The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
AP018937	Streptococcus pneumoniae HU-OH DNA, complete genome	2058492	40125	51581	2058492		Synechococcus_phage(33.33%)	7	NA	NA
BBG36072.1|40125_42279_+	Lactococcin-G-processing and transport	NA	W8CYL7	Bacillus_phage	27.8	4.0e-44
BBG36073.1|42291_43641_+	Lactococcin A secretion protein LcnD	NA	NA	NA	NA	NA
BBG36074.1|43810_44518_+	Phosphoribosylaminoimidazole-succinocarboxamide	NA	A0A1D8KNF0	Synechococcus_phage	39.2	1.0e-41
BBG36075.1|44719_48445_+	Phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	25.9	5.6e-38
BBG36076.1|48537_49980_+	Amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	35.1	5.7e-55
BBG36077.1|50016_51039_+	Phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A1D7SE90	Cyanophage	43.9	7.3e-65
BBG36078.1|51035_51581_+	Phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.0	7.4e-24
>prophage 2
AP018937	Streptococcus pneumoniae HU-OH DNA, complete genome	2058492	738810	746152	2058492		Streptococcus_phage(50.0%)	9	NA	NA
BBG36763.1|738810_739338_-	hypothetical protein	NA	A0A1S5SBP9	Streptococcus_phage	95.4	6.4e-89
BBG36764.1|739334_739622_-	hypothetical protein	NA	A0A1S5SBP9	Streptococcus_phage	71.8	8.7e-24
BBG36765.1|739618_740137_-	hypothetical protein	NA	A0A1S5SBP9	Streptococcus_phage	95.5	1.7e-81
BBG36766.1|740330_740828_+	Free methionine-R-sulfoxide reductase	NA	NA	NA	NA	NA
BBG36767.1|740827_742483_+	DNA polymerase III subunit tau	NA	A0A1L2BWV7	Bacteriophage	33.5	1.1e-46
BBG36768.1|742510_742705_+	hypothetical protein	NA	NA	NA	NA	NA
BBG36769.1|742854_743625_+	putative ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	28.5	2.5e-09
BBG36770.1|743652_744915_+	FeS cluster assembly protein SufB	NA	NA	NA	NA	NA
BBG36771.1|744925_746152_+	Cysteine desulfurase SufS	NA	Q2XUY6	environmental_halophage	44.8	2.5e-104
>prophage 3
AP018937	Streptococcus pneumoniae HU-OH DNA, complete genome	2058492	807932	818328	2058492		Streptococcus_phage(70.0%)	11	NA	NA
BBG36827.1|807932_808841_+	HTH-type transcriptional regulator CysB	NA	A0A2P0ZL89	Lactobacillus_phage	27.7	5.2e-06
BBG36828.1|808837_809299_+	Lipoprotein signal peptidase	NA	NA	NA	NA	NA
BBG36829.1|809288_810176_+	Ribosomal large subunit pseudouridine synthase	NA	A0A2H4UV25	Bodo_saltans_virus	28.0	1.3e-09
BBG36830.1|810178_812062_+	Autolysin	NA	Q332B9	Clostridium_botulinum_C_phage	23.7	9.5e-10
BBG36831.1|812162_813272_+	Glutamate 5-kinase 1	NA	A0A1X9I5D0	Streptococcus_phage	58.4	1.4e-114
BBG36832.1|813281_814544_+	Gamma-glutamyl phosphate reductase	NA	A0A1X9I5D4	Streptococcus_phage	64.0	7.2e-139
BBG36833.1|814547_815345_+	Pyrroline-5-carboxylate reductase	NA	A0A1X9I6T5	Streptococcus_phage	50.2	8.0e-59
BBG36834.1|815564_816203_+	Thymidylate kinase	NA	M1PSC7	Streptococcus_phage	68.1	9.8e-76
