assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003949975.1_ASM394997v1	CP025272	Xanthomonas vasicola pv. vasculorum strain Xv1601 chromosome, complete genome	2	4335295-4338026	2,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas5,cas8c,cas7,cas4,cas1,cas2	cas3,DEDDh,WYL,DinG,RT,cas5,cas8c,cas7,cas4,cas1,cas2	 Type I-U?,Type I-U,Type I-C	GTCGCGCCCTCACGGGCGCGTGGATTGAAAC,GTCGCGCCCTCACGGGCGCGTGGATTGAAAC,GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	31,31,31	2	2	4335326-4335359|4336110-4336144	CP025272.1_4328747-4328714|CP025272.1_2463727-2463693	I-C:I-C:I-C	40,40,41	41	TypeI-U?,TypeI-U,TypeI-C	cas3,DEDDh,WYL,DinG,RT,cas5,cas8c,cas7,cas4,cas1,cas2	NA,NA	NA|316aa|up_9|CP025272.1_4321264_4322212_-	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional	NA|744aa|up_8|CP025272.1_4322641_4324873_-	pfam03971, IDH, Monomeric isocitrate dehydrogenase	NA|567aa|up_7|CP025272.1_4325076_4326777_+	COG4715, COG4715, Uncharacterized conserved protein [Function unknown]	cas3|765aa|up_6|CP025272.1_4326940_4329235_+	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3	cas5|225aa|up_5|CP025272.1_4329720_4330395_+	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas8c|615aa|up_4|CP025272.1_4330391_4332236_+	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1)	cas7|293aa|up_3|CP025272.1_4332232_4333111_+	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas4|211aa|up_2|CP025272.1_4333130_4333763_+	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas1|345aa|up_1|CP025272.1_4333765_4334800_+	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas2|97aa|up_0|CP025272.1_4334815_4335106_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|347aa|down_0|CP025272.1_4338093_4339134_+	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|267aa|down_1|CP025272.1_4339133_4339934_+	PRK09183, PRK09183, transposase/IS protein; Provisional	NA|185aa|down_2|CP025272.1_4341575_4342130_-	PRK10856, PRK10856, cytoskeleton protein RodZ	NA|98aa|down_3|CP025272.1_4342235_4342529_-	PRK11198, PRK11198, LysM domain/BON superfamily protein; Provisional	NA|272aa|down_4|CP025272.1_4342629_4343445_-	PRK11792, queF, 7-cyano-7-deazaguanine reductase; Provisional	NA|439aa|down_5|CP025272.1_4343603_4344920_-	cd05667, M20_Acy1-like, M20 Peptidase aminoacylase 1 subfamily	NA|415aa|down_6|CP025272.1_4345178_4346423_+	PRK11556, PRK11556, MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit	NA|1083aa|down_7|CP025272.1_4346517_4349766_+	PRK10503, PRK10503, MdtB/MuxB family multidrug efflux RND transporter permease subunit	NA|1043aa|down_8|CP025272.1_4349881_4353010_+	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|110aa|down_9|CP025272.1_4353917_4354247_+	COG3607, COG3607, Predicted lactoylglutathione lyase [General function prediction only]
GCA_003949975.1_ASM394997v1	CP025272	Xanthomonas vasicola pv. vasculorum strain Xv1601 chromosome, complete genome	3	4339972-4341446	2,2,3	CRISPRCasFinder,CRT,PILER-CR	no	cas3,cas5,cas8c,cas7,cas4,cas1,cas2	cas3,DEDDh,WYL,DinG,RT,cas5,cas8c,cas7,cas4,cas1,cas2	 Type I-U?,Type I-U,Type I-C	GTCGCGCCCTCACGGGCGCGTGGATTGAAAC,GTCGCGCCCTCACGGGCGCGTGGATTGAAAC,GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	31,31,31	0	0	NA	NA	I-C:I-C:I-C	22,22,20	22	TypeI-U?,TypeI-U,TypeI-C	cas3,DEDDh,WYL,DinG,RT,cas5,cas8c,cas7,cas4,cas1,cas2	NA,NA|88aa|down_9|CP025272.1_4355678_4355942_+	NA|567aa|up_9|CP025272.1_4325076_4326777_+	COG4715, COG4715, Uncharacterized conserved protein [Function unknown]	cas3|765aa|up_8|CP025272.1_4326940_4329235_+	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3	cas5|225aa|up_7|CP025272.1_4329720_4330395_+	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas8c|615aa|up_6|CP025272.1_4330391_4332236_+	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1)	cas7|293aa|up_5|CP025272.1_4332232_4333111_+	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas4|211aa|up_4|CP025272.1_4333130_4333763_+	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas1|345aa|up_3|CP025272.1_4333765_4334800_+	