assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003994375.1_ASM399437v1	CP029042	Streptomyces lydicus strain WYEC 108 chromosome, complete genome	1	2236225-2236321	1	CRISPRCasFinder	no		csa3,Cas14u_CAS-V,casR,WYL,DEDDh,cas4,c2c9_V-U4,cas3,DinG,RT	Orphan	TCTTGCGTTTCCGACTCTATCAGATCC	27	1	5	2236252-2236294|2236252-2236294|2236252-2236294|2236252-2236294|2236252-2236294	CP029042.1_3648063-3648105|CP029042.1_4314906-4314948|CP029042.1_5342106-5342064|CP029042.1_6855571-6855529|CP029042.1_6686809-6686767	NA	1	1	Orphan	csa3,Cas14u_CAS-V,casR,WYL,DEDDh,cas4,c2c9_V-U4,cas3,DinG,RT	NA,NA|272aa|down_8|CP029042.1_2243035_2243851_+	NA|335aa|up_9|CP029042.1_2217239_2218244_-	PRK10441, PRK10441, Fe(3+)-siderophore ABC transporter permease	NA|343aa|up_8|CP029042.1_2218351_2219380_+	COG0614, FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component [Inorganic ion transport and metabolism]	NA|297aa|up_7|CP029042.1_2219635_2220526_+	cd06193, siderophore_interacting, Siderophore interacting proteins share the domain structure of the ferredoxin reductase like family	NA|342aa|up_6|CP029042.1_2220551_2221577_-	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase	NA|422aa|up_5|CP029042.1_2221747_2223013_+	pfam06245, DUF1015, Protein of unknown function (DUF1015)	NA|535aa|up_4|CP029042.1_2223173_2224778_+	cd06450, DOPA_deC_like, DOPA decarboxylase family	NA|440aa|up_3|CP029042.1_2224813_2226133_+	COG3486, IucD, Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|190aa|up_2|CP029042.1_2226129_2226699_+	pfam13523, Acetyltransf_8, Acetyltransferase (GNAT) domain	NA|606aa|up_1|CP029042.1_2226695_2228513_+	COG4264, RhbC, Siderophore synthetase component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|677aa|up_0|CP029042.1_2228600_2230631_-	PRK12678, PRK12678, transcription termination factor Rho; Provisional	NA|217aa|down_0|CP029042.1_2236586_2237237_-	pfam02245, Pur_DNA_glyco, Methylpurine-DNA glycosylase (MPG)	NA|261aa|down_1|CP029042.1_2237406_2238189_+	pfam07070, Spo0M, SpoOM protein	NA|180aa|down_2|CP029042.1_2238231_2238771_+	PRK09818, PRK09818, kinase inhibitor	NA|168aa|down_3|CP029042.1_2239162_2239666_+	COG1403, McrA, Restriction endonuclease [Defense mechanisms]	NA|256aa|down_4|CP029042.1_2239699_2240467_-	pfam01925, TauE, Sulfite exporter TauE/SafE	NA|313aa|down_5|CP029042.1_2240550_2241489_-	COG0330, HflC, Membrane protease subunits, stomatin/prohibitin homologs [Posttranslational modification, protein turnover, chaperones]	NA|138aa|down_6|CP029042.1_2241590_2242004_-	COG1585, COG1585, Membrane protein implicated in regulation of membrane protease activity [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]	NA|271aa|down_7|CP029042.1_2242132_2242945_-	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]	NA|272aa|down_8|CP029042.1_2243035_2243851_+	NA	NA|82aa|down_9|CP029042.1_2243956_2244202_-	pfam03777, DUF320, Small secreted domain (DUF320)
GCA_003994375.1_ASM399437v1	CP029042	Streptomyces lydicus strain WYEC 108 chromosome, complete genome	2	2266132-2266250	2	CRISPRCasFinder	no		csa3,Cas14u_CAS-V,casR,WYL,DEDDh,cas4,c2c9_V-U4,cas3,DinG,RT	Orphan	TCTGAACACGACGCAGGAGGCCGGCCGATGAGC	33	0	0	NA	NA	NA	1	1	Orphan	csa3,Cas14u_CAS-V,casR,WYL,DEDDh,cas4,c2c9_V-U4,cas3,DinG,RT	NA|71aa|up_7|CP029042.1_2255445_2255658_-,NA|82aa|down_3|CP029042.1_2270403_2270649_+,NA|66aa|down_8|CP029042.1_2275163_2275361_+	NA|415aa|up_9|CP029042.1_2253424_2254669_+	cd07500, HAD_PSP, phosphoserine phosphatase (PSP), similar to