The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP034101	Bordetella pertussis strain BPD2 chromosome, complete genome	4104911	26684	100700	4104911	holin,transposase	Xanthomonas_phage(14.29%)	59	NA	NA
AZH00632.1|26684_27635_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH00633.1|27643_28192_+	phospholipid:lipid A palmitoyltransferase	NA	NA	NA	NA	NA
AZH00634.1|28188_28797_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
AZH00635.1|28979_29450_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
AZH00636.1|29456_30716_-	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
AZH00637.1|30768_31581_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
AZH00638.1|31695_32250_+	cysteine dioxygenase	NA	NA	NA	NA	NA
AZH00639.1|32259_33249_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZH00640.1|33428_34148_-	VOC family protein	NA	NA	NA	NA	NA
AZH00641.1|34164_36900_-	protein translocase subunit SecA	NA	NA	NA	NA	NA
AZH04032.1|37079_38066_-	M23 family metallopeptidase	NA	A0A292GJG6	Xanthomonas_phage	51.8	3.4e-27
AZH00642.1|38107_38602_+	flagellar hook-length control protein FliK	NA	NA	NA	NA	NA
AZH00643.1|38713_39637_-	UDP-3-O-acyl-N-acetylglucosamine deacetylase	NA	NA	NA	NA	NA
AZH00644.1|39865_41050_-	cell division protein FtsZ	NA	NA	NA	NA	NA
AZH00645.1|41238_42465_-	cell division protein FtsA	NA	NA	NA	NA	NA
AZH00646.1|42469_43291_-	cell division protein FtsQ	NA	NA	NA	NA	NA
AZH00647.1|43303_44254_-	D-alanine--D-alanine ligase	NA	NA	NA	NA	NA
AZH00648.1|44250_45657_-	UDP-N-acetylmuramate--L-alanine ligase	NA	NA	NA	NA	NA
AZH00649.1|45653_46727_-	undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase	NA	NA	NA	NA	NA
AZH00650.1|46723_47917_-	putative lipid II flippase FtsW	NA	NA	NA	NA	NA
AZH00651.1|47913_49446_-	UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase	NA	NA	NA	NA	NA
AZH00652.1|49442_50612_-	phospho-N-acetylmuramoyl-pentapeptide- transferase	NA	NA	NA	NA	NA
AZH00653.1|50601_53439_-	bifunctional UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase MurE/UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase MurF	NA	NA	NA	NA	NA
AZH04033.1|53435_55136_-	penicillin-binding protein 2	NA	NA	NA	NA	NA
AZH00654.1|55162_55441_-	cell division protein FtsL	NA	NA	NA	NA	NA
AZH00655.1|55440_56535_-	ribosomal RNA small subunit methyltransferase H	NA	NA	NA	NA	NA
AZH00656.1|56543_57035_-	transcriptional regulator MraZ	NA	NA	NA	NA	NA
AZH00657.1|57774_59583_+	ATP-binding cassette domain-containing protein	NA	A0A1B0RXA0	Streptococcus_phage	28.6	1.6e-43
AZH00658.1|59622_60702_-	dihydroorotase	NA	NA	NA	NA	NA
AZH00659.1|60698_61892_-	amidohydrolase	NA	NA	NA	NA	NA
AZH00660.1|62041_62320_+	DNA topoisomerase III	NA	NA	NA	NA	NA
AZH00661.1|62641_63034_-	hypothetical protein	NA	NA	NA	NA	NA
AZH04034.1|69746_70223_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
AZH00662.1|70375_71488_+	4-hydroxyphenylpyruvate dioxygenase	NA	NA	NA	NA	NA
AZH00663.1|71555_72116_-	peptide-methionine (S)-S-oxide reductase	NA	NA	NA	NA	NA
AZH00664.1|72139_72472_-	cytochrome C	NA	NA	NA	NA	NA
AZH04035.1|72455_74144_-	dihydroxy-acid dehydratase	NA	NA	NA	NA	NA
AZH00665.1|74263_75052_+	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA	NA
AZH00666.1|75759_76710_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH00667.1|77154_77466_-	cell division protein ZapA	NA	NA	NA	NA	NA
AZH00668.1|77465_77996_-	hypothetical protein	NA	NA	NA	NA	NA
AZH00669.1|78158_79109_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH00670.1|79398_79863_+	tripartite tricarboxylate transporter TctB family protein	NA	NA	NA	NA	NA
AZH00671.1|79877_81383_+	tripartite tricarboxylate transporter permease	NA	NA	NA	NA	NA
AZH00672.1|81636_83244_+	gamma-glutamyltransferase family protein	NA	NA	NA	NA	NA
AZH00673.1|83299_84205_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZH00674.1|84645_85596_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH00675.1|85734_86487_+	uracil-DNA glycosylase	NA	A0A1Y0B680	Bovine_alphaherpesvirus	47.5	2.5e-46
AZH00676.1|86725_88450_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	32.9	9.5e-49
AZH00677.1|88469_89729_+	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AZH00678.1|89743_90838_-	CCA-adding enzyme	NA	A0A0F6YPT7	Sinorhizobium_phage	50.5	2.4e-50
AZH00679.1|90834_92961_-	lytic transglycosylase domain-containing protein	NA	A0A0S2SXL7	Bacillus_phage	36.6	5.5e-14
AZH00680.1|92973_93654_+	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA	NA
AZH00681.1|93931_95305_+	MFS transporter	NA	NA	NA	NA	NA
AZH00682.1|95306_96326_+	histone deacetylase family protein	NA	A0A2K9L473	Tupanvirus	31.7	3.4e-22
AZH00683.1|96389_97361_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZH00684.1|98473_99424_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH00685.1|99522_100365_-	methylenetetrahydrofolate reductase [NAD(P)H]	NA	NA	NA	NA	NA
AZH00686.1|100364_100700_-|holin	phage holin family protein	holin	NA	NA	NA	NA
>prophage 2
CP034101	Bordetella pertussis strain BPD2 chromosome, complete genome	4104911	119123	171482	4104911	protease,integrase,transposase	Erwinia_phage(25.0%)	41	157148:157166	177036:177054
AZH00704.1|119123_119663_+|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
AZH00705.1|119684_121019_+|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A191ZC11	Erwinia_phage	29.6	3.5e-43
AZH04037.1|121032_121338_-	RND transporter	NA	NA	NA	NA	NA
AZH00706.1|121762_122344_+	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA	NA
AZH00707.1|122425_123376_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH04038.1|124736_126215_+	phospholipase D family protein	NA	NA	NA	NA	NA
AZH00708.1|126221_127331_-	molybdenum ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.5	7.5e-23
AZH00709.1|127342_128023_-	molybdate ABC transporter permease subunit	NA	NA	NA	NA	NA
AZH00710.1|128044_128800_-	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZH00711.1|128935_129820_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZH00712.1|129907_130489_+	zf-CGNR multi-domain protein	NA	NA	NA	NA	NA
AZH00713.1|130581_130704_-	hypothetical protein	NA	NA	NA	NA	NA
AZH00714.1|130749_131049_-	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
AZH04039.1|131200_131626_-	hypothetical protein	NA	NA	NA	NA	NA
AZH00715.1|133832_134336_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
AZH00716.1|134351_135302_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH00717.1|135288_135486_-	hypothetical protein	NA	NA	NA	NA	NA
AZH00718.1|135829_136603_-	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZH00719.1|136735_137746_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZH00720.1|137897_139553_-	gamma-glutamyltransferase family protein	NA	NA	NA	NA	NA
AZH00721.1|139607_139949_-	cupin domain-containing protein	NA	NA	NA	NA	NA
AZH00722.1|139962_141402_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZH00723.1|141534_142350_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
AZH00724.1|142368_142557_+	hypothetical protein	NA	NA	NA	NA	NA
AZH00725.1|142543_143494_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH00726.1|144881_145829_+	hypothetical protein	NA	NA	NA	NA	NA
AZH00727.1|146055_146796_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZH00728.1|146881_147832_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH00729.1|149273_150845_-	winged helix family transcriptional regulator	NA	NA	NA	NA	NA
AZH00730.1|151177_153031_+	hypothetical protein	NA	NA	NA	NA	NA
AZH00731.1|153075_155640_+	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA	NA
AZH00732.1|156058_157009_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
157148:157166	attL	CTGCCTGGCGTGGCCGAGT	NA	NA	NA	NA
AZH00733.1|159874_160369_-	DUF4276 family protein	NA	NA	NA	NA	NA
AZH00734.1|160385_161336_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH00735.1|161322_161523_-	hypothetical protein	NA	NA	NA	NA	NA
AZH00736.1|161519_162731_-	chromosome segregation protein SMC	NA	NA	NA	NA	NA
AZH00737.1|162746_165698_-	restriction endonuclease subunit M	NA	G8I4P9	Mycobacterium_phage	25.1	2.9e-21
AZH00738.1|165699_168819_-	restriction endonuclease	NA	NA	NA	NA	NA
AZH04040.1|168815_168956_-	DEAD/DEAH box helicase	NA	NA	NA	NA	NA
AZH00739.1|168966_170013_-	Fic family protein	NA	NA	NA	NA	NA
AZH00740.1|170354_171482_-|integrase	site-specific integrase	integrase	A0A1B0VMI6	Pseudomonas_phage	33.6	1.4e-48
177036:177054	attR	ACTCGGCCACGCCAGGCAG	NA	NA	NA	NA
>prophage 3
CP034101	Bordetella pertussis strain BPD2 chromosome, complete genome	4104911	223239	276980	4104911	transposase	Staphylococcus_phage(33.33%)	49	NA	NA
AZH00781.1|223239_224190_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZH00782.1|224594_225239_-	urease accessory protein UreG	NA	NA	NA	NA	NA
AZH00783.1|225263_225848_-	urease accessory protein UreF	NA	NA	NA	NA	NA
AZH00784.1|225948_226566_-	urease accessory protein UreE	NA	NA	NA	NA	NA
AZH00785.1|226568_228284_-	urease subunit alpha	NA	NA	NA	NA	NA
AZH00786.1|228280_228589_-	urease subunit beta	NA	NA	NA	NA	NA
AZH00787.1|228605_229241_-	HupE/UreJ family protein	NA	NA	NA	NA	NA
AZH00788.1|229267_229570_-	urease subunit gamma	NA	NA	NA	NA	NA
AZH00789.1|229670_230525_-	urease accessory protein	NA	NA	NA	NA	NA
AZH00790.1|230712_230937_-	hypothetical protein	NA	NA	NA	NA	NA
AZH00791.1|231106_231379_+	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
AZH00792.1|231796_232204_-	GFA family protein	NA	NA	NA	NA	NA
AZH00793.1|232573_233368_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZH00794.1|233468_234704_+	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
AZH00795.1|234772_235789_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZH00796.1|235785_237177_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
AZH00797.1|237173_238370_+	MFS transporter	NA	NA	NA	NA	NA
AZH00798.1|238366_239905_-	SpoVR family protein	NA	NA	NA	NA	NA
AZH00799.1|239901_241161_-	YeaH/YhbH family protein	NA	NA	NA	NA	NA
AZH00800.1|243101_244052_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH00801.1|244818_245913_-	CoA transferase	NA	NA	NA	NA	NA
AZH00802.1|245905_247240_-	phenylacetate--CoA ligase family protein	NA	NA	NA	NA	NA
AZH00803.1|247193_247877_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZH00804.1|247902_249066_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZH00805.1|249062_250064_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZH00806.1|250063_250936_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZH00807.1|250932_251682_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
AZH00808.1|251678_252470_-	ATP-binding cassette domain-containing protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
AZH00809.1|252466_253606_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZH00810.1|253914_254667_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZH00811.1|254700_255483_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
AZH00812.1|255486_255876_+	DNA-binding protein	NA	NA	NA	NA	NA
