assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003994415.1_ASM399441v1	CP034689	Achromobacter spanius strain UQ283 chromosome, complete genome	1	735129-735259	1	CRISPRCasFinder	no		DEDDh,DinG,PD-DExK,csa3,WYL	Orphan	GATGGGTTGCGCGCGTTCGTGGATTGGGTTCTTTTGGCGG	40	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,PD-DExK,csa3,WYL	NA,NA	NA|345aa|up_9|CP034689.1_725937_726972_+	PRK00856, pyrB, aspartate carbamoyltransferase catalytic subunit	NA|448aa|up_8|CP034689.1_726968_728312_+	PRK07627, PRK07627, dihydroorotase; Provisional	NA|247aa|up_7|CP034689.1_728308_729049_+	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	NA|297aa|up_6|CP034689.1_729061_729952_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|225aa|up_5|CP034689.1_730166_730841_+	PRK06201, PRK06201, hypothetical protein; Validated	NA|406aa|up_4|CP034689.1_730837_732055_+	PRK06107, PRK06107, aspartate transaminase	NA|276aa|up_3|CP034689.1_732118_732946_+	cd13689, PBP2_BsGlnH, Substrate binding domain of ABC glutamine transporter from Bacillus subtilis; the type 2 periplasmic-bindig protein fold	NA|234aa|up_2|CP034689.1_732973_733675_+	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|239aa|up_1|CP034689.1_733676_734393_+	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|242aa|up_0|CP034689.1_734389_735115_+	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|278aa|down_0|CP034689.1_735442_736276_-	PRK00166, apaH, symmetrical bis(5'-nucleosyl)-tetraphosphatase	NA|393aa|down_1|CP034689.1_736272_737451_-	TIGR04408, LptG_lptG, LPS export ABC transporter permease LptG	NA|242aa|down_2|CP034689.1_737542_738268_-	PRK00056, mtgA, monofunctional biosynthetic peptidoglycan transglycosylase; Provisional	NA|288aa|down_3|CP034689.1_738273_739137_-	PRK00258, aroE, shikimate 5-dehydrogenase; Reviewed	NA|299aa|down_4|CP034689.1_739133_740030_-	pfam03544, TonB_C, Gram-negative bacterial TonB protein C-terminal	NA|631aa|down_5|CP034689.1_740241_742134_-	smart00955, RNB, This domain is the catalytic domain of ribonuclease II	NA|201aa|down_6|CP034689.1_742211_742814_-	COG3150, COG3150, Predicted esterase [General function prediction only]	NA|457aa|down_7|CP034689.1_742839_744210_-	TIGR01081, mpl, UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase	NA|178aa|down_8|CP034689.1_744349_744883_+	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|145aa|down_9|CP034689.1_744980_745415_+	PRK05395, PRK05395, type II 3-dehydroquinate dehydratase
GCA_003994415.1_ASM399441v1	CP034689	Achromobacter spanius strain UQ283 chromosome, complete genome	2	779138-779270	2	CRISPRCasFinder	no		DEDDh,DinG,PD-DExK,csa3,WYL	Orphan	GTCGAGCCCCGTAGGATGGGTAAAGCGCGAAATCACAGGCAGCA	44	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,PD-DExK,csa3,WYL	NA|169aa|up_7|CP034689.1_769414_769921_+,NA	NA|281aa|up_9|CP034689.1_767342_768185_-	pfam12697, Abhydrolase_6, Alpha/beta hydrolase family	NA|300aa|up_8|CP034689.1_768325_769225_+	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|169aa|up_7|CP034689.1_769414_769921_+	NA	NA|400aa|up_6|CP034689.1_770026_771226_+	cd17324, MFS_NepI_like, Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily	NA|469aa|up_5|CP034689.1_771413_772820_-	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed	NA|814aa|up_4|CP034689.1_772939_775381_+	COG1042, COG1042, Acyl-CoA synthetase (NDP forming) [Energy production and conversion]	NA|231aa|up_3|CP034689.1_775436_776129_-	cd00431, cysteine_hydrolases, Cysteine hydrolases; This family contains amidohydrolases, like CSHase (N-carbamoylsarcosine amidohydrolase), involved in creatine metabolism and nicotinamidase, converting nicotinamide to nicotinic acid and ammonia in the pyridine nucleotide