The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
AP019192	Streptococcus pneumoniae ASP0581 DNA, complete genome	2156271	40295	51751	2156271		Synechococcus_phage(33.33%)	7	NA	NA
BBG80559.1|40295_42449_+	transport/processing ATP-binding protein ComA	NA	W8CYL7	Bacillus_phage	28.0	8.0e-45
BBG80560.1|42461_43811_+	transport protein ComB	NA	NA	NA	NA	NA
BBG80561.1|43980_44688_+	phosphoribosylaminoimidazole-succinocarboxamide synthase	NA	A0A1D8KNF0	Synechococcus_phage	39.2	1.8e-41
BBG80562.1|44889_48615_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	25.6	2.8e-37
BBG80563.1|48707_50150_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	35.1	2.8e-54
BBG80564.1|50186_51209_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A1D7SE90	Cyanophage	43.9	1.2e-64
BBG80565.1|51205_51751_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.0	9.7e-24
>prophage 2
AP019192	Streptococcus pneumoniae ASP0581 DNA, complete genome	2156271	323083	380190	2156271	protease,holin,transposase	Streptococcus_phage(30.0%)	52	NA	NA
BBG80863.1|323083_325189_+|protease	ATP-dependent Clp protease ATP-binding subunit	protease	H6X3M6	Enterobacteria_phage	37.7	3.4e-117
BBG80864.1|325484_325967_-	S-ribosylhomocysteine lyase	NA	NA	NA	NA	NA
BBG80865.1|326061_327546_-	UPF0371 protein	NA	NA	NA	NA	NA
BBG80866.1|327698_329306_+	glucan 1,6-alpha-glucosidase	NA	NA	NA	NA	NA
BBG80867.1|329464_329638_+	S-ribosylhomocysteinase	NA	NA	NA	NA	NA
BBG80868.1|330374_331820_+	LytR family transcriptional regulator	NA	A0A1X9I5X1	Streptococcus_phage	59.6	2.6e-132
BBG80869.1|331821_332553_+	tyrosine protein phosphatase	NA	NA	NA	NA	NA
BBG80870.1|332561_333254_+	capsular polysaccharide biosynthesis protein CpsC	NA	A0A1X9I5E1	Streptococcus_phage	56.8	1.8e-62
BBG80871.1|333263_333938_+	tyrosine protein kinase	NA	A0A1X9I5D6	Streptococcus_phage	63.4	8.5e-78
BBG80872.1|334284_334884_+	UDP-phosphate galactose phosphotransferase	NA	NA	NA	NA	NA
BBG80873.1|334888_336115_+	glycosyltransferase WbuB	NA	NA	NA	NA	NA
BBG80874.1|336111_337281_+	glycosyl transferase	NA	NA	NA	NA	NA
BBG80875.1|337318_338530_+	hypothetical protein	NA	NA	NA	NA	NA
BBG80876.1|338549_339581_+	glycosyl transferase	NA	NA	NA	NA	NA
BBG80877.1|339582_340761_+	hypothetical protein	NA	NA	NA	NA	NA
BBG80878.1|340802_341990_+	glycosyl transferase	NA	NA	NA	NA	NA
BBG80879.1|341986_343531_+	oligosaccharide transporter (flippase)	NA	NA	NA	NA	NA
BBG80880.1|343523_344747_+	UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase	NA	M1HNJ7	Paramecium_bursaria_Chlorella_virus	28.0	9.8e-24
BBG80881.1|344775_345873_+	UDP-N-acetyl glucosamine 2-epimerase	NA	A0A0N9R0B2	Chrysochromulina_ericina_virus	30.5	5.7e-31
BBG80882.1|345876_346932_+	capsular polysaccharide biosynthesis protein	NA	A0A1V0SAI8	Catovirus	33.0	2.6e-33
BBG80883.1|347031_348261_+	capsular polysaccharide biosynthesis protein Cap8F	NA	NA	NA	NA	NA
BBG80884.1|348261_349446_+	UDP-N-acetyl glucosamine 2-epimerase	NA	A0A1V0SJE0	Klosneuvirus	51.3	1.2e-103
BBG80885.1|349808_349967_-	hypothetical protein	NA	NA	NA	NA	NA
BBG80886.1|350037_350487_-|transposase	transposase	transposase	NA	NA	NA	NA
BBG80887.1|350856_351123_+	hypothetical protein	NA	NA	NA	NA	NA
BBG80888.1|351277_351601_-|transposase	transposase	transposase	NA	NA	NA	NA
BBG80889.1|351581_351767_-	hypothetical protein	NA	NA	NA	NA	NA
BBG80890.1|351917_352160_+	hypothetical protein	NA	NA	NA	NA	NA
BBG80891.1|352297_352642_+|transposase	transposase	transposase	NA	NA	NA	NA
BBG80892.1|352905_354888_+	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
BBG80893.1|355188_360477_+	endo-alpha-N-acetylgalactosaminidase	NA	NA	NA	NA	NA
BBG80894.1|360643_362803_-	penicillin-binding protein 1A	NA	NA	NA	NA	NA
BBG80895.1|362799_363396_-	Holliday junction resolvase RecU	NA	A0A1L2JY30	Aeribacillus_phage	33.9	8.7e-18
BBG80896.1|363461_363989_+	UPF0398 protein	NA	NA	NA	NA	NA
BBG80897.1|364058_364388_+	cell cycle protein GpsB	NA	NA	NA	NA	NA
BBG80898.1|364873_366031_+	RNA methyltransferase	NA	NA	NA	NA	NA
BBG80899.1|366042_367437_+	Mid-cell-anchored protein Z	NA	NA	NA	NA	NA