AZH00813.1|257015_257879_+	3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZH00814.1|257914_259003_+	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA	NA
AZH00815.1|258999_259950_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH00816.1|259936_260350_-	hypothetical protein	NA	NA	NA	NA	NA
AZH00817.1|260303_263282_+	hypothetical protein	NA	NA	NA	NA	NA
AZH00818.1|264208_265087_+	fatty acid desaturase	NA	NA	NA	NA	NA
AZH00819.1|267035_267986_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH00820.1|267982_268450_-	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
AZH00821.1|268492_269263_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AZH00822.1|269283_270084_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
AZH00823.1|270094_271504_+	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA	NA
AZH00824.1|271598_272384_+	enoyl-[acyl-carrier-protein] reductase FabI	NA	NA	NA	NA	NA
AZH04042.1|272623_273640_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
AZH00825.1|273747_274140_-	OsmC family peroxiredoxin	NA	NA	NA	NA	NA
AZH00826.1|274277_274958_+	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
AZH00827.1|274962_275961_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZH00828.1|276029_276980_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 4
CP034101	Bordetella pertussis strain BPD2 chromosome, complete genome	4104911	283135	342435	4104911	transposase,tRNA	Acinetobacter_phage(27.27%)	48	NA	NA
AZH00832.1|283135_284899_+|tRNA	glutamine--tRNA ligase	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
AZH00833.1|285010_285889_+	septum site-determining protein MinC	NA	NA	NA	NA	NA
AZH00834.1|286001_286817_+	septum site-determining protein MinD	NA	NA	NA	NA	NA
AZH00835.1|286820_287072_+	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
AZH04043.1|287156_288173_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
AZH00836.1|288503_288725_-	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
AZH00837.1|291085_292003_-	DMT family transporter	NA	NA	NA	NA	NA
AZH00838.1|292500_293709_-	ABC transporter permease	NA	NA	NA	NA	NA
AZH00839.1|293788_295360_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZH00840.1|295477_296413_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
AZH00841.1|296601_297546_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	23.2	8.4e-07
AZH00842.1|297614_297830_-	hypothetical protein	NA	NA	NA	NA	NA
AZH00843.1|298113_303831_+	excinuclease ABC subunit A	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	39.5	1.0e-195
AZH00844.1|303836_304964_+	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	37.8	3.8e-38
AZH00845.1|305019_305646_+	aminotransferase	NA	NA	NA	NA	NA
AZH04044.1|305917_306934_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
AZH00846.1|307029_307740_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
AZH00847.1|307736_308726_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZH00848.1|308857_310453_+	acyl-CoA synthetase	NA	NA	NA	NA	NA
AZH00849.1|310455_311193_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZH00850.1|311348_312221_-|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
AZH00851.1|312489_313710_+	MFS transporter	NA	NA	NA	NA	NA
AZH00852.1|313706_314366_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
AZH00853.1|314437_315070_+	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
AZH00854.1|315099_315618_+	flavin reductase	NA	NA	NA	NA	NA
AZH00855.1|315628_316738_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZH00856.1|316784_317639_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
AZH00857.1|317640_318543_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZH00858.1|319765_320716_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH00859.1|322472_323462_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH00860.1|323637_324426_-	indole-3-glycerol-phosphate synthase	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
AZH00861.1|324422_325454_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
AZH00862.1|325472_326036_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
AZH00863.1|326091_327612_-	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
AZH00864.1|327875_328580_-	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
AZH00865.1|328587_329325_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
AZH00866.1|329430_329805_+	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
AZH00867.1|329847_331137_+	hypothetical protein	NA	NA	NA	NA	NA
AZH00868.1|331133_332303_+	UbiH/UbiF family hydroxylase	NA	NA	NA	NA	NA
AZH00869.1|332299_333139_+	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA	NA
AZH00870.1|333198_334134_+	D-2-hydroxyacid dehydrogenase family protein	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
AZH00871.1|334146_335097_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH00872.1|335195_336158_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
AZH00873.1|336189_336549_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
AZH00874.1|336673_337576_+	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
AZH00875.1|337577_339350_-	M61 family peptidase	NA	NA	NA	NA	NA
AZH00876.1|339384_340161_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZH00877.1|341484_342435_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 5
CP034101	Bordetella pertussis strain BPD2 chromosome, complete genome	4104911	357373	415446	4104911	tRNA,transposase	Planktothrix_phage(12.5%)	47	NA	NA
AZH00890.1|357373_358324_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH00891.1|358452_359586_-	M20 family peptidase	NA	NA	NA	NA	NA
AZH00892.1|359629_360535_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZH00893.1|360537_362238_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	1.0e-15
AZH00894.1|362234_363155_-	ABC transporter permease	NA	NA	NA	NA	NA
AZH00895.1|363162_364140_-	ABC transporter permease	NA	NA	NA	NA	NA
AZH00896.1|364198_365233_-	succinylglutamate desuccinylase	NA	NA	NA	NA	NA
AZH00897.1|367207_367444_-	hypothetical protein	NA	NA	NA	NA	NA
AZH00898.1|367570_368434_-	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
AZH00899.1|368522_369344_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AZH00900.1|369423_370161_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZH00901.1|370157_371150_-	nitronate monooxygenase	NA	NA	NA	NA	NA
AZH00902.1|371263_371926_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZH00903.1|371970_373119_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZH00904.1|375442_376393_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZH00905.1|376733_377684_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZH00906.1|377782_378733_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH00907.1|379029_379527_+	hypothetical protein	NA	NA	NA	NA	NA
AZH00908.1|379569_381345_+	copper resistance system multicopper oxidase	NA	NA	NA	NA	NA
AZH04046.1|381391_382219_+	copper resistance protein B	NA	NA	NA	NA	NA
AZH00909.1|382225_382960_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AZH00910.1|384129_384924_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZH00911.1|385213_385804_+	cysteine dioxygenase	NA	NA	NA	NA	NA
AZH00912.1|385837_387166_-	amidase	NA	NA	NA	NA	NA
AZH00913.1|387240_388386_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZH00914.1|388497_389496_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH00915.1|389458_389893_+	carbon monoxide dehydrogenase	NA	NA	NA	NA	NA
AZH00916.1|391409_392294_+	DMT family transporter	NA	NA	NA	NA	NA
AZH00917.1|392290_393496_-	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
AZH00918.1|393492_394353_-	endonuclease	NA	NA	NA	NA	NA
AZH00919.1|394465_396256_-|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	25.5	6.5e-08
AZH00920.1|396296_396962_-	DUF502 domain-containing protein	NA	A0A2I7S9X1	Vibrio_phage	28.4	6.7e-11
AZH00921.1|396962_397271_-	zinc ribbon domain-containing protein	NA	NA	NA	NA	NA
AZH00922.1|397436_398723_-	hypothetical protein	NA	NA	NA	NA	NA
AZH00923.1|400156_401107_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH00924.1|403058_404273_-	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA	NA
AZH00925.1|404378_405368_+	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	37.7	4.3e-38
AZH00926.1|405364_405973_+	HAD-IIIA family hydrolase	NA	E3T535	Cafeteria_roenbergensis_virus	26.1	5.2e-10
AZH00927.1|405985_406615_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
AZH00928.1|406611_407232_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
AZH00929.1|407263_408055_+	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.4	9.5e-20
AZH00930.1|408897_409362_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
AZH00931.1|409380_410307_+	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
AZH00932.1|410360_411647_-	cytochrome c	NA	NA	NA	NA	NA
AZH00933.1|412577_413450_+	RNase adaptor protein RapZ	NA	A0A1P8D5W0	Corynebacterium_phage	34.5	2.4e-08
AZH00934.1|413446_414397_+	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	47.2	6.9e-17
AZH00935.1|414495_415446_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 7
CP034101	Bordetella pertussis strain BPD2 chromosome, complete genome	4104911	946447	1016483	4104911	transposase,tRNA	Natrialba_phage(12.5%)	60	NA	NA
AZH01406.1|946447_948367_+|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	tRNA	NA	NA	NA	NA
AZH01407.1|948363_949056_+	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA	NA
AZH01408.1|949052_949850_+	ParA family protein	NA	Q8JL10	Natrialba_phage	34.9	5.6e-20
AZH01409.1|949856_950618_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AZH01410.1|950661_951579_+	ParB/RepB/Spo0J family partition protein	NA	I3NLC2	Bifidobacterium_phage	38.1	1.9e-16
AZH01411.1|953168_954359_+	elongation factor Tu	NA	A0A1V0SLW6	Klosneuvirus	29.2	3.1e-14
AZH01412.1|954597_954978_+	preprotein translocase subunit SecE	NA	NA	NA	NA	NA
AZH01413.1|954987_955521_+	transcription termination/antitermination protein NusG	NA	G3MAW2	Bacillus_virus	30.5	1.4e-11
AZH01414.1|955584_956016_+	50S ribosomal protein L11	NA	NA	NA	NA	NA
AZH01415.1|956018_956717_+	50S ribosomal protein L1	NA	NA	NA	NA	NA
AZH01416.1|956959_957484_+	50S ribosomal protein L10	NA	NA	NA	NA	NA
AZH01417.1|957565_957949_+	50S ribosomal protein L7/L12	NA	NA	NA	NA	NA
AZH01418.1|958108_962221_+	DNA-directed RNA polymerase subunit beta	NA	A0A0N9R0J7	Chrysochromulina_ericina_virus	28.8	2.4e-21
AZH01419.1|962220_966465_+	DNA-directed RNA polymerase subunit beta'	NA	A0A2I7QNZ7	Vibrio_phage	24.7	3.5e-68
AZH04064.1|966573_966978_-	lipoprotein	NA	NA	NA	NA	NA
AZH01420.1|967218_968394_+	hypothetical protein	NA	NA	NA	NA	NA
AZH01421.1|970799_971906_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA	NA
AZH01422.1|972917_973733_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AZH01423.1|973729_974680_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH01424.1|974761_975097_-	CoA transferase	NA	NA	NA	NA	NA