Methanococcus Jannaschii PSP and Saccharomyces cerevisiae SER2p	NA|173aa|up_8|CP029042.1_2254842_2255361_-	COG2062, SixA, Phosphohistidine phosphatase SixA [Signal transduction mechanisms]	NA|71aa|up_7|CP029042.1_2255445_2255658_-	NA	NA|441aa|up_6|CP029042.1_2256002_2257325_-	cd17339, MFS_NIMT_CynX_like, 2-nitroimidazole and cyanate transporters and similar proteins of the Major Facilitator Superfamily of transporters	NA|227aa|up_5|CP029042.1_2257470_2258151_+	COG2186, FadR, Transcriptional regulators [Transcription]	NA|257aa|up_4|CP029042.1_2258294_2259065_-	PRK07889, PRK07889, enoyl-[acyl-carrier-protein] reductase FabI	NA|235aa|up_3|CP029042.1_2259070_2259775_-	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs	NA|511aa|up_2|CP029042.1_2260058_2261591_+	COG0312, TldD, Predicted Zn-dependent proteases and their inactivated homologs [General function prediction only]	NA|294aa|up_1|CP029042.1_2261698_2262580_-	pfam01696, Adeno_E1B_55K, Adenovirus EB1 55K protein / large t-antigen	NA|771aa|up_0|CP029042.1_2262783_2265096_-	TIGR03866, PQQ_ABC_repeats, PQQ-dependent catabolism-associated beta-propeller protein	NA|470aa|down_0|CP029042.1_2267820_2269230_+	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated	NA|93aa|down_1|CP029042.1_2269297_2269576_-	PRK10457, PRK10457, hypothetical protein; Provisional	NA|125aa|down_2|CP029042.1_2269797_2270172_+	pfam11298, DUF3099, Protein of unknown function (DUF3099)	NA|82aa|down_3|CP029042.1_2270403_2270649_+	NA	NA|326aa|down_4|CP029042.1_2270803_2271781_+	pfam13011, LZ_Tnp_IS481, leucine-zipper of insertion element IS481	NA|330aa|down_5|CP029042.1_2271791_2272781_-	PRK00164, moaA, GTP 3',8-cyclase MoaA	NA|546aa|down_6|CP029042.1_2272963_2274601_-	cd11480, SLC5sbd_u4, Uncharacterized bacterial solute carrier 5 subfamily; putative solute-binding domain	NA|115aa|down_7|CP029042.1_2274597_2274942_-	pfam04341, DUF485, Protein of unknown function, DUF485	NA|66aa|down_8|CP029042.1_2275163_2275361_+	NA	NA|505aa|down_9|CP029042.1_2275651_2277166_+	cd07473, Peptidases_S8_Subtilisin_like, Peptidase S8 family domain in Subtilisin-like proteins
GCA_003994375.1_ASM399437v1	CP029042	Streptomyces lydicus strain WYEC 108 chromosome, complete genome	3	2633145-2633262	3	CRISPRCasFinder	no		csa3,Cas14u_CAS-V,casR,WYL,DEDDh,cas4,c2c9_V-U4,cas3,DinG,RT	Orphan	CTCGCCGTTGCGCCTGCGGCGGGCCGGTCCGCTGCGC	37	0	0	NA	NA	NA	1	1	Orphan	csa3,Cas14u_CAS-V,casR,WYL,DEDDh,cas4,c2c9_V-U4,cas3,DinG,RT	NA|76aa|up_3|CP029042.1_2629268_2629496_+,NA|512aa|up_2|CP029042.1_2629619_2631155_+,NA|93aa|down_5|CP029042.1_2641411_2641690_-,NA|72aa|down_8|CP029042.1_2643592_2643808_-	NA|415aa|up_9|CP029042.1_2621778_2623023_-	pfam17964, Big_10, Bacterial Ig domain	NA|133aa|up_8|CP029042.1_2623185_2623584_-	pfam12270, Cyt_c_ox_IV, Cytochrome c oxidase subunit IV	NA|579aa|up_7|CP029042.1_2623580_2625317_-	cd01662, Ubiquinol_Oxidase_I, Ubiquinol oxidase subunit I	NA|278aa|up_6|CP029042.1_2625313_2626147_-	COG1622, CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 [Energy production and conversion]	NA|491aa|up_5|CP029042.1_2626653_2628126_+	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]	NA|325aa|up_4|CP029042.1_2628135_2629110_-	cd01942, ribokinase_group_A, Ribokinase-like subgroup A	NA|76aa|up_3|CP029042.1_2629268_2629496_+	NA	NA|512aa|up_2|CP029042.1_2629619_2631155_+	NA	NA|118aa|up_1|CP029042.1_2631266_2631620_-	TIGR00049, Uncharacterized_protein_in_nifU_5'region, Iron-sulfur cluster assembly accessory