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas2|97aa|up_2|CP025272.1_4334815_4335106_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|347aa|up_1|CP025272.1_4338093_4339134_+	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|267aa|up_0|CP025272.1_4339133_4339934_+	PRK09183, PRK09183, transposase/IS protein; Provisional	NA|185aa|down_0|CP025272.1_4341575_4342130_-	PRK10856, PRK10856, cytoskeleton protein RodZ	NA|98aa|down_1|CP025272.1_4342235_4342529_-	PRK11198, PRK11198, LysM domain/BON superfamily protein; Provisional	NA|272aa|down_2|CP025272.1_4342629_4343445_-	PRK11792, queF, 7-cyano-7-deazaguanine reductase; Provisional	NA|439aa|down_3|CP025272.1_4343603_4344920_-	cd05667, M20_Acy1-like, M20 Peptidase aminoacylase 1 subfamily	NA|415aa|down_4|CP025272.1_4345178_4346423_+	PRK11556, PRK11556, MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit	NA|1083aa|down_5|CP025272.1_4346517_4349766_+	PRK10503, PRK10503, MdtB/MuxB family multidrug efflux RND transporter permease subunit	NA|1043aa|down_6|CP025272.1_4349881_4353010_+	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|110aa|down_7|CP025272.1_4353917_4354247_+	COG3607, COG3607, Predicted lactoylglutathione lyase [General function prediction only]	NA|456aa|down_8|CP025272.1_4354293_4355661_-	cd16348, VOC_YdcJ_like, uncharacterized metal-dependent enzyme similar to Shigella flexneri YdcJ	NA|88aa|down_9|CP025272.1_4355678_4355942_+	NA
GCA_003949975.1_ASM394997v1	CP025272	Xanthomonas vasicola pv. vasculorum strain Xv1601 chromosome, complete genome	4	4860437-4860542	3	CRISPRCasFinder	no		cas3,DEDDh,WYL,DinG,RT,cas5,cas8c,cas7,cas4,cas1,cas2	Orphan	GGGCACCTTCTCCCGATGGGAGAAGG	26	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,WYL,DinG,RT,cas5,cas8c,cas7,cas4,cas1,cas2	NA,NA|69aa|down_1|CP025272.1_4862938_4863145_-	NA|185aa|up_9|CP025272.1_4839099_4839654_-	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|659aa|up_8|CP025272.1_4839742_4841719_-	TIGR01074, ATP-dependent_DNA_helicase_Rep, ATP-dependent DNA helicase Rep	NA|210aa|up_7|CP025272.1_4841927_4842557_+	PRK04296, PRK04296, thymidine kinase; Provisional	NA|415aa|up_6|CP025272.1_4843017_4844262_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|534aa|up_5|CP025272.1_4844428_4846030_-	PRK13273, mdoD, glucan biosynthesis protein D; Provisional	NA|368aa|up_4|CP025272.1_4846098_4847202_-	pfam14315, DUF4380, Domain of unknown function (DUF4380)	NA|272aa|up_3|CP025272.1_4847747_4848563_-	PRK01103, PRK01103, bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA|626aa|up_2|CP025272.1_4856384_4858262_-	COG4251, COG4251, Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms]	NA|198aa|up_1|CP025272.1_4858285_4858879_-	cd19166, HemeO-bac, heme oxygenase found in pathogenic bacteria	NA|422aa|up_0|CP025272.1_4858978_4860244_-	cd17388, MFS_TetA, Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily of transporters	NA|721aa|down_0|CP025272.1_4860599_4862762_-	TIGR02283, Membrane-bound_lytic_murein_transglycosylase_B, lytic murein transglycosylase	NA|69aa|down_1|CP025272.1_4862938_4863145_-	NA	NA|130aa|down_2|CP025272.1_4863363_4863753_-	PRK04233, PRK04233, hypothetical protein; Provisional	NA|274aa|down_3|CP025272.1_4864105_4864927_+	PRK10621, PRK10621, hypothetical protein; Provisional	NA|1339aa|down_4|CP025272.1_4865002_4869019_-	COG4913, COG4913, Uncharacterized protein conserved in bacteria [Function unknown]	NA|235aa|down_5|CP025272.1_4869293_4869998_-	pfam13835, DUF4194, Domain of unknown function (DUF4194)	NA|490aa|down_6|CP025272.1_4869984_4871454_-	pfam11855, DUF3375, Protein of unknown function (DUF3375)	NA|210aa|down_7|CP025272.1_4871473_4872103_-	PRK09347, folE, GTP cyclohydrolase I; Provisional	NA|151aa|down_8|CP025272.1_4872204_4872657_+	PRK03573, PRK03573, transcriptional regulator SlyA; Provisional	NA|73aa|down_9|CP025272.1_4872746_4872965_+	pfam07869, DUF1656, Protein of unknown function (DUF1656)
