The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP034148	Pantoea agglomerans strain L15 chromosome, complete genome	4029228	872450	881821	4029228		Streptococcus_phage(25.0%)	10	NA	NA
AZI50062.1|872450_873563_-	porin	NA	Q1MVN1	Enterobacteria_phage	56.2	3.3e-111
AZI50063.1|873801_874905_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	42.4	1.7e-59
AZI50064.1|874915_876169_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	44.6	3.0e-92
AZI50065.1|876529_877261_+	chromophore lyase	NA	A0A2I6PIE7	Escherichia_phage	37.1	1.1e-46
AZI50066.1|877684_877963_+	hypothetical protein	NA	NA	NA	NA	NA
AZI50067.1|878167_878635_+	lysozyme	NA	H9C148	Vibrio_phage	44.0	6.8e-26
AZI50068.1|878631_878979_+	hypothetical protein	NA	A0A286N2Q7	Klebsiella_phage	45.6	4.1e-20
AZI50069.1|878975_879269_+	hypothetical protein	NA	NA	NA	NA	NA
AZI50070.1|879472_881227_+	amylovoran biosynthesis protein AmsF	NA	A0A1S6L3G8	Erwinia_phage	46.2	1.7e-154
AZI50071.1|881608_881821_+	cold-shock protein	NA	A0A1W6JNX5	Morganella_phage	71.4	9.3e-23
>prophage 2
CP034148	Pantoea agglomerans strain L15 chromosome, complete genome	4029228	1759264	1769487	4029228	tRNA	Tupanvirus(14.29%)	12	NA	NA
AZI50870.1|1759264_1761193_+|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	36.9	3.7e-126
AZI50871.1|1761196_1761748_+	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	32.4	6.4e-15
AZI50872.1|1761847_1762045_+	50S ribosomal protein L35	NA	NA	NA	NA	NA
AZI50873.1|1762087_1762444_+	50S ribosomal protein L20	NA	NA	NA	NA	NA
AZI52899.1|1762566_1762611_+	pheST operon leader peptide PheM	NA	NA	NA	NA	NA
AZI50874.1|1762758_1763742_+|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	37.6	2.2e-34
AZI50875.1|1763756_1766144_+|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	A0A1L3IZU3	BeAn_58058_virus	32.0	4.1e-10
AZI50876.1|1766148_1766451_+	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	40.0	7.3e-13
AZI50877.1|1766630_1767614_+	vitamin B12 ABC transporter permease BtuC	NA	NA	NA	NA	NA
AZI50878.1|1767664_1768210_+	glutathione peroxidase	NA	A0A1S7DM81	Molluscum_contagiosum_virus	37.4	3.5e-13
AZI50879.1|1768210_1768960_+	vitamin B12 ABC transporter ATP-binding protein BtuD	NA	NA	NA	NA	NA
AZI50880.1|1769028_1769487_+	endopeptidase	NA	A0A217EQL1	Bacillus_phage	37.5	5.5e-12
>prophage 3
CP034148	Pantoea agglomerans strain L15 chromosome, complete genome	4029228	3041386	3084097	4029228	head,terminase,tail	uncultured_Caudovirales_phage(38.64%)	60	NA	NA
AZI51966.1|3041386_3041869_+	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	46.8	5.7e-28
AZI51967.1|3042447_3043512_+	acyltransferase	NA	A0A2H4IYS5	uncultured_Caudovirales_phage	76.8	4.2e-140
