assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003991465.1_ASM399146v1	CP034409	Pseudomonas aeruginosa strain SP4527 chromosome, complete genome	1	1385029-1386077	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas6f,cas7f,cas5f,cas8f,cas3f,cas1	DEDDh,cas3,WYL,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,csa3,DinG,PD-DExK,RT	Type I-F	GTTCACTGCCGTATAGGCAGCTAAGAAA,GTTCACTGCCGTATAGGCAGCTAAGAAAA,GTTCACTGCCGTATAGGCAGCTAAGAAA	28,29,28	2	2	1385237-1385268|1385238-1385268	CP034409.1_2530660-2530629|CP034409.1_2530659-2530629	I-F:I-F:I-F	16,17,17	17	TypeI-F	DEDDh,cas3,WYL,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,csa3,DinG,PD-DExK,RT	NA|62aa|up_9|CP034409.1_1362220_1362406_-,NA|82aa|up_5|CP034409.1_1365880_1366126_-,NA|105aa|down_6|CP034409.1_1395608_1395923_-	NA|62aa|up_9|CP034409.1_1362220_1362406_-	NA	NA|725aa|up_8|CP034409.1_1362469_1364644_+	pfam04632, FUSC, Fusaric acid resistance protein family	NA|70aa|up_7|CP034409.1_1364633_1364843_+	pfam07869, DUF1656, Protein of unknown function (DUF1656)	NA|335aa|up_6|CP034409.1_1364839_1365844_+	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms]	NA|82aa|up_5|CP034409.1_1365880_1366126_-	NA	NA|305aa|up_4|CP034409.1_1366387_1367302_+	TIGR03707, PPK2_P_aer, polyphosphate kinase 2, PA0141 family	NA|338aa|up_3|CP034409.1_1367477_1368491_+	pfam13523, Acetyltransf_8, Acetyltransferase (GNAT) domain	NA|188aa|up_2|CP034409.1_1368567_1369131_-	PRK07037, PRK07037, extracytoplasmic-function sigma-70 factor; Validated	NA|255aa|up_1|CP034409.1_1369773_1370538_+	COG3208, GrsT, Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|171aa|up_0|CP034409.1_1384121_1384634_-	COG3617, COG3617, Prophage antirepressor [Transcription]	cas6f|188aa|down_0|CP034409.1_1386199_1386763_-	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f	cas7f|343aa|down_1|CP034409.1_1386766_1387795_-	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas5f|328aa|down_2|CP034409.1_1387805_1388789_-	cd09736, Csy2_I-F, CRISPR/Cas system-associated RAMP superfamily protein Csy2	cas8f|435aa|down_3|CP034409.1_1388775_1390080_-	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1	cas3f|1077aa|down_4|CP034409.1_1390137_1393368_-	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas1|325aa|down_5|CP034409.1_1393364_1394339_-	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	NA|105aa|down_6|CP034409.1_1395608_1395923_-	NA	NA|307aa|down_7|CP034409.1_1396627_1397548_-	COG4313, COG4313, Protein involved in meta-pathway of phenol degradation [Energy production and conversion]	NA|473aa|down_8|CP034409.1_1397581_1399000_-	pfam03573, OprD, outer membrane porin, OprD family	NA|227aa|down_9|CP034409.1_1399081_1399762_-	cd01012, YcaC_related, YcaC related amidohydrolases; E
GCA_003991465.1_ASM399146v1	CP034409	Pseudomonas aeruginosa strain SP4527 chromosome, complete genome	2	1394591-1395338	2,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cas6f,cas7f,cas5f,cas8f,cas3f,cas1	DEDDh,cas3,WYL,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,csa3,DinG,PD-DExK,RT	Type I-F	TTTCTTAGCTGCCTACACGGCAGTGAAC,TTTCTTAGCTGCCTACACGGCAGTGAAC,GTTCACTGCCGTGTAGGCAGCTAAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	12,12,10	12	TypeI-F	DEDDh,cas3,WYL,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,csa3,DinG,PD-DExK,RT	NA,NA|105aa|down_0|CP034409.1_1395608_1395923_-	NA|338aa|up_9|CP034409.1_1367477_1368491_+	