BBG36835.1|816199_817090_+	DNA polymerase III subunit gamma/tau	NA	M1NSC1	Streptococcus_phage	51.0	5.4e-72
BBG36836.1|817129_817447_+	Initiation-control protein YabA	NA	M1PFV3	Streptococcus_phage	60.0	2.9e-28
BBG36837.1|817449_818328_+	Ribosomal RNA small subunit methyltransferase I	NA	M1PLC5	Streptococcus_phage	75.4	8.7e-115
>prophage 4
AP018937	Streptococcus pneumoniae HU-OH DNA, complete genome	2058492	1033779	1067164	2058492		Streptococcus_phage(82.61%)	24	NA	NA
BBG37048.1|1033779_1036593_+	N-acetylmuramoyl-L-alanine amidase	NA	Q4Z9D9	Staphylococcus_phage	40.4	1.2e-08
BBG37049.1|1036997_1038215_-	Transposase from transposon Tn916	NA	A0A1S5SEW7	Streptococcus_phage	100.0	3.7e-233
BBG37050.1|1038296_1038500_-	hypothetical protein	NA	A0A1S5SF07	Streptococcus_phage	100.0	4.0e-31
BBG37051.1|1038960_1039191_-	hypothetical protein	NA	A0A1S5SEX1	Streptococcus_phage	100.0	2.7e-36
BBG37052.1|1039187_1039610_-	hypothetical protein	NA	A0A1S5SEW0	Streptococcus_phage	100.0	2.5e-72
BBG37053.1|1040114_1040354_+	hypothetical protein	NA	A0A1S5SFA6	Streptococcus_phage	100.0	9.1e-35
BBG37054.1|1040409_1043328_-	hypothetical protein	NA	A0A1B0V7H9	Salmonella_phage	36.1	1.1e-169
BBG37055.1|1043331_1043886_-	DNA-invertase hin	NA	A0A0F7LA37	Escherichia_phage	52.1	2.3e-36
BBG37056.1|1044104_1044236_-	hypothetical protein	NA	E4ZFP9	Streptococcus_phage	90.7	8.2e-14
BBG37057.1|1044240_1044978_-	rRNA adenine N-6-methyltransferase	NA	E4ZFQ0	Streptococcus_phage	99.6	1.4e-134
BBG37058.1|1045902_1047822_-	Tetracycline resistance protein TetM from	NA	A0A1S5SF82	Streptococcus_phage	98.1	0.0e+00
BBG37059.1|1048198_1049116_-	hypothetical protein	NA	A0A1S5SF22	Streptococcus_phage	99.0	1.0e-166
BBG37060.1|1049130_1050132_-	putative endopeptidase p60	NA	A0A1S5SEZ8	Streptococcus_phage	99.7	6.5e-191
BBG37061.1|1050128_1052240_-	hypothetical protein	NA	A0A1S5SF30	Streptococcus_phage	99.9	0.0e+00
BBG37062.1|1052308_1054756_-	hypothetical protein	NA	A0A1S5SF64	Streptococcus_phage	99.8	0.0e+00
BBG37063.1|1054739_1055246_-	hypothetical protein	NA	A0A1S5SEX7	Streptococcus_phage	100.0	8.6e-91
BBG37064.1|1055220_1055718_-	hypothetical protein	NA	A0A1S5SF25	Streptococcus_phage	99.4	4.9e-91
BBG37065.1|1055834_1056056_-	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	100.0	4.3e-31
BBG37066.1|1056403_1057303_-	hypothetical protein	NA	A0A1S5SEX3	Streptococcus_phage	100.0	3.9e-155
BBG37067.1|1057480_1058866_-	DNA translocase FtsK	NA	A0A1S5SFB5	Streptococcus_phage	100.0	1.1e-265
BBG37068.1|1058894_1059278_-	hypothetical protein	NA	A0A1S5SF96	Streptococcus_phage	100.0	2.3e-64
BBG37069.1|1059296_1059611_-	hypothetical protein	NA	A0A1S5SF38	Streptococcus_phage	100.0	5.2e-54