AZI51968.1|3043553_3043736_-	hypothetical protein	NA	A0A2H4J1C2	uncultured_Caudovirales_phage	79.7	5.7e-21
AZI51969.1|3043732_3044596_-	hypothetical protein	NA	A0A2H4J9P7	uncultured_Caudovirales_phage	90.6	1.1e-56
AZI51970.1|3044595_3045276_-	DUF2612 domain-containing protein	NA	A0A2H4J1A9	uncultured_Caudovirales_phage	81.9	7.9e-108
AZI51971.1|3045272_3046472_-	hypothetical protein	NA	A0A2H4J5T1	uncultured_Caudovirales_phage	74.1	7.8e-159
AZI51972.1|3046471_3046825_-	hypothetical protein	NA	A0A2H4J629	uncultured_Caudovirales_phage	84.6	1.4e-52
AZI51973.1|3046824_3047577_-	translation initiation factor IF-2	NA	A0A2H4J8H6	uncultured_Caudovirales_phage	78.8	5.3e-113
AZI51974.1|3047666_3048167_-	type II toxin-antitoxin system death-on-curing family toxin	NA	NA	NA	NA	NA
AZI51975.1|3048171_3048351_-	hypothetical protein	NA	NA	NA	NA	NA
AZI52951.1|3048652_3048931_-	hypothetical protein	NA	A0A2H4J1A5	uncultured_Caudovirales_phage	59.3	6.7e-29
AZI51976.1|3048999_3050028_-	hypothetical protein	NA	A0A2H4J1B2	uncultured_Caudovirales_phage	53.8	9.2e-100
AZI51977.1|3050030_3050333_-	hypothetical protein	NA	A0A0M4R5B7	Salmonella_phage	57.0	5.7e-26
AZI51978.1|3050329_3050947_-	hypothetical protein	NA	A0A2H4J1B3	uncultured_Caudovirales_phage	62.1	1.2e-54
AZI51979.1|3050946_3053151_-	lytic transglycosylase domain-containing protein	NA	A0A2H4J9N7	uncultured_Caudovirales_phage	68.3	2.4e-278
AZI51980.1|3053140_3053299_-	lytic transglycosylase	NA	NA	NA	NA	NA
AZI51981.1|3053328_3053760_-	hypothetical protein	NA	A0A2H4J2V6	uncultured_Caudovirales_phage	69.7	4.6e-45
AZI51982.1|3053763_3054207_-	DUF3277 family protein	NA	A0A2H4J619	uncultured_Caudovirales_phage	83.9	5.4e-65
AZI51983.1|3054219_3055365_-	DUF3383 domain-containing protein	NA	A0A2H4J8G4	uncultured_Caudovirales_phage	71.1	2.2e-150
AZI51984.1|3055368_3055917_-	hypothetical protein	NA	A0A0M4R331	Salmonella_phage	54.4	4.1e-54
AZI51985.1|3055909_3056296_-|head,tail	head-tail adaptor	head,tail	A0A0M3ULK0	Salmonella_phage	78.1	6.0e-52
AZI51986.1|3056282_3056912_-	hypothetical protein	NA	A0A2H4J488	uncultured_Caudovirales_phage	40.1	2.4e-26
AZI51987.1|3056908_3057316_-	DUF4054 domain-containing protein	NA	A0A0M5M3S2	Salmonella_phage	67.2	2.4e-43
AZI51988.1|3057299_3057647_-	hypothetical protein	NA	NA	NA	NA	NA
AZI51989.1|3057687_3058626_-	DUF2184 domain-containing protein	NA	A0A2H4J191	uncultured_Caudovirales_phage	56.1	6.0e-98
AZI51990.1|3058640_3059138_-	hypothetical protein	NA	A0A2H4JHM9	uncultured_Caudovirales_phage	42.1	1.6e-25
AZI51991.1|3059137_3060379_-	DUF2213 domain-containing protein	NA	A0A0M4R5A6	Salmonella_phage	45.0	4.2e-91
AZI51992.1|3060444_3060633_-	hypothetical protein	NA	NA	NA	NA	NA