BBG80900.1|367512_368937_+	6-phosphogluconate dehydrogenase, decarboxylating	NA	M4QQM4	Ostreococcus_lucimarinus_virus	29.6	1.6e-41
BBG80901.1|368948_369638_+	DNA-binding response regulator	NA	NA	NA	NA	NA
BBG80902.1|369735_370752_+|holin	choline-binding protein J	holin	NA	NA	NA	NA
BBG80903.1|370873_371752_+	mevalonate kinase	NA	NA	NA	NA	NA
BBG80904.1|371733_372687_+	diphosphomevalonate decarboxylase	NA	NA	NA	NA	NA
BBG80905.1|372673_373681_+	phosphomevalonate kinase	NA	NA	NA	NA	NA
BBG80906.1|373664_374675_+	isopentenyl-diphosphate delta-isomerase	NA	NA	NA	NA	NA
BBG80907.1|374752_375451_+	transporter	NA	NA	NA	NA	NA
BBG80908.1|375447_376443_+	sensor histidine kinase	NA	NA	NA	NA	NA
BBG80909.1|376456_377089_+	DNA-binding response regulator	NA	NA	NA	NA	NA
BBG80910.1|377151_377331_+	hypothetical protein	NA	NA	NA	NA	NA
BBG80911.1|377312_377567_+	hypothetical protein	NA	NA	NA	NA	NA
BBG80912.1|378007_378247_+	hypothetical protein	NA	NA	NA	NA	NA
BBG80913.1|378327_379149_+	hypothetical protein	NA	NA	NA	NA	NA
BBG80914.1|379167_380190_+|holin	choline-binding protein F	holin	NA	NA	NA	NA
>prophage 3
AP019192	Streptococcus pneumoniae ASP0581 DNA, complete genome	2156271	752911	782698	2156271	protease,integrase,transposase	Bacillus_phage(20.0%)	40	756179:756195	785765:785781
BBG81271.1|752911_753421_+|transposase	transposase	transposase	NA	NA	NA	NA
BBG81272.1|753611_753899_-|transposase	transposase	transposase	NA	NA	NA	NA
BBG81273.1|754139_754364_+	hypothetical protein	NA	NA	NA	NA	NA
BBG81274.1|754487_754655_+	hypothetical protein	NA	NA	NA	NA	NA
BBG81275.1|754603_754927_+	DNA-binding protein	NA	A0A1B1P773	Bacillus_phage	51.9	8.3e-15
BBG81276.1|754988_755477_+|integrase	integrase	integrase	A0A2I6AZV9	Macacine_betaherpesvirus	51.6	3.3e-39
BBG81277.1|755585_755885_-	hypothetical protein	NA	NA	NA	NA	NA
BBG81278.1|756049_756472_-	NUDIX hydrolase	NA	NA	NA	NA	NA
756179:756195	attL	TTCTTTGAAAGGAGTTG	NA	NA	NA	NA
BBG81279.1|756564_756984_+|transposase	transposase	transposase	NA	NA	NA	NA
BBG81280.1|757111_757435_+	hypothetical protein	NA	NA	NA	NA	NA
BBG81281.1|757641_759900_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	K4FB40	Cronobacter_phage	40.4	4.6e-128
BBG81282.1|760128_760359_-	hypothetical protein	NA	NA	NA	NA	NA
BBG81283.1|760548_761232_+	glutamine ABC transporter permease	NA	NA	NA	NA	NA
BBG81284.1|761231_761966_+	peptide ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	42.7	1.8e-36
BBG81285.1|762119_762977_+	bifunctional protein FolD	NA	A0A249XZQ2	Enterococcus_phage	41.5	5.2e-40
BBG81286.1|763119_763992_+	ADP-dependent (S)-NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
BBG81287.1|764273_764957_+	ribose-5-phosphate isomerase A	NA	NA	NA	NA	NA
BBG81288.1|764970_766182_+	phosphopentomutase	NA	NA	NA	NA	NA
BBG81289.1|766183_766726_+	hypothetical protein	NA	NA	NA	NA	NA
BBG81290.1|766741_767551_+	purine nucleoside phosphorylase	NA	NA	NA	NA	NA
BBG81291.1|768047_768422_+	hypothetical protein	NA	NA	NA	NA	NA
BBG81292.1|768431_769007_+	hypothetical protein	NA	NA	NA	NA	NA
BBG81293.1|769031_769544_+	hypothetical protein	NA	NA	NA	NA	NA
BBG81294.1|770197_770908_+	purine nucleoside phosphorylase DeoD-type	NA	NA	NA	NA	NA
BBG81295.1|770930_771455_-	DNA topology modulation protein FlaR	NA	A0A097BYE2	Leuconostoc_phage	41.2	9.0e-27
BBG81296.1|771507_771744_-	30S ribosomal protein S20	NA	NA	NA	NA	NA
BBG81297.1|771811_772732_-	pantothenate kinase	NA	NA	NA	NA	NA
BBG81298.1|772921_773158_+	hypothetical protein	NA	NA	NA	NA	NA
BBG81299.1|773531_774122_+	16S rRNA methyltransferase	NA	NA	NA	NA	NA
BBG81300.1|774118_775396_+	pyrimidine-nucleoside phosphorylase	NA	A0A0H3UZD4	Geobacillus_virus	51.7	3.7e-114
BBG81301.1|775413_776076_+	deoxyribose-phosphate aldolase	NA	NA	NA	NA	NA
BBG81302.1|776062_776452_+	cytidine deaminase	NA	NA	NA	NA	NA
BBG81303.1|776542_777595_+	BMP family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
BBG81304.1|777742_779278_+	sugar ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	33.0	1.7e-20
BBG81305.1|779270_780329_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