BBG37070.1|1060487_1060898_+	hypothetical protein	NA	NA	NA	NA	NA
BBG37071.1|1060945_1067164_+	hypothetical protein	NA	A0A248SL14	Klebsiella_phage	30.4	4.6e-218
>prophage 5
AP018937	Streptococcus pneumoniae HU-OH DNA, complete genome	2058492	1080004	1088009	2058492		Streptococcus_phage(87.5%)	10	NA	NA
BBG37089.1|1080004_1080688_+	HTH-type transcriptional regulator PrtR	NA	E8ZDN4	Streptococcus_phage	52.7	8.3e-65
BBG37090.1|1080690_1082106_+	DNA polymerase IV	NA	M1Q231	Streptococcus_phage	72.8	6.8e-202
BBG37091.1|1082105_1082468_+	hypothetical protein	NA	A0A1B0RXA8	Streptococcus_phage	45.0	1.1e-20
BBG37092.1|1082457_1082748_+	hypothetical protein	NA	Q6DMX6	Streptococcus_phage	52.7	3.1e-21
BBG37093.1|1083042_1083399_+	hypothetical protein	NA	NA	NA	NA	NA
BBG37094.1|1083403_1083769_+	hypothetical protein	NA	NA	NA	NA	NA
BBG37095.1|1083755_1085585_+	hypothetical protein	NA	A0A1B0RXG0	Streptococcus_phage	37.5	3.6e-06
BBG37096.1|1085688_1085916_+	hypothetical protein	NA	A0A0A7RUJ5	Clostridium_phage	46.9	1.0e-06
BBG37097.1|1086182_1086416_+	hypothetical protein	NA	W6LM55	Streptococcus_phage	50.7	4.6e-15
BBG37098.1|1086500_1088009_+	Transposase from transposon Tn916	NA	M1NRJ9	Streptococcus_phage	27.6	8.4e-25
>prophage 6
AP018937	Streptococcus pneumoniae HU-OH DNA, complete genome	2058492	1328412	1334189	2058492	tRNA	Streptococcus_phage(50.0%)	9	NA	NA
BBG37350.1|1328412_1329024_+	Peptide deformylase	NA	E3SLL2	Synechococcus_phage	42.4	4.9e-16
BBG37351.1|1329068_1329797_+|tRNA	Putative TrmH family tRNA/rRNA	tRNA	NA	NA	NA	NA
BBG37352.1|1329834_1330746_-	Thioredoxin reductase	NA	G3MA85	Bacillus_virus	51.5	2.9e-89
BBG37353.1|1330811_1331036_-	hypothetical protein	NA	NA	NA	NA	NA
BBG37354.1|1331113_1331857_-	L-cystine import ATP-binding protein TcyN	NA	G9BWD6	Planktothrix_phage	41.0	1.6e-29
BBG37355.1|1331856_1332657_-	putative amino-acid permease protein YxeN	NA	NA	NA	NA	NA
BBG37356.1|1332814_1333171_-	Regulatory protein MgsR	NA	M1PLC0	Streptococcus_phage	57.3	1.2e-33
BBG37357.1|1333164_1333695_-	Methylated-DNA--protein-cysteine	NA	M1PFU9	Streptococcus_phage	54.3	1.4e-46
BBG37358.1|1333694_1334189_-	hypothetical protein	NA	M1PSC3	Streptococcus_phage	52.1	1.9e-42
>prophage 7
AP018937	Streptococcus pneumoniae HU-OH DNA, complete genome	2058492	1424574	1431328	2058492	protease	Streptococcus_phage(50.0%)	9	NA	NA
BBG37449.1|1424574_1425543_+	Ferredoxin--NADP reductase 2	NA	Q9JRK7	Streptococcus_phage	99.2	4.8e-66
BBG37450.1|1425576_1426488_-	Putative sporulation transcription regulator	NA	Q7AWZ3	Streptococcus_phage	99.7	1.5e-154
BBG37451.1|1426484_1427462_-	Putative gluconeogenesis factor	NA	A1IMD5	Streptococcus_phage	99.7	5.7e-184
BBG37452.1|1427458_1428349_-	Nucleotide-binding protein YvcJ	NA	A0A0R8VB27	Thermobifida_phage	29.8	5.1e-06