protein	NA|396aa|up_0|CP029042.1_2631922_2633110_+	PRK09375, PRK09375, quinolinate synthase NadA	NA|150aa|down_0|CP029042.1_2633311_2633761_-	pfam14478, DUF4430, Domain of unknown function (DUF4430)	NA|362aa|down_1|CP029042.1_2634612_2635698_-	TIGR04188, conserved_hypothetical_protein, methyltransferase, ATP-grasp peptide maturase system	NA|1067aa|down_2|CP029042.1_2635989_2639190_-	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|229aa|down_3|CP029042.1_2639340_2640027_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|434aa|down_4|CP029042.1_2640023_2641325_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|93aa|down_5|CP029042.1_2641411_2641690_-	NA	NA|262aa|down_6|CP029042.1_2641747_2642533_-	COG1842, PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription [Transcription / Signal transduction mechanisms]	NA|199aa|down_7|CP029042.1_2642863_2643460_+	pfam11241, DUF3043, Protein of unknown function (DUF3043)	NA|72aa|down_8|CP029042.1_2643592_2643808_-	NA	NA|427aa|down_9|CP029042.1_2643967_2645248_+	pfam02283, CobU, Cobinamide kinase / cobinamide phosphate guanyltransferase
GCA_003994375.1_ASM399437v1	CP029042	Streptomyces lydicus strain WYEC 108 chromosome, complete genome	4	2791871-2791955	4	CRISPRCasFinder	no		csa3,Cas14u_CAS-V,casR,WYL,DEDDh,cas4,c2c9_V-U4,cas3,DinG,RT	Orphan	GTTCCCGCTGAGCGCGTAGGGGGC	24	0	0	NA	NA	NA	1	1	Orphan	csa3,Cas14u_CAS-V,casR,WYL,DEDDh,cas4,c2c9_V-U4,cas3,DinG,RT	NA|70aa|up_9|CP029042.1_2782241_2782451_-,NA|210aa|up_2|CP029042.1_2789077_2789707_+,NA|81aa|up_1|CP029042.1_2789860_2790103_-,NA|303aa|down_4|CP029042.1_2796519_2797428_+	NA|70aa|up_9|CP029042.1_2782241_2782451_-	NA	NA|244aa|up_8|CP029042.1_2782541_2783273_-	TIGR01915, F420-dependent_NADP_reductase, NADPH-dependent F420 reductase	NA|283aa|up_7|CP029042.1_2783451_2784300_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|324aa|up_6|CP029042.1_2784296_2785268_-	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|443aa|up_5|CP029042.1_2785279_2786608_-	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold	NA|229aa|up_4|CP029042.1_2787135_2787822_-	COG2186, FadR, Transcriptional regulators [Transcription]	NA|325aa|up_3|CP029042.1_2787980_2788955_+	COG0329, DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane]	NA|210aa|up_2|CP029042.1_2789077_2789707_+	NA	NA|81aa|up_1|CP029042.1_2789860_2790103_-	NA	NA|286aa|up_0|CP029042.1_2790168_2791026_+	PRK05716, PRK05716, methionine aminopeptidase; Validated	NA|241aa|down_0|CP029042.1_2791974_2792697_-	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only]	NA|385aa|down_1|CP029042.1_2792997_2794152_+	cd14656, Imelysin-like_EfeO, EfeO is a component of the EfeUOB operon	NA|444aa|down_2|CP029042.1_2794176_2795508_+	TIGR01412, Probable_deferrochelatase/peroxidase_EfeN, Tat-translocated enzyme	NA|331aa|down_3|CP029042.1_2795576_2796569_+	pfam03239, FTR1, Iron permease FTR1 family	NA|303aa|down_4|CP029042.1_2796519_2797428_+	NA	NA|249aa|down_5|CP029042.1_2797539_2798286_-	pfam09250, Prim-Pol, Bifunctional DNA primase/polymerase, N-terminal	NA|200aa|down_6|CP029042.1_2798449_2799049_-	pfam16859, TetR_C_11, Bacterial transcriptional repressor C-terminal	NA|290aa|down_7|CP029042.1_2799483_2800353_+	COG1834, COG1834, N-Dimethylarginine dimethylaminohydrolase [Amino acid transport and metabolism]	NA|318aa|down_8|CP029042.1_2800607_2801561_-	pfam09243, Rsm22, Mitochondrial small ribosomal subunit Rsm22	NA|379aa|down_9|CP029042.1_2801600_2802737_-	PRK03642, PRK03642, putative periplasmic esterase; Provisional