AZH01425.1|975121_975556_-	hypothetical protein	NA	NA	NA	NA	NA
AZH01426.1|975588_976815_-	thiolase family protein	NA	NA	NA	NA	NA
AZH01427.1|976811_977309_-	dehydratase	NA	NA	NA	NA	NA
AZH04065.1|977516_978425_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZH01428.1|978610_979453_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AZH01429.1|979495_980917_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
AZH01430.1|981072_982023_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZH01431.1|982019_983210_-	MFS transporter	NA	NA	NA	NA	NA
AZH01432.1|983396_984371_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
AZH01433.1|984372_986511_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
AZH01434.1|986507_987047_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
AZH01435.1|987050_987779_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
AZH01436.1|987765_988659_+	M48 family peptidase	NA	NA	NA	NA	NA
AZH01437.1|988729_989125_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
AZH01438.1|989134_989665_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.4	3.7e-12
AZH01439.1|989793_990093_-	DUF1974 domain-containing protein	NA	NA	NA	NA	NA
AZH01440.1|990110_991061_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH01441.1|991560_992196_+	hypothetical protein	NA	NA	NA	NA	NA
AZH01442.1|992167_992404_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
AZH01443.1|992531_993425_+	AEC family transporter	NA	NA	NA	NA	NA
AZH01444.1|994594_995842_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
AZH01445.1|995838_996453_+	methionine biosynthesis protein MetW	NA	NA	NA	NA	NA
AZH01446.1|996588_997539_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH01447.1|997581_998838_+	muropeptide transporter	NA	NA	NA	NA	NA
AZH01448.1|1000069_1000804_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
AZH01449.1|1000809_1001400_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	3.2e-20
AZH01450.1|1001424_1002114_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
AZH01451.1|1002110_1002872_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZH01452.1|1002951_1003851_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZH01453.1|1003944_1004895_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH01454.1|1005695_1006922_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
AZH01455.1|1006921_1007341_-	transcriptional regulator	NA	NA	NA	NA	NA
AZH04066.1|1007524_1008466_-	hypothetical protein	NA	NA	NA	NA	NA
AZH04067.1|1008889_1009726_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZH01456.1|1009920_1010502_-	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
AZH01457.1|1010514_1010832_-	ferredoxin	NA	NA	NA	NA	NA
AZH01458.1|1010935_1011994_-	oxidoreductase	NA	NA	NA	NA	NA
AZH01459.1|1012028_1013300_-	TRAP transporter large permease	NA	NA	NA	NA	NA
AZH01460.1|1013929_1015111_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
AZH01461.1|1015532_1016483_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 8
CP034101	Bordetella pertussis strain BPD2 chromosome, complete genome	4104911	1024081	1082555	4104911	tRNA,transposase	Planktothrix_phage(22.22%)	54	NA	NA
AZH01469.1|1024081_1025032_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH04068.1|1025106_1026051_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZH01470.1|1026047_1027922_-	polysaccharide biosynthesis protein	NA	A0A2P1ELS8	Moumouvirus	26.9	2.0e-23
AZH01471.1|1029269_1029974_-	DUF2837 family protein	NA	NA	NA	NA	NA
AZH01472.1|1029970_1031077_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
AZH01473.1|1031338_1031932_-	sugar transferase	NA	NA	NA	NA	NA
AZH01474.1|1031928_1033116_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	NA	NA	NA	NA
AZH01475.1|1033178_1034438_-	glycosyltransferase WbuB	NA	NA	NA	NA	NA
AZH01476.1|1034461_1035550_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A0N9R0B2	Chrysochromulina_ericina_virus	36.3	4.8e-46
AZH01477.1|1035557_1036658_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	A0A2K9L0G1	Tupanvirus	29.7	3.3e-31
AZH01478.1|1036661_1037237_-	N-acetyltransferase	NA	NA	NA	NA	NA
AZH01479.1|1037240_1038293_-	gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
AZH01480.1|1038423_1039431_+	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA	NA
AZH01481.1|1039432_1040719_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA	NA
AZH01482.1|1040735_1040891_-	hypothetical protein	NA	NA	NA	NA	NA
AZH01483.1|1040915_1041719_-	type III pantothenate kinase	NA	NA	NA	NA	NA
AZH01484.1|1041715_1042582_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
AZH01485.1|1042650_1043787_+	ABC transporter permease	NA	NA	NA	NA	NA
AZH01486.1|1043786_1044626_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	32.4	9.1e-21
AZH01487.1|1045558_1046161_+	hypothetical protein	NA	NA	NA	NA	NA
AZH01488.1|1046190_1046844_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZH01489.1|1046976_1048233_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	40.5	6.2e-66
AZH01490.1|1048235_1049180_+	D-amino acid aminotransferase	NA	NA	NA	NA	NA
AZH01491.1|1049255_1049531_+	DUF493 family protein	NA	NA	NA	NA	NA
AZH01492.1|1049538_1050201_+	octanoyltransferase	NA	NA	NA	NA	NA
AZH01493.1|1050262_1051264_+	lipoyl synthase	NA	NA	NA	NA	NA
AZH01494.1|1051278_1051827_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	54.0	9.7e-48
AZH01495.1|1051884_1052781_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
AZH01496.1|1052777_1053839_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	44.8	1.6e-78
AZH01497.1|1053874_1054825_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZH01498.1|1055724_1056918_+	cystathionine beta-lyase	NA	NA	NA	NA	NA
AZH01499.1|1056999_1057629_-	thiol:disulfide interchange protein DsbA/DsbL	NA	NA	NA	NA	NA
AZH01500.1|1057690_1058374_-	SPOR domain-containing protein	NA	NA	NA	NA	NA
AZH01501.1|1058383_1060066_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
AZH01502.1|1060353_1060701_+	DUF1840 domain-containing protein	NA	NA	NA	NA	NA
AZH01503.1|1060791_1061109_+	hypothetical protein	NA	NA	NA	NA	NA
AZH04069.1|1061391_1062408_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
AZH01504.1|1062483_1063284_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
AZH01505.1|1063280_1064156_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
AZH01506.1|1064166_1065459_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZH01507.1|1065501_1066542_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	6.0e-22
AZH01508.1|1066647_1067469_-	phosphodiesterase	NA	NA	NA	NA	NA
AZH01509.1|1067569_1068520_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH01510.1|1068618_1069524_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.7	9.8e-21
AZH01511.1|1069520_1070354_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
AZH01512.1|1071190_1072201_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
AZH01513.1|1072197_1072587_-	hypothetical protein	NA	NA	NA	NA	NA
AZH01514.1|1073480_1074734_+	amidase	NA	NA	NA	NA	NA
AZH01515.1|1074824_1076525_-	2-isopropylmalate synthase	NA	NA	NA	NA	NA
AZH01516.1|1076951_1077599_-	hypothetical protein	NA	NA	NA	NA	NA
AZH01517.1|1077597_1079037_+	RNA polymerase sigma-54 factor	NA	NA	NA	NA	NA
AZH01518.1|1079129_1079432_+	bacterioferritin-associated ferredoxin	NA	NA	NA	NA	NA
AZH01519.1|1079459_1080338_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZH01520.1|1081604_1082555_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 9
CP034101	Bordetella pertussis strain BPD2 chromosome, complete genome	4104911	1111329	1171816	4104911	tRNA,protease,transposase	Diachasmimorpha_longicaudata_entomopoxvirus(11.11%)	52	NA	NA
AZH01541.1|1111329_1112280_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH01542.1|1113723_1114626_-	YgcG family protein	NA	NA	NA	NA	NA
AZH01543.1|1114603_1115233_-	LemA family protein	NA	NA	NA	NA	NA
AZH04072.1|1115563_1116946_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	29.5	5.3e-42
AZH01544.1|1116979_1117609_+	threonine transporter RhtB	NA	NA	NA	NA	NA
AZH01545.1|1117657_1119265_+	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	37.8	9.3e-14
AZH01546.1|1119289_1119973_+	hypothetical protein	NA	NA	NA	NA	NA
AZH01547.1|1120054_1120531_-	bacterioferritin	NA	NA	NA	NA	NA
AZH01548.1|1120571_1120751_+	hypothetical protein	NA	NA	NA	NA	NA
AZH01549.1|1120737_1121688_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH01550.1|1122803_1123331_+	META domain-containing protein	NA	NA	NA	NA	NA
AZH01551.1|1123422_1124238_+	META domain-containing protein	NA	NA	NA	NA	NA
AZH01552.1|1124298_1125033_+	sulfurtransferase	NA	NA	NA	NA	NA
AZH01553.1|1125070_1127149_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	23.6	1.5e-27
AZH01554.1|1127398_1127671_-	hypothetical protein	NA	NA	NA	NA	NA
AZH01555.1|1127769_1128858_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
AZH01556.1|1128861_1130766_+	outer membrane protein assembly factor	NA	NA	NA	NA	NA
AZH01557.1|1130762_1134413_+	DUF490 domain-containing protein	NA	NA	NA	NA	NA
AZH01558.1|1134473_1135037_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	75.3	2.6e-72
AZH01559.1|1135044_1135467_-	glyoxalase	NA	NA	NA	NA	NA
AZH01560.1|1135494_1135914_-	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
AZH04073.1|1135942_1136389_-	GNAT family N-acetyltransferase	NA	Q9AZG4	Lactococcus_phage	29.4	1.2e-08
AZH01561.1|1136515_1137013_+	hypothetical protein	NA	NA	NA	NA	NA
AZH01562.1|1137167_1139438_+	lysine decarboxylase	NA	NA	NA	NA	NA
AZH01563.1|1139486_1140719_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZH01564.1|1140817_1141768_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH01565.1|1141813_1142506_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	73.8	2.4e-83
AZH01566.1|1142502_1143396_+	ZIP family metal transporter	NA	NA	NA	NA	NA
AZH01567.1|1143790_1144891_+	aminomethyltransferase	NA	NA	NA	NA	NA
AZH01568.1|1144972_1145347_+	glycine cleavage system protein GcvH	NA	NA	NA	NA	NA
AZH01569.1|1145406_1148271_+	glycine dehydrogenase (aminomethyl-transferring)	NA	E3SN07	Prochlorococcus_phage	51.4	1.2e-261
AZH01570.1|1148415_1149156_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
AZH01571.1|1149225_1150437_+	CoA transferase	NA	NA	NA	NA	NA
AZH01572.1|1150465_1151434_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZH01573.1|1152047_1152998_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZH01574.1|1153154_1153478_+	PsiF repeat family protein	NA	NA	NA	NA	NA
AZH01575.1|1153582_1154632_-	cyclase family protein	NA	NA	NA	NA	NA
AZH01576.1|1154628_1155453_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA	NA
AZH01577.1|1155453_1155750_-	YciI family protein	NA	NA	NA	NA	NA
AZH01578.1|1155775_1156051_-	muconolactone Delta-isomerase	NA	NA	NA	NA	NA
AZH01579.1|1156107_1156752_-	CoA transferase subunit B	NA	NA	NA	NA	NA
AZH01580.1|1156751_1157438_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
AZH04074.1|1157567_1158419_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZH01581.1|1158469_1159195_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
