichia_phage	45.8	1.5e-27
AZT67963.1|1866766_1868596_-	acyltransferase	NA	C6ZR20	Salmonella_phage	29.3	1.5e-60
AZT67964.1|1868934_1869177_-	DinI family protein	NA	Q6UAW0	Klebsiella_phage	75.3	7.6e-29
AZT67965.1|1869450_1870600_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	42.3	6.8e-51
AZT67966.1|1871479_1871668_+	hypothetical protein	NA	NA	NA	NA	NA
AZT67967.1|1871892_1872564_-	SOS response-associated peptidase	NA	A0A2H4J5W2	uncultured_Caudovirales_phage	60.9	4.8e-81
AZT67968.1|1872598_1872787_-	hypothetical protein	NA	NA	NA	NA	NA
1872725:1872786	attR	CGGTCTCGAAAACCGGAGTAGGGGCAACTCTACCGGGGGTTCAAATCCCCCTCTCTCCGCCA	NA	NA	NA	NA
AZT67969.1|1872821_1873004_+	hypothetical protein	NA	NA	NA	NA	NA
AZT67970.1|1873396_1873774_+	hypothetical protein	NA	NA	NA	NA	NA
AZT67971.1|1873800_1874619_+	hypothetical protein	NA	NA	NA	NA	NA
AZT70414.1|1875080_1876103_+|transposase	IS110-like element ISSaen1 family transposase	transposase	NA	NA	NA	NA
>prophage 6
CP034723	Salmonella enterica subsp. enterica serovar Stanleyville strain RSE01 chromosome, complete genome	4693269	1940271	2038161	4693269	transposase,integrase,tRNA,tail	Enterobacteria_phage(25.58%)	106	1975725:1975741	2021705:2021721
AZT68037.1|1940271_1941526_+|transposase	IS3-like element ISSen1 family transposase	transposase	Q6H9S3	Enterobacteria_phage	34.5	2.2e-18
AZT68038.1|1944075_1944435_+	purine nucleoside phosphoramidase	NA	NA	NA	NA	NA
AZT68039.1|1944437_1944812_+	DUF1425 domain-containing protein	NA	NA	NA	NA	NA
AZT68040.1|1944825_1945464_+	penicillin-binding protein activator LpoB	NA	NA	NA	NA	NA
AZT68041.1|1945444_1946269_+	thiamine kinase	NA	NA	NA	NA	NA
AZT68042.1|1946279_1947305_+	beta-N-acetylhexosaminidase	NA	NA	NA	NA	NA
AZT68043.1|1947329_1947872_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZT68044.1|1948126_1949431_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZT68045.1|1949609_1950149_+	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
AZT68046.1|1950223_1950859_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZT68047.1|1951100_1951358_+	DUF1471 domain-containing protein	NA	A0A1B2IFR9	Erwinia_phage	37.1	2.1e-05
AZT68048.1|1951454_1952420_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA	NA
AZT68049.1|1956239_1957550_+	lipoprotein-releasing ABC transporter permease subunit LolC	NA	NA	NA	NA	NA
AZT68050.1|1957542_1958244_+	lipoprotein-releasing ABC transporter ATP-binding protein LolD	NA	G9BWD6	Planktothrix_phage	40.7	2.4e-35
AZT68051.1|1958243_1959488_+	lipoprotein-releasing ABC transporter permease subunit LolE	NA	NA	NA	NA	NA
AZT68052.1|1959516_1960428_+	N-acetylglucosamine kinase	NA	NA	NA	NA	NA
AZT68053.1|1960446_1961268_+	NAD-dependent protein deacylase	NA	A0A2I7S9Y2	Vibrio_phage	33.5	1.0e-21
AZT68054.1|1961349_1962387_-	spermidine/putrescine ABC transporter substrate-binding protein PotD	NA	NA	NA	NA	NA
AZT68055.1|1962419_1963199_-	spermidine/putrescine ABC transporter permease PotC	NA	NA	NA	NA	NA
AZT68056.1|1963514_1964525_-	type III secretion system effector SifA	NA	NA	NA	NA	NA
