The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP034445	Mesorhizobium sp. M2A.F.Ca.ET.043.02.1.1 chromosome, complete genome	6700763	431107	439481	6700763	tRNA	uncultured_Mediterranean_phage(85.71%)	9	NA	NA
AZO01988.1|431107_432628_-	LysM peptidoglycan-binding domain-containing protein	NA	S6B1Q4	Bacillus_phage	37.5	5.3e-11
AZO01989.1|432888_433542_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	39.1	1.6e-17
AZO01990.1|433572_434331_-	5'/3'-nucleotidase SurE	NA	NA	NA	NA	NA
AZO01991.1|434335_435640_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	57.2	2.8e-101
AZO01992.1|435742_436609_-	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	43.8	1.9e-45
AZO01993.1|436605_437331_-	twin-arginine translocase subunit TatB	NA	NA	NA	NA	NA
AZO01994.1|437413_437632_-	twin-arginine translocase TatA/TatE family subunit	NA	A0A1B1IVR9	uncultured_Mediterranean_phage	65.9	5.1e-08
AZO01995.1|437928_438684_-	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	47.1	1.2e-40
AZO07276.1|438680_439481_-	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	32.0	1.4e-31
>prophage 2
CP034445	Mesorhizobium sp. M2A.F.Ca.ET.043.02.1.1 chromosome, complete genome	6700763	3154863	3212569	6700763	transposase,tRNA	Bacillus_virus(33.33%)	58	NA	NA
AZO04215.1|3154863_3156738_-|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	tRNA	NA	NA	NA	NA
AZO04216.1|3156905_3158213_-|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	tRNA	NA	NA	NA	NA
AZO04217.1|3158333_3160349_+	thioredoxin domain-containing protein	NA	NA	NA	NA	NA
AZO04218.1|3160517_3161129_+|transposase	transposase	transposase	E5E3P6	Burkholderia_phage	37.0	7.8e-14
AZO04219.1|3161080_3161524_+|transposase	IS4/IS5 family transposase	transposase	NA	NA	NA	NA
AZO04220.1|3161698_3162964_-	transcription termination factor Rho	NA	NA	NA	NA	NA
AZO04221.1|3163142_3163679_-	protoporphyrinogen oxidase HemJ	NA	NA	NA	NA	NA
AZO04222.1|3163675_3164704_-	uroporphyrinogen decarboxylase	NA	NA	NA	NA	NA
AZO04223.1|3165199_3166021_+	kinase/pyrophosphorylase	NA	NA	NA	NA	NA
AZO04224.1|3166316_3166916_+	Maf-like protein	NA	NA	NA	NA	NA
AZO04225.1|3166908_3167736_+	shikimate dehydrogenase	NA	NA	NA	NA	NA
AZO04226.1|3167735_3168341_+	dephospho-CoA kinase	NA	NA	NA	NA	NA
AZO04227.1|3168415_3169120_+	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	49.6	1.6e-55
AZO04228.1|3169404_3169905_-	protein-export chaperone SecB	NA	NA	NA	NA	NA
AZO04229.1|3170023_3170518_-	membrane protein FxsA	NA	NA	NA	NA	NA
AZO04230.1|3170722_3171430_+	calcium-binding protein	NA	NA	NA	NA	NA
AZO04231.1|3171452_3172556_+	transglycosylase	NA	NA	NA	NA	NA
AZO04232.1|3172552_3173077_+	DNA mismatch repair protein MutS	NA	NA	NA	NA	NA
AZO04233.1|3173130_3173499_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AZO04234.1|3173791_3174040_-	hypothetical protein	NA	NA	NA	NA	NA
AZO04235.1|3174367_3175294_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZO04236.1|3175585_3176203_-	transglutaminase	NA	NA	NA	NA	NA
AZO04237.1|3176404_3177682_-	polyhydroxyalkanoate depolymerase	NA	NA	NA	NA	NA
AZO04238.1|3177965_3178328_-	septal ring lytic transglycosylase RlpA family protein	NA	S5MVR9	Sinorhizobium_phage	61.3	5.8e-25
AZO04239.1|3178637_3178823_+	hypothetical protein	NA	NA	NA	NA	NA