AZH01582.1|1159226_1160576_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
AZH01583.1|1160687_1161620_-	3-hydroxyacyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
AZH04075.1|1162077_1164873_-|protease	serine protease autotransporter SphB1	protease	NA	NA	NA	NA
AZH01584.1|1165466_1168409_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
AZH01585.1|1168480_1169200_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A0A0RPC6	Escherichia_phage	43.9	8.0e-50
AZH01586.1|1169238_1169787_-	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.7	1.2e-21
AZH01587.1|1169941_1170841_+	virginiamycin B lyase	NA	NA	NA	NA	NA
AZH01588.1|1170865_1171816_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 10
CP034101	Bordetella pertussis strain BPD2 chromosome, complete genome	4104911	1179749	1247913	4104911	tRNA,protease,transposase	Bacillus_phage(20.0%)	58	NA	NA
AZH01595.1|1179749_1180700_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH01596.1|1180786_1181737_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZH01597.1|1182780_1183578_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
AZH01598.1|1184527_1184938_+	4-carboxymuconolactone decarboxylase	NA	NA	NA	NA	NA
AZH01599.1|1185959_1186703_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZH01600.1|1186746_1187790_-	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZH01601.1|1187960_1190063_+	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
AZH01602.1|1191473_1192430_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZH01603.1|1192448_1192940_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
AZH01604.1|1192936_1194292_-	polynucleotide adenylyltransferase PcnB	NA	A0A1B1IVF3	uncultured_Mediterranean_phage	36.8	3.4e-25
AZH01605.1|1194292_1194991_-	HAD-IB family hydrolase	NA	NA	NA	NA	NA
AZH01606.1|1194987_1195689_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA	NA
AZH01607.1|1195941_1196991_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.6	5.6e-68
AZH01608.1|1197096_1198038_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
AZH01609.1|1198034_1199924_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.8	3.3e-79
AZH01610.1|1200010_1200649_+	hypothetical protein	NA	NA	NA	NA	NA
AZH04076.1|1200791_1202036_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	30.3	4.1e-17
AZH01611.1|1202107_1202644_-|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
AZH01612.1|1202795_1204187_+	class II fumarate hydratase	NA	NA	NA	NA	NA
AZH01613.1|1204203_1205184_-	AEC family transporter	NA	NA	NA	NA	NA
AZH01614.1|1205319_1206303_+	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA	NA
AZH01615.1|1206367_1207267_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZH01616.1|1207373_1209128_+	gamma-glutamyltransferase	NA	NA	NA	NA	NA
AZH01617.1|1209135_1210260_-	CoA transferase	NA	NA	NA	NA	NA
AZH01618.1|1210273_1211254_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZH01619.1|1211984_1212935_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH01620.1|1213494_1214040_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA	NA
AZH01621.1|1214123_1215743_+	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
AZH01622.1|1215758_1216913_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
AZH01623.1|1216926_1217052_+	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA	NA
AZH01624.1|1217048_1218800_+	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	23.8	3.4e-09
AZH01625.1|1218796_1220476_+	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	27.6	3.6e-16
AZH01626.1|1220511_1221087_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.1	1.4e-28
AZH01627.1|1222229_1222508_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
AZH01628.1|1223551_1224502_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH01629.1|1224488_1224704_-	hypothetical protein	NA	NA	NA	NA	NA
AZH01630.1|1224779_1224941_+	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
AZH01631.1|1224948_1225089_+	hypothetical protein	NA	NA	NA	NA	NA
AZH01632.1|1225607_1226057_-|protease	ClpXP protease specificity-enhancing factor	protease	NA	NA	NA	NA
AZH01633.1|1226066_1226678_-	glutathione S-transferase	NA	NA	NA	NA	NA
AZH01634.1|1226836_1227691_-	cytochrome c1	NA	NA	NA	NA	NA
AZH01635.1|1227710_1229093_-	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA	NA
AZH04077.1|1229157_1229799_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
AZH01636.1|1229938_1230397_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
AZH01637.1|1230421_1231198_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
AZH01638.1|1231251_1232388_+	PDZ domain-containing protein	NA	W5SAB9	Pithovirus	31.2	1.2e-07
AZH01639.1|1233432_1234059_-	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
AZH01640.1|1234081_1235008_-	glyoxylate/hydroxypyruvate reductase A	NA	NA	NA	NA	NA
AZH01641.1|1235016_1236603_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZH01642.1|1236599_1237604_-	alpha/beta hydrolase	NA	A0A2L2DMU8	Acanthamoeba_polyphaga_mimivirus	31.5	7.5e-30
AZH01643.1|1237803_1238664_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AZH01644.1|1238695_1239697_-	2-isopropylmalate synthase	NA	NA	NA	NA	NA
AZH01645.1|1239767_1240577_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AZH01646.1|1240654_1242514_+	dihydroxy-acid dehydratase	NA	NA	NA	NA	NA
AZH01647.1|1242642_1243845_-	MFS transporter	NA	NA	NA	NA	NA
AZH01648.1|1243958_1244840_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZH01649.1|1246342_1246903_-	5'-3'-deoxyribonucleotidase	NA	A0A1E1EUN3	Acanthamoeba_castellanii_mimivirus	30.8	3.2e-14
AZH01650.1|1246962_1247913_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 11
CP034101	Bordetella pertussis strain BPD2 chromosome, complete genome	4104911	1311714	1377682	4104911	tRNA,transposase	Streptococcus_phage(33.33%)	60	NA	NA
AZH01711.1|1311714_1312665_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH01712.1|1313713_1314352_+	trimeric intracellular cation channel family protein	NA	NA	NA	NA	NA
AZH01713.1|1314388_1315783_-	NADP-specific glutamate dehydrogenase	NA	NA	NA	NA	NA
AZH01714.1|1316154_1316943_-	exodeoxyribonuclease III	NA	M1PSC0	Streptococcus_phage	25.7	1.2e-19
AZH01715.1|1317047_1317755_+	orotate phosphoribosyltransferase	NA	NA	NA	NA	NA
AZH01716.1|1317868_1319323_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	tRNA	NA	NA	NA	NA
AZH01717.1|1319325_1320864_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	tRNA	NA	NA	NA	NA
AZH01718.1|1320866_1321175_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	tRNA	NA	NA	NA	NA
AZH01719.1|1321405_1322449_+	rod shape-determining protein	NA	NA	NA	NA	NA
AZH01720.1|1322537_1323422_+	rod shape-determining protein MreC	NA	NA	NA	NA	NA
AZH01721.1|1323408_1323972_+	rod shape-determining protein MreD	NA	NA	NA	NA	NA
AZH01722.1|1323985_1325938_+	penicillin-binding protein 2	NA	NA	NA	NA	NA
AZH01723.1|1325934_1327071_+	rod shape-determining protein RodA	NA	NA	NA	NA	NA
AZH01724.1|1327096_1328152_-	Ldh family oxidoreductase	NA	NA	NA	NA	NA
AZH01725.1|1328162_1329656_-	DASS family sodium-coupled anion symporter	NA	NA	NA	NA	NA
AZH01726.1|1329868_1330444_-	nucleoid occlusion factor SlmA	NA	NA	NA	NA	NA
AZH01727.1|1330493_1331240_-	pyrimidine 5'-nucleotidase	NA	NA	NA	NA	NA
AZH01728.1|1331239_1332142_-	acetylglutamate kinase	NA	NA	NA	NA	NA
AZH01729.1|1332403_1333192_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZH01730.1|1333332_1333824_-	TlpA family protein disulfide reductase	NA	NA	NA	NA	NA
AZH01731.1|1333820_1334564_-	BON domain-containing protein	NA	NA	NA	NA	NA
AZH01732.1|1334560_1335163_-	phosphoheptose isomerase	NA	A0A067XQR2	Caulobacter_phage	34.8	5.7e-17
AZH01733.1|1335162_1335639_-	YraN family protein	NA	NA	NA	NA	NA
AZH01734.1|1335763_1336702_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	NA	NA	NA	NA
AZH01735.1|1336698_1337271_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	42.5	3.2e-25
AZH01736.1|1337267_1338218_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH01737.1|1338354_1339272_+	reductase	NA	NA	NA	NA	NA
AZH01738.1|1339268_1339517_+	glutaredoxin family protein	NA	NA	NA	NA	NA
AZH01739.1|1339513_1340719_+	CoA transferase	NA	NA	NA	NA	NA
AZH01740.1|1340791_1341787_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZH01741.1|1341809_1343030_-	CoA transferase	NA	NA	NA	NA	NA
AZH01742.1|1343026_1343671_-	hypothetical protein	NA	NA	NA	NA	NA
AZH01743.1|1345401_1346211_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZH01744.1|1346428_1347469_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	42.5	6.1e-59
AZH01745.1|1347567_1348551_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH01746.1|1348477_1349179_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZH01747.1|1349227_1349998_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AZH01748.1|1349994_1351236_-	CoA transferase	NA	NA	NA	NA	NA
AZH01749.1|1351340_1353047_-	thiamine pyrophosphate-requiring protein	NA	NA	NA	NA	NA
AZH01750.1|1353043_1353940_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZH01751.1|1353980_1355570_-	sulfurtransferase	NA	NA	NA	NA	NA
AZH01752.1|1355619_1356612_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZH01753.1|1356680_1357280_-	hypothetical protein	NA	NA	NA	NA	NA
AZH04083.1|1357740_1358718_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZH01754.1|1358796_1359747_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH01755.1|1359835_1360750_+	DMT family transporter	NA	NA	NA	NA	NA
AZH01756.1|1360746_1361406_+	LysE family translocator	NA	NA	NA	NA	NA
AZH01757.1|1361495_1362419_+	alpha/beta fold hydrolase	NA	A0A1C9C5K3	Heterosigma_akashiwo_virus	27.2	4.8e-07
AZH01758.1|1362424_1362880_-	multidrug/biocide efflux PACE transporter	NA	NA	NA	NA	NA
AZH01759.1|1362876_1363980_-	ChbG/HpnK family deacetylase	NA	NA	NA	NA	NA
AZH01760.1|1363899_1364208_+	GtrA family protein	NA	NA	NA	NA	NA
AZH01761.1|1364167_1365787_-	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
AZH01762.1|1366970_1367465_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AZH01763.1|1367557_1368535_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH01764.1|1368730_1369936_+	sodium/glutamate symporter	NA	NA	NA	NA	NA
AZH01765.1|1369932_1371444_+	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
AZH01766.1|1371459_1372773_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
AZH01767.1|1372963_1373143_-	hypothetical protein	NA	NA	NA	NA	NA
AZH01768.1|1373552_1374287_-	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	43.8	1.4e-41
AZH01769.1|1376731_1377682_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 12
CP034101	Bordetella pertussis strain BPD2 chromosome, complete genome	4104911	1581085	1681197	4104911	tRNA,terminase,tail,transposase	uncultured_Caudovirales_phage(13.33%)	109	NA	NA
AZH01942.1|1581085_1582036_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH01943.1|1582134_1582935_-	hypothetical protein	NA	NA	NA	NA	NA