BBG81306.1|780331_781288_+	ABC transporter permease	NA	NA	NA	NA	NA
BBG81307.1|781372_781585_+	hypothetical protein	NA	NA	NA	NA	NA
BBG81308.1|781720_781888_+	hypothetical protein	NA	NA	NA	NA	NA
BBG81309.1|781887_782196_+	hypothetical protein	NA	A0A1B1P773	Bacillus_phage	49.4	3.3e-13
BBG81310.1|782209_782698_+|integrase	integrase	integrase	A0A2I6AZV9	Macacine_betaherpesvirus	50.3	8.1e-38
785765:785781	attR	TTCTTTGAAAGGAGTTG	NA	NA	NA	NA
>prophage 4
AP019192	Streptococcus pneumoniae ASP0581 DNA, complete genome	2156271	794658	802000	2156271	transposase	Streptococcus_phage(50.0%)	9	NA	NA
BBG81322.1|794658_795186_-	hypothetical protein	NA	A0A1S5SBP9	Streptococcus_phage	97.7	6.8e-91
BBG81323.1|795182_795470_-	hypothetical protein	NA	A0A1S5SBP9	Streptococcus_phage	98.3	7.9e-25
BBG81324.1|795466_795985_-|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	96.8	5.1e-83
BBG81325.1|796178_796676_+	hypothetical protein	NA	NA	NA	NA	NA
BBG81326.1|796675_798331_+	DNA polymerase III subunit gamma/tau	NA	A0A1L2BWV7	Bacteriophage	33.5	6.5e-47
BBG81327.1|798358_798553_+	hypothetical protein	NA	NA	NA	NA	NA
BBG81328.1|798702_799473_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	28.5	2.5e-09
BBG81329.1|799500_800763_+	Fe-S cluster assembly protein SufD	NA	NA	NA	NA	NA
BBG81330.1|800773_802000_+	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	44.6	1.5e-104
>prophage 5
AP019192	Streptococcus pneumoniae ASP0581 DNA, complete genome	2156271	826273	882035	2156271	holin,transposase	Streptococcus_phage(52.63%)	54	NA	NA
BBG81353.1|826273_826651_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
BBG81354.1|826834_827581_+	hypothetical protein	NA	A0A2H4JAA2	uncultured_Caudovirales_phage	30.5	4.3e-30
BBG81355.1|827603_828122_+	hypothetical protein	NA	NA	NA	NA	NA
BBG81356.1|828151_831502_+	DEAD/DEAH box helicase	NA	A0A2H4P9W3	Gordonia_phage	24.8	2.4e-11
BBG81357.1|831772_831973_+	hypothetical protein	NA	NA	NA	NA	NA
BBG81358.1|832131_833388_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	97.1	5.9e-234
BBG81359.1|833512_833983_-	arginine repressor	NA	NA	NA	NA	NA
BBG81360.1|833999_836273_-	Xaa-Pro dipeptidyl-peptidase	NA	NA	NA	NA	NA
BBG81361.1|836619_839721_+	DNA-directed DNA polymerase	NA	A0A291AWR1	Streptomyces_phage	32.5	1.3e-112
BBG81362.1|839803_840811_+	ATP-dependent 6-phosphofructokinase	NA	NA	NA	NA	NA
BBG81363.1|840869_842375_+	pyruvate kinase	NA	NA	NA	NA	NA
BBG81364.1|843491_843746_-	hypothetical protein	NA	B3GVX0	Streptococcus_phage	60.0	2.2e-18
BBG81365.1|844181_845054_+	membrane protein	NA	NA	NA	NA	NA
BBG81366.1|845160_845544_-	hypothetical protein	NA	NA	NA	NA	NA
BBG81367.1|845686_845998_+	hypothetical protein	NA	NA	NA	NA	NA
BBG81368.1|846001_846718_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
BBG81369.1|846847_847663_-	phosphate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
BBG81370.1|847659_848565_-	hypothetical protein	NA	NA	NA	NA	NA
BBG81371.1|848565_848697_-	hypothetical protein	NA	NA	NA	NA	NA
BBG81372.1|848906_849272_+	hypothetical protein	NA	NA	NA	NA	NA
BBG81373.1|849268_850273_+	hypothetical protein	NA	NA	NA	NA	NA
BBG81374.1|850374_852504_+	RNA-binding transcriptional accessory protein	NA	NA	NA	NA	NA
BBG81375.1|852998_853271_+	membrane protein	NA	NA	NA	NA	NA
BBG81376.1|853318_853483_-	hypothetical protein	NA	NA	NA	NA	NA
BBG81377.1|853624_853816_-	hypothetical protein	NA	NA	NA	NA	NA
BBG81378.1|854243_855002_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.3	7.7e-27
BBG81379.1|855003_856992_+	ABC transporter permease	NA	NA	NA	NA	NA
BBG81380.1|857034_857625_-	membrane protein	NA	NA	NA	NA	NA
BBG81381.1|857704_858580_-|transposase	IS30 family transposase	transposase	H7BWC8	unidentified_phage	31.3	8.0e-28
BBG81382.1|859286_860762_+	lysine decarboxylase	NA	NA	NA	NA	NA
BBG81383.1|860915_861443_-	hypothetical protein	NA	NA	NA	NA	NA
BBG81384.1|861697_862558_+	polyamine aminopropyltransferase	NA	NA	NA	NA	NA
BBG81385.1|862554_863814_+	saccharopine dehydrogenase	NA	NA	NA	NA	NA
BBG81386.1|863813_864941_+	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