AZT68057.1|1964853_1965717_-	spermidine/putrescine ABC transporter permease	NA	Q6GZ02	Mycoplasma_phage	26.2	2.0e-10
AZT68058.1|1965700_1966837_-	spermidine/putrescine ABC transporter ATP-binding protein PotA	NA	G3M9Y6	Bacillus_virus	34.0	2.1e-28
AZT68059.1|1967087_1968317_+	peptidase T	NA	NA	NA	NA	NA
AZT68060.1|1968320_1969655_+	hypothetical protein	NA	NA	NA	NA	NA
AZT68061.1|1969694_1970816_-	cupin domain-containing protein	NA	NA	NA	NA	NA
AZT68062.1|1970896_1972360_-	two-component system sensor histidine kinase PhoQ	NA	NA	NA	NA	NA
AZT68063.1|1972359_1973034_-	two-component system response regulator PhoP	NA	NA	NA	NA	NA
AZT68064.1|1973157_1974528_-	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	45.3	1.1e-108
AZT68065.1|1974531_1975173_-	lysogenization regulator HflD	NA	NA	NA	NA	NA
AZT68066.1|1975259_1976366_-|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
1975725:1975741	attL	CAGATAGCGCCCTAAAA	NA	NA	NA	NA
AZT68067.1|1976419_1976881_-	NUDIX hydrolase	NA	NA	NA	NA	NA
AZT68068.1|1976892_1977222_-	DUF1311 domain-containing protein	NA	NA	NA	NA	NA
AZT68069.1|1977218_1977884_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA	NA
AZT68070.1|1978055_1979306_+	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	92.6	6.7e-20
AZT68071.1|1979420_1980563_-|integrase	integrase	integrase	O21929	Phage_21	80.3	8.2e-174
AZT68072.1|1980552_1980789_-	excisionase	NA	NA	NA	NA	NA
AZT68073.1|1980838_1981342_-	Eaa protein	NA	A0A075B8H2	Enterobacteria_phage	92.3	6.0e-36
AZT68074.1|1981662_1981983_-	hypothetical protein	NA	A0A222YY67	Escherichia_phage	59.2	1.8e-33
AZT68075.1|1982018_1982849_-	recombination protein RecT	NA	A0A1P8DTF2	Proteus_phage	72.0	1.3e-104
AZT68076.1|1983005_1983311_+|tail	phage tail protein	tail	A5LH39	Enterobacteria_phage	59.2	7.3e-29
AZT68077.1|1983400_1983925_+	Ail/OmpX	NA	A0A1B0VBR9	Salmonella_phage	35.3	1.8e-19
AZT68078.1|1984014_1984548_-	superoxide dismutase [Cu-Zn]	NA	Q9MC02	Salmonella_phage	54.0	1.8e-46
AZT68079.1|1985447_1985786_-|tail	phage tail assembly protein T	tail	A5LH37	Enterobacteria_phage	62.4	1.3e-31
AZT68080.1|1985782_1986178_-|tail	phage minor tail protein G	tail	A5LH36	Enterobacteria_phage	56.5	5.0e-30
AZT68081.1|1987777_1988128_-	DNA breaking-rejoining protein	NA	S4TSN6	Salmonella_phage	95.7	5.4e-60
AZT68082.1|1988149_1988308_-	hypothetical protein	NA	H6WRX3	Salmonella_phage	98.1	9.0e-23
AZT68083.1|1988706_1988913_+	hypothetical protein	NA	K7P7I0	Enterobacteria_phage	69.1	9.6e-17
AZT68084.1|1988948_1989776_-	DUF3037 domain-containing protein	NA	NA	NA	NA	NA
AZT68085.1|1989772_1990522_-	hypothetical protein	NA	NA	NA	NA	NA
AZT68086.1|1990672_1991140_-	helix-turn-helix domain-containing protein	NA	K7PHG0	Enterobacteria_phage	83.9	3.9e-66
AZT68087.1|1991153_1991381_+	Rha family transcriptional regulator	NA	K7PKS2	Enterobacteria_phage	95.9	1.5e-34
AZT70418.1|1991346_1991721_+	hypothetical protein	NA	S4TTD7	Salmonella_phage	98.4	3.3e-63