AZH01944.1|1582996_1583380_+	thioredoxin	NA	NA	NA	NA	NA
AZH01945.1|1583391_1584825_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.4	1.5e-52
AZH01946.1|1585031_1585361_-	AzlD domain-containing protein	NA	NA	NA	NA	NA
AZH04093.1|1585363_1586032_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZH01947.1|1586295_1587216_+	branched-chain amino acid transaminase	NA	NA	NA	NA	NA
AZH01948.1|1587262_1587475_+	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
AZH01949.1|1587497_1587920_+	DUF4440 domain-containing protein	NA	NA	NA	NA	NA
AZH01950.1|1587936_1589037_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
AZH01951.1|1589133_1590651_-	peptidase	NA	NA	NA	NA	NA
AZH01952.1|1590726_1591566_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
AZH01953.1|1591587_1592469_-	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
AZH01954.1|1592550_1593645_-	porin	NA	NA	NA	NA	NA
AZH01955.1|1593905_1594856_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZH01956.1|1594939_1595299_-	hypothetical protein	NA	NA	NA	NA	NA
AZH01957.1|1595680_1596718_-	sodium:calcium antiporter	NA	NA	NA	NA	NA
AZH01958.1|1597034_1598375_+	M24 family metallopeptidase	NA	NA	NA	NA	NA
AZH01959.1|1598384_1598837_-	hypothetical protein	NA	NA	NA	NA	NA
AZH01960.1|1598933_1600115_+	UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase	NA	NA	NA	NA	NA
AZH01961.1|1600174_1601206_+|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
AZH01962.1|1601246_1601486_+	Fis family transcriptional regulator	NA	NA	NA	NA	NA
AZH01963.1|1601555_1603145_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
AZH01964.1|1603144_1603693_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
AZH01965.1|1603773_1604346_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
AZH01966.1|1604364_1605276_-	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
AZH01967.1|1605349_1606318_-	threo-3-hydroxy-L-aspartate ammonia-lyase	NA	NA	NA	NA	NA
AZH01968.1|1606440_1607514_+	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
AZH01969.1|1607518_1609339_-	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
AZH01970.1|1609415_1610366_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH01971.1|1610454_1610790_+	ASCH domain-containing protein	NA	NA	NA	NA	NA
AZH01972.1|1610923_1611574_+	carbonic anhydrase	NA	NA	NA	NA	NA
AZH01973.1|1611595_1613014_-	amidase	NA	NA	NA	NA	NA
AZH01974.1|1613083_1613839_-	hypothetical protein	NA	NA	NA	NA	NA
AZH04094.1|1613807_1614566_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZH01975.1|1614576_1615458_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZH01976.1|1615474_1616182_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	8.2e-07
AZH01977.1|1616184_1616943_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.4	4.4e-14
AZH01978.1|1617152_1618895_+	nitrite/sulfite reductase	NA	NA	NA	NA	NA
AZH01979.1|1618887_1619412_+	DUF934 domain-containing protein	NA	NA	NA	NA	NA
AZH01980.1|1619451_1620246_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZH01981.1|1620413_1621487_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
AZH01982.1|1621585_1622536_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH01983.1|1622787_1623000_-	hypothetical protein	NA	NA	NA	NA	NA
AZH04095.1|1623065_1623677_-	S24 family peptidase	NA	NA	NA	NA	NA
AZH01984.1|1624156_1624477_-	hypothetical protein	NA	NA	NA	NA	NA
AZH01985.1|1624469_1625168_-	hypothetical protein	NA	NA	NA	NA	NA
AZH01986.1|1625182_1625404_-	hypothetical protein	NA	NA	NA	NA	NA
AZH01987.1|1625421_1626372_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH01988.1|1627047_1627497_+|terminase	terminase	terminase	C7U0W1	Enterobacteria_phage	61.5	5.2e-39
AZH01989.1|1627483_1628761_+|terminase	terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
AZH01990.1|1628763_1630182_+	DUF4055 domain-containing protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
AZH04096.1|1630210_1631266_+	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	50.6	2.6e-97
AZH01991.1|1631271_1631514_+	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
AZH01992.1|1631636_1632239_+	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
AZH01993.1|1633715_1634666_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH01994.1|1634683_1635331_+	hypothetical protein	NA	R9TJ64	Synechococcus_phage	71.1	2.7e-65
AZH01995.1|1635340_1635592_+	hypothetical protein	NA	NA	NA	NA	NA
AZH01996.1|1635654_1636137_+	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
AZH01997.1|1636138_1636339_+	hypothetical protein	NA	NA	NA	NA	NA
AZH01998.1|1636338_1636734_+	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
AZH01999.1|1636730_1637129_+	HK97 gp10 family phage protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
AZH02000.1|1637125_1637548_+	hypothetical protein	NA	NA	NA	NA	NA
AZH02001.1|1637555_1638056_+	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
AZH04097.1|1638310_1638829_+|tail	phage tail protein	tail	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
AZH02002.1|1638838_1639168_+	hypothetical protein	NA	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
AZH02003.1|1639185_1639476_+	hypothetical protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
AZH02004.1|1639501_1642114_+|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
AZH02005.1|1642123_1642483_+	hypothetical protein	NA	NA	NA	NA	NA
AZH02006.1|1642550_1643084_+	DUF1833 domain-containing protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
AZH02007.1|1643080_1643470_+	peptidoglycan endopeptidase	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
AZH02008.1|1643462_1647419_+	DUF1983 domain-containing protein	NA	A0A0B5A1N2	Achromobacter_phage	40.9	1.8e-223
AZH02009.1|1647423_1647840_+	hypothetical protein	NA	NA	NA	NA	NA
AZH02010.1|1647820_1648018_+	hypothetical protein	NA	NA	NA	NA	NA
AZH02011.1|1648058_1648322_+	hypothetical protein	NA	A0A1B0V3F2	Roseobacter_phage	41.8	7.2e-09
AZH02012.1|1648321_1649134_+	hypothetical protein	NA	NA	NA	NA	NA
AZH02013.1|1649138_1649381_+	hypothetical protein	NA	NA	NA	NA	NA
AZH02014.1|1649359_1649911_+	lysozyme	NA	NA	NA	NA	NA
AZH02015.1|1649892_1650426_+	DUF2514 family protein	NA	NA	NA	NA	NA
AZH02016.1|1650422_1650704_-	hypothetical protein	NA	NA	NA	NA	NA
AZH02017.1|1651046_1651247_+	hypothetical protein	NA	NA	NA	NA	NA
AZH02018.1|1651253_1651925_-	SOS response-associated peptidase	NA	Q5QF62	Pseudomonas_virus	39.9	4.7e-36
AZH02019.1|1652280_1652967_-	response regulator	NA	NA	NA	NA	NA
AZH02020.1|1652947_1653520_-	RNA pyrophosphohydrolase	NA	NA	NA	NA	NA
AZH02021.1|1653585_1655316_+|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	29.4	4.6e-11
AZH02022.1|1655368_1655797_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
AZH02023.1|1655799_1656480_+	protein TolQ	NA	NA	NA	NA	NA
AZH02024.1|1656479_1656938_+	protein TolR	NA	NA	NA	NA	NA
AZH02025.1|1656974_1657949_+	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
AZH02026.1|1657965_1659282_+	Tol-Pal system protein TolB	NA	NA	NA	NA	NA
AZH02027.1|1659313_1659811_+	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
AZH02028.1|1659897_1660587_+	tol-pal system protein YbgF	NA	NA	NA	NA	NA
AZH02029.1|1660586_1661636_+	iron ABC transporter permease	NA	NA	NA	NA	NA
AZH02030.1|1661632_1662427_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	2.4e-15
AZH02031.1|1662595_1662946_+	hypothetical protein	NA	NA	NA	NA	NA
AZH02032.1|1662921_1663479_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZH02033.1|1664403_1664622_+	hypothetical protein	NA	NA	NA	NA	NA
AZH02034.1|1664608_1665559_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH04098.1|1667837_1668926_+	hypothetical protein	NA	NA	NA	NA	NA
AZH02035.1|1668928_1670371_-	pyruvate kinase	NA	NA	NA	NA	NA
AZH02036.1|1670475_1671621_+	glycerate kinase	NA	W6LM47	Streptococcus_phage	42.2	1.7e-41
AZH02037.1|1671652_1672450_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
AZH02038.1|1672474_1674034_-	chaperone SurA	NA	NA	NA	NA	NA
AZH02039.1|1674030_1676403_-	LPS-assembly protein LptD	NA	NA	NA	NA	NA
AZH02040.1|1676512_1677616_+	aminoglycoside phosphotransferase	NA	NA	NA	NA	NA
AZH02041.1|1677615_1678308_+	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
AZH02042.1|1678451_1679153_+	hypothetical protein	NA	NA	NA	NA	NA
AZH02043.1|1679137_1679515_-	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
AZH02044.1|1680246_1681197_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 13
CP034101	Bordetella pertussis strain BPD2 chromosome, complete genome	4104911	1692484	1762153	4104911	transposase	Streptococcus_phage(25.0%)	55	NA	NA
AZH02055.1|1692484_1693435_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH02056.1|1694089_1695187_+	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
AZH02057.1|1695220_1696486_+	saccharopine dehydrogenase family protein	NA	NA	NA	NA	NA
AZH02058.1|1696643_1697594_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH02059.1|1697837_1698428_+	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
AZH02060.1|1698443_1700888_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
AZH02061.1|1701007_1701979_-	FecR family protein	NA	NA	NA	NA	NA
AZH02062.1|1702110_1702635_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
AZH02063.1|1702594_1703545_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH02064.1|1703766_1705962_-	DUF1156 domain-containing protein	NA	NA	NA	NA	NA
AZH02065.1|1706034_1706442_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AZH02066.1|1706389_1706578_+	hypothetical protein	NA	NA	NA	NA	NA
AZH02067.1|1706564_1707515_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH02068.1|1707630_1708074_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
AZH02069.1|1708136_1708931_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AZH02070.1|1709096_1710233_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	44.8	5.8e-63
AZH02071.1|1710303_1711437_-	GTPase ObgE	NA	NA	NA	NA	NA
AZH02072.1|1711586_1711847_-	50S ribosomal protein L27	NA	NA	NA	NA	NA
AZH04099.1|1711880_1712192_-	50S ribosomal protein L21	NA	NA	NA	NA	NA
AZH02073.1|1712616_1713765_+	fumarylacetoacetate hydrolase	NA	NA	NA	NA	NA
AZH02074.1|1713879_1714845_+	octaprenyl diphosphate synthase	NA	NA	NA	NA	NA
AZH02075.1|1715113_1715980_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZH02076.1|1716110_1718159_+	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA	NA
AZH02077.1|1718176_1720174_+	hydantoinase B/oxoprolinase family protein	NA	NA	NA	NA	NA
AZH02078.1|1720208_1721546_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
AZH02079.1|1721808_1723662_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZH02080.1|1723716_1725198_+	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
AZH02081.1|1725213_1725801_-	toxin-activating lysine-acyltransferase	NA	NA	NA	NA	NA
AZH04100.1|1725883_1726063_+	hypothetical protein	NA	NA	NA	NA	NA
AZH02082.1|1726249_1731370_+	bifunctional adenylate cyclase toxin/hemolysin CyaA	NA	NA	NA	NA	NA