AZO04240.1|3178869_3179673_-	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	35.0	3.1e-26
AZO04241.1|3179680_3180460_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
AZO04242.1|3180456_3181614_-	alkanesulfonate monooxygenase, FMNH(2)-dependent	NA	NA	NA	NA	NA
AZO04243.1|3181687_3182656_-	sulfonate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZO04244.1|3183037_3184234_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZO07436.1|3184277_3184463_-	hypothetical protein	NA	NA	NA	NA	NA
AZO04245.1|3184485_3185346_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
AZO04246.1|3185342_3186116_-	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	38.0	4.0e-31
AZO04247.1|3186279_3187296_-	taurine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZO04248.1|3187751_3188678_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZO04249.1|3189176_3190517_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZO07437.1|3190518_3190749_+	hypothetical protein	NA	NA	NA	NA	NA
AZO04250.1|3190917_3192351_+	pyridoxal-phosphate dependent enzyme	NA	A0A1W6JHY1	Lactococcus_phage	37.9	2.2e-46
AZO04251.1|3192347_3193517_+	cystathionine gamma-synthase	NA	NA	NA	NA	NA
AZO04252.1|3193732_3194455_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZO04253.1|3194583_3195825_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZO04254.1|3195866_3196673_+	Asp/Glu racemase	NA	NA	NA	NA	NA
AZO04255.1|3197243_3197426_+	hypothetical protein	NA	NA	NA	NA	NA
AZO04256.1|3197449_3197755_-	hypothetical protein	NA	NA	NA	NA	NA
AZO04257.1|3197783_3199454_-	cyclic nucleotide-binding domain-containing protein	NA	G3MA85	Bacillus_virus	30.2	3.1e-28
AZO04258.1|3200167_3200788_-	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	NA	NA	NA	NA	NA
AZO04259.1|3200822_3201644_-	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA	NA
AZO04260.1|3201640_3203512_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	29.6	8.7e-48
AZO04261.1|3203642_3204662_-	glucokinase	NA	NA	NA	NA	NA
AZO04262.1|3204750_3205833_-	penicillin-insensitive murein endopeptidase	NA	NA	NA	NA	NA
AZO04263.1|3205915_3206818_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
AZO04264.1|3206814_3207966_-|tRNA	tRNA epoxyqueuosine(34) reductase QueG	tRNA	NA	NA	NA	NA
AZO04265.1|3207946_3208639_-	glutathione S-transferase family protein	NA	NA	NA	NA	NA
AZO04266.1|3208798_3209605_+	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA	NA
AZO04267.1|3209788_3210229_-	YraN family protein	NA	NA	NA	NA	NA
AZO04268.1|3210225_3211146_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	42.7	7.6e-45
AZO04269.1|3211272_3211461_+	hypothetical protein	NA	NA	NA	NA	NA
AZO04270.1|3211642_3212569_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
>prophage 3
CP034445	Mesorhizobium sp. M2A.F.Ca.ET.043.02.1.1 chromosome, complete genome	6700763	3532281	3544784	6700763		Sinorhizobium_phage(33.33%)	17	NA	NA
AZO04551.1|3532281_3533550_-	hypothetical protein	NA	A0A067XRF8	Caulobacter_phage	29.1	1.6e-21
AZO04552.1|3533587_3533794_-	hypothetical protein	NA	NA	NA	NA	NA
AZO07460.1|3533790_3534207_-	hypothetical protein	NA	A0A291AUQ6	Sinorhizobium_phage	44.7	2.2e-20
AZO04553.1|3534257_3534629_-	DUF4031 domain-containing protein	NA	R9TSA1	Rhizobium_phage	62.8	4.9e-19
AZO04554.1|3534625_3535201_-	hypothetical protein	NA	NA	NA	NA	NA