BBG81387.1|864937_866023_+	putative agmatine deiminase	NA	M1HES8	Acanthocystis_turfacea_Chlorella_virus	47.5	2.0e-89
BBG81388.1|866032_866908_+	N-carbamoylputrescine amidase	NA	M1H5W0	Paramecium_bursaria_Chlorella_virus	50.0	1.1e-77
BBG81389.1|867088_867898_-	haloacid dehalogenase	NA	NA	NA	NA	NA
BBG81390.1|868169_868391_+	hypothetical protein	NA	NA	NA	NA	NA
BBG81391.1|868810_869116_+	hypothetical protein	NA	NA	NA	NA	NA
BBG81392.1|869357_870266_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	27.7	5.2e-06
BBG81393.1|870262_870724_+	lipoprotein signal peptidase	NA	NA	NA	NA	NA
BBG81394.1|870713_871601_+	pseudouridine synthase	NA	NA	NA	NA	NA
BBG81395.1|871603_873487_+|holin	choline-binding protein E	holin	Q332B9	Clostridium_botulinum_C_phage	23.7	1.5e-10
BBG81396.1|873587_874697_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	58.4	8.4e-115
BBG81397.1|874706_875969_+	gamma-glutamyl phosphate reductase	NA	A0A1X9I5D4	Streptococcus_phage	65.0	4.5e-141
BBG81398.1|875972_876770_+	pyrroline-5-carboxylate reductase	NA	A0A1X9I6T5	Streptococcus_phage	49.8	8.0e-59
BBG81399.1|876989_877628_+	thymidylate kinase	NA	M1PSC7	Streptococcus_phage	67.6	4.9e-75
BBG81400.1|877624_878515_+	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	52.0	1.5e-74
BBG81401.1|878551_878869_+	initiation-control protein YabA	NA	M1PFV3	Streptococcus_phage	60.0	2.9e-28
BBG81402.1|878871_879741_+	ribosomal RNA small subunit methyltransferase I	NA	M1PLC5	Streptococcus_phage	76.1	2.7e-116
BBG81403.1|879967_880486_+	hypothetical protein	NA	NA	NA	NA	NA
BBG81404.1|880594_881242_+	hypothetical protein	NA	A0A2P0VK56	Streptococcus_phage	33.7	7.0e-13
BBG81405.1|881230_881575_-|transposase	transposase	transposase	NA	NA	NA	NA
BBG81406.1|881645_882035_-|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 6
AP019192	Streptococcus pneumoniae ASP0581 DNA, complete genome	2156271	1068866	1092616	2156271	transposase	Streptococcus_phage(85.0%)	20	NA	NA
BBG81595.1|1068866_1071680_+	amidase	NA	Q4Z9D9	Staphylococcus_phage	40.4	1.2e-08
BBG81596.1|1072246_1072561_+	hypothetical protein	NA	A0A1S5SF38	Streptococcus_phage	100.0	5.2e-54
BBG81597.1|1072576_1072963_+	hypothetical protein	NA	A0A1S5SF96	Streptococcus_phage	100.0	3.0e-64
BBG81598.1|1073098_1074376_+	cell division protein FtsK	NA	A0A1S5SFB5	Streptococcus_phage	99.8	2.9e-244
BBG81599.1|1074553_1075972_+	replication initiation protein	NA	A0A1S5SEX3	Streptococcus_phage	99.0	6.3e-232
BBG81600.1|1076228_1076966_+	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NA	E4ZFQ0	Streptococcus_phage	99.2	3.1e-134
BBG81601.1|1077321_1078470_-|transposase	ISL3 family transposase	transposase	Q6V7R1	Burkholderia_virus	27.8	1.4e-11
BBG81602.1|1078649_1078871_+	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	100.0	4.3e-31
BBG81603.1|1078987_1079485_+	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	100.0	1.7e-91
BBG81604.1|1079573_1079966_+	hypothetical protein	NA	A0A1S5SEX7	Streptococcus_phage	100.0	3.2e-69
BBG81605.1|1079949_1082397_+	ATP/GTP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	100.0	0.0e+00
BBG81606.1|1082399_1084577_+	hypothetical protein	NA	A0A1S5SF30	Streptococcus_phage	100.0	0.0e+00
BBG81607.1|1084573_1085575_+	peptidase P60	NA	A0A1S5SEZ8	Streptococcus_phage	95.8	7.7e-184
BBG81608.1|1085589_1086504_+	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	92.4	9.5e-157
BBG81609.1|1086880_1088800_+	tetracycline resistance ribosomal protection protein Tet(M)	NA	A0A2K5B2A5	Erysipelothrix_phage	97.8	0.0e+00
BBG81610.1|1089145_1089499_-	transcriptional regulator	NA	A0A1S5SFA6	Streptococcus_phage	100.0	1.3e-58
BBG81611.1|1090003_1090426_+	DNA-binding protein	NA	A0A1S5SEW0	Streptococcus_phage	100.0	2.5e-72
BBG81612.1|1090422_1090653_+	hypothetical protein	NA	A0A1S5SEX1	Streptococcus_phage	100.0	2.7e-36
BBG81613.1|1091113_1091317_+	excisionase	NA	A0A1S5SF07	Streptococcus_phage	100.0	4.0e-31
BBG81614.1|1091398_1092616_+|transposase	transposase	transposase	A0A1S5SEW7	Streptococcus_phage	100.0	3.7e-233