pfam13523, Acetyltransf_8, Acetyltransferase (GNAT) domain	NA|188aa|up_8|CP034409.1_1368567_1369131_-	PRK07037, PRK07037, extracytoplasmic-function sigma-70 factor; Validated	NA|255aa|up_7|CP034409.1_1369773_1370538_+	COG3208, GrsT, Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|171aa|up_6|CP034409.1_1384121_1384634_-	COG3617, COG3617, Prophage antirepressor [Transcription]	cas6f|188aa|up_5|CP034409.1_1386199_1386763_-	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f	cas7f|343aa|up_4|CP034409.1_1386766_1387795_-	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas5f|328aa|up_3|CP034409.1_1387805_1388789_-	cd09736, Csy2_I-F, CRISPR/Cas system-associated RAMP superfamily protein Csy2	cas8f|435aa|up_2|CP034409.1_1388775_1390080_-	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1	cas3f|1077aa|up_1|CP034409.1_1390137_1393368_-	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas1|325aa|up_0|CP034409.1_1393364_1394339_-	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	NA|105aa|down_0|CP034409.1_1395608_1395923_-	NA	NA|307aa|down_1|CP034409.1_1396627_1397548_-	COG4313, COG4313, Protein involved in meta-pathway of phenol degradation [Energy production and conversion]	NA|473aa|down_2|CP034409.1_1397581_1399000_-	pfam03573, OprD, outer membrane porin, OprD family	NA|227aa|down_3|CP034409.1_1399081_1399762_-	cd01012, YcaC_related, YcaC related amidohydrolases; E	NA|287aa|down_4|CP034409.1_1399859_1400720_-	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|313aa|down_5|CP034409.1_1400820_1401759_+	PRK14997, PRK14997, LysR family transcriptional regulator; Provisional	NA|546aa|down_6|CP034409.1_1401762_1403400_-	PRK13272, treA, alpha,alpha-trehalase TreA	NA|142aa|down_7|CP034409.1_1403758_1404184_+	COG4244, COG4244, Predicted membrane protein [Function unknown]	NA|440aa|down_8|CP034409.1_1404176_1405496_+	COG2133, COG2133, Glucose/sorbosone dehydrogenases [Carbohydrate transport and metabolism]	NA|470aa|down_9|CP034409.1_1405674_1407084_+	PRK06938, PRK06938, diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
GCA_003991465.1_ASM399146v1	CP034409	Pseudomonas aeruginosa strain SP4527 chromosome, complete genome	4	5401899-5402057	4	CRISPRCasFinder	no		DEDDh,cas3,WYL,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,csa3,DinG,PD-DExK,RT	Orphan	CGCATGCGTTTTTCAATGCGAACGACCGGCCAGGATGGCCGGGCTGGGGG	50	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,WYL,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,csa3,DinG,PD-DExK,RT	NA,NA	NA|261aa|up_9|CP034409.1_5392199_5392982_-	cd13597, PBP2_lipoprotein_Tp32, The substrate-binding domain of the 32-kilodalton lipoprotein (Tp32) from Treponema pallidum binds L-methionine; the type 2 periplasmic-binding protein fold	NA|226aa|up_8|CP034409.1_5393058_5393736_-	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism]	NA|336aa|up_7|CP034409.1_5393735_5394743_-	PRK11153, metN, DL-methionine transporter ATP-binding subunit; Provisional	NA|263aa|up_6|CP034409.1_5394949_5395738_-	TIGR03302, OM_YfiO, outer membrane assembly lipoprotein YfiO	NA|263aa|up_5|CP034409.1_5395779_5396568_-	PRK09543, znuB, zinc ABC transporter permease subunit ZnuB	NA|270aa|up_4|CP034409.1_5396560_5397370_-	PRK09544, znuC, high-affinity zinc transporter ATPase; Reviewed	NA|168aa|up_3|CP034409.1_5397369_5397873_-	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|308aa|up_2|CP034409.1_5397942_5398866_+	