cycle	NA|279aa|up_2|CP034689.1_776138_776975_-	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]	NA|271aa|up_1|CP034689.1_776978_777791_-	cd03293, ABC_NrtD_SsuB_transporters, ATP-binding cassette domain of the nitrate and sulfonate transporters	NA|339aa|up_0|CP034689.1_777790_778807_-	COG0715, TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components [Inorganic ion transport and metabolism]	NA|226aa|down_0|CP034689.1_779329_780007_-	pfam02230, Abhydrolase_2, Phospholipase/Carboxylesterase	NA|184aa|down_1|CP034689.1_780039_780591_-	PRK05255, PRK05255, ribosome-associated protein	NA|455aa|down_2|CP034689.1_780649_782014_+	PRK11040, PRK11040, peptidase PmbA; Provisional	NA|365aa|down_3|CP034689.1_782294_783389_+	cd13682, PBP2_TRAP_alpha-ketoacid, Substrate-binding component of an alpha-keto acid binding Tripartite ATP-independent Periplasmic transporter and related proteins; contains the type 2 periplasmic-binding protein fold	NA|385aa|down_4|CP034689.1_783649_784804_+	cd06348, PBP1_ABC_HAAT-like, type 1 periplasmic ligand-binding domain of uncharacterized ABC (Atpase Binding Cassette)-type active transport systems predicted to be involved in uptake of amino acids or peptides	NA|294aa|down_5|CP034689.1_784976_785858_+	COG0559, LivH, Branched-chain amino acid ABC-type transport system, permease components [Amino acid transport and metabolism]	NA|294aa|down_6|CP034689.1_785861_786743_+	cd06581, TM_PBP1_LivM_like, Transmembrane subunit (TM) of Escherichia coli LivM and related proteins	NA|263aa|down_7|CP034689.1_786735_787524_+	COG0411, LivG, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]	NA|237aa|down_8|CP034689.1_787579_788290_+	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]	NA|143aa|down_9|CP034689.1_788607_789036_+	PRK09216, rplM, 50S ribosomal protein L13; Reviewed
GCA_003994415.1_ASM399441v1	CP034689	Achromobacter spanius strain UQ283 chromosome, complete genome	3	3471542-3471641	3	CRISPRCasFinder	no		DEDDh,DinG,PD-DExK,csa3,WYL	Orphan	TTGGTTCGCGCTGCACCCATCCTACG	26	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,PD-DExK,csa3,WYL	NA|130aa|up_9|CP034689.1_3461059_3461449_+,NA	NA|130aa|up_9|CP034689.1_3461059_3461449_+	NA	NA|322aa|up_8|CP034689.1_3461491_3462457_+	cd07012, PBP2_Bug_TTT, Bug (Bordetella uptake gene) protein family of periplasmic solute-binding receptors; contains the type 2 periplasmic binding fold	NA|450aa|up_7|CP034689.1_3462570_3463919_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|259aa|up_6|CP034689.1_3463996_3464773_-	cd06195, FNR1, Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin	NA|348aa|up_5|CP034689.1_3465034_3466078_+	cd13542, PBP2_FutA1_ilke, Substrate binding domain of ferric iron-binding protein, a member of the type 2 periplasmic binding fold superfamily	NA|561aa|up_4|CP034689.1_3466190_3467873_+	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]	NA|259aa|up_3|CP034689.1_3467878_3468655_+	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]	NA|302aa|up_2|CP034689.1_3468680_3469586_-	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|233aa|up_1|CP034689.1_3469712_3470411_-	cd02910, cupin_Yhhw_N, Escherichia coli YhhW and YhaK and related proteins, pirin-like bicupin, N-terminal cupin domain	NA|305aa|up_0|CP034689.1_3470588_3471503_+	cd08431, PBP2_HupR, The C-terminal substrate binding domain of LysR-type transcriptional regulator, HupR, which regulates expression of the heme uptake receptor HupA; contains the type 2 periplasmic binding fold	NA|499aa|down_0|CP034689.1_3471732_3473229_-	TIGR01818, Nitrogen_assimilation_regulatory_protein, nitrogen regulation protein NR(I)	NA|355aa|down_1|CP034689.1_3473228_3474293_-	COG3852, NtrB, Signal