>prophage 7
AP019192	Streptococcus pneumoniae ASP0581 DNA, complete genome	2156271	1115590	1123595	2156271	integrase	Streptococcus_phage(87.5%)	10	1117360:1117374	1124358:1124372
BBG81637.1|1115590_1116274_+	transcriptional regulator	NA	E8ZDN4	Streptococcus_phage	52.7	8.3e-65
BBG81638.1|1116276_1117692_+	hypothetical protein	NA	M1Q231	Streptococcus_phage	72.6	1.5e-201
1117360:1117374	attL	CAAATGAAAATTGAA	NA	NA	NA	NA
BBG81639.1|1117691_1118054_+	hypothetical protein	NA	A0A1B0RXA8	Streptococcus_phage	45.0	1.1e-20
BBG81640.1|1118043_1118334_+	hypothetical protein	NA	Q6DMX6	Streptococcus_phage	52.7	3.1e-21
BBG81641.1|1118628_1118985_+	hypothetical protein	NA	NA	NA	NA	NA
BBG81642.1|1118989_1119355_+	hypothetical protein	NA	NA	NA	NA	NA
BBG81643.1|1119341_1121171_+	relaxase	NA	A0A1B0RXG0	Streptococcus_phage	37.5	3.6e-06
BBG81644.1|1121274_1121502_+	transcriptional regulator	NA	A0A0A7RUJ5	Clostridium_phage	46.9	1.0e-06
BBG81645.1|1121768_1122002_+	excisionase	NA	W6LM55	Streptococcus_phage	50.7	4.6e-15
BBG81646.1|1122086_1123595_+|integrase	site-specific integrase	integrase	M1NRJ9	Streptococcus_phage	27.6	8.4e-25
1124358:1124372	attR	CAAATGAAAATTGAA	NA	NA	NA	NA
>prophage 8
AP019192	Streptococcus pneumoniae ASP0581 DNA, complete genome	2156271	1232607	1269076	2156271	protease,holin,transposase	Indivirus(20.0%)	41	NA	NA
BBG81752.1|1232607_1233477_-|holin	choline kinase	holin	NA	NA	NA	NA
BBG81753.1|1233493_1234516_-	ribulose-5-phosphate reductase	NA	NA	NA	NA	NA
BBG81754.1|1234520_1235228_-	ribitol-5-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
BBG81755.1|1235563_1237051_+	polysaccharide biosynthesis protein MviN	NA	NA	NA	NA	NA
BBG81756.1|1237060_1237864_+|holin	phosphorylcholine transferase LicD	holin	A0A1V0SD50	Indivirus	27.1	5.3e-10
BBG81757.1|1237865_1238675_+|holin	phosphorylcholine transferase LicD	holin	A0A1V0SD50	Indivirus	30.3	9.1e-10
BBG81758.1|1238950_1242127_-	carbamoyl-phosphate synthase large chain	NA	NA	NA	NA	NA
BBG81759.1|1242438_1243518_-	carbamoyl-phosphate synthase small chain	NA	R4TGJ8	Halovirus	35.9	6.3e-59
BBG81760.1|1243567_1244491_-	aspartate carbamoyltransferase	NA	M1HGA5	Paramecium_bursaria_Chlorella_virus	31.7	5.1e-25
BBG81761.1|1244509_1245031_-	bifunctional protein PyrR	NA	NA	NA	NA	NA
BBG81762.1|1245241_1245871_-	endonuclease III	NA	NA	NA	NA	NA
BBG81763.1|1245870_1246413_-	DNA-binding protein	NA	NA	NA	NA	NA
BBG81764.1|1247137_1248697_+	ABC transporter ATP-binding protein	NA	A0A1B0RXA0	Streptococcus_phage	27.0	2.1e-10
BBG81765.1|1248845_1249745_-|protease	protease HtpX	protease	NA	NA	NA	NA
BBG81766.1|1249746_1250307_-	membrane protein	NA	NA	NA	NA	NA
BBG81767.1|1250400_1251114_+	ribosomal RNA small subunit methyltransferase G	NA	NA	NA	NA	NA
BBG81768.1|1251367_1252651_+	uracil permease	NA	Q9KX94	Enterobacteria_phage	35.3	3.1e-60
BBG81769.1|1252845_1254417_-	signal recognition particle protein	NA	NA	NA	NA	NA
BBG81770.1|1254428_1254761_-	UPF0122 protein	NA	NA	NA	NA	NA
BBG81771.1|1254850_1255228_-	hypothetical protein	NA	NA	NA	NA	NA
BBG81772.1|1255299_1256604_+	phosphohydrolase	NA	E3T4P8	Cafeteria_roenbergensis_virus	29.8	5.0e-26
BBG81773.1|1256616_1257423_+	sugar phosphate phosphatase	NA	NA	NA	NA	NA
BBG81774.1|1257591_1257939_-	50S ribosomal protein L19	NA	NA	NA	NA	NA
BBG81775.1|1258057_1258387_-	putative fluoride ion transporter CrcB 1	NA	A0A2H4PQR0	Staphylococcus_phage	37.8	6.3e-10
BBG81776.1|1258380_1258755_-	putative fluoride ion transporter CrcB 2	NA	NA	NA	NA	NA
BBG81777.1|1258751_1259018_-	hypothetical protein	NA	NA	NA	NA	NA
BBG81778.1|1259133_1259577_-	flavodoxin	NA	NA	NA	NA	NA
BBG81779.1|1259680_1260616_+	DHH family phosphoesterase	NA	NA	NA	NA	NA
BBG81780.1|1260711_1260954_+	50S ribosomal protein L31 type B	NA	NA	NA	NA	NA
BBG81781.1|1261010_1261229_-	hypothetical protein	NA	NA	NA	NA	NA
BBG81782.1|1261536_1261788_-	hypothetical protein	NA	NA	NA	NA	NA
BBG81783.1|1262313_1263660_+	glutamate dehydrogenase	NA	NA	NA	NA	NA
BBG81784.1|1264155_1264326_-	hypothetical protein	NA	NA	NA	NA	NA
BBG81785.1|1264338_1264686_-	hypothetical protein	NA	G9BWD6	Planktothrix_phage	42.5	1.5e-09