AZH02083.1|1731447_1733586_+	cyclolysin secretion/processing ATP-binding protein CyaB	NA	W8CYL7	Bacillus_phage	29.2	2.7e-45
AZH02084.1|1733582_1734905_+	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA	NA
AZH02085.1|1734906_1736331_+	TolC family protein	NA	NA	NA	NA	NA
AZH02086.1|1736421_1737330_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZH02087.1|1738482_1739418_+	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
AZH02088.1|1739617_1741312_+	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
AZH02089.1|1741346_1742273_+	VOC family protein	NA	NA	NA	NA	NA
AZH02090.1|1742341_1743439_+	hypothetical protein	NA	NA	NA	NA	NA
AZH02091.1|1743457_1744321_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.9	9.6e-34
AZH02092.1|1744332_1745115_+	ABC transporter permease	NA	NA	NA	NA	NA
AZH02093.1|1745111_1746230_+	DUF2817 domain-containing protein	NA	NA	NA	NA	NA
AZH02094.1|1746226_1747759_+	long-chain fatty acid--CoA ligase	NA	NA	NA	NA	NA
AZH02095.1|1747799_1748807_+	zinc-binding dehydrogenase	NA	NA	NA	NA	NA
AZH02096.1|1748951_1749674_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZH02097.1|1749689_1750712_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA	NA
AZH02098.1|1751028_1751763_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZH02099.1|1751847_1753593_+	acetolactate synthase catalytic subunit	NA	NA	NA	NA	NA
AZH02100.1|1753589_1754342_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
AZH02101.1|1754386_1755343_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZH02102.1|1755431_1755998_+	hypothetical protein	NA	NA	NA	NA	NA
AZH02103.1|1756005_1756866_-	D-amino-acid transaminase	NA	NA	NA	NA	NA
AZH02104.1|1756895_1757639_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	42.4	3.5e-32
AZH02105.1|1757655_1758339_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
AZH02106.1|1759176_1760091_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZH02107.1|1761202_1762153_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 14
CP034101	Bordetella pertussis strain BPD2 chromosome, complete genome	4104911	1832198	1900174	4104911	transposase	Bacillus_phage(33.33%)	58	NA	NA
AZH04103.1|1832198_1833215_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
AZH02165.1|1833411_1834395_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZH02166.1|1835993_1837382_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
AZH02167.1|1837412_1838402_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZH02168.1|1838512_1839745_-	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
AZH02169.1|1840026_1840827_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZH02170.1|1840849_1843081_-	BCCT family transporter	NA	NA	NA	NA	NA
AZH02171.1|1843868_1844315_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
AZH02172.1|1844336_1845083_-	triose-phosphate isomerase	NA	NA	NA	NA	NA
AZH02173.1|1845226_1846204_-	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA	NA
AZH02174.1|1846837_1847449_+	PIN domain-containing protein	NA	K4HZX4	Acidithiobacillus_phage	32.5	3.3e-12
AZH02175.1|1847442_1848660_-	threonine ammonia-lyase	NA	NA	NA	NA	NA
AZH02176.1|1848800_1849751_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH02177.1|1849747_1850467_-	lipoprotein	NA	NA	NA	NA	NA
AZH02178.1|1850587_1852747_-	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
AZH02179.1|1852837_1853107_-	30S ribosomal protein S15	NA	NA	NA	NA	NA
AZH02180.1|1853195_1853402_-	hypothetical protein	NA	NA	NA	NA	NA
AZH02181.1|1853400_1853928_+	lipoprotein	NA	NA	NA	NA	NA
AZH02182.1|1853946_1854726_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
AZH02183.1|1854893_1855910_-	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
AZH02184.1|1855982_1856474_-	acetolactate synthase small subunit	NA	NA	NA	NA	NA
AZH02185.1|1856484_1858200_-	acetolactate synthase 3 catalytic subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	30.3	3.1e-60
AZH02186.1|1859363_1860314_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH02187.1|1860310_1862161_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	1.3e-27
AZH02188.1|1862541_1863201_+	thiopurine S-methyltransferase	NA	NA	NA	NA	NA
AZH02189.1|1863288_1863441_+	hypothetical protein	NA	NA	NA	NA	NA
AZH02190.1|1863549_1863717_+	hypothetical protein	NA	NA	NA	NA	NA
AZH02191.1|1863728_1864409_-	DUF3313 domain-containing protein	NA	NA	NA	NA	NA
AZH02192.1|1864690_1865407_+	flagellar brake protein	NA	NA	NA	NA	NA
AZH02193.1|1865421_1866723_-	phospholipase	NA	NA	NA	NA	NA
AZH02194.1|1868867_1871756_+	HD domain-containing protein	NA	NA	NA	NA	NA
AZH02195.1|1871979_1873332_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
AZH02196.1|1873360_1873882_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
AZH02197.1|1873878_1875333_+	carboxylase	NA	NA	NA	NA	NA
AZH02198.1|1875367_1875616_+	hypothetical protein	NA	NA	NA	NA	NA
AZH02199.1|1875721_1876597_+	amidohydrolase	NA	NA	NA	NA	NA
AZH02200.1|1876622_1877678_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
AZH02201.1|1877690_1878482_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZH02202.1|1878514_1879885_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
AZH02203.1|1881061_1882012_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH02204.1|1882064_1882286_+	hypothetical protein	NA	NA	NA	NA	NA
AZH02205.1|1882445_1882658_+	hypothetical protein	NA	NA	NA	NA	NA
AZH02206.1|1882777_1883896_+	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
AZH02207.1|1883992_1884208_+	hypothetical protein	NA	NA	NA	NA	NA
AZH02208.1|1884401_1884653_+	hypothetical protein	NA	NA	NA	NA	NA
AZH02209.1|1884765_1885716_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH02210.1|1885712_1886096_-	ferredoxin	NA	NA	NA	NA	NA
AZH02211.1|1886150_1887968_-	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	27.9	5.7e-44
AZH02212.1|1888114_1888942_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	47.4	1.7e-67
AZH02213.1|1888987_1889968_+	aldo/keto reductase	NA	NA	NA	NA	NA
AZH02214.1|1889964_1890177_-	hypothetical protein	NA	NA	NA	NA	NA
AZH02215.1|1890173_1891355_-	PepSY domain-containing protein	NA	NA	NA	NA	NA
AZH02216.1|1891518_1892253_+	serine/threonine protein phosphatase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	49.2	1.9e-62
AZH02217.1|1892254_1894867_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
AZH02218.1|1895002_1896916_-	S9 family peptidase	NA	NA	NA	NA	NA
AZH04104.1|1897531_1897942_-	PaaI family thioesterase	NA	NA	NA	NA	NA
AZH02219.1|1898039_1899125_+	DNA polymerase IV	NA	NA	NA	NA	NA
AZH02220.1|1899223_1900174_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 15
CP034101	Bordetella pertussis strain BPD2 chromosome, complete genome	4104911	1923352	1993620	4104911	transposase	Streptococcus_phage(14.29%)	55	NA	NA
AZH02245.1|1923352_1924303_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH02246.1|1924383_1925295_+	cysteine synthase CysM	NA	A0A1X9I5K7	Streptococcus_phage	38.8	8.0e-47
AZH02247.1|1925355_1926501_-	lytic murein transglycosylase B	NA	NA	NA	NA	NA
AZH02248.1|1926520_1927435_+	histone deacetylase family protein	NA	A0A2K9KZC4	Tupanvirus	34.7	9.8e-45
AZH02249.1|1927506_1928256_+	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA	NA
AZH02250.1|1928255_1929185_+	electron transfer flavoprotein subunit alpha	NA	NA	NA	NA	NA
AZH02251.1|1929428_1931255_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZH02252.1|1931337_1931979_+	peroxiredoxin	NA	NA	NA	NA	NA
AZH02253.1|1932168_1933203_+	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZH02254.1|1935039_1936104_+	sulfate/thiosulfate import ATP-binding protein CysA	NA	G3M9Y6	Bacillus_virus	30.3	3.8e-24
AZH04105.1|1936901_1937810_+	sulfate adenylyltransferase subunit CysD	NA	NA	NA	NA	NA
AZH02255.1|1939297_1940572_+	PA0069 family radical SAM protein	NA	NA	NA	NA	NA
AZH02256.1|1940725_1941106_+	hypothetical protein	NA	NA	NA	NA	NA
AZH02257.1|1941113_1941986_-	multidrug DMT transporter permease	NA	NA	NA	NA	NA
AZH02258.1|1942291_1942672_+	50S ribosomal protein L19	NA	NA	NA	NA	NA
AZH02259.1|1942882_1943608_+	CoA pyrophosphatase	NA	NA	NA	NA	NA
AZH02260.1|1943703_1944654_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH02261.1|1944758_1945808_+	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA	NA
AZH04106.1|1945945_1946962_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
AZH02262.1|1948470_1949043_-	chorismate lyase	NA	NA	NA	NA	NA
AZH02263.1|1949102_1949834_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
AZH04107.1|1949885_1950803_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZH02264.1|1951610_1954790_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
AZH02265.1|1956239_1956491_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
AZH02266.1|1956636_1957287_-	SCO family protein	NA	NA	NA	NA	NA
AZH02267.1|1957437_1959552_-	M3 family peptidase	NA	NA	NA	NA	NA
AZH02268.1|1959627_1960479_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	39.8	2.1e-33
AZH02269.1|1960475_1961102_-	DNA-binding response regulator	NA	NA	NA	NA	NA
AZH02270.1|1961098_1962853_-	PAS domain S-box protein	NA	NA	NA	NA	NA
AZH02271.1|1963145_1965851_+	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
AZH02272.1|1965863_1967525_+	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA	NA
AZH02273.1|1967537_1969328_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.2	2.4e-39
AZH02274.1|1969549_1970725_-	FliC/FljB family flagellin	NA	NA	NA	NA	NA
AZH02275.1|1970767_1971718_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH02276.1|1971816_1972557_-	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
AZH02277.1|1972751_1974788_+	transketolase	NA	NA	NA	NA	NA
AZH02278.1|1974805_1975816_+	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
AZH02279.1|1975933_1977127_+	phosphoglycerate kinase	NA	NA	NA	NA	NA
AZH02280.1|1977156_1977930_-	enoyl-[acyl-carrier-protein] reductase FabI	NA	NA	NA	NA	NA
AZH02281.1|1977926_1979117_-	acetate kinase	NA	NA	NA	NA	NA
AZH02282.1|1979142_1980081_-	phosphate acetyltransferase	NA	NA	NA	NA	NA
AZH02283.1|1980077_1982426_-	DUF3141 domain-containing protein	NA	NA	NA	NA	NA
AZH02284.1|1982580_1983288_-	glutathione transferase	NA	NA	NA	NA	NA
AZH02285.1|1983325_1984459_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZH02286.1|1984735_1985284_-	damage-inducible protein DinB	NA	NA	NA	NA	NA
AZH02287.1|1985302_1985788_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AZH02288.1|1985965_1986904_+	curved DNA-binding protein	NA	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	24.1	5.6e-11
AZH02289.1|1986906_1987224_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
AZH02290.1|1987269_1988214_+	hypothetical protein	NA	NA	NA	NA	NA
AZH02291.1|1989894_1990545_+	molybdopterin adenylyltransferase	NA	NA	NA	NA	NA
AZH02292.1|1990598_1990934_+	hypothetical protein	NA	NA	NA	NA	NA
AZH02293.1|1990930_1991791_+	M23 family metallopeptidase	NA	A0A292GJG6	Xanthomonas_phage	36.1	2.6e-15
AZH02294.1|1991807_1992089_-	hypothetical protein	NA	NA	NA	NA	NA