AZT68088.1|1992237_1993492_+|transposase	IS3-like element ISSen1 family transposase	transposase	Q6H9S3	Enterobacteria_phage	34.5	2.2e-18
AZT68089.1|1993516_1993882_+	hypothetical protein	NA	H6WRX7	Salmonella_phage	54.3	2.3e-37
AZT68090.1|1993878_1994148_+|integrase	integrase	integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	53.5	1.5e-17
AZT68091.1|1995101_1995902_+	hypothetical protein	NA	NA	NA	NA	NA
AZT68092.1|1996549_1997320_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
AZT68093.1|1997755_1997941_+	hypothetical protein	NA	NA	NA	NA	NA
AZT68094.1|1998031_1998607_-|tail	tail fiber assembly protein	tail	A0A0M4RTP2	Salmonella_phage	86.2	1.5e-91
AZT68095.1|2000059_2001691_+|tail	phage tail protein	tail	A0A1B0VFW4	Salmonella_phage	65.5	9.7e-152
AZT68096.1|2001705_2002224_+|tail	phage tail protein	tail	A0A0U2QV64	Escherichia_phage	51.4	2.5e-45
AZT70419.1|2002861_2003194_-|tail	tail assembly chaperone	tail	A0A1B0VCD0	Salmonella_phage	66.2	1.7e-18
AZT68097.1|2003339_2005346_+	E3 ubiquitin--protein ligase	NA	Q9MBL9	Phage_Gifsy-2	79.6	1.5e-61
AZT68098.1|2005656_2006328_-	SOS response-associated peptidase	NA	A0A2H4J5W2	uncultured_Caudovirales_phage	61.3	1.8e-80
AZT70420.1|2006581_2006794_+	isocitrate dehydrogenase	NA	Q77Z09	Phage_21	92.6	1.5e-20
AZT68099.1|2007240_2008365_+	DUF3626 domain-containing protein	NA	NA	NA	NA	NA
AZT68100.1|2009413_2009827_+	subtilase cytotoxin subunit B	NA	A0A0U2KD34	Escherichia_phage	38.6	3.2e-19
AZT68101.1|2009843_2010572_+	pertussis-like toxin subunit ArtA	NA	A0A0U2KD26	Escherichia_phage	52.0	1.0e-60
AZT68102.1|2010763_2011306_+	hypothetical protein	NA	A0A0U2S643	Escherichia_phage	66.5	2.3e-70
AZT68103.1|2011454_2011832_-	DUF1353 domain-containing protein	NA	I1TQ41	Pseudomonas_phage	38.4	2.2e-14
AZT70421.1|2011904_2012723_-	cytolethal distending toxin subunit B family protein	NA	A5LH53	Enterobacteria_phage	50.4	1.9e-63
AZT68104.1|2013596_2013836_-	virulence protein MsgA	NA	K7P6H1	Enterobacteria_phage	88.6	8.5e-33
AZT68105.1|2014016_2014538_-	lipoprotein EnvE	NA	NA	NA	NA	NA
AZT68106.1|2014953_2015166_-	cold shock-like protein CspF	NA	NA	NA	NA	NA
AZT68107.1|2015297_2015561_-	virulence factor	NA	NA	NA	NA	NA
AZT68108.1|2015609_2015801_+	hypothetical protein	NA	NA	NA	NA	NA
AZT68109.1|2016368_2016926_+	virulence membrane protein PagC	NA	Q9LA63	Enterobacterial_phage	33.0	2.2e-15
AZT68110.1|2017922_2018123_+	hypothetical protein	NA	NA	NA	NA	NA
AZT68111.1|2018162_2018507_-	c-type lysozyme inhibitor	NA	NA	NA	NA	NA
AZT68112.1|2018884_2019010_+	hypothetical protein	NA	NA	NA	NA	NA
AZT68113.1|2019209_2019434_+	hypothetical protein	NA	NA	NA	NA	NA
AZT68114.1|2019631_2020102_+	Hsp20 family protein	NA	NA	NA	NA	NA
AZT68115.1|2020210_2020399_-	hypothetical protein	NA	NA	NA	NA	NA
AZT68116.1|2020440_2021484_+	hypothetical protein	NA	NA	NA	NA	NA
AZT68117.1|2021566_2022097_-	cytochrome b	NA	A0A0U2QLA7	Escherichia_phage	70.5	2.8e-36
2021705:2021721	attR	TTTTAGGGCGCTATCTG	NA	NA	NA	NA
AZT68118.1|2022244_2022559_-	hypothetical protein	NA	NA	NA	NA	NA