BBG81786.1|1265111_1265417_-	hypothetical protein	NA	NA	NA	NA	NA
BBG81787.1|1265531_1266128_+	hypothetical protein	NA	NA	NA	NA	NA
BBG81788.1|1266398_1266695_-	hypothetical protein	NA	NA	NA	NA	NA
BBG81789.1|1266707_1266851_-	hypothetical protein	NA	NA	NA	NA	NA
BBG81790.1|1266852_1267140_-	hypothetical protein	NA	NA	NA	NA	NA
BBG81791.1|1267724_1268228_+|transposase	transposase	transposase	NA	NA	NA	NA
BBG81792.1|1268236_1269076_+|transposase	transposase	transposase	A0A1B1P773	Bacillus_phage	49.6	1.1e-63
>prophage 9
AP019192	Streptococcus pneumoniae ASP0581 DNA, complete genome	2156271	1366876	1416786	2156271	holin,transposase,tRNA	Streptococcus_phage(25.0%)	59	NA	NA
BBG81897.1|1366876_1368133_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	100.0	3.6e-239
BBG81898.1|1368566_1369853_-	peptidase	NA	Q6DW11	Phage_TP	31.1	2.1e-40
BBG81899.1|1370214_1370427_+	hypothetical protein	NA	NA	NA	NA	NA
BBG81900.1|1370476_1370626_+	hypothetical protein	NA	NA	NA	NA	NA
BBG81901.1|1370842_1371022_+	hypothetical protein	NA	NA	NA	NA	NA
BBG81902.1|1371029_1372220_+	methyltransferase	NA	S0A0D5	Cellulophaga_phage	38.4	5.4e-43
BBG81903.1|1372734_1373727_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
BBG81904.1|1373886_1375641_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.7	1.1e-23
BBG81905.1|1375624_1377346_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	8.4e-29
BBG81906.1|1377356_1377743_+	hypothetical protein	NA	NA	NA	NA	NA
BBG81907.1|1377707_1378085_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
BBG81908.1|1378096_1378522_-	hypothetical protein	NA	NA	NA	NA	NA
BBG81909.1|1378655_1378814_+	hypothetical protein	NA	NA	NA	NA	NA
BBG81910.1|1378813_1379509_+	putative ABC transporter	NA	NA	NA	NA	NA
BBG81911.1|1379496_1380861_+	hypothetical protein	NA	G3M9Y6	Bacillus_virus	27.1	3.5e-14
BBG81912.1|1381315_1381759_-	hypothetical protein	NA	NA	NA	NA	NA
BBG81913.1|1381748_1381946_-	hypothetical protein	NA	NA	NA	NA	NA
BBG81914.1|1382197_1383454_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	99.3	3.4e-237
BBG81915.1|1383539_1385102_-	GMP synthase [glutamine-hydrolyzing]	NA	A0A1V0SH76	Hokovirus	32.8	1.4e-19
BBG81916.1|1385243_1385942_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
BBG81917.1|1385984_1386881_-	DMT multidrug transporter	NA	NA	NA	NA	NA
BBG81918.1|1386889_1387825_-	serine hydrolase	NA	NA	NA	NA	NA
BBG81919.1|1387821_1388547_-	proteinase	NA	NA	NA	NA	NA
BBG81920.1|1388630_1389266_-|holin	1-alkyl-2-acetylglycerophosphocholine esterase	holin	A0A2K9L661	Tupanvirus	28.7	6.7e-08
BBG81921.1|1389267_1390095_-	haloacid dehalogenase	NA	NA	NA	NA	NA
BBG81922.1|1390198_1390453_-	hypothetical protein	NA	NA	NA	NA	NA
BBG81923.1|1390453_1390966_-	hypothetical protein	NA	A0A0N9SJ77	Staphylococcus_phage	32.4	2.4e-16
BBG81924.1|1391059_1391182_-	hypothetical protein	NA	NA	NA	NA	NA
BBG81925.1|1391694_1392306_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	42.4	4.9e-16
BBG81926.1|1392350_1393079_+	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
BBG81927.1|1393117_1394029_-	thioredoxin reductase	NA	G3MA85	Bacillus_virus	51.8	4.5e-90
BBG81928.1|1394094_1394331_-	amino acid ABC transporter	NA	NA	NA	NA	NA
BBG81929.1|1394396_1395140_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	40.5	4.7e-29
BBG81930.1|1395139_1395940_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
BBG81931.1|1396097_1396454_-	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	57.3	1.2e-33
BBG81932.1|1396447_1396978_-	methylated-DNA--protein-cysteine methyltransferase	NA	M1PFU9	Streptococcus_phage	54.3	1.4e-46
BBG81933.1|1396977_1397472_-	N-acetyltransferase	NA	M1PSC3	Streptococcus_phage	52.8	8.5e-43
BBG81934.1|1397606_1398053_+	hypothetical protein	NA	NA	NA	NA	NA
BBG81935.1|1398049_1398697_+	hemolysin	NA	NA	NA	NA	NA
BBG81936.1|1398717_1399299_-	pyridoxal 5'-phosphate synthase subunit PdxT	NA	NA	NA	NA	NA
BBG81937.1|1399299_1400175_-	pyridoxal 5'-phosphate synthase subunit PdxS	NA	NA	NA	NA	NA
BBG81938.1|1400326_1401706_-	NADH oxidase	NA	NA	NA	NA	NA