AZI52952.1|3060664_3061267_-|head	phage head morphogenesis protein	head	A0A0M4REK0	Salmonella_phage	67.9	4.3e-73
AZI51993.1|3061280_3062759_-	DUF1073 domain-containing protein	NA	A0A0M4S6U1	Salmonella_phage	60.9	5.3e-173
AZI51994.1|3062748_3064380_-	TerL protein	NA	A9YWZ6	Burkholderia_phage	73.4	4.1e-235
AZI51995.1|3064440_3064779_+	hypothetical protein	NA	NA	NA	NA	NA
AZI51996.1|3064991_3065957_-|terminase	terminase small subunit	terminase	A0A0U2RXW9	Escherichia_phage	38.1	3.2e-30
AZI51997.1|3066008_3066332_-	negative regulator GrlR	NA	NA	NA	NA	NA
AZI51998.1|3066683_3066959_-	hypothetical protein	NA	NA	NA	NA	NA
AZI52953.1|3066962_3067217_-	peptidase	NA	B6SD44	Bacteriophage	61.0	2.4e-17
AZI51999.1|3067104_3067506_-	hypothetical protein	NA	S5FKR3	Shigella_phage	31.5	2.9e-09
AZI52000.1|3067502_3068042_-	lysozyme	NA	H9C184	Pectobacterium_phage	76.7	2.6e-77
AZI52001.1|3068044_3068407_-	hypothetical protein	NA	NA	NA	NA	NA
AZI52002.1|3068902_3069751_-	antitermination protein	NA	M9NZB0	Enterobacteria_phage	51.1	1.0e-67
AZI52003.1|3069789_3070149_-	RusA family crossover junction endodeoxyribonuclease	NA	K7P6W0	Enterobacteria_phage	65.5	1.2e-41
AZI52004.1|3070145_3071528_-	replicative DNA helicase	NA	A0A0P0ZC27	Stx2-converting_phage	58.0	3.2e-132
AZI52005.1|3071524_3072574_-	replication protein	NA	M1FN81	Enterobacteria_phage	63.3	2.1e-51
AZI52006.1|3072566_3072785_-	hypothetical protein	NA	NA	NA	NA	NA
AZI52007.1|3072777_3072963_-	DUF4222 domain-containing protein	NA	NA	NA	NA	NA
AZI52008.1|3072955_3073258_-	hypothetical protein	NA	NA	NA	NA	NA
AZI52009.1|3073285_3073516_-	Cro/Cl family transcriptional regulator	NA	K7PHA1	Enterobacteria_phage	81.6	8.5e-30
AZI52010.1|3073613_3074300_+	LexA family transcriptional repressor	NA	A0A0M4QWY1	Salmonella_phage	48.3	4.5e-50
AZI52011.1|3074898_3075303_+	hypothetical protein	NA	NA	NA	NA	NA
AZI52012.1|3075424_3075637_+	hypothetical protein	NA	NA	NA	NA	NA
AZI52013.1|3075605_3076274_+	exodeoxyribonuclease X	NA	A0A1W5PTR6	Pseudoalteromonas_phage	31.2	4.7e-20
AZI52014.1|3076275_3076941_+	ATP-binding protein	NA	G9L667	Escherichia_phage	60.4	1.9e-69
AZI52015.1|3076940_3077633_+	hypothetical protein	NA	A0A088C400	Shewanella_sp._phage	39.5	3.8e-25
AZI52016.1|3077705_3078239_+	HD family hydrolase	NA	A0A2D1GNL9	Pseudomonas_phage	63.7	5.2e-54
AZI52017.1|3078238_3078688_+	hypothetical protein	NA	NA	NA	NA	NA
AZI52018.1|3078681_3078927_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AZI52019.1|3079543_3080875_+	phage N-6-adenine-methyltransferase	NA	A5LH72	Enterobacteria_phage	68.2	1.8e-84
AZI52020.1|3080871_3082734_+	DNA cytosine methyltransferase	NA	H9C171	Pectobacterium_phage	56.9	1.8e-218
AZI52021.1|3082730_3082937_+	excisionase	NA	I6PBM8	Cronobacter_phage	71.0	6.4e-21