AZT68119.1|2023240_2024875_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZT70422.1|2024874_2025849_+	ABC transporter permease	NA	NA	NA	NA	NA
AZT68120.1|2025838_2026651_+	ABC transporter permease	NA	NA	NA	NA	NA
AZT68121.1|2026644_2027442_+	ATP-binding cassette domain-containing protein	NA	A0A2R8FG22	Brazilian_cedratvirus	31.2	2.8e-11
AZT68122.1|2027435_2028026_+	ATP-binding cassette domain-containing protein	NA	NA	NA	NA	NA
AZT68123.1|2028107_2029241_-	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
AZT68124.1|2029434_2029761_+	four-helix bundle copper-binding protein	NA	NA	NA	NA	NA
AZT68125.1|2029954_2030605_+	metal-binding protein ZinT	NA	NA	NA	NA	NA
AZT70423.1|2031645_2032239_+	LuxR family transcriptional regulator	NA	NA	NA	NA	NA
AZT68126.1|2032307_2033156_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
AZT68127.1|2033410_2033659_-	histidine kinase	NA	NA	NA	NA	NA
AZT68128.1|2033974_2034520_+	chorismate mutase	NA	NA	NA	NA	NA
AZT68129.1|2034716_2035355_+	leucine efflux protein LeuE	NA	NA	NA	NA	NA
AZT68130.1|2035371_2035557_-	hypothetical protein	NA	NA	NA	NA	NA
AZT68131.1|2035527_2035890_+	DUF1971 domain-containing protein	NA	NA	NA	NA	NA
AZT68132.1|2035892_2036075_+	DUF1869 domain-containing protein	NA	NA	NA	NA	NA
AZT68133.1|2036304_2036946_+	hypothetical protein	NA	NA	NA	NA	NA
AZT68134.1|2037066_2037252_+	hypothetical protein	NA	NA	NA	NA	NA
AZT68135.1|2037259_2037508_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
AZT68136.1|2037702_2038161_+|transposase	IS200/IS605-like element IS200F family transposase	transposase	I4AZI8	Saccharomonospora_phage	31.5	1.0e-13
>prophage 7
CP034723	Salmonella enterica subsp. enterica serovar Stanleyville strain RSE01 chromosome, complete genome	4693269	2853123	2986567	4693269	transposase,protease,tRNA,integrase,tail	Salmonella_phage(16.67%)	107	2931855:2931871	2981134:2981150
AZT68871.1|2853123_2853804_+|protease	type III secretion system effector protease PipA	protease	Q9MBM0	Phage_Gifsy-2	72.0	2.3e-83
AZT68872.1|2854422_2855082_+|protease	FtsH protease modulator YccA	protease	A0A2H4JFM9	uncultured_Caudovirales_phage	52.4	2.7e-44
AZT68873.1|2855168_2855498_+	sulfurtransferase TusE	NA	NA	NA	NA	NA
AZT68874.1|2855494_2855776_-	acylphosphatase	NA	NA	NA	NA	NA
AZT68875.1|2856395_2857546_-|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	42.3	6.8e-51
AZT68876.1|2857729_2858278_-	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA	NA
AZT68877.1|2858492_2859704_+	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA	NA	NA	NA	NA
AZT68878.1|2859761_2860079_+	heat-shock protein HspQ	NA	NA	NA	NA	NA
AZT68879.1|2860123_2860540_-	CoA-binding protein	NA	NA	NA	NA	NA
AZT68880.1|2860710_2861373_+	DUF2057 family protein	NA	NA	NA	NA	NA
AZT68881.1|2861467_2861926_+	methylglyoxal synthase	NA	NA	NA	NA	NA
AZT68882.1|2861961_2864016_-	DNA helicase IV	NA	A7KV33	Bacillus_phage	27.6	6.5e-20
AZT68883.1|2864139_2864586_+	YccF domain-containing protein	NA	NA	NA	NA	NA
AZT68884.1|2866743_2867349_-	TfoX family DNA transformation protein	NA	NA	NA	NA	NA