GCA_003994375.1_ASM399437v1	CP029042	Streptomyces lydicus strain WYEC 108 chromosome, complete genome	7	3001799-3001902	7	CRISPRCasFinder	no		csa3,Cas14u_CAS-V,casR,WYL,DEDDh,cas4,c2c9_V-U4,cas3,DinG,RT	Orphan	TGCTCTGCCAATTGAGCTACAGGGGA	26	0	0	NA	NA	NA	1	1	Orphan	csa3,Cas14u_CAS-V,casR,WYL,DEDDh,cas4,c2c9_V-U4,cas3,DinG,RT	NA|241aa|up_9|CP029042.1_2989561_2990284_+,NA|211aa|up_6|CP029042.1_2992594_2993227_-,NA|216aa|up_5|CP029042.1_2993236_2993884_-,NA|99aa|up_3|CP029042.1_2995404_2995701_-,NA|127aa|up_2|CP029042.1_2997086_2997467_-,NA|223aa|up_1|CP029042.1_2998373_2999042_-,NA|100aa|down_0|CP029042.1_3002120_3002420_+	NA|241aa|up_9|CP029042.1_2989561_2990284_+	NA	NA|411aa|up_8|CP029042.1_2990280_2991513_+	smart00752, HTTM, Horizontally Transferred TransMembrane Domain	NA|75aa|up_7|CP029042.1_2991698_2991923_-	PTZ00473, PTZ00473, Plasmodium Vir superfamily; Provisional	NA|211aa|up_6|CP029042.1_2992594_2993227_-	NA	NA|216aa|up_5|CP029042.1_2993236_2993884_-	NA	NA|484aa|up_4|CP029042.1_2993883_2995335_-	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	NA|99aa|up_3|CP029042.1_2995404_2995701_-	NA	NA|127aa|up_2|CP029042.1_2997086_2997467_-	NA	NA|223aa|up_1|CP029042.1_2998373_2999042_-	NA	NA|605aa|up_0|CP029042.1_2999536_3001351_+	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|100aa|down_0|CP029042.1_3002120_3002420_+	NA	NA|488aa|down_1|CP029042.1_3002504_3003968_+	cd07809, FGGY_D-XK_1, D-xylulose kinases, subgroup 1; members of the FGGY family of carbohydrate kinases	NA|420aa|down_2|CP029042.1_3004012_3005272_-	PRK05901, PRK05901, RNA polymerase sigma factor; Provisional	NA|640aa|down_3|CP029042.1_3005400_3007320_-	PRK05667, dnaG, DNA primase; Validated	NA|335aa|down_4|CP029042.1_3007388_3008393_-	PRK07048, PRK07048, threo-3-hydroxy-L-aspartate ammonia-lyase	NA|422aa|down_5|CP029042.1_3008402_3009668_-	PRK09754, PRK09754, phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional	NA|438aa|down_6|CP029042.1_3009944_3011258_-	PRK03007, PRK03007, deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional	NA|291aa|down_7|CP029042.1_3011254_3012127_-	COG2138, COG2138, Sirohydrochlorin ferrochelatase [Inorganic ion transport and metabolism]	NA|342aa|down_8|CP029042.1_3012270_3013296_-	PRK09358, PRK09358, adenosine deaminase; Provisional	NA|147aa|down_9|CP029042.1_3013468_3013909_-	pfam06094, GGACT, Gamma-glutamyl cyclotransferase, AIG2-like
GCA_003994375.1_ASM399437v1	CP029042	Streptomyces lydicus strain WYEC 108 chromosome, complete genome	8	3254948-3255026	8	CRISPRCasFinder	no		csa3,Cas14u_CAS-V,casR,WYL,DEDDh,cas4,c2c9_V-U4,cas3,DinG,RT	Orphan	GGCGCTGCGCTCCGCCGTGCGCGCC	25	0	0	NA	NA	NA	1	1	Orphan	csa3,Cas14u_CAS-V,casR,WYL,DEDDh,cas4,c2c9_V-U4,cas3,DinG,RT	NA|118aa|up_9|CP029042.1_3240594_3240948_-,NA|458aa|up_7|CP029042.1_3242066_3243440_+,NA|259aa|down_0|CP029042.1_3256713_3257490_-,NA|157aa|down_5|CP029042.1_3268651_3269122_+	NA|118aa|up_9|CP029042.1_3240594_3240948_-	NA	NA|231aa|up_8|CP029042.1_3241113_3241806_-	COG2186, FadR, Transcriptional regulators [Transcription]	NA|458aa|up_7|CP029042.1_3242066_3243440_+	NA	NA|338aa|up_6|CP029042.1_3243466_3244480_+	cd13690, PBP2_GluB, Substrate binding domain of ABC glutamate transporter; the type 2 periplasmic binding protein fold	NA|442aa|up_5|CP029042.1_3244628_3245954_+	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|881aa|up_4|CP029042.1_3245950_3248593_+	pfam16918, PknG_TPR, Protein kinase G tetratricopeptide