AZI52022.1|3082894_3084097_+	DUF3596 domain-containing protein	NA	I6PDJ1	Cronobacter_phage	66.5	3.5e-151
>prophage 1
CP034149	Pantoea agglomerans strain L15 plasmid pPagL15_1, complete sequence	583567	467382	480533	583567	terminase,holin,tail	Enterobacteria_phage(20.0%)	17	NA	NA
AZI53392.1|467382_468462_+	acyltransferase	NA	A0A2H4JA46	uncultured_Caudovirales_phage	34.3	1.7e-27
AZI53393.1|468505_468940_-|tail	phage tail protein	tail	Q8W612	Enterobacteria_phage	40.3	5.9e-08
AZI53394.1|468944_470276_-	hypothetical protein	NA	Q7Y5S2	Haemophilus_phage	45.6	4.8e-16
AZI53395.1|470280_470856_-	DUF2612 domain-containing protein	NA	D0UIH4	Aggregatibacter_phage	37.9	5.6e-30
AZI53396.1|472180_473488_-|terminase	terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	59.6	9.1e-153
AZI53397.1|473465_474473_-|terminase	terminase small subunit	terminase	Q5QF76	Pseudomonas_virus	44.0	1.4e-36
AZI53398.1|474628_475075_+	arginine repressor	NA	NA	NA	NA	NA
AZI53399.1|475408_476026_-	hypothetical protein	NA	H2BDB7	Pseudomonas_virus	46.4	6.4e-48
AZI53531.1|476009_476840_-	hypothetical protein	NA	B5WZS7	Pseudomonas_phage	45.4	2.1e-62
AZI53400.1|476869_477406_-	hypothetical protein	NA	B5WZS6	Pseudomonas_phage	43.3	2.2e-36
AZI53532.1|477443_477638_-	hypothetical protein	NA	Q76H62	Enterobacteria_phage	57.6	5.0e-07
AZI53401.1|477887_478307_-	structural protein	NA	A0A0E3GMJ2	Enterobacteria_phage	55.4	6.7e-41
AZI53402.1|478293_478584_-|holin	phage holin family protein	holin	A0A0F6TJP7	Escherichia_coli_O157_typing_phage	42.4	5.0e-11
AZI53403.1|478583_478952_-	hypothetical protein	NA	A0A1S5NRL1	Burkholderia_phage	41.4	3.2e-10
AZI53404.1|479175_479481_+	hypothetical protein	NA	NA	NA	NA	NA
AZI53405.1|479891_480074_+	addiction module toxin, HicA family	NA	A0A0D4DC32	Acinetobacter_phage	55.9	3.7e-12
AZI53406.1|480119_480533_+	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0D4DCG1	Acinetobacter_phage	39.7	4.9e-20
>prophage 2
CP034149	Pantoea agglomerans strain L15 plasmid pPagL15_1, complete sequence	583567	483942	490353	583567		Escherichia_phage(50.0%)	11	NA	NA
AZI53409.1|483942_484986_-	DNA cytosine methyltransferase	NA	A0A0R6PG08	Moraxella_phage	38.3	5.6e-52
AZI53410.1|485218_485776_-	DUF1133 family protein	NA	A0A0U2S606	Escherichia_phage	59.8	8.0e-58
AZI53533.1|485772_486066_-	hypothetical protein	NA	Q6V7S4	Burkholderia_virus	52.7	7.8e-20
AZI53411.1|486062_486443_-	hypothetical protein	NA	NA	NA	NA	NA
AZI53534.1|486439_487033_-	DUF1367 family protein	NA	H9C173	Pectobacterium_phage	46.2	2.0e-46
AZI53412.1|487072_487288_-	hypothetical protein	NA	NA	NA	NA	NA
AZI53413.1|487620_487938_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AZI53414.1|487992_488457_-	hypothetical protein	NA	NA	NA	NA	NA