AZT68885.1|2867565_2868075_+	cell division inhibitor SulA	NA	NA	NA	NA	NA
AZT68886.1|2868431_2869478_+	porin OmpA	NA	NA	NA	NA	NA
AZT68887.1|2869549_2870002_-	macrodomain Ter protein MatP	NA	NA	NA	NA	NA
AZT68888.1|2870187_2871948_+|protease	Lon protease family protein	protease	NA	NA	NA	NA
AZT68889.1|2872016_2872535_+	bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase	NA	NA	NA	NA	NA
AZT68890.1|2872634_2872802_-	ribosome modulation factor	NA	NA	NA	NA	NA
AZT68891.1|2873057_2873621_-	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
AZT68892.1|2873617_2875258_-	intermembrane transport protein PqiB	NA	NA	NA	NA	NA
AZT68893.1|2875262_2876516_-	membrane integrity-associated transporter subunit PqiA	NA	NA	NA	NA	NA
AZT68894.1|2876530_2878438_-	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	29.8	2.4e-53
AZT68895.1|2878450_2880559_-	bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA	NA	NA	NA	NA
AZT68896.1|2880657_2881767_+	MOSC domain-containing protein	NA	NA	NA	NA	NA
AZT68897.1|2881763_2882306_-	cell division protein ZapC	NA	NA	NA	NA	NA
AZT68898.1|2883688_2886301_-	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	22.6	4.8e-20
AZT70452.1|2886727_2886919_+	DinI family protein	NA	S4TNM0	Salmonella_phage	95.2	6.2e-26
AZT68899.1|2887189_2887876_+	virulence protein	NA	NA	NA	NA	NA
AZT68900.1|2887860_2888160_+	hypothetical protein	NA	NA	NA	NA	NA
AZT68901.1|2888228_2888855_+	SOS response-associated peptidase	NA	A0A2H4J5W2	uncultured_Caudovirales_phage	63.2	1.4e-66
AZT70453.1|2889502_2890270_-	pathogenicity island 2 effector protein SseI	NA	Q9MBL9	Phage_Gifsy-2	99.2	1.0e-148
AZT68902.1|2890945_2891527_-|tail	tail fiber assembly protein	tail	A0A0M4RTP2	Salmonella_phage	89.5	1.7e-95
AZT68903.1|2891526_2893965_-|tail	phage tail protein	tail	A0A0K2FIZ6	Escherichia_phage	63.4	3.7e-91
AZT68904.1|2894018_2894261_-	hypothetical protein	NA	NA	NA	NA	NA
AZT70454.1|2894299_2894506_-	host specificity protein	NA	NA	NA	NA	NA
AZT68905.1|2894559_2895054_-	hypothetical protein	NA	NA	NA	NA	NA
AZT68906.1|2895040_2895295_-	XRE family transcriptional regulator	NA	K7PKH4	Enterobacteria_phage	60.9	5.3e-17
AZT68907.1|2895393_2895792_+	helix-turn-helix domain-containing protein	NA	K7PH19	Enterobacteria_phage	56.0	1.2e-18
AZT68908.1|2896088_2896244_+	DUF1391 domain-containing protein	NA	M4QQ57	Salicola_phage	55.3	8.0e-08
AZT68909.1|2897179_2897464_+	hypothetical protein	NA	K7PGY4	Enterobacteria_phage	53.2	1.7e-08
AZT68910.1|2897538_2897859_+	hypothetical protein	NA	NA	NA	NA	NA
AZT68911.1|2897855_2899111_-|transposase	IS3-like element ISSen1 family transposase	transposase	Q6H9S3	Enterobacteria_phage	34.5	2.2e-18
AZT68912.1|2899326_2902506_+	DNA breaking-rejoining protein	NA	S4TNL0	Salmonella_phage	69.0	0.0e+00
AZT68913.1|2902468_2903626_+	enterohemolysin	NA	S4TTE8	Salmonella_phage	100.0	1.6e-217
AZT68914.1|2903668_2903908_+	DUF4060 family protein	NA	S4TR31	Salmonella_phage	100.0	2.0e-37