transduction histidine kinase, nitrogen specific [Signal transduction mechanisms]	NA|471aa|down_2|CP034689.1_3474484_3475897_-	PRK09469, glnA, glutamate--ammonia ligase	NA|407aa|down_3|CP034689.1_3476080_3477301_-	PRK08898, PRK08898, oxygen-independent coproporphyrinogen III oxidase-like protein	NA|208aa|down_4|CP034689.1_3477306_3477930_-	PRK00120, PRK00120, dITP/XTP pyrophosphatase; Reviewed	NA|590aa|down_5|CP034689.1_3478202_3479972_+	cd01948, EAL, EAL domain	NA|591aa|down_6|CP034689.1_3479840_3481613_-	PRK15041, PRK15041, methyl-accepting chemotaxis protein	NA|387aa|down_7|CP034689.1_3481800_3482961_+	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|458aa|down_8|CP034689.1_3482978_3484352_+	pfam03972, MmgE_PrpD, MmgE/PrpD family	NA|245aa|down_9|CP034689.1_3484550_3485285_-	PRK00173, rph, ribonuclease PH; Reviewed
GCA_003994415.1_ASM399441v1	CP034689	Achromobacter spanius strain UQ283 chromosome, complete genome	4	5108149-5108254	4	CRISPRCasFinder	no		DEDDh,DinG,PD-DExK,csa3,WYL	Orphan	ACCCGCCATCGCGCAAACCCAACATCCC	28	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,PD-DExK,csa3,WYL	NA,NA	NA|235aa|up_9|CP034689.1_5097409_5098114_-	cd05233, SDR_c, classical (c) SDRs	NA|323aa|up_8|CP034689.1_5098103_5099072_-	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family;  contains the type 2 periplasmic binding fold	NA|313aa|up_7|CP034689.1_5099173_5100112_-	cd00408, DHDPS-like, Dihydrodipicolinate synthase family	NA|315aa|up_6|CP034689.1_5100224_5101169_+	PRK10082, PRK10082, hypochlorite stress DNA-binding transcriptional regulator HypT	NA|335aa|up_5|CP034689.1_5101350_5102355_+	cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases	NA|163aa|up_4|CP034689.1_5102364_5102853_-	cd00002, YbaK_deacylase, This CD includes cysteinyl-tRNA(Pro) deacylases from Haemophilus influenzae and Escherichia coli and other related bacterial proteins	NA|328aa|up_3|CP034689.1_5102891_5103875_-	PRK00283, xerD, tyrosine recombinase	NA|305aa|up_2|CP034689.1_5103916_5104831_-	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional	NA|561aa|up_1|CP034689.1_5104967_5106650_+	PRK08199, PRK08199, thiamine pyrophosphate protein; Validated	NA|398aa|up_0|CP034689.1_5106782_5107976_+	cd01151, GCD, Glutaryl-CoA dehydrogenase	NA|148aa|down_0|CP034689.1_5108262_5108706_-	cd03454, YdeM, YdeM is a Bacillus subtilis protein that belongs to a family of prokaryotic proteins of unkown function	NA|417aa|down_1|CP034689.1_5108785_5110036_-	TIGR03224, benzo_boxA, benzoyl-CoA oxygenase/reductase, BoxA protein	NA|476aa|down_2|CP034689.1_5110090_5111518_-	TIGR03225, benzo_boxB, benzoyl-CoA oxygenase, B subunit	NA|557aa|down_3|CP034689.1_5111566_5113237_-	PRK08184, PRK08184, benzoyl-CoA-dihydrodiol lyase; Provisional	NA|303aa|down_4|CP034689.1_5113408_5114317_-	PRK08154, PRK08154, anaerobic benzoate catabolism transcriptional regulator; Reviewed	NA|159aa|down_5|CP034689.1_5114495_5114972_+	pfam16155, DUF4863, Domain of unknown function (DUF4863)	NA|540aa|down_6|CP034689.1_5115048_5116668_+	cd05959, BCL_4HBCL, Benzoate CoA ligase (BCL) and 4-Hydroxybenzoate-Coenzyme A Ligase (4-HBA-CoA ligase)	NA|387aa|down_7|CP034689.1_5116749_5117910_+	cd20014, PBP1_RPA0668_benzoate-like, type 1 periplasmic binding-protein component of an ABC system (RPA0668), involved in in the active transport of lignin-derived benzoate derivative compounds, and its close homologs	NA|294aa|down_8|CP034689.1_5117935_5118817_+	cd06582, TM_PBP1_LivH_like, Transmembrane subunit (TM) of Escherichia coli LivH and related proteins	NA|354aa|down_9|CP034689.1_5118819_5119881_+	cd06581, TM_PBP1_LivM_like, Transmembrane subunit (TM) of Escherichia coli LivM and related proteins