COG4531, ZnuA, ABC-type Zn2+ transport system, periplasmic component/surface adhesin [Inorganic ion transport and metabolism]	NA|735aa|up_1|CP034409.1_5398975_5401180_+	TIGR02504, ribonucleotide_reductase, ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent	NA|230aa|up_0|CP034409.1_5401196_5401886_+	COG0209, NrdA, Ribonucleotide reductase, alpha subunit [Nucleotide transport and metabolism]	NA|317aa|down_0|CP034409.1_5402174_5403125_-	PRK05231, PRK05231, homoserine kinase; Provisional	NA|97aa|down_1|CP034409.1_5403158_5403449_-	pfam11191, DUF2782, Protein of unknown function (DUF2782)	NA|914aa|down_2|CP034409.1_5403526_5406268_+	PRK05755, PRK05755, DNA polymerase I; Provisional	NA|216aa|down_3|CP034409.1_5406531_5407179_-	PRK00454, engB, GTP-binding protein YsxC; Reviewed	NA|98aa|down_4|CP034409.1_5407362_5407656_+	COG3245, CycB, Cytochrome c5 [Energy production and conversion]	NA|202aa|down_5|CP034409.1_5407701_5408307_+	COG2863, COG2863, Cytochrome c553 [Energy production and conversion]	NA|212aa|down_6|CP034409.1_5408474_5409110_+	cd03019, DsbA_DsbA, DsbA family, DsbA subfamily; DsbA is a monomeric thiol disulfide oxidoreductase protein containing a redox active CXXC motif imbedded in a TRX fold	NA|293aa|down_7|CP034409.1_5409125_5410004_+	COG3568, ElsH, Metal-dependent hydrolase [General function prediction only]	NA|198aa|down_8|CP034409.1_5412134_5412728_+	PRK10739, PRK10739, YhgN family NAAT transporter	NA|260aa|down_9|CP034409.1_5412757_5413537_+	COG3023, ampD, N-acetyl-anhydromuramyl-L-alanine amidase [Cell envelope biogenesis, outer membrane]
GCA_003991465.1_ASM399146v1	CP034409	Pseudomonas aeruginosa strain SP4527 chromosome, complete genome	5	5693667-5693780	5	CRISPRCasFinder	no		DEDDh,cas3,WYL,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,csa3,DinG,PD-DExK,RT	Orphan	GGCCAAAGAACTGGAGGGCAAGGTATGA	28	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,WYL,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,csa3,DinG,PD-DExK,RT	NA,NA|50aa|down_1|CP034409.1_5697227_5697377_-,NA|168aa|down_3|CP034409.1_5698372_5698876_-,NA|251aa|down_6|CP034409.1_5700629_5701382_-,NA|185aa|down_8|CP034409.1_5702150_5702705_-	NA|293aa|up_9|CP034409.1_5680513_5681392_-	TIGR03381, putative_carbon-nitrogen_hydrolase, N-carbamoylputrescine amidase	NA|222aa|up_8|CP034409.1_5681554_5682220_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|354aa|up_7|CP034409.1_5682282_5683344_-	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|459aa|up_6|CP034409.1_5683599_5684976_-	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism]	NA|251aa|up_5|CP034409.1_5685254_5686007_+	pfam07722, Peptidase_C26, Peptidase C26	NA|453aa|up_4|CP034409.1_5686047_5687406_+	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism]	NA|457aa|up_3|CP034409.1_5687471_5688842_+	PRK07480, PRK07480, putative aminotransferase; Validated	NA|368aa|up_2|CP034409.1_5688957_5690061_+	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|366aa|up_1|CP034409.1_5690479_5691577_+	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|385aa|up_0|CP034409.1_5691631_5692786_+	PRK11607, potG, putrescine ABC transporter ATP-binding subunit PotG	NA|796aa|down_0|CP034409.1_5694843_5697231_-	COG2366, COG2366, Protein related to penicillin acylase [General function prediction only]	NA|50aa|down_1|CP034409.1_5697227_5697377_-	NA	NA|351aa|down_2|CP034409.1_5697341_5698394_+	