assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003950255.1_ASM395025v1	CP034369	Pseudomonas aeruginosa strain SP4371 chromosome, complete genome	1	837118-837565	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no		csa3,DEDDh,cas3,WYL,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,PD-DExK,RT	Orphan	GTTCACTGCCGTATAGGCAGCTAAGAAA,GTTCACTGCCGTATAGGCAGCTAAGAAA,GTTCACTGCCGTATAGGCAGCTAAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	7,7,7	7	Orphan	csa3,DEDDh,cas3,WYL,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,PD-DExK,RT	NA|71aa|up_6|CP034369.1_830285_830498_-,NA|105aa|up_0|CP034369.1_836532_836847_+,NA|44aa|down_0|CP034369.1_838155_838287_+,NA|141aa|down_1|CP034369.1_838444_838867_-,NA|59aa|down_5|CP034369.1_842041_842218_-	NA|110aa|up_9|CP034369.1_827254_827584_-	pfam06942, GlpM, GlpM protein	NA|513aa|up_8|CP034369.1_827716_829255_-	PRK12266, glpD, glycerol-3-phosphate dehydrogenase; Reviewed	NA|252aa|up_7|CP034369.1_829533_830289_-	PRK10906, PRK10906, DeoR/GlpR family transcriptional regulator	NA|71aa|up_6|CP034369.1_830285_830498_-	NA	NA|506aa|up_5|CP034369.1_830494_832012_-	PRK00047, glpK, glycerol kinase GlpK	NA|280aa|up_4|CP034369.1_832051_832891_-	cd00333, MIP, Major intrinsic protein (MIP) superfamily	NA|157aa|up_3|CP034369.1_833155_833626_+	cd00002, YbaK_deacylase, This CD includes cysteinyl-tRNA(Pro) deacylases from Haemophilus influenzae and Escherichia coli and other related bacterial proteins	NA|495aa|up_2|CP034369.1_833689_835174_+	cd07786, FGGY_EcGK_like, Escherichia coli glycerol kinase-like proteins; belongs to the FGGY family of carbohydrate kinases	NA|262aa|up_1|CP034369.1_835369_836155_+	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only]	NA|105aa|up_0|CP034369.1_836532_836847_+	NA	NA|44aa|down_0|CP034369.1_838155_838287_+	NA	NA|141aa|down_1|CP034369.1_838444_838867_-	NA	NA|177aa|down_2|CP034369.1_838966_839497_-	COG3038, CybB, Cytochrome B561 [Energy production and conversion]	NA|66aa|down_3|CP034369.1_839679_839877_+	cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones	NA|393aa|down_4|CP034369.1_840855_842034_+	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|59aa|down_5|CP034369.1_842041_842218_-	NA	NA|308aa|down_6|CP034369.1_842344_843268_-	cd06986, cupin_MmsR-like_N, AraC/XylS family transcriptional regulators similar to MmsR, N-terminal cupin domain	NA|498aa|down_7|CP034369.1_843399_844893_+	TIGR01722, Methylmalonate-semialdehyde_dehydrogenase, methylmalonic acid semialdehyde dehydrogenase	NA|299aa|down_8|CP034369.1_844908_845805_+	TIGR01692, 3-hydroxyisobutyrate_dehydrogenase_mitochondrial, 3-hydroxyisobutyrate dehydrogenase	NA|629aa|down_9|CP034369.1_845906_847793_+	cd05967, PrpE, Propionyl-CoA synthetase (PrpE)
