assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003856715.1_ASM385671v1	CP024170	Microbacterium sp. Y-01 chromosome, complete genome	2	784603-784715	2	CRISPRCasFinder	no		WYL,csa3,cas3,DEDDh	Orphan	CCCTTCGACAGGCTCAGGGACCCAGGGG	28	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,DEDDh	NA|111aa|up_7|CP024170.1_777528_777861_-,NA|66aa|down_0|CP024170.1_784765_784963_-	NA|487aa|up_9|CP024170.1_775240_776701_+	cd17504, MFS_MMR_MDR_like, Methylenomycin A resistance protein (also called MMR peptide)-like multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|275aa|up_8|CP024170.1_776704_777529_-	pfam08840, BAAT_C, BAAT / Acyl-CoA thioester hydrolase C terminal	NA|111aa|up_7|CP024170.1_777528_777861_-	NA	NA|390aa|up_6|CP024170.1_778008_779178_-	pfam01139, RtcB, tRNA-splicing ligase RtcB	NA|135aa|up_5|CP024170.1_779451_779856_-	cd07262, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|256aa|up_4|CP024170.1_779887_780655_-	cd06193, siderophore_interacting, Siderophore interacting proteins share the domain structure of the ferredoxin reductase like family	NA|332aa|up_3|CP024170.1_780757_781753_+	COG4607, CeuA, ABC-type enterochelin transport system, periplasmic component [Inorganic ion transport and metabolism]	NA|329aa|up_2|CP024170.1_781802_782789_+	COG4606, CeuB, ABC-type enterochelin transport system, permease component [Inorganic ion transport and metabolism]	NA|344aa|up_1|CP024170.1_782793_783825_+	COG4605, CeuC, ABC-type enterochelin transport system, permease component [Inorganic ion transport and metabolism]	NA|252aa|up_0|CP024170.1_783821_784577_+	COG4604, CeuD, ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]	NA|66aa|down_0|CP024170.1_784765_784963_-	NA	NA|320aa|down_1|CP024170.1_784985_785945_-	COG0122, AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase [DNA replication, recombination, and repair]	NA|233aa|down_2|CP024170.1_785995_786694_-	cd00383, trans_reg_C, DNA-binding effector domain of two-component system response regulators	NA|103aa|down_3|CP024170.1_787027_787336_+	pfam14542, Acetyltransf_CG, GCN5-related N-acetyl-transferase	NA|161aa|down_4|CP024170.1_787387_787870_+	cd12208, septicolysin_like, putative septicolysin, cholesterol-dependent cytolysin family and related proteins	NA|390aa|down_5|CP024170.1_788124_789294_+	COG0420, SbcD, DNA repair exonuclease [DNA replication, recombination, and repair]	NA|999aa|down_6|CP024170.1_789294_792291_+	COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair]	NA|186aa|down_7|CP024170.1_792315_792873_-	PRK05634, PRK05634, nucleosidase; Provisional	NA|273aa|down_8|CP024170.1_792983_793802_+	PRK00768, nadE, ammonia-dependent NAD(+) synthetase	NA|1178aa|down_9|CP024170.1_793888_797422_+	COG2251, COG2251, Predicted nuclease (RecB family) [General function prediction only]