AZH02295.1|1992162_1992426_-	translation initiation factor IF-1	NA	NA	NA	NA	NA
AZH02296.1|1992669_1993620_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 16
CP034101	Bordetella pertussis strain BPD2 chromosome, complete genome	4104911	2005838	2063201	4104911	tRNA,holin,transposase	uncultured_Mediterranean_phage(37.5%)	43	NA	NA
AZH04108.1|2005838_2006855_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
AZH04109.1|2007685_2008693_+	aldo/keto reductase	NA	NA	NA	NA	NA
AZH02309.1|2008689_2010333_-	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
AZH02310.1|2010329_2011232_-	CBS domain-containing protein	NA	NA	NA	NA	NA
AZH02311.1|2011357_2011831_-	endoribonuclease YbeY	NA	NA	NA	NA	NA
AZH02312.1|2011820_2012843_-	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	45.4	8.7e-50
AZH02313.1|2012839_2014267_-|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
AZH04110.1|2015204_2016221_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
AZH02314.1|2016553_2017489_-	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.5	3.0e-41
AZH02315.1|2017538_2019419_-	protein translocase subunit SecD	NA	NA	NA	NA	NA
AZH02316.1|2019485_2019830_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	40.4	1.0e-10
AZH02317.1|2019974_2021111_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.4	1.9e-85
AZH02318.1|2021107_2022181_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
AZH02319.1|2022338_2023775_+	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
AZH02320.1|2023865_2024507_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
AZH02321.1|2026188_2028921_+	pertactin autotransporter	NA	NA	NA	NA	NA
AZH02322.1|2030672_2031389_+	hypothetical protein	NA	NA	NA	NA	NA
AZH02323.1|2031473_2031791_+	DUF883 domain-containing protein	NA	NA	NA	NA	NA
AZH02324.1|2031831_2032245_+|holin	phage holin family protein	holin	NA	NA	NA	NA
AZH02325.1|2032246_2032606_+	hypothetical protein	NA	NA	NA	NA	NA
AZH02326.1|2032648_2034193_-	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA	NA
AZH02327.1|2034276_2035107_+	transglycosylase	NA	NA	NA	NA	NA
AZH02328.1|2035141_2036296_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
AZH02329.1|2036338_2037211_+	hypothetical protein	NA	NA	NA	NA	NA
AZH02330.1|2040821_2041286_+	barstar family protein 2	NA	NA	NA	NA	NA
AZH02331.1|2041312_2042263_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH02332.1|2042630_2043407_-	phosphate ABC transporter ATP-binding protein PstB	NA	G9BWD6	Planktothrix_phage	28.7	4.3e-17
AZH02333.1|2043451_2044309_-	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
AZH02334.1|2044330_2045347_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
AZH02335.1|2045481_2046522_-	phosphate ABC transporter substrate-binding protein PstS	NA	M4QHS4	Cyanophage	40.2	2.1e-51
AZH02336.1|2046716_2048798_-	polyphosphate kinase 1	NA	NA	NA	NA	NA
AZH02337.1|2049033_2050527_+	exopolyphosphatase	NA	NA	NA	NA	NA
AZH02338.1|2050757_2051552_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AZH02339.1|2051772_2053131_-	phosphoglucosamine mutase	NA	NA	NA	NA	NA
AZH02340.1|2053127_2053970_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	32.5	3.2e-26
AZH02341.1|2053988_2055875_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	M4QMW8	Micromonas_pusilla_virus	41.5	1.4e-109
AZH02342.1|2056112_2056745_-	RlmE family RNA methyltransferase	NA	NA	NA	NA	NA
AZH02343.1|2056763_2057366_+	YhbY family RNA-binding protein	NA	NA	NA	NA	NA
AZH02344.1|2057517_2058468_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH02345.1|2059270_2060071_-	hypothetical protein	NA	NA	NA	NA	NA
AZH02346.1|2060114_2061101_-	homoserine kinase	NA	NA	NA	NA	NA
AZH02347.1|2061240_2062254_+|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
AZH02348.1|2062250_2063201_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 17
CP034101	Bordetella pertussis strain BPD2 chromosome, complete genome	4104911	2242380	2310867	4104911	transposase	Planktothrix_phage(33.33%)	59	NA	NA
AZH02489.1|2242380_2243331_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH02490.1|2244099_2244738_-	glutathione S-transferase	NA	NA	NA	NA	NA
AZH02491.1|2245627_2246074_+	glutamate racemase	NA	NA	NA	NA	NA
AZH02492.1|2246155_2246857_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.4	1.3e-17
AZH02493.1|2246857_2247625_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.4	1.2e-14
AZH02494.1|2247621_2248860_-	high-affinity branched-chain amino acid ABC transporter permease LivM	NA	NA	NA	NA	NA
AZH02495.1|2248859_2249786_-	high-affinity branched-chain amino acid ABC transporter permease LivH	NA	NA	NA	NA	NA
AZH02496.1|2249888_2251004_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZH02497.1|2251019_2251970_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH02498.1|2251956_2252199_-	hypothetical protein	NA	NA	NA	NA	NA
AZH02499.1|2252323_2252905_-	VUT family protein	NA	A0A2I7SAW6	Vibrio_phage	37.3	9.4e-17
AZH02500.1|2252901_2253735_-	pyrroline-5-carboxylate reductase	NA	NA	NA	NA	NA
AZH02501.1|2253945_2255259_+	sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB	NA	NA	NA	NA	NA
AZH02502.1|2255435_2256317_+	sn-glycerol-3-phosphate ABC transporter permease UgpA	NA	NA	NA	NA	NA
AZH02503.1|2256336_2257188_+	sn-glycerol-3-phosphate ABC transporter permease UgpE	NA	NA	NA	NA	NA
AZH02504.1|2257240_2258329_+	sn-glycerol-3-phosphate import ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	31.2	2.2e-19
AZH02505.1|2258439_2259567_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZH02506.1|2259801_2260413_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZH02507.1|2260511_2261462_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZH02508.1|2261683_2262061_-	DUF423 domain-containing protein	NA	NA	NA	NA	NA
AZH02509.1|2262208_2262706_+	DUF2384 domain-containing protein	NA	NA	NA	NA	NA
AZH02510.1|2262702_2263230_+	RES domain-containing protein	NA	NA	NA	NA	NA
AZH02511.1|2263363_2264179_+	iron ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZH02512.1|2264191_2265373_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
AZH02513.1|2265420_2266314_-	phosphatidylserine decarboxylase proenzyme	NA	NA	NA	NA	NA
AZH02514.1|2266440_2266911_-	hypothetical protein	NA	NA	NA	NA	NA
AZH02515.1|2267036_2267864_-	DUF3298 domain-containing protein	NA	NA	NA	NA	NA
AZH02516.1|2267892_2268669_-	lipoate--protein ligase family protein	NA	NA	NA	NA	NA
AZH02517.1|2268665_2268959_-	biotin--protein ligase	NA	NA	NA	NA	NA
AZH02518.1|2268955_2269420_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AZH02519.1|2269431_2270217_-	thiol:disulfide oxidoreductase	NA	NA	NA	NA	NA
AZH02520.1|2270242_2270743_-	glutathione peroxidase	NA	Q6VZR0	Canarypox_virus	38.4	4.7e-25
AZH02521.1|2270825_2272004_-	DUF1501 domain-containing protein	NA	NA	NA	NA	NA
AZH02522.1|2273631_2273967_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
AZH02523.1|2274154_2275603_+	CoA transferase	NA	NA	NA	NA	NA
AZH02524.1|2275660_2276005_+	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	58.4	3.0e-31
AZH02525.1|2276111_2276651_-	peroxiredoxin	NA	NA	NA	NA	NA
AZH02526.1|2276743_2277694_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH02527.1|2277680_2278163_-	hypothetical protein	NA	NA	NA	NA	NA
AZH02528.1|2278432_2278864_-	hypothetical protein	NA	NA	NA	NA	NA
AZH02529.1|2279045_2279450_-	DoxX family protein	NA	NA	NA	NA	NA
AZH02530.1|2280686_2281010_+	hypothetical protein	NA	NA	NA	NA	NA
AZH02531.1|2281012_2281900_-	aldo/keto reductase	NA	NA	NA	NA	NA
AZH02532.1|2281932_2282358_-	universal stress protein	NA	NA	NA	NA	NA
AZH02533.1|2282429_2282783_-	hypothetical protein	NA	NA	NA	NA	NA
AZH02534.1|2283022_2283529_-	hypothetical protein	NA	NA	NA	NA	NA
AZH02535.1|2283567_2284899_-	transcriptional regulator PtsJ	NA	NA	NA	NA	NA
AZH02536.1|2284958_2285774_+	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
AZH02537.1|2285770_2286625_+	pyridoxine/pyridoxal/pyridoxamine kinase	NA	NA	NA	NA	NA
AZH02538.1|2289687_2292231_-	malto-oligosyltrehalose synthase	NA	NA	NA	NA	NA
AZH02539.1|2293597_2295352_-	malto-oligosyltrehalose trehalohydrolase	NA	NA	NA	NA	NA
AZH02540.1|2295348_2297469_-	glycogen debranching enzyme GlgX	NA	NA	NA	NA	NA
AZH02541.1|2297473_2299669_-	1,4-alpha-glucan branching protein GlgB	NA	NA	NA	NA	NA
AZH02542.1|2299665_2303007_-	maltose alpha-D-glucosyltransferase	NA	NA	NA	NA	NA
AZH02543.1|2305809_2306760_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH02544.1|2306825_2307005_-	hypothetical protein	NA	NA	NA	NA	NA
AZH04117.1|2307121_2307844_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
AZH02545.1|2307863_2309009_-	DUF3182 family protein	NA	NA	NA	NA	NA
AZH02546.1|2309916_2310867_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 18
CP034101	Bordetella pertussis strain BPD2 chromosome, complete genome	4104911	2400479	2439069	4104911	protease,transposase	Emiliania_huxleyi_virus(14.29%)	35	NA	NA
AZH02622.1|2400479_2401814_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
AZH02623.1|2401866_2404203_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA	NA
AZH02624.1|2404328_2404892_+	OmpH family outer membrane protein	NA	NA	NA	NA	NA
AZH02625.1|2404900_2405992_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA	NA
AZH02626.1|2406063_2406519_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA	NA
AZH02627.1|2406519_2407314_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA	NA
AZH02628.1|2407310_2408492_+	lipid-A-disaccharide synthase	NA	NA	NA	NA	NA
AZH02629.1|2408478_2409084_+	ribonuclease HII	NA	G9E3X7	Emiliania_huxleyi_virus	40.2	8.8e-26
AZH02630.1|2409080_2409854_+	RNA methyltransferase	NA	NA	NA	NA	NA
AZH02631.1|2409865_2410693_-	phosphoenolpyruvate synthase regulatory protein	NA	NA	NA	NA	NA
AZH02632.1|2410854_2413218_+	phosphoenolpyruvate synthase	NA	A0A1V0SGR7	Hokovirus	35.9	2.2e-165
AZH02633.1|2413285_2414005_-	glutamine amidotransferase	NA	NA	NA	NA	NA
AZH02634.1|2414128_2414554_+	NfeD family protein	NA	NA	NA	NA	NA
AZH02635.1|2414588_2415539_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH02636.1|2415656_2416583_+	paraslipin	NA	NA	NA	NA	NA
AZH02637.1|2416648_2417806_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	36.2	2.3e-14
AZH02638.1|2417786_2418254_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	45.1	6.2e-27
AZH02639.1|2418401_2419352_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH02640.1|2419368_2419803_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
AZH02641.1|2419792_2420143_+	RnfH family protein	NA	NA	NA	NA	NA
AZH02642.1|2420339_2421494_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZH02643.1|2421490_2422663_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AZH02644.1|2422710_2423604_+	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
AZH02645.1|2423649_2424087_+	PaaI family thioesterase	NA	NA	NA	NA	NA
AZH02646.1|2424146_2424836_+	VIT family protein	NA	NA	NA	NA	NA
AZH02647.1|2424845_2425796_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZH02648.1|2425894_2426878_-	transaldolase	NA	H6WFR1	Cyanophage	29.2	5.9e-11