AZI53415.1|488473_488887_-	hypothetical protein	NA	NA	NA	NA	NA
AZI53416.1|488846_489425_-	replication protein	NA	A0A0U2JGJ0	Escherichia_phage	54.0	2.2e-42
AZI53417.1|489312_490353_-	DNA-binding protein	NA	Q286X4	Escherichia_phage	30.4	4.9e-16
>prophage 1
CP034151	Pantoea agglomerans strain L15 plasmid pPagL15_3, complete sequence	66484	0	5549	66484		Enterobacteria_phage(66.67%)	3	NA	NA
AZI53687.1|1358_2345_-	ParB/RepB/Spo0J family partition protein	NA	Q1MVJ4	Enterobacteria_phage	56.6	9.2e-89
AZI53688.1|2341_3550_-	ParA family protein	NA	Q1MVJ3	Enterobacteria_phage	75.2	5.1e-174
AZI53689.1|4682_5549_-	RepB family plasmid replication initiator protein	NA	Q71TL8	Escherichia_phage	73.0	2.2e-118
>prophage 2
CP034151	Pantoea agglomerans strain L15 plasmid pPagL15_3, complete sequence	66484	19100	29108	66484	integrase	Vibrio_phage(25.0%)	14	15682:15697	45633:45648
15682:15697	attL	AACAGGCTGAACTGCG	NA	NA	NA	NA
AZI53699.1|19100_19895_+|integrase	phage integrase family protein	integrase	I3WFA4	Macacine_betaherpesvirus	84.8	1.4e-47
AZI53700.1|20213_20837_+	chromosome partitioning protein ParA	NA	D4HTX7	Vibrio_phage	39.8	7.2e-31
AZI53701.1|20833_21037_+	hypothetical protein	NA	NA	NA	NA	NA
AZI53731.1|21132_21363_+	hypothetical protein	NA	NA	NA	NA	NA
AZI53702.1|21504_21819_-	plasmid maintenance protein CcdB	NA	NA	NA	NA	NA
AZI53703.1|21821_22058_-	antitoxin	NA	NA	NA	NA	NA
AZI53704.1|22477_23752_-	translesion error-prone DNA polymerase V subunit UmuC	NA	F1C5A5	Cronobacter_phage	60.2	6.8e-145
AZI53705.1|23760_24210_-	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	50.8	6.5e-26
AZI53706.1|24498_25026_+	hypothetical protein	NA	A0A1B0VCD0	Salmonella_phage	42.9	5.7e-37
AZI53707.1|25065_25824_-	glycosyltransferase family 25 protein	NA	A0A1V0S9H0	Catovirus	27.2	5.2e-07
AZI53708.1|26160_26871_+	protein mom	NA	A0A0C4UQZ7	Shigella_phage	81.0	4.9e-108
AZI53709.1|27194_27383_+	hypothetical protein	NA	NA	NA	NA	NA
AZI53710.1|28308_28629_+	hypothetical protein	NA	NA	NA	NA	NA
AZI53711.1|28667_29108_+	lysozyme	NA	A0A2I7S753	Vibrio_phage	60.7	6.0e-40
45633:45648	attR	AACAGGCTGAACTGCG	NA	NA	NA	NA
>prophage 3
CP034151	Pantoea agglomerans strain L15 plasmid pPagL15_3, complete sequence	66484	45262	50701	66484		Dickeya_phage(33.33%)	4	NA	NA
AZI53714.1|45262_46450_+	efflux RND transporter periplasmic adaptor subunit	NA	A0A140XAI1	Dickeya_phage	47.1	2.9e-12
AZI53715.1|46446_48387_+	MacB family efflux pump subunit	NA	G9BWD6	Planktothrix_phage	38.6	3.9e-35
AZI53716.1|48390_49761_+	TolC family protein	NA	NA	NA	NA	NA
AZI53717.1|49894_50701_-	glycosyltransferase family 25 protein	NA	M1PWA6	Moumouvirus	29.4	8.2e-11