AZO04555.1|3535184_3536216_-	phage Gp37/Gp68 family protein	NA	G8DH75	Emiliania_huxleyi_virus	52.5	2.0e-94
AZO04556.1|3536388_3536631_-	hypothetical protein	NA	NA	NA	NA	NA
AZO04557.1|3536636_3536870_-	hypothetical protein	NA	NA	NA	NA	NA
AZO04558.1|3536997_3537642_-	LexA family transcriptional regulator	NA	NA	NA	NA	NA
AZO04559.1|3537570_3537963_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
AZO04560.1|3537959_3538397_+	hypothetical protein	NA	NA	NA	NA	NA
AZO04561.1|3538527_3539010_+	hypothetical protein	NA	A0A291AUJ7	Sinorhizobium_phage	38.8	5.8e-20
AZO07461.1|3539073_3539631_+	hypothetical protein	NA	K4JN80	Caulobacter_virus	37.8	4.9e-07
AZO04562.1|3539656_3540007_+	hypothetical protein	NA	NA	NA	NA	NA
AZO04563.1|3540052_3540985_+	DUF2303 family protein	NA	A0A291AUR3	Sinorhizobium_phage	45.1	8.4e-68
AZO04564.1|3540984_3542175_+	hypothetical protein	NA	M4MB46	Vibrio_phage	38.2	2.3e-22
AZO04565.1|3542171_3544784_+	DNA methylase N-4	NA	J7I4L6	Pseudomonas_phage	52.6	7.9e-273
>prophage 4
CP034445	Mesorhizobium sp. M2A.F.Ca.ET.043.02.1.1 chromosome, complete genome	6700763	3547902	3566414	6700763	protease,terminase,portal,head,tail,capsid	Brucella_phage(30.77%)	22	NA	NA
AZO04573.1|3547902_3549027_+	helix-turn-helix domain-containing protein	NA	A0A291AUK7	Sinorhizobium_phage	33.4	3.3e-34
AZO07462.1|3549133_3549682_+	transcriptional antiterminator NusG	NA	NA	NA	NA	NA
AZO07463.1|3549828_3550176_+	HNH endonuclease	NA	I3ULZ4	Rhodobacter_phage	50.0	3.5e-11
AZO04574.1|3550243_3550828_+|terminase	phage terminase small subunit P27 family	terminase	NA	NA	NA	NA
AZO04575.1|3550832_3552572_+|terminase	terminase large subunit	terminase	Q6DMU3	Streptococcus_phage	39.9	1.6e-96
AZO04576.1|3552568_3553795_+|portal	phage portal protein	portal	A0A0U2BXP2	Paracoccus_phage	61.0	2.3e-129
AZO04577.1|3553791_3554457_+|head,protease	HK97 family phage prohead protease	head,protease	A0A0U2BX10	Paracoccus_phage	51.1	2.8e-57
AZO07464.1|3554508_3555909_+|capsid	phage major capsid protein	capsid	A0A2H4JD98	uncultured_Caudovirales_phage	61.3	1.2e-131
AZO04578.1|3555969_3556191_+	hypothetical protein	NA	NA	NA	NA	NA
AZO04579.1|3556250_3556613_+	hypothetical protein	NA	NA	NA	NA	NA
AZO04580.1|3556615_3557185_+	hypothetical protein	NA	C7BGH1	Burkholderia_phage	30.9	1.1e-06
AZO04581.1|3557218_3557629_+	hypothetical protein	NA	B4UTP8	Rhizobium_phage	57.9	8.1e-31
AZO04582.1|3557793_3558141_+|head,tail	head-tail adaptor protein	head,tail	A0A141GEW5	Brucella_phage	44.6	5.1e-18
AZO04583.1|3558137_3558638_+	HK97 gp10 family phage protein	NA	NA	NA	NA	NA
AZO04584.1|3558634_3559039_+	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
AZO04585.1|3559122_3559563_+	hypothetical protein	NA	NA	NA	NA	NA
AZO04586.1|3559559_3560006_+	gene transfer agent family protein	NA	NA	NA	NA	NA
AZO04587.1|3560129_3562610_+	hypothetical protein	NA	B4UTQ6	Rhizobium_phage	31.0	2.0e-68
AZO04588.1|3562619_3563288_+	hypothetical protein	NA	A0A141GEX3	Brucella_phage	50.7	9.7e-50
AZO04589.1|3563287_3563884_+	hypothetical protein	NA	A0A141GEX4	Brucella_phage	56.2	5.4e-60
AZO04590.1|3563892_3564300_+	hypothetical protein	NA	NA	NA	NA	NA
AZO07465.1|3564359_3566414_+	fibronectin type III domain-containing protein	NA	A0A141GEY5	Brucella_phage	56.0	5.8e-170