AZH02649.1|2427140_2428238_+	carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.2	5.3e-53
AZH02650.1|2428248_2431491_+	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
AZH02651.1|2432512_2433157_-	histidine phosphatase family protein	NA	NA	NA	NA	NA
AZH02652.1|2433167_2434067_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZH02653.1|2434114_2435200_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.7	6.4e-27
AZH02654.1|2435196_2436891_-	iron ABC transporter permease	NA	NA	NA	NA	NA
AZH02655.1|2437069_2438020_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH02656.1|2438118_2439069_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 19
CP034101	Bordetella pertussis strain BPD2 chromosome, complete genome	4104911	3010653	3064939	4104911	transposase	Erysipelothrix_phage(33.33%)	47	NA	NA
AZH03105.1|3010653_3011604_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZH03106.1|3012474_3013347_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZH03107.1|3013424_3014564_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZH03108.1|3014913_3016179_+	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA	NA
AZH03109.1|3016184_3016712_+	ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA	NA
AZH03110.1|3016716_3017535_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AZH03111.1|3017534_3018257_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
AZH03112.1|3018278_3018593_+	ferredoxin	NA	NA	NA	NA	NA
AZH03113.1|3018589_3019759_+	CoA transferase	NA	NA	NA	NA	NA
AZH03114.1|3019789_3020665_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZH03115.1|3020661_3021981_-	phenylacetate--CoA ligase family protein	NA	NA	NA	NA	NA
AZH03116.1|3022053_3023250_-	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
AZH03117.1|3023260_3024748_-	hydroxymethylglutaryl-CoA synthase family protein	NA	NA	NA	NA	NA
AZH03118.1|3027342_3028242_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZH03119.1|3028379_3029345_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZH03120.1|3029443_3030394_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH03121.1|3030437_3030629_+	hypothetical protein	NA	NA	NA	NA	NA
AZH03122.1|3030615_3031566_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH03123.1|3032610_3032913_-	SelT/SelW/SelH family protein	NA	NA	NA	NA	NA
AZH03124.1|3033072_3033477_+	group III truncated hemoglobin	NA	NA	NA	NA	NA
AZH03125.1|3033469_3034696_+	NnrS family protein	NA	NA	NA	NA	NA
AZH03126.1|3034692_3035139_+	hypothetical protein	NA	NA	NA	NA	NA
AZH03127.1|3035208_3035991_+	exodeoxyribonuclease III	NA	NA	NA	NA	NA
AZH03128.1|3036032_3037538_+	M81 family peptidase	NA	NA	NA	NA	NA
AZH04138.1|3037823_3038618_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
AZH03129.1|3040094_3040916_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZH03130.1|3040934_3041789_-	polysaccharide deacetylase	NA	NA	NA	NA	NA
AZH03131.1|3041792_3042764_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZH03132.1|3042838_3043477_-	hypothetical protein	NA	NA	NA	NA	NA
AZH03133.1|3043448_3043625_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
AZH03134.1|3044110_3045061_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH03135.1|3046198_3046495_-	hypothetical protein	NA	NA	NA	NA	NA
AZH03136.1|3046669_3048022_+	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.6	2.9e-45
AZH03137.1|3051158_3052172_-	flavin-nucleotide-binding protein	NA	NA	NA	NA	NA
AZH03138.1|3052258_3053164_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZH03139.1|3053320_3053665_+	hypothetical protein	NA	NA	NA	NA	NA
AZH03140.1|3053822_3054281_+	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
AZH03141.1|3054294_3056511_+	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
AZH03142.1|3056507_3057569_+	XdhC family protein	NA	NA	NA	NA	NA
AZH03143.1|3057597_3058572_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AZH03144.1|3058523_3059342_-	hypothetical protein	NA	A0A1B1INV8	uncultured_Mediterranean_phage	28.8	2.3e-16
AZH03145.1|3059354_3059963_-	peptidase S16	NA	NA	NA	NA	NA
AZH03146.1|3060137_3060533_+	VOC family protein	NA	NA	NA	NA	NA
AZH03147.1|3060551_3061991_+	DHA2 family efflux MFS transporter permease subunit	NA	A0A0M3UL24	Mycobacterium_phage	37.4	7.4e-55
AZH03148.1|3062019_3062367_+	GFA family protein	NA	NA	NA	NA	NA
AZH03149.1|3062385_3063336_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH03150.1|3063988_3064939_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 20
CP034101	Bordetella pertussis strain BPD2 chromosome, complete genome	4104911	3084583	3125220	4104911	protease,tRNA,transposase	Klosneuvirus(14.29%)	41	NA	NA
AZH03170.1|3084583_3085534_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH03171.1|3086506_3086866_-	CidA/LrgA family protein	NA	NA	NA	NA	NA
AZH03172.1|3086853_3088290_-	dethiobiotin synthase	NA	NA	NA	NA	NA
AZH03173.1|3088286_3088940_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZH03174.1|3088936_3090136_-	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
AZH03175.1|3090233_3091508_+	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	9.6e-14
AZH03176.1|3091504_3092455_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH03177.1|3092621_3093596_+	hypothetical protein	NA	NA	NA	NA	NA
AZH03178.1|3093592_3093736_+	cbb3-type cytochrome oxidase assembly protein CcoS	NA	NA	NA	NA	NA
AZH03179.1|3095357_3096020_+	cytochrome-c oxidase, cbb3-type subunit II	NA	NA	NA	NA	NA
AZH03180.1|3096022_3096199_+	CcoQ/FixQ family Cbb3-type cytochrome c oxidase assembly chaperone	NA	NA	NA	NA	NA
AZH03181.1|3096195_3097134_+	cytochrome-c oxidase, cbb3-type subunit III	NA	NA	NA	NA	NA
AZH03182.1|3097225_3098716_+	cytochrome c oxidase accessory protein CcoG	NA	NA	NA	NA	NA
AZH03183.1|3098801_3098954_+	lipoprotein	NA	NA	NA	NA	NA
AZH03184.1|3098967_3099207_+	hypothetical protein	NA	NA	NA	NA	NA
AZH03185.1|3099302_3100046_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
AZH03186.1|3100054_3100579_+	N-acetyltransferase	NA	NA	NA	NA	NA
AZH03187.1|3100677_3101601_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	33.6	1.6e-23
AZH03188.1|3101597_3102359_+	ABC transporter permease	NA	NA	NA	NA	NA
AZH03189.1|3102374_3103460_-	AI-2E family transporter	NA	NA	NA	NA	NA
AZH03190.1|3103472_3103673_+	hypothetical protein	NA	NA	NA	NA	NA
AZH03191.1|3103659_3104610_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH03192.1|3104708_3105659_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH03193.1|3105618_3106032_-	transcriptional regulator	NA	A0A222YXG1	Escherichia_phage	59.0	3.8e-36
AZH03194.1|3106316_3106616_+	hypothetical protein	NA	NA	NA	NA	NA
AZH03195.1|3107025_3109194_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	30.1	3.1e-36
AZH03196.1|3109773_3109968_+	hypothetical protein	NA	NA	NA	NA	NA
AZH03197.1|3109993_3112024_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	41.9	1.0e-65
AZH03198.1|3112043_3112256_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
AZH03199.1|3112533_3113073_-	phosphoribosyltransferase	NA	NA	NA	NA	NA
AZH03200.1|3113186_3114494_-	adenylosuccinate synthase	NA	A0A160ER07	Powai_lake_megavirus	33.5	3.0e-63
AZH03201.1|3114558_3115716_-	ATP phosphoribosyltransferase regulatory subunit	NA	NA	NA	NA	NA
AZH03202.1|3115899_3116799_-|protease	protease modulator HflC	protease	NA	NA	NA	NA
AZH03203.1|3116817_3118122_-|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
AZH03204.1|3118087_3119194_-	GTPase HflX	NA	NA	NA	NA	NA
AZH03205.1|3119281_3119518_-	RNA-binding protein Hfq	NA	NA	NA	NA	NA
AZH03206.1|3119656_3120727_-	histidinol-phosphate aminotransferase 1	NA	A0A1X6WGT4	Pacmanvirus	25.7	2.5e-15
AZH03207.1|3120730_3122086_-	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
AZH03208.1|3122112_3123273_-	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
AZH03209.1|3123275_3123914_-	hypothetical protein	NA	NA	NA	NA	NA
AZH03210.1|3123915_3125220_-|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
>prophage 21
CP034101	Bordetella pertussis strain BPD2 chromosome, complete genome	4104911	3172133	3227369	4104911	protease,transposase	Lake_Baikal_phage(25.0%)	50	NA	NA
AZH03248.1|3172133_3173084_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH03249.1|3173284_3174094_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AZH03250.1|3174218_3175169_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH03251.1|3175165_3176059_-	methylglyoxal synthase	NA	NA	NA	NA	NA
AZH03252.1|3176183_3176378_-	Fe-S assembly protein IscX	NA	NA	NA	NA	NA
AZH03253.1|3176377_3176719_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
AZH03254.1|3176728_3178591_-	Fe-S protein assembly chaperone HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	42.4	3.0e-101
AZH03255.1|3178720_3179233_-	Fe-S protein assembly co-chaperone HscB	NA	NA	NA	NA	NA
AZH03256.1|3179235_3179559_-	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	52.8	6.8e-25
AZH03257.1|3179560_3179971_-	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	79.0	7.5e-53
AZH03258.1|3180008_3181220_-	IscS subfamily cysteine desulfurase	NA	NA	NA	NA	NA
AZH03259.1|3181237_3181750_-	Fe-S cluster assembly transcriptional regulator IscR	NA	NA	NA	NA	NA
AZH03260.1|3181965_3182457_-	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA	NA
AZH03261.1|3182709_3184746_-	UvrABC system protein B	NA	NA	NA	NA	NA
AZH03262.1|3184823_3186026_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
AZH03263.1|3186076_3186805_+	transcriptional repressor LexA	NA	A0A2H4JG58	uncultured_Caudovirales_phage	50.7	2.8e-10
AZH03264.1|3188362_3189313_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH04141.1|3189883_3190096_-	hypothetical protein	NA	NA	NA	NA	NA
AZH03265.1|3190113_3190845_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZH03266.1|3190879_3191521_-	CoA transferase subunit B	NA	NA	NA	NA	NA
AZH03267.1|3191513_3192230_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
AZH03268.1|3194394_3195171_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
AZH03269.1|3195192_3196350_-	thiolase	NA	NA	NA	NA	NA
AZH03270.1|3196346_3196778_-	hypothetical protein	NA	NA	NA	NA	NA
AZH03271.1|3196774_3197578_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AZH03272.1|3197591_3198047_-	MaoC family dehydratase	NA	NA	NA	NA	NA
AZH03273.1|3198059_3199031_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZH03274.1|3199096_3200320_-	CoA transferase	NA	NA	NA	NA	NA
AZH03275.1|3200547_3201498_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZH03276.1|3201621_3204075_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	52.0	1.5e-220
AZH03277.1|3204263_3205568_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	53.8	3.2e-129
AZH03278.1|3205672_3206326_-|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	57.5	6.8e-56
AZH03279.1|3206328_3207639_-	trigger factor	NA	NA	NA	NA	NA
AZH03280.1|3207817_3208396_+	TIGR00645 family protein	NA	K4K6D8	Caulobacter_phage	33.