BBG81939.1|1401999_1402923_+	FAD:protein FMN transferase	NA	NA	NA	NA	NA
BBG81940.1|1402982_1403588_+	FMN reductase	NA	A0A2P0ZL77	Lactobacillus_phage	54.2	7.7e-54
BBG81941.1|1403606_1404851_+	oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	52.7	1.7e-55
BBG81942.1|1405073_1405331_-	UPF0291 protein	NA	NA	NA	NA	NA
BBG81943.1|1405372_1407409_-|tRNA	glycine--tRNA ligase beta subunit	tRNA	NA	NA	NA	NA
BBG81944.1|1407620_1408538_-|tRNA	glycine--tRNA ligase alpha subunit	tRNA	NA	NA	NA	NA
BBG81945.1|1408732_1409059_-	hypothetical protein	NA	NA	NA	NA	NA
BBG81946.1|1409025_1409310_-	hypothetical protein	NA	NA	NA	NA	NA
BBG81947.1|1409582_1410425_-	2,5-diketo-D-gluconic acid reductase	NA	A0A2H4PQR8	Staphylococcus_phage	40.2	1.3e-51
BBG81948.1|1410538_1411876_-	peptidoglycan-N-acetylglucosamine deacetylase	NA	NA	NA	NA	NA
BBG81949.1|1412164_1412410_-	hypothetical protein	NA	NA	NA	NA	NA
BBG81950.1|1412756_1413734_+	oxidoreductase	NA	NA	NA	NA	NA
BBG81951.1|1413730_1414813_+	RNA helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	31.1	1.8e-37
BBG81952.1|1415106_1415484_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
BBG81953.1|1415495_1415921_-	hypothetical protein	NA	NA	NA	NA	NA
BBG81954.1|1415992_1416172_-	hypothetical protein	NA	NA	NA	NA	NA
BBG81955.1|1416279_1416786_-|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 10
AP019192	Streptococcus pneumoniae ASP0581 DNA, complete genome	2156271	1491807	1538243	2156271	protease,transposase,tRNA	Streptococcus_phage(29.41%)	54	NA	NA
BBG82026.1|1491807_1492182_-|transposase	transposase	transposase	NA	NA	NA	NA
BBG82027.1|1492255_1493608_-	phosphoglucosamine mutase	NA	NA	NA	NA	NA
BBG82028.1|1493631_1494411_-	hypothetical protein	NA	NA	NA	NA	NA
BBG82029.1|1494397_1495255_-	ABC transporter permease	NA	NA	NA	NA	NA
BBG82030.1|1495390_1496359_+	ferredoxin--NADP reductase	NA	Q9JRK7	Streptococcus_phage	100.0	2.8e-66
BBG82031.1|1496392_1497304_-	putative sporulation transcription regulator WhiA	NA	Q7AWZ3	Streptococcus_phage	99.7	2.0e-154
BBG82032.1|1497300_1498278_-	putative gluconeogenesis factor	NA	A1IMD5	Streptococcus_phage	100.0	1.2e-184
BBG82033.1|1498274_1499165_-	nucleotide-binding protein	NA	A0A0R8VB27	Thermobifida_phage	29.8	3.9e-06
BBG82034.1|1499216_1499597_-	hypothetical protein	NA	NA	NA	NA	NA
BBG82035.1|1499607_1500195_-	putative GTP-binding protein EngB	NA	NA	NA	NA	NA
BBG82036.1|1500203_1501436_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	59.0	9.3e-131
BBG82037.1|1501637_1502144_-	dihydrofolate reductase	NA	G3MBI7	Bacillus_virus	42.5	3.0e-27
BBG82038.1|1502273_1502792_-	DNA starvation/stationary phase protection protein	NA	NA	NA	NA	NA
BBG82039.1|1503375_1504632_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	97.1	5.9e-234
BBG82040.1|1504711_1506184_-	1,4-beta-N-acetylmuramidase	NA	NA	NA	NA	NA
BBG82041.1|1506254_1507013_-	triosephosphate isomerase	NA	NA	NA	NA	NA
BBG82042.1|1507110_1507788_-	DNA replication protein DnaD	NA	A0A1X9I617	Streptococcus_phage	50.0	1.1e-05
BBG82043.1|1507796_1508741_-	homoserine O-succinyltransferase	NA	NA	NA	NA	NA
BBG82044.1|1508780_1508936_+	hypothetical protein	NA	NA	NA	NA	NA
BBG82045.1|1508922_1509435_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	47.3	9.1e-32
BBG82046.1|1509521_1510280_-	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
BBG82047.1|1510780_1511911_-	sugar ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.2	4.7e-20
BBG82048.1|1512360_1512936_-	isochorismatase	NA	G3MA16	Bacillus_virus	35.9	3.3e-22
BBG82049.1|1512935_1513724_-	GTP-sensing transcriptional pleiotropic repressor CodY	NA	NA	NA	NA	NA
BBG82050.1|1513987_1515562_-	DEAD-box ATP-dependent RNA helicase CshA	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	36.8	2.4e-59
BBG82051.1|1515760_1516987_-	oxalate:formate antiporter	NA	NA	NA	NA	NA
BBG82052.1|1517179_1518496_+	pyridine nucleotide-disulfide oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	44.1	2.2e-98
BBG82053.1|1518594_1519938_+	UDP-N-acetylmuramyl peptide synthase	NA	NA	NA	NA	NA