AZT68915.1|2903948_2904197_+	excisionase	NA	S4TND0	Salmonella_phage	100.0	4.7e-42
AZT68916.1|2904241_2905534_+	DUF3596 domain-containing protein	NA	S4TSP2	Salmonella_phage	100.0	3.4e-253
AZT68917.1|2905728_2906931_+	nicotinate phosphoribosyltransferase	NA	NA	NA	NA	NA
AZT68918.1|2908690_2909905_-	diaminopropionate ammonia-lyase	NA	NA	NA	NA	NA
AZT68919.1|2909991_2910225_+	hypothetical protein	NA	NA	NA	NA	NA
AZT68920.1|2910221_2910683_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
AZT68921.1|2910883_2912284_+|tRNA	asparagine--tRNA ligase	tRNA	A0A167RLM0	Powai_lake_megavirus	35.1	4.5e-81
AZT68922.1|2912889_2913981_+	porin OmpF	NA	Q1MVN1	Enterobacteria_phage	51.7	1.7e-99
AZT68923.1|2914165_2915356_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
AZT68924.1|2915417_2916065_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
AZT68925.1|2916092_2916641_-	DUF882 domain-containing protein	NA	A0A0K1LKR7	Rhodobacter_phage	33.7	1.2e-05
AZT68926.1|2918985_2919186_-	hypothetical protein	NA	NA	NA	NA	NA
AZT68927.1|2919091_2923558_-	chromosome partition protein MukB	NA	NA	NA	NA	NA
AZT68928.1|2923557_2924262_-	chromosome partition protein MukE	NA	NA	NA	NA	NA
AZT68929.1|2924242_2925565_-	chromosome partition protein MukF	NA	NA	NA	NA	NA
AZT68930.1|2925557_2926361_-|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	tRNA	NA	NA	NA	NA
AZT68931.1|2926496_2927273_+	envelope biogenesis factor ElyC	NA	NA	NA	NA	NA
AZT68932.1|2928355_2929102_-	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
AZT68933.1|2929098_2929281_-	protein YcaR	NA	NA	NA	NA	NA
AZT68934.1|2929332_2930565_-	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
2931855:2931871	attL	GCGATCGCGATACGCTG	NA	NA	NA	NA
AZT68935.1|2933365_2935630_-	ComEC family protein	NA	Q332C0	Clostridium_botulinum_C_phage	22.1	3.3e-09
AZT68936.1|2935806_2937062_-|transposase	IS3-like element ISSen1 family transposase	transposase	Q6H9S3	Enterobacteria_phage	34.5	2.2e-18
AZT68937.1|2937174_2937459_-	integration host factor subunit beta	NA	A7KV42	Bacillus_phage	40.2	4.1e-10
AZT68938.1|2937614_2939288_-	30S ribosomal protein S1	NA	NA	NA	NA	NA
AZT68939.1|2939401_2940085_-	(d)CMP kinase	NA	NA	NA	NA	NA
AZT68940.1|2940257_2941019_-|protease	metalloprotease	protease	NA	NA	NA	NA
AZT68941.1|2941161_2942445_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
AZT68942.1|2943788_2944481_-	DUF421 domain-containing protein	NA	NA	NA	NA	NA
AZT68943.1|2944617_2946378_+	30S ribosomal protein S12 methylthiotransferase accessory protein YcaO	NA	NA	NA	NA	NA
AZT68944.1|2946782_2947640_+	formate transporter FocA	NA	NA	NA	NA	NA
AZT68945.1|2947699_2949982_+	formate C-acetyltransferase	NA	A0A2P0VNR5	Tetraselmis_virus	42.0	1.1e-161
AZT68946.1|2950057_2951017_-	SPI-2 type III secretion system effector SopD2	NA	NA	NA	NA	NA
AZT68947.1|2951147_2951474_+	cytoplasmic protein	NA	NA	NA	NA	NA
AZT68948.1|2951565_2952390_+	pyruvate formate lyase 1-activating protein	NA	A0A2P0VNQ0	Tetraselmis_virus	26.5	2.8e-22
AZT68949.1|2952682_2954104_-	amino acid permease	NA	NA	NA	NA	NA