repeat	NA|512aa|up_3|CP029042.1_3248594_3250130_+	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms]	NA|450aa|up_2|CP029042.1_3250271_3251621_+	pfam18571, VWA_3_C, von Willebrand factor type A C-terminal domain	NA|410aa|up_1|CP029042.1_3252164_3253394_+	PHA03247, PHA03247, large tegument protein UL36; Provisional	NA|135aa|up_0|CP029042.1_3253510_3253915_+	cd14771, TrHb2_Mt-trHbO-like_O, Truncated hemoglobins, group 2 (O); Mycobacterium tuberculosis hemoglobin O like	NA|259aa|down_0|CP029042.1_3256713_3257490_-	NA	NA|145aa|down_1|CP029042.1_3257486_3257921_-	COG0824, FcbC, Predicted thioesterase [General function prediction only]	NA|555aa|down_2|CP029042.1_3257926_3259591_-	PRK11819, PRK11819, putative ABC transporter ATP-binding protein; Reviewed	NA|470aa|down_3|CP029042.1_3260032_3261442_-	pfam08341, TED, Thioester domain	NA|681aa|down_4|CP029042.1_3263073_3265116_-	cd11383, YfjP, YfjP GTPase	NA|157aa|down_5|CP029042.1_3268651_3269122_+	NA	NA|130aa|down_6|CP029042.1_3269493_3269883_-	COG1846, MarR, Transcriptional regulators [Transcription]	NA|360aa|down_7|CP029042.1_3270088_3271168_+	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein	NA|257aa|down_8|CP029042.1_3271216_3271987_+	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown]	NA|154aa|down_9|CP029042.1_3272882_3273344_-	cd08580, GDPD_Rv2277c_like, Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial protein Rv2277c and similar proteins
GCA_003994375.1_ASM399437v1	CP029042	Streptomyces lydicus strain WYEC 108 chromosome, complete genome	9	3907859-3907950	9	CRISPRCasFinder	no		csa3,Cas14u_CAS-V,casR,WYL,DEDDh,cas4,c2c9_V-U4,cas3,DinG,RT	Orphan	GTCGCACCCGGACCCGCCTGCCCC	24	0	0	NA	NA	NA	1	1	Orphan	csa3,Cas14u_CAS-V,casR,WYL,DEDDh,cas4,c2c9_V-U4,cas3,DinG,RT	NA|88aa|up_9|CP029042.1_3896350_3896614_-,NA|227aa|down_7|CP029042.1_3917098_3917779_-	NA|88aa|up_9|CP029042.1_3896350_3896614_-	NA	NA|190aa|up_8|CP029042.1_3896750_3897320_-	pfam08877, MepB, MepB protein	NA|160aa|up_7|CP029042.1_3897586_3898066_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|167aa|up_6|CP029042.1_3899195_3899696_-	cd05966, ACS, Acetyl-CoA synthetase (also known as acetate-CoA ligase and acetyl-activating enzyme)	NA|449aa|up_5|CP029042.1_3900015_3901362_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|529aa|up_4|CP029042.1_3901410_3902997_-	cd07724, POD-like_MBL-fold, ETHE1 (PDO type I), persulfide dioxygenase A (PDOA, PDO type II) and related proteins; MBL-fold metallo-hydrolase domain	NA|267aa|up_3|CP029042.1_3903303_3904104_+	COG2188, PhnF, Transcriptional regulators [Transcription]	NA|368aa|up_2|CP029042.1_3904088_3905192_+	pfam01925, TauE, Sulfite exporter TauE/SafE	NA|405aa|up_1|CP029042.1_3905266_3906481_+	COG0446, HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only]	NA|364aa|up_0|CP029042.1_3906575_3907667_-	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms]	NA|442aa|down_0|CP029042.1_3907960_3909286_-	cd05664, M20_Acy1-like, M20 Peptidase aminoacylase 1 subfamily	NA|344aa|down_1|CP029042.1_3909507_3910539_+	pfam00891, Methyltransf_2, O-methyltransferase	NA|386aa|down_2|CP029042.1_3910859_3912017_+	pfam06772, LtrA, Bacterial low temperature requirement A protein (LtrA)	NA|278aa|down_3|CP029042.1_3912447_3913281_+	COG3786, COG3786, Uncharacterized protein conserved in bacteria [Function unknown]	NA|374aa|down_4|CP029042.1_3913273_3914395_+	cd02252, nylC_like, nylC-like family; composed of proteins with similarity to Flavobacterium