BBG82054.1|1519937_1520720_+	glutamine amidotransferase	NA	NA	NA	NA	NA
BBG82055.1|1520845_1521928_+	dipeptidase	NA	NA	NA	NA	NA
BBG82056.1|1522252_1523086_-|transposase	transposase	transposase	A0A1B1P773	Bacillus_phage	49.2	4.6e-57
BBG82057.1|1523085_1523253_-	hypothetical protein	NA	NA	NA	NA	NA
BBG82058.1|1523389_1523659_-	DNA-binding protein	NA	NA	NA	NA	NA
BBG82059.1|1523829_1524291_-	membrane protein	NA	NA	NA	NA	NA
BBG82060.1|1524268_1525042_-	hydroxymethylpyrimidine/phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
BBG82061.1|1525031_1525781_-|tRNA	tRNA pseudouridine synthase A	tRNA	NA	NA	NA	NA
BBG82062.1|1526098_1527250_-	MFS transporter	NA	NA	NA	NA	NA
BBG82063.1|1527489_1528119_-	hypothetical protein	NA	NA	NA	NA	NA
BBG82064.1|1528121_1528460_-	hypothetical protein	NA	NA	NA	NA	NA
BBG82065.1|1528590_1529262_-	cytidylate kinase	NA	NA	NA	NA	NA
BBG82066.1|1529270_1529747_-	hypothetical protein	NA	NA	NA	NA	NA
BBG82067.1|1529792_1530005_+	ferredoxin	NA	NA	NA	NA	NA
BBG82068.1|1530066_1531020_-	glycosyl transferase family 2	NA	V5USA4	Oenococcus_phage	50.6	1.0e-76
BBG82069.1|1531021_1532041_-	UDP-glucose 4-epimerase	NA	A0A2K9L5H6	Tupanvirus	48.5	3.6e-88
BBG82070.1|1532143_1532335_-	hypothetical protein	NA	NA	NA	NA	NA
BBG82071.1|1532341_1533445_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
BBG82072.1|1533461_1534259_-	conserved hypothetical protein	NA	NA	NA	NA	NA
BBG82073.1|1534245_1534902_-	Bcl-2 family protein	NA	NA	NA	NA	NA
BBG82074.1|1535470_1535905_+	hypothetical protein	NA	NA	NA	NA	NA
BBG82075.1|1535904_1536084_+	hypothetical protein	NA	NA	NA	NA	NA
BBG82076.1|1536095_1536527_+	hypothetical protein	NA	NA	NA	NA	NA
BBG82077.1|1536645_1537071_+	hypothetical protein	NA	NA	NA	NA	NA
BBG82078.1|1537082_1537460_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
BBG82079.1|1537424_1538243_-|transposase	transposase	transposase	A0A1B1P773	Bacillus_phage	46.6	1.1e-52
>prophage 11
AP019192	Streptococcus pneumoniae ASP0581 DNA, complete genome	2156271	1763821	1771153	2156271		uncultured_Mediterranean_phage(33.33%)	9	NA	NA
BBG82309.1|1763821_1764523_+	UDP-glucose 4-epimerase GalE	NA	A0A2K9L1R4	Tupanvirus	36.1	4.6e-34
BBG82310.1|1765143_1765905_+	ferrichrome ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	39.9	3.3e-46
BBG82311.1|1765894_1766851_+	ferrichrome ABC transporter permease	NA	NA	NA	NA	NA
BBG82312.1|1766847_1767600_+	iron ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	28.1	5.6e-14
BBG82313.1|1767695_1768661_+	iron ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
BBG82314.1|1768885_1769128_-	putative membrane protein insertion efficiency factor	NA	A0A2H4PQM5	Staphylococcus_phage	59.4	1.3e-17
BBG82315.1|1769127_1769850_-	pseudouridine synthase	NA	NA	NA	NA	NA
BBG82316.1|1769836_1770406_-	segregation and condensation protein B	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	34.9	5.0e-15
BBG82317.1|1770424_1771153_-	segregation and condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	22.3	6.9e-09
>prophage 12
AP019192	Streptococcus pneumoniae ASP0581 DNA, complete genome	2156271	2134027	2142781	2156271		Streptococcus_phage(33.33%)	9	NA	NA
BBG82663.1|2134027_2134867_-	energy-coupling factor transporter ATP-binding protein EcfA2	NA	W8CYL7	Bacillus_phage	32.6	1.1e-15
BBG82664.1|2134851_2135679_-	energy-coupling factor transporter ATP-binding protein EcfA1	NA	G9BWD6	Planktothrix_phage	32.9	2.1e-22
BBG82665.1|2135675_2136221_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
BBG82666.1|2136231_2137062_-	DNA-binding protein	NA	NA	NA	NA	NA
BBG82667.1|2137094_2138378_-	peptidase M16	NA	A0A1E1EST3	Acanthamoeba_castellanii_mimivirus	30.0	1.1e-17
BBG82668.1|2138374_2139625_-	peptidase M16	NA	A0A1X9I714	Streptococcus_phage	42.3	3.5e-93
BBG82669.1|2139783_2140152_+	hypothetical protein	NA	A0A1X9I5V8	Streptococcus_phage	57.3	7.0e-18
BBG82670.1|2140154_2141252_+	DNA replication and repair protein RecF	NA	NA	NA	NA	NA
BBG82671.1|2141302_2142781_-	inosine-5'-monophosphate dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.3	4.9e-94