AZT68950.1|2954321_2955470_-	MFS transporter	NA	NA	NA	NA	NA
AZT68951.1|2955817_2956681_-	dimethyl sulfoxide reductase anchor subunit	NA	NA	NA	NA	NA
AZT68952.1|2956682_2957300_-	dimethylsulfoxide reductase subunit B	NA	A0A077SL61	Escherichia_phage	59.6	4.3e-76
AZT68953.1|2957310_2959755_-	dimethylsulfoxide reductase subunit A	NA	A0A077SK27	Escherichia_phage	50.5	5.4e-223
AZT68954.1|2961542_2962886_-	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	40.9	1.6e-80
AZT70455.1|2962895_2963507_-	outer membrane lipoprotein carrier protein LolA	NA	NA	NA	NA	NA
AZT68955.1|2963649_2967663_-	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	49.5	2.9e-88
AZT68956.1|2967797_2968292_-	leucine-responsive transcriptional regulator Lrp	NA	NA	NA	NA	NA
AZT68957.1|2968838_2969807_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	45.5	6.5e-63
AZT68958.1|2969921_2971688_+	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	NA	W8CYL7	Bacillus_phage	25.3	1.6e-22
AZT68959.1|2971688_2973410_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	NA	W8CYL7	Bacillus_phage	23.5	6.4e-13
AZT68960.1|2973454_2974159_+|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	tRNA	NA	NA	NA	NA
AZT68961.1|2974159_2974543_+	hypothetical protein	NA	NA	NA	NA	NA
AZT68962.1|2974470_2974689_+	translation initiation factor IF-1	NA	NA	NA	NA	NA
AZT68963.1|2974779_2975691_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZT68964.1|2975799_2976660_+	pirin family protein	NA	NA	NA	NA	NA
AZT68965.1|2976679_2977357_+	hydrolase	NA	NA	NA	NA	NA
AZT68966.1|2977693_2978948_+|transposase	IS3-like element ISSen1 family transposase	transposase	Q6H9S3	Enterobacteria_phage	34.5	2.2e-18
AZT68967.1|2979256_2979634_+|integrase	integrase	integrase	NA	NA	NA	NA
AZT68968.1|2979795_2979993_+	hypothetical protein	NA	NA	NA	NA	NA
AZT68969.1|2980203_2982480_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.3	6.2e-165
2981134:2981150	attR	CAGCGTATCGCGATCGC	NA	NA	NA	NA
AZT68970.1|2982510_2982831_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	4.5e-13
AZT68971.1|2983154_2983376_+	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.2	9.3e-18
AZT68972.1|2983505_2985452_-	macrolide ABC transporter ATP-binding protein/permease MacB	NA	G9BWD6	Planktothrix_phage	42.3	9.1e-40
AZT68973.1|2985448_2986567_-	macrolide transporter subunit MacA	NA	A0A140XAI1	Dickeya_phage	38.9	1.4e-08
>prophage 8
CP034723	Salmonella enterica subsp. enterica serovar Stanleyville strain RSE01 chromosome, complete genome	4693269	3609698	3637832	4693269	plate,transposase	Bradyrhizobium_phage(16.67%)	27	NA	NA
AZT69496.1|3609698_3611042_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
AZT69497.1|3611045_3611582_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
AZT69498.1|3611648_3612134_-	Hcp1 family type VI secretion system effector	NA	NA	NA	NA	NA
AZT69499.1|3612276_3612660_-	hypothetical protein	NA	NA	NA	NA	NA
AZT69500.1|3612644_3613130_-	hypothetical protein	NA	NA	NA	NA	NA
AZT70483.1|3614170_3614503_-	hypothetical protein	NA	NA	NA	NA	NA
AZT69501.1|3614629_3614740_-	hypothetical protein	NA	NA	NA	NA	NA
AZT69502.1|3614802_3616311_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
AZT69503.1|3616334_3616877_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
AZT69504.1|3619982_3620885_+	type VI secretion system-associated protein TagK	NA	NA	NA	NA	NA
AZT69505.1|3620871_3621696_+	impE family protein	NA	NA	NA	NA	NA
AZT69506.1|3621692_3622187_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
AZT69507.1|3622202_3624086_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
AZT69508.1|3624082_3625078_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
AZT69509.1|3625088_3626144_+	cytoplasmic protein	NA	NA	NA	NA	NA
AZT69510.1|3626673_3627405_-	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	39.9	6.4e-39
AZT69511.1|3627468_3627936_+	ribonuclease HI	NA	J9Q745	Salmonella_phage	58.9	4.7e-51
AZT69512.1|3627932_3628655_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AZT69513.1|3628689_3629445_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
AZT69514.1|3629516_3630884_+	murein transglycosylase D	NA	A0A0A7NU10	Lactobacillus_phage	33.0	1.4e-10
AZT69515.1|3630939_3631710_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AZT69516.1|3631787_3632588_-	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
AZT69517.1|3633998_3634913_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZT69518.1|3634934_3635738_-	2,5-didehydrogluconate reductase DkgB	NA	A0A1V0SDE7	Indivirus	35.4	3.2e-39
AZT69519.1|3635974_3636433_-|transposase	IS200/IS605-like element IS200F family transposase	transposase	I4AZI8	Saccharomonospora_phage	31.5	7.7e-14
AZT70484.1|3636389_3636626_-	hypothetical protein	NA	NA	NA	NA	NA
AZT69520.1|3636573_3637832_-|transposase	IS3 family transposase	transposase	Q6H9S3	Enterobacteria_phage	34.5	2.2e-18
>prophage 1
CP034724	Salmonella enterica subsp. enterica serovar Stanleyville strain RSE01 plasmid pRSE01, complete sequence	63881	43522	52081	63881	transposase,integrase	Shigella_phage(16.67%)	8	25186:25202	47715:47731
25186:25202	attL	TATCCATACTCCACCCG	NA	NA	NA	NA
AZT70542.1|43522_44726_+|transposase	IS3 family transposase	transposase	Q9ZXG3	Shigella_phage	70.8	1.1e-115
AZT70543.1|45412_45631_+	type II toxin-antitoxin system antitoxin CcdA	NA	NA	NA	NA	NA
AZT70544.1|45632_45938_+	type II toxin-antitoxin system toxin CcdB	NA	NA	NA	NA	NA
AZT70545.1|46246_47029_+|integrase	phage integrase family protein	integrase	I3WFA4	Macacine_betaherpesvirus	91.1	3.5e-51
AZT70546.1|47179_48121_-|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	Q2A0A7	Sodalis_phage	55.0	1.4e-73
47715:47731	attR	CGGGTGGAGTATGGATA	NA	NA	NA	NA
AZT70547.1|48546_49752_+	ParA family protein	NA	A0A077SL49	Escherichia_phage	69.6	1.4e-163
AZT70548.1|49748_50726_+	ParB/RepB/Spo0J family partition protein	NA	A0A1B0V750	Salmonella_phage	52.9	2.0e-83
AZT70549.1|50806_52081_-	translesion error-prone DNA polymerase V subunit UmuC	NA	F1C5A5	Cronobacter_phage	64.2	5.0e-156