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term	NA|168aa|down_3|CP034409.1_5698372_5698876_-	NA	NA|204aa|down_4|CP034409.1_5698980_5699592_-	cd02969, PRX_like1, Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs	NA|340aa|down_5|CP034409.1_5699590_5700610_+	COG2267, PldB, Lysophospholipase [Lipid metabolism]	NA|251aa|down_6|CP034409.1_5700629_5701382_-	NA	NA|233aa|down_7|CP034409.1_5701430_5702129_+	COG3751, EGL-9, Predicted proline hydroxylase [Posttranslational modification, protein turnover, chaperones]	NA|185aa|down_8|CP034409.1_5702150_5702705_-	NA	NA|165aa|down_9|CP034409.1_5702970_5703465_+	COG1683, COG1683, Uncharacterized conserved protein [Function unknown]
GCA_003991465.1_ASM399146v1	CP034409	Pseudomonas aeruginosa strain SP4527 chromosome, complete genome	6	6868351-6868798	3,6,3	PILER-CR,CRISPRCasFinder,CRT	no		DEDDh,cas3,WYL,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,csa3,DinG,PD-DExK,RT	Orphan	GTTCACTGCCGTATAGGCAGCTAAGAAA,GTTCACTGCCGTATAGGCAGCTAAGAAA,GTTCACTGCCGTATAGGCAGCTAAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	7,7,7	7	Orphan	DEDDh,cas3,WYL,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,csa3,DinG,PD-DExK,RT	NA|71aa|up_6|CP034409.1_6861518_6861731_-,NA|105aa|up_0|CP034409.1_6867765_6868080_+,NA|44aa|down_0|CP034409.1_6869388_6869520_+,NA|141aa|down_1|CP034409.1_6869677_6870100_-,NA|59aa|down_5|CP034409.1_6873274_6873451_-	NA|110aa|up_9|CP034409.1_6858487_6858817_-	pfam06942, GlpM, GlpM protein	NA|513aa|up_8|CP034409.1_6858949_6860488_-	PRK12266, glpD, glycerol-3-phosphate dehydrogenase; Reviewed	NA|252aa|up_7|CP034409.1_6860766_6861522_-	PRK10906, PRK10906, DeoR/GlpR family transcriptional regulator	NA|71aa|up_6|CP034409.1_6861518_6861731_-	NA	NA|506aa|up_5|CP034409.1_6861727_6863245_-	PRK00047, glpK, glycerol kinase GlpK	NA|280aa|up_4|CP034409.1_6863284_6864124_-	cd00333, MIP, Major intrinsic protein (MIP) superfamily	NA|157aa|up_3|CP034409.1_6864388_6864859_+	cd00002, YbaK_deacylase, This CD includes cysteinyl-tRNA(Pro) deacylases from Haemophilus influenzae and Escherichia coli and other related bacterial proteins	NA|495aa|up_2|CP034409.1_6864922_6866407_+	cd07786, FGGY_EcGK_like, Escherichia coli glycerol kinase-like proteins; belongs to the FGGY family of carbohydrate kinases	NA|262aa|up_1|CP034409.1_6866602_6867388_+	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only]	NA|105aa|up_0|CP034409.1_6867765_6868080_+	NA	NA|44aa|down_0|CP034409.1_6869388_6869520_+	NA	NA|141aa|down_1|CP034409.1_6869677_6870100_-	NA	NA|177aa|down_2|CP034409.1_6870199_6870730_-	COG3038, CybB, Cytochrome B561 [Energy production and conversion]	NA|66aa|down_3|CP034409.1_6870912_6871110_+	cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones	NA|393aa|down_4|CP034409.1_6872088_6873267_+	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|59aa|down_5|CP034409.1_6873274_6873451_-	NA	NA|308aa|down_6|CP034409.1_6873577_6874501_-	cd06986, cupin_MmsR-like_N, AraC/XylS family transcriptional regulators similar to MmsR, N-terminal cupin domain	NA|498aa|down_7|CP034409.1_6874632_6876126_+	TIGR01722, Methylmalonate-semialdehyde_dehydrogenase, methylmalonic acid semialdehyde dehydrogenase	NA|299aa|down_8|CP034409.1_6876141_6877038_+	TIGR01692, 3-hydroxyisobutyrate_dehydrogenase_mitochondrial, 3-hydroxyisobutyrate dehydrogenase	NA|629aa|down_9|CP034409.1_6877139_6879026_+	cd05967, PrpE, Propionyl-CoA synthetase (PrpE)