GCA_003856715.1_ASM385671v1	CP024170	Microbacterium sp. Y-01 chromosome, complete genome	3	939879-939971	3	CRISPRCasFinder	no		WYL,csa3,cas3,DEDDh	Orphan	CCCTTCGACAAGCTCAGGGACCC	23	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,DEDDh	NA|159aa|up_6|CP024170.1_932759_933236_+,NA|374aa|up_5|CP024170.1_933239_934361_+,NA	NA|206aa|up_9|CP024170.1_930596_931214_+	TIGR03725, T6A_YeaZ, tRNA threonylcarbamoyl adenosine modification protein YeaZ	NA|163aa|up_8|CP024170.1_931210_931699_+	TIGR01575, rimI, ribosomal-protein-alanine acetyltransferase	NA|356aa|up_7|CP024170.1_931695_932763_+	PRK09604, PRK09604, tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	NA|159aa|up_6|CP024170.1_932759_933236_+	NA	NA|374aa|up_5|CP024170.1_933239_934361_+	NA	NA|379aa|up_4|CP024170.1_934344_935481_+	PHA03307, PHA03307, transcriptional regulator ICP4; Provisional	NA|402aa|up_3|CP024170.1_935640_936846_-	pfam18096, Thump_like, THUMP domain-like	NA|99aa|up_2|CP024170.1_937004_937301_+	PRK00364, groES, co-chaperonin GroES; Reviewed	NA|310aa|up_1|CP024170.1_937484_938414_+	COG2962, RarD, Predicted permeases [General function prediction only]	NA|423aa|up_0|CP024170.1_938558_939827_+	cd06346, PBP1_ABC_ligand_binding-like, type 1 periplasmic ligand-binding domain of uncharacterized ABC (Atpase Binding Cassette)-type active transport systems predicted to be involved in uptake of amino acids, peptides, or inorganic ions	NA|254aa|down_0|CP024170.1_940004_940766_-	cd03224, ABC_TM1139_LivF_branched, ATP-binding cassette domain of branched-chain amino acid transporter	NA|322aa|down_1|CP024170.1_940762_941728_-	cd03219, ABC_Mj1267_LivG_branched, ATP-binding cassette component of branched chain amino acids transport system	NA|326aa|down_2|CP024170.1_941774_942752_-	cd06581, TM_PBP1_LivM_like, Transmembrane subunit (TM) of Escherichia coli LivM and related proteins	NA|383aa|down_3|CP024170.1_942754_943903_-	cd06582, TM_PBP1_LivH_like, Transmembrane subunit (TM) of Escherichia coli LivH and related proteins	NA|501aa|down_4|CP024170.1_944371_945874_+	pfam00478, IMPDH, IMP dehydrogenase / GMP reductase domain	NA|154aa|down_5|CP024170.1_945943_946405_-	PRK14950, PRK14950, DNA polymerase III subunits gamma and tau; Provisional	NA|105aa|down_6|CP024170.1_946557_946872_+	pfam10041, DUF2277, Uncharacterized conserved protein (DUF2277)	NA|348aa|down_7|CP024170.1_947016_948060_+	pfam00072, Response_reg, Response regulator receiver domain	NA|330aa|down_8|CP024170.1_948059_949049_+	PRK12767, PRK12767, carbamoyl phosphate synthase-like protein; Provisional	NA|239aa|down_9|CP024170.1_949045_949762_+	COG1387, HIS2, Histidinol phosphatase and related hydrolases of the PHP family [Amino acid transport and metabolism / General function prediction only]
GCA_003856715.1_ASM385671v1	CP024170	Microbacterium sp. Y-01 chromosome, complete genome	4	2372113-2372244	4	CRISPRCasFinder	no		WYL,csa3,cas3,DEDDh	Orphan	ACCCCCAGTCAGGTGCGCTACCAAGCTGCGCCACAGCCCGT	41	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,DEDDh	NA|264aa|up_7|CP024170.1_2364640_2365432_+,NA|147aa|up_6|CP024170.1_2365500_2365941_+,NA|171aa|up_4|CP024170.1_2367493_2368006_+,NA|196aa|up_2|CP024170.1_2369860_2370448_+,NA|180aa|down_2|CP024170.1_2375446_2375986_-,NA|101aa|down_5|CP024170.1_2380458_2380761_-	NA|451aa|up_9|CP024170.1_2361764_2363117_+	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|489aa|up_8|CP024170.1_2363123_2364590_+	TIGR03923, T7SS_EccE, type VII secretion protein EccE	NA|264aa|up_7|CP024170.1_2364640_2365432_+	NA	NA|147aa|up_6|CP024170.1_2365500_2365941_+	NA	NA|501aa|up_5|CP024170.1_2365937_2367440_+	