endo-type 6-aminohexanoate-oligomer hydrolase (EIII), the product of the nylon oligomer degradation gene, nylC	NA|384aa|down_5|CP029042.1_3914513_3915665_-	TIGR01412, Probable_deferrochelatase/peroxidase_EfeN, Tat-translocated enzyme	NA|404aa|down_6|CP029042.1_3915879_3917091_+	TIGR03805, beta_helix_1, parallel beta-helix repeat-containing protein	NA|227aa|down_7|CP029042.1_3917098_3917779_-	NA	NA|820aa|down_8|CP029042.1_3918081_3920541_-	pfam17210, SdrD_B, SdrD B-like domain	NA|239aa|down_9|CP029042.1_3921330_3922047_-	cd02432, Nodulin-21_like_1, Nodulin-21 and CCC1-related protein family
GCA_003994375.1_ASM399437v1	CP029042	Streptomyces lydicus strain WYEC 108 chromosome, complete genome	10	4084904-4084997	10	CRISPRCasFinder	no		csa3,Cas14u_CAS-V,casR,WYL,DEDDh,cas4,c2c9_V-U4,cas3,DinG,RT	Orphan	CCCACAGCCCCGCGCAGCGGACCC	24	0	0	NA	NA	NA	1	1	Orphan	csa3,Cas14u_CAS-V,casR,WYL,DEDDh,cas4,c2c9_V-U4,cas3,DinG,RT	NA,NA|74aa|down_1|CP029042.1_4086289_4086511_-,NA|86aa|down_6|CP029042.1_4089665_4089923_-	NA|241aa|up_9|CP029042.1_4074152_4074875_-	PRK09648, PRK09648, RNA polymerase sigma factor ShbA	NA|204aa|up_8|CP029042.1_4075011_4075623_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|111aa|up_7|CP029042.1_4076002_4076335_+	pfam02467, Whib, Transcription factor WhiB	NA|304aa|up_6|CP029042.1_4076499_4077411_-	cd08423, PBP2_LTTR_like_6, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|222aa|up_5|CP029042.1_4077563_4078229_+	COG2258, COG2258, Uncharacterized protein conserved in bacteria [Function unknown]	NA|258aa|up_4|CP029042.1_4078362_4079136_+	COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]	NA|340aa|up_3|CP029042.1_4079400_4080420_+	cd12167, 2-Hacid_dh_8, Putative D-isomer specific 2-hydroxyacid dehydrogenases	NA|541aa|up_2|CP029042.1_4080585_4082208_-	PRK00013, groEL, chaperonin GroEL; Reviewed	NA|103aa|up_1|CP029042.1_4082343_4082652_-	PRK00364, groES, co-chaperonin GroES; Reviewed	NA|452aa|up_0|CP029042.1_4083163_4084519_+	COG0772, FtsW, Bacterial cell division membrane protein [Cell division and chromosome partitioning]	NA|417aa|down_0|CP029042.1_4085055_4086306_+	pfam18096, Thump_like, THUMP domain-like	NA|74aa|down_1|CP029042.1_4086289_4086511_-	NA	NA|380aa|down_2|CP029042.1_4086530_4087670_-	PRK09604, PRK09604, tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	NA|158aa|down_3|CP029042.1_4087675_4088149_-	TIGR01575, rimI, ribosomal-protein-alanine acetyltransferase	NA|220aa|down_4|CP029042.1_4088256_4088916_-	TIGR03725, T6A_YeaZ, tRNA threonylcarbamoyl adenosine modification protein YeaZ	NA|190aa|down_5|CP029042.1_4089055_4089625_+	pfam03734, YkuD, L,D-transpeptidase catalytic domain	NA|86aa|down_6|CP029042.1_4089665_4089923_-	NA	NA|176aa|down_7|CP029042.1_4090119_4090647_-	pfam02367, TsaE, Threonylcarbamoyl adenosine biosynthesis protein TsaE	NA|445aa|down_8|CP029042.1_4090728_4092063_-	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold	NA|396aa|down_9|CP029042.1_4092059_4093247_-	cd00430, PLPDE_III_AR, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Alanine Racemase