GCA_003950255.1_ASM395025v1	CP034369	Pseudomonas aeruginosa strain SP4371 chromosome, complete genome	2	2291568-2292616	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas6f,cas7f,cas5f,cas8f,cas3f,cas1	csa3,DEDDh,cas3,WYL,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,PD-DExK,RT	Type I-F	GTTCACTGCCGTATAGGCAGCTAAGAAA,GTTCACTGCCGTATAGGCAGCTAAGAAAA,GTTCACTGCCGTATAGGCAGCTAAGAAA	28,29,28	2	2	2291776-2291807|2291777-2291807	CP034369.1_3437185-3437154|CP034369.1_3437184-3437154	I-F:I-F:I-F	16,17,17	17	TypeI-F	csa3,DEDDh,cas3,WYL,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,PD-DExK,RT	NA|62aa|up_9|CP034369.1_2268757_2268943_-,NA|82aa|up_5|CP034369.1_2272417_2272663_-,NA|105aa|down_6|CP034369.1_2302147_2302462_-	NA|62aa|up_9|CP034369.1_2268757_2268943_-	NA	NA|725aa|up_8|CP034369.1_2269006_2271181_+	pfam04632, FUSC, Fusaric acid resistance protein family	NA|70aa|up_7|CP034369.1_2271170_2271380_+	pfam07869, DUF1656, Protein of unknown function (DUF1656)	NA|335aa|up_6|CP034369.1_2271376_2272381_+	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms]	NA|82aa|up_5|CP034369.1_2272417_2272663_-	NA	NA|305aa|up_4|CP034369.1_2272924_2273839_+	TIGR03707, PPK2_P_aer, polyphosphate kinase 2, PA0141 family	NA|338aa|up_3|CP034369.1_2274014_2275028_+	pfam13523, Acetyltransf_8, Acetyltransferase (GNAT) domain	NA|188aa|up_2|CP034369.1_2275104_2275668_-	PRK07037, PRK07037, extracytoplasmic-function sigma-70 factor; Validated	NA|255aa|up_1|CP034369.1_2276310_2277075_+	COG3208, GrsT, Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|171aa|up_0|CP034369.1_2290660_2291173_-	COG3617, COG3617, Prophage antirepressor [Transcription]	cas6f|188aa|down_0|CP034369.1_2292738_2293302_-	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f	cas7f|343aa|down_1|CP034369.1_2293305_2294334_-	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas5f|328aa|down_2|CP034369.1_2294344_2295328_-	cd09736, Csy2_I-F, CRISPR/Cas system-associated RAMP superfamily protein Csy2	cas8f|435aa|down_3|CP034369.1_2295314_2296619_-	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1	cas3f|1077aa|down_4|CP034369.1_2296676_2299907_-	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas1|325aa|down_5|CP034369.1_2299903_2300878_-	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	NA|105aa|down_6|CP034369.1_2302147_2302462_-	NA	NA|307aa|down_7|CP034369.1_2303166_2304087_-	COG4313, COG4313, Protein involved in meta-pathway of phenol degradation [Energy production and conversion]	NA|473aa|down_8|CP034369.1_2304120_2305539_-	pfam03573, OprD, outer membrane porin, OprD family	NA|227aa|down_9|CP034369.1_2305620_2306301_-	cd01012, YcaC_related, YcaC related amidohydrolases; E
GCA_003950255.1_ASM395025v1	CP034369	Pseudomonas aeruginosa strain SP4371 chromosome, complete genome	3	2301130-2301877	3,3,3	CRISPRCasFinder,CRT,PILER-CR	no	cas6f,cas7f,cas5f,cas8f,cas3f,cas1	csa3,DEDDh,cas3,WYL,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,PD-DExK,RT	Type I-F	TTTCTTAGCTGCCTACACGGCAGTGAAC,TTTCTTAGCTGCCTACACGGCAGTGAAC,GTTCACTGCCGTGTAGGCAGCTAAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	12,12,10	12	TypeI-F	csa3,DEDDh,cas3,WYL,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,PD-DExK,RT	NA,NA|105aa|down_0|CP034369.1_2302147_2302462_-	NA|338aa|up_9|CP034369.1_2274014_2275028_+	pfam13523, Acetyltransf_8, Acetyltransferase (GNAT) domain	NA|188aa|up_8|CP034369.1_2275104_2275668_-	PRK07037, PRK07037, extracytoplasmic-function sigma-70 factor; Validated	NA|255aa|up_7|CP034369.1_2276310_2277075_+	COG3208, GrsT, Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|171aa|up_6|CP034369.1_2290660_2291173_-	COG3617, COG3617, Prophage antirepressor [Transcription]	cas6f|188aa|up_5|CP034369.1_2292738_2293302_-	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f	cas7f|343aa|up_4|CP034369.1_2293305_2294334_-	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas5f|328aa|up_3|CP034369.1_2294344_2295328_-	cd09736, Csy2_I-F, CRISPR/Cas system-associated RAMP superfamily protein Csy2	cas8f|435aa|up_2|CP034369.1_2295314_2296619_-	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1	cas3f|1077aa|up_1|CP034369.1_2296676_2299907_-	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas1|325aa|up_0|CP034369.1_2299903_2300878_-	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	NA|105aa|down_0|CP034369.1_2302147_2302462_-	NA	NA|307aa|down_1|CP034369.1_2303166_2304087_-	COG4313, COG4313, Protein involved in meta-pathway of phenol degradation [Energy production and conversion]	NA|473aa|down_2|CP034369.1_2304120_2305539_-	pfam03573, OprD, outer membrane porin, OprD family	NA|227aa|down_3|CP034369.1_2305620_2306301_-	cd01012, YcaC_related, YcaC related amidohydrolases; E	NA|287aa|down_4|CP034369.1_2306398_2307259_-	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|313aa|down_5|CP034369.1_2307359_2308298_+	PRK14997, PRK14997, LysR family transcriptional regulator; Provisional	NA|546aa|down_6|CP034369.1_2308301_2309939_-	PRK13272, treA, alpha,alpha-trehalase TreA	NA|142aa|down_7|CP034369.1_2310297_2310723_+	COG4244, COG4244, Predicted membrane protein [Function unknown]	NA|440aa|down_8|CP034369.1_2310715_2312035_+	COG2133, COG2133, Glucose/sorbosone dehydrogenases [Carbohydrate transport and metabolism]	NA|470aa|down_9|CP034369.1_2312213_2313623_+	PRK06938, PRK06938, diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
GCA_003950255.1_ASM395025v1	CP034369	Pseudomonas aeruginosa strain SP4371 chromosome, complete genome	6	6148003-6148146	4	PILER-CR	no		csa3,DEDDh,cas3,WYL,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,PD-DExK,RT	Orphan	GACACCAGGCCGCCGCCGCGGTTGTCCAG	29	0	0	NA	NA	NA	2	2	Orphan	csa3,DEDDh,cas3,WYL,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,PD-DExK,RT	NA|171aa|up_9|CP034369.1_6131088_6131601_-,NA|106aa|up_7|CP034369.1_6132782_6133100_-,NA|110aa|up_1|CP034369.1_6138982_6139312_-,NA	NA|171aa|up_9|CP034369.1_6131088_6131601_-	NA	NA|234aa|up_8|CP034369.1_6131850_6132552_-	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|106aa|up_7|CP034369.1_6132782_6133100_-	NA	NA|1113aa|up_6|CP034369.1_6133096_6136435_-	pfam04830, DUF637, Possible hemagglutinin (DUF637)	NA|72aa|up_5|CP034369.1_6136655_6136871_-	PRK05248, PRK05248, hypothetical protein; Provisional	NA|143aa|up_4|CP034369.1_6137022_6137451_-	pfam14436, EndoU_bacteria, Bacterial EndoU nuclease	NA|231aa|up_3|CP034369.1_6137441_6138134_-	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|81aa|up_2|CP034369.1_6138315_6138558_-	pfam14206, Cys_rich_CPCC, Cysteine-rich CPCC	NA|110aa|up_1|CP034369.1_6138982_6139312_-	NA	NA|202aa|up_0|CP034369.1_6139311_6139917_-	pfam13930, Endonuclea_NS_2, DNA/RNA non-specific endonuclease	NA|563aa|down_0|CP034369.1_6150054_6151743_-	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion]	NA|76aa|down_1|CP034369.1_6152040_6152268_-	pfam06649, DUF1161, Protein of unknown function (DUF1161)	NA|72aa|down_2|CP034369.1_6152451_6152667_-	COG3360, COG3360, Uncharacterized conserved protein [Function unknown]	NA|296aa|down_3|CP034369.1_6152767_6153655_-	cd08482, PBP2_TrpI, The C-terminal substrate binding domain of LysR-type transcriptional regulator TrpI, which is involved in control of tryptophan synthesis, contains type 2 periplasmic binding fold	NA|403aa|down_4|CP034369.1_6153758_6154967_+	PRK04346, PRK04346, tryptophan synthase subunit beta; Validated	NA|269aa|down_5|CP034369.1_6154963_6155770_+	PRK13111, trpA, tryptophan synthase subunit alpha; Provisional	NA|208aa|down_6|CP034369.1_6155955_6156579_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|122aa|down_7|CP034369.1_6156586_6156952_+	COG2198, ArcB, FOG: HPt domain [Signal transduction mechanisms]	NA|126aa|down_8|CP034369.1_6156930_6157308_-	pfam08883, DOPA_dioxygen, Dopa 4,5-dioxygenase family	NA|305aa|down_9|CP034369.1_6157318_6158233_-	TIGR03418, chol_sulf_TF, putative choline sulfate-utilization transcription factor
GCA_003950255.1_ASM395025v1	CP034369	Pseudomonas aeruginosa strain SP4371 chromosome, complete genome	7	6295923-6296081	6	CRISPRCasFinder	no		csa3,DEDDh,cas3,WYL,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,PD-DExK,RT	Orphan	CGCATGCGTTTTTCAATGCGAACGACCGGCCAGGATGGCCGGGCTGGGGG	50	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas3,WYL,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,PD-DExK,RT	NA,NA	NA|261aa|up_9|CP034369.1_6286223_6287006_-	cd13597, PBP2_lipoprotein_Tp32, The substrate-binding domain of the 32-kilodalton lipoprotein (Tp32) from Treponema pallidum binds L-methionine; the type 2 periplasmic-binding protein fold	NA|226aa|up_8|CP034369.1_6287082_6287760_-	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism]	NA|336aa|up_7|CP034369.1_6287759_6288767_-	PRK11153, metN, DL-methionine transporter ATP-binding subunit; Provisional	NA|263aa|up_6|CP034369.1_6288973_6289762_-	TIGR03302, OM_YfiO, outer membrane assembly lipoprotein YfiO	NA|263aa|up_5|CP034369.1_6289803_6290592_-	PRK09543, znuB, zinc ABC transporter permease subunit ZnuB	NA|270aa|up_4|CP034369.1_6290584_6291394_-	PRK09544, znuC, high-affinity zinc transporter ATPase; Reviewed	NA|168aa|up_3|CP034369.1_6291393_6291897_-	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|308aa|up_2|CP034369.1_6291966_6292890_+	COG4531, ZnuA, ABC-type Zn2+ transport system, periplasmic component/surface adhesin [Inorganic ion transport and metabolism]	NA|735aa|up_1|CP034369.1_6292999_6295204_+	TIGR02504, ribonucleotide_reductase, ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent	NA|230aa|up_0|CP034369.1_6295220_6295910_+	COG0209, NrdA, Ribonucleotide reductase, alpha subunit [Nucleotide transport and metabolism]	NA|317aa|down_0|CP034369.1_6296198_6297149_-	PRK05231, PRK05231, homoserine kinase; Provisional	NA|97aa|down_1|CP034369.1_6297182_6297473_-	pfam11191, DUF2782, Protein of unknown function (DUF2782)	NA|914aa|down_2|CP034369.1_6297550_6300292_+	PRK05755, PRK05755, DNA polymerase I; Provisional	NA|216aa|down_3|CP034369.1_6300555_6301203_-	PRK00454, engB, GTP-binding protein YsxC; Reviewed	NA|98aa|down_4|CP034369.1_6301386_6301680_+	COG3245, CycB, Cytochrome c5 [Energy production and conversion]	NA|202aa|down_5|CP034369.1_6301725_6302331_+	COG2863, COG2863, Cytochrome c553 [Energy production and conversion]	NA|212aa|down_6|CP034369.1_6302498_6303134_+	cd03019, DsbA_DsbA, DsbA family, DsbA subfamily; DsbA is a monomeric thiol disulfide oxidoreductase protein containing a redox active CXXC motif imbedded in a TRX fold	NA|293aa|down_7|CP034369.1_6303149_6304028_+	COG3568, ElsH, Metal-dependent hydrolase [General function prediction only]	NA|198aa|down_8|CP034369.1_6306158_6306752_+	PRK10739, PRK10739, YhgN family NAAT transporter	NA|260aa|down_9|CP034369.1_6306781_6307561_+	COG3023, ampD, N-acetyl-anhydromuramyl-L-alanine amidase [Cell envelope biogenesis, outer membrane]
GCA_003950255.1_ASM395025v1	CP034369	Pseudomonas aeruginosa strain SP4371 chromosome, complete genome	8	6587689-6587802	7	CRISPRCasFinder	no		csa3,DEDDh,cas3,WYL,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,PD-DExK,RT	Orphan	GGCCAAAGAACTGGAGGGCAAGGTATGA	28	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas3,WYL,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,PD-DExK,RT	NA,NA|50aa|down_1|CP034369.1_6591249_6591399_-,NA|168aa|down_3|CP034369.1_6592394_6592898_-,NA|251aa|down_6|CP034369.1_6594651_6595404_-,NA|185aa|down_8|CP034369.1_6596172_6596727_-	NA|293aa|up_9|CP034369.1_6574535_6575414_-	TIGR03381, putative_carbon-nitrogen_hydrolase, N-carbamoylputrescine amidase	NA|222aa|up_8|CP034369.1_6575576_6576242_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|354aa|up_7|CP034369.1_6576304_6577366_-	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|459aa|up_6|CP034369.1_6577621_6578998_-	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism]	NA|251aa|up_5|CP034369.1_6579276_6580029_+	pfam07722, Peptidase_C26, Peptidase C26	NA|453aa|up_4|CP034369.1_6580069_6581428_+	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism]	NA|457aa|up_3|CP034369.1_6581493_6582864_+	PRK07480, PRK07480, putative aminotransferase; Validated	NA|368aa|up_2|CP034369.1_6582979_6584083_+	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|366aa|up_1|CP034369.1_6584501_6585599_+	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|385aa|up_0|CP034369.1_6585653_6586808_+	PRK11607, potG, putrescine ABC transporter ATP-binding subunit PotG	NA|796aa|down_0|CP034369.1_6588865_6591253_-	COG2366, COG2366, Protein related to penicillin acylase [General function prediction only]	NA|50aa|down_1|CP034369.1_6591249_6591399_-	NA	NA|351aa|down_2|CP034369.1_6591363_6592416_+	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term	NA|168aa|down_3|CP034369.1_6592394_6592898_-	NA	NA|204aa|down_4|CP034369.1_6593002_6593614_-	cd02969, PRX_like1, Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs	NA|340aa|down_5|CP034369.1_6593612_6594632_+	COG2267, PldB, Lysophospholipase [Lipid metabolism]	NA|251aa|down_6|CP034369.1_6594651_6595404_-	NA	NA|233aa|down_7|CP034369.1_6595452_6596151_+	COG3751, EGL-9, Predicted proline hydroxylase [Posttranslational modification, protein turnover, chaperones]	NA|185aa|down_8|CP034369.1_6596172_6596727_-	NA	NA|165aa|down_9|CP034369.1_6596992_6597487_+	COG1683, COG1683, Uncharacterized conserved protein [Function unknown]