BBG37453.1|1428400_1428781_-	2-iminobutanoate/2-iminopropanoate deaminase	NA	NA	NA	NA	NA
BBG37454.1|1428791_1429379_-	putative GTP-binding protein EngB	NA	NA	NA	NA	NA
BBG37455.1|1429387_1430620_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	G3M9Z9	Bacillus_virus	59.0	4.2e-131
BBG37456.1|1430651_1430822_-	hypothetical protein	NA	NA	NA	NA	NA
BBG37457.1|1430821_1431328_-	Dihydrofolate reductase	NA	G3MBI7	Bacillus_virus	42.5	6.7e-27
>prophage 8
AP018937	Streptococcus pneumoniae HU-OH DNA, complete genome	2058492	1675174	1682506	2058492		uncultured_Mediterranean_phage(33.33%)	9	NA	NA
BBG37703.1|1675174_1675876_+	UDP-glucose 4-epimerase	NA	A0A2K9L1R4	Tupanvirus	36.5	1.6e-34
BBG37704.1|1676298_1677258_+	Iron-uptake system permease protein FeuB	NA	A0A2H4IY97	uncultured_Caudovirales_phage	40.8	2.4e-57
BBG37705.1|1677247_1678204_+	Ferric enterobactin transport system permease	NA	NA	NA	NA	NA
BBG37706.1|1678200_1678953_+	Iron(3+)-hydroxamate import ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	30.2	1.4e-12
BBG37707.1|1679048_1680014_+	putative ABC transporter solute-binding protein	NA	NA	NA	NA	NA
BBG37708.1|1680238_1680481_-	Putative membrane protein insertion efficiency	NA	A0A2H4PQM5	Staphylococcus_phage	59.4	1.3e-17
BBG37709.1|1680480_1681203_-	Ribosomal large subunit pseudouridine synthase	NA	NA	NA	NA	NA
BBG37710.1|1681189_1681759_-	Segregation and condensation protein B	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	34.9	5.0e-15
BBG37711.1|1681777_1682506_-	Segregation and condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	22.3	9.0e-09
>prophage 9
AP018937	Streptococcus pneumoniae HU-OH DNA, complete genome	2058492	2036148	2044902	2058492	protease	Bacillus_phage(33.33%)	9	NA	NA
BBG38040.1|2036148_2036988_-	Energy-coupling factor transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	32.6	1.1e-15
BBG38041.1|2036972_2037800_-	Energy-coupling factor transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	33.3	4.6e-17
BBG38042.1|2037796_2038342_-	CDP-diacylglycerol--glycerol-3-phosphate	NA	NA	NA	NA	NA
BBG38043.1|2038352_2039174_-	Cytoskeleton protein RodZ	NA	NA	NA	NA	NA
BBG38044.1|2039215_2040499_-|protease	putative zinc protease	protease	A0A1E1EST3	Acanthamoeba_castellanii_mimivirus	29.5	1.9e-17
BBG38045.1|2040495_2041746_-|protease	putative zinc protease	protease	A0A1X9I714	Streptococcus_phage	42.3	2.0e-93
BBG38046.1|2041904_2042273_+	hypothetical protein	NA	A0A1X9I5V8	Streptococcus_phage	57.3	7.0e-18
BBG38047.1|2042275_2043373_+	DNA replication and repair protein RecF	NA	NA	NA	NA	NA
BBG38048.1|2043423_2044902_-	Inosine-5'-monophosphate dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.5	2.2e-94