GCA_003994375.1_ASM399437v1	CP029042	Streptomyces lydicus strain WYEC 108 chromosome, complete genome	15	6103617-6103695	15	CRISPRCasFinder	no		csa3,Cas14u_CAS-V,casR,WYL,DEDDh,cas4,c2c9_V-U4,cas3,DinG,RT	Orphan	GGGGTGGAGGTCGGGTGACGGGCGGGA	27	0	0	NA	NA	NA	1	1	Orphan	csa3,Cas14u_CAS-V,casR,WYL,DEDDh,cas4,c2c9_V-U4,cas3,DinG,RT	NA,NA|61aa|down_0|CP029042.1_6103891_6104074_+,NA|185aa|down_2|CP029042.1_6105367_6105922_-	NA|476aa|up_9|CP029042.1_6092861_6094289_-	cd13970, ABC1_ADCK3, Activator of bc1 complex (ABC1) kinases, also called aarF domain containing kinase 3	NA|379aa|up_8|CP029042.1_6094324_6095461_-	pfam00899, ThiF, ThiF family	NA|209aa|up_7|CP029042.1_6095651_6096278_+	cd07344, M48_yhfN_like, Peptidase M48 YhfN-like, a novel minigluzincin	NA|582aa|up_6|CP029042.1_6096392_6098138_+	pfam02342, TerD, TerD domain	NA|228aa|up_5|CP029042.1_6098153_6098837_+	pfam01987, AIM24, Mitochondrial biogenesis AIM24	NA|253aa|up_4|CP029042.1_6098857_6099616_+	pfam01987, AIM24, Mitochondrial biogenesis AIM24	NA|177aa|up_3|CP029042.1_6099686_6100217_-	cd03674, Nudix_Hydrolase_1, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|488aa|up_2|CP029042.1_6100213_6101677_-	pfam10103, Zincin_2, Zincin-like metallopeptidase	NA|384aa|up_1|CP029042.1_6101869_6103021_+	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs	NA|160aa|up_0|CP029042.1_6103124_6103604_+	cd00756, MoaE, MoaE family	NA|61aa|down_0|CP029042.1_6103891_6104074_+	NA	NA|366aa|down_1|CP029042.1_6104197_6105295_+	COG3480, SdrC, Predicted secreted protein containing a PDZ domain [Signal transduction mechanisms]	NA|185aa|down_2|CP029042.1_6105367_6105922_-	NA	NA|935aa|down_3|CP029042.1_6106136_6108941_+	pfam03699, UPF0182, Uncharacterized protein family (UPF0182)	NA|601aa|down_4|CP029042.1_6109383_6111186_+	sd00010, SLR, Sel1-like repeat	NA|377aa|down_5|CP029042.1_6111419_6112550_-	cd13652, PBP2_ThiY_THI5_like_1, Putative substrate binding domain of an ABC-type transporter similar to ThiY/THI5; the type 2 periplasmic binding protein fold	NA|297aa|down_6|CP029042.1_6112598_6113489_-	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]	NA|262aa|down_7|CP029042.1_6113485_6114271_-	cd03293, ABC_NrtD_SsuB_transporters, ATP-binding cassette domain of the nitrate and sulfonate transporters	NA|140aa|down_8|CP029042.1_6114637_6115057_-	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|488aa|down_9|CP029042.1_6115216_6116680_+	cd08156, catalase_clade_3, Clade 3 of the heme-binding enzyme catalase
GCA_003994375.1_ASM399437v1	CP029042	Streptomyces lydicus strain WYEC 108 chromosome, complete genome	17	6847564-6847697	16	CRISPRCasFinder	no		csa3,Cas14u_CAS-V,casR,WYL,DEDDh,cas4,c2c9_V-U4,cas3,DinG,RT	Orphan	GAGCTCGCCCGCGATGGAACGGCCCACCGCGCCCGCGCC	39	0	0	NA	NA	NA	1	1	Orphan	csa3,Cas14u_CAS-V,casR,WYL,DEDDh,cas4,c2c9_V-U4,cas3,DinG,RT	NA|30aa|up_9|CP029042.1_6834601_6834691_+,NA|78aa|down_8|CP029042.1_6872544_6872778_-	NA|30aa|up_9|CP029042.1_6834601_6834691_+	NA	NA|572aa|up_8|CP029042.1_6834722_6836438_+	PRK05482, PRK05482, potassium-transporting ATPase subunit A; Provisional	NA|712aa|up_7|CP029042.1_6836434_6838570_+	PRK01122, PRK01122, potassium-transporting ATPase subunit KdpB	NA|226aa|up_6|CP029042.1_6838566_6839244_+	PRK13994, PRK13994, potassium-transporting ATPase subunit C; Provisional	NA|256aa|up_5|CP029042.1_6839808_6840576_+	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|188aa|up_4|CP029042.1_6840710_6841274_-	pfam13527, Acetyltransf_9, Acetyltransferase (GNAT) domain	NA|851aa|up_3|CP029042.1_6842128_6844681_+	COG2205, KdpD, Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms]	NA|228aa|up_2|CP029042.1_6844760_6845444_+	PRK10529, PRK10529, DNA-binding transcriptional activator KdpE; Provisional	NA|133aa|up_1|CP029042.1_6845535_6845934_+	cd04488, RecG_wedge_OBF, RecG_wedge_OBF: A subfamily of OB folds corresponding to the OB fold found in the N-terminal (wedge) domain