TIGR00929, CAG_pathogenicity_island_protein_23, type IV secretion/conjugal transfer ATPase, VirB4 family	NA|171aa|up_4|CP024170.1_2367493_2368006_+	NA	NA|574aa|up_3|CP024170.1_2368059_2369781_+	pfam12696, TraG-D_C, TraM recognition site of TraD and TraG	NA|196aa|up_2|CP024170.1_2369860_2370448_+	NA	NA|71aa|up_1|CP024170.1_2370444_2370657_+	pfam12728, HTH_17, Helix-turn-helix domain	NA|410aa|up_0|CP024170.1_2370640_2371870_+	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|139aa|down_0|CP024170.1_2372493_2372910_-	smart00910, HIRAN, The HIRAN protein (HIP116, Rad5p N-terminal) is found in the N-terminal regions of the SWI2/SNF2 proteins typified by HIP116 and Rad5p	NA|367aa|down_1|CP024170.1_2374312_2375413_-	cd03506, Delta6-FADS-like, The Delta6 Fatty Acid Desaturase (Delta6-FADS)-like CD includes the integral-membrane enzymes: delta-4, delta-5, delta-6, delta-8, delta-8-sphingolipid, and delta-11 desaturases found in vertebrates, higher plants, fungi, and bacteria	NA|180aa|down_2|CP024170.1_2375446_2375986_-	NA	NA|413aa|down_3|CP024170.1_2377166_2378404_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|360aa|down_4|CP024170.1_2379186_2380266_-	TIGR01377, Monomeric_sarcosine_oxidase, sarcosine oxidase, monomeric form	NA|101aa|down_5|CP024170.1_2380458_2380761_-	NA	NA|190aa|down_6|CP024170.1_2380757_2381327_-	cd03134, GATase1_PfpI_like, A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus	NA|389aa|down_7|CP024170.1_2381328_2382495_-	cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)	NA|889aa|down_8|CP024170.1_2383996_2386663_-	COG0178, UvrA, Excinuclease ATPase subunit [DNA replication, recombination, and repair]	NA|279aa|down_9|CP024170.1_2388218_2389055_-	pfam01026, TatD_DNase, TatD related DNase
GCA_003856715.1_ASM385671v1	CP024170	Microbacterium sp. Y-01 chromosome, complete genome	5	2471612-2471739	5	CRISPRCasFinder	no	csa3	WYL,csa3,cas3,DEDDh	Type I-A	TGACCCCCAGTCAGGTGCGCTACCAAGCTGCGCCACA	37	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,DEDDh	NA|103aa|up_6|CP024170.1_2465957_2466266_+,NA|186aa|up_5|CP024170.1_2466506_2467064_+,NA|190aa|up_2|CP024170.1_2469378_2469948_+,NA|152aa|down_1|CP024170.1_2472450_2472906_+	NA|332aa|up_9|CP024170.1_2463883_2464879_-	COG0798, ACR3, Arsenite efflux pump ACR3 and related permeases [Inorganic ion transport and metabolism]	csa3|120aa|up_8|CP024170.1_2464933_2465293_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|223aa|up_7|CP024170.1_2465292_2465961_+	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]	NA|103aa|up_6|CP024170.1_2465957_2466266_+	NA	NA|186aa|up_5|CP024170.1_2466506_2467064_+	NA	NA|599aa|up_4|CP024170.1_2467060_2468857_+	pfam12696, TraG-D_C, TraM recognition site of TraD and TraG	NA|151aa|up_3|CP024170.1_2468910_2469363_+	cd04496, SSB_OBF, SSB_OBF: A subfamily of OB folds similar to the OB fold of ssDNA-binding protein (SSB)	NA|190aa|up_2|CP024170.1_2469378_2469948_+	NA	NA|72aa|up_1|CP024170.1_2469944_2470160_+	pfam12728, HTH_17, Helix-turn-helix domain	NA|409aa|up_0|CP024170.1_2470143_2471370_+	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|197aa|down_0|CP024170.1_2471850_2472441_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|152aa|down_1|CP024170.1_2472450_2472906_+	