of Escherichia coli RecG	NA|295aa|up_0|CP029042.1_6845937_6846822_+	pfam11361, DUF3159, Protein of unknown function (DUF3159)	NA|223aa|down_0|CP029042.1_6847711_6848380_-	COG0569, TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]	NA|658aa|down_1|CP029042.1_6848709_6850683_+	pfam02254, TrkA_N, TrkA-N domain	NA|684aa|down_2|CP029042.1_6851065_6853117_+	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|443aa|down_3|CP029042.1_6853389_6854718_+	COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis]	NA|525aa|down_4|CP029042.1_6862424_6863999_+	pfam09660, DUF2397, Protein of unknown function (DUF2397)	NA|412aa|down_5|CP029042.1_6863995_6865231_+	pfam09661, DUF2398, Protein of unknown function (DUF2398)	NA|1393aa|down_6|CP029042.1_6865227_6869406_+	TIGR02680, conserved_hypothetical_protein, TIGR02680 family protein	NA|440aa|down_7|CP029042.1_6869420_6870740_+	TIGR02679, conserved_hypothetical_protein, TIGR02679 family protein	NA|78aa|down_8|CP029042.1_6872544_6872778_-	NA	NA|2126aa|down_9|CP029042.1_6873454_6879832_+	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated
GCA_003994375.1_ASM399437v1	CP029042	Streptomyces lydicus strain WYEC 108 chromosome, complete genome	18	7071233-7071339	17	CRISPRCasFinder	no	DEDDh	csa3,Cas14u_CAS-V,casR,WYL,DEDDh,cas4,c2c9_V-U4,cas3,DinG,RT	Unclear	GGCCGAGCGAAGCGAGGTTTCGGCATGAGC	30	0	0	NA	NA	NA	1	1	Orphan	csa3,Cas14u_CAS-V,casR,WYL,DEDDh,cas4,c2c9_V-U4,cas3,DinG,RT	NA|272aa|up_4|CP029042.1_7066452_7067268_+,NA	NA|182aa|up_9|CP029042.1_7057043_7057589_+	pfam00498, FHA, FHA domain	NA|504aa|up_8|CP029042.1_7058315_7059827_-	PRK06416, PRK06416, dihydrolipoamide dehydrogenase; Reviewed	NA|299aa|up_7|CP029042.1_7059962_7060859_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|815aa|up_6|CP029042.1_7060866_7063311_-	TIGR02401, Putative_maltooligosyl_trehalose_synthase, malto-oligosyltrehalose synthase	NA|735aa|up_5|CP029042.1_7064005_7066210_-	TIGR02100, Glycogen_operon_protein_GlgX_homolog, glycogen debranching enzyme GlgX	NA|272aa|up_4|CP029042.1_7066452_7067268_+	NA	NA|443aa|up_3|CP029042.1_7067315_7068644_+	pfam01179, Cu_amine_oxid, Copper amine oxidase, enzyme domain	NA|416aa|up_2|CP029042.1_7068744_7069992_+	pfam18725, HEPN_SAV2148, SAV2148-like HEPN	NA|93aa|up_1|CP029042.1_7069918_7070197_+	COG3903, COG3903, Predicted ATPase [General function prediction only]	NA|264aa|up_0|CP029042.1_7070236_7071028_-	PRK05653, fabG, 3-oxoacyl-ACP reductase FabG	NA|297aa|down_0|CP029042.1_7072095_7072986_-	pfam01636, APH, Phosphotransferase enzyme family	NA|314aa|down_1|CP029042.1_7073233_7074175_+	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|323aa|down_2|CP029042.1_7074171_7075140_+	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|442aa|down_3|CP029042.1_7075139_7076465_+	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold	NA|400aa|down_4|CP029042.1_7076893_7078093_+	cd04077, Peptidases_S8_PCSK9_ProteinaseK_like, Peptidase S8 family domain in ProteinaseK-like proteins	NA|195aa|down_5|CP029042.1_7078268_7078853_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|503aa|down_6|CP029042.1_7078849_7080358_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|364aa|down_7|CP029042.1_7080689_7081781_+	cd06423, CESA_like, CESA_like is  the cellulose synthase superfamily	NA|322aa|down_8|CP029042.1_7082233_7083199_+	PRK05481, PRK05481, lipoyl synthase; Provisional	NA|603aa|down_9|CP029042.1_7083335_7085144_+	PRK14083, PRK14083, HSP90 family protein; Provisional