NA	NA|241aa|down_2|CP024170.1_2472906_2473629_+	pfam07947, YhhN, YhhN family	NA|125aa|down_3|CP024170.1_2473625_2474000_+	COG1188, COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]	NA|471aa|down_4|CP024170.1_2474063_2475476_+	cd00085, HNHc, HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins	NA|302aa|down_5|CP024170.1_2475496_2476402_-	pfam00293, NUDIX, NUDIX domain	NA|507aa|down_6|CP024170.1_2476463_2477984_-	PRK03003, PRK03003, GTP-binding protein Der; Reviewed	NA|241aa|down_7|CP024170.1_2477976_2478699_-	PRK09518, PRK09518, bifunctional cytidylate kinase/GTPase Der; Reviewed	NA|380aa|down_8|CP024170.1_2478691_2479831_-	PRK06545, PRK06545, prephenate dehydrogenase; Validated	NA|269aa|down_9|CP024170.1_2479827_2480634_-	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis]
GCA_003856715.1_ASM385671v1	CP024170	Microbacterium sp. Y-01 chromosome, complete genome	8	3708981-3709142	8	CRISPRCasFinder	no		WYL,csa3,cas3,DEDDh	Orphan	CCCCGACCCCCGGTCGATCCCCCGA	25	0	0	NA	NA	NA	2	2	Orphan	WYL,csa3,cas3,DEDDh	NA|203aa|up_3|CP024170.1_3704831_3705440_+,NA|678aa|down_4|CP024170.1_3714322_3716356_+	NA|385aa|up_9|CP024170.1_3698317_3699472_+	cd19994, PBP1_ChvE, periplasmic sugar binding protein ChvE that interacts with a bacterial two-component signaling system	NA|514aa|up_8|CP024170.1_3699537_3701079_+	PRK13549, PRK13549, xylose transporter ATP-binding subunit; Provisional	NA|393aa|up_7|CP024170.1_3701075_3702254_+	COG4214, XylH, ABC-type xylose transport system, permease component [Carbohydrate transport and metabolism]	NA|393aa|up_6|CP024170.1_3702292_3703471_+	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|259aa|up_5|CP024170.1_3703467_3704244_+	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]	NA|148aa|up_4|CP024170.1_3704266_3704710_-	pfam11070, DUF2871, Protein of unknown function (DUF2871)	NA|203aa|up_3|CP024170.1_3704831_3705440_+	NA	NA|208aa|up_2|CP024170.1_3705470_3706094_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|432aa|up_1|CP024170.1_3706090_3707386_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|218aa|up_0|CP024170.1_3707429_3708083_+	TIGR00257, IMPACT_family_member_HI_0722, uncharacterized protein, YigZ family	NA|422aa|down_0|CP024170.1_3710313_3711579_+	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold	NA|299aa|down_1|CP024170.1_3711583_3712480_+	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|281aa|down_2|CP024170.1_3712476_3713319_+	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|328aa|down_3|CP024170.1_3713333_3714317_+	cd18610, GH130_BT3780-like, Glycosyl hydrolase family 130, such as beta-mammosidase BT3780 and BACOVA_03624	NA|678aa|down_4|CP024170.1_3714322_3716356_+	NA	NA|141aa|down_5|CP024170.1_3716414_3716837_+	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|484aa|down_6|CP024170.1_3716900_3718352_+	pfam00199, Catalase, Catalase	NA|267aa|down_7|CP024170.1_3718460_3719261_+	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold	NA|181aa|down_8|CP024170.1_3719348_3719891_-	PRK14054, PRK14054, peptide-methionine (S)-S-oxide reductase	NA|163aa|down_9|CP024170.1_3719887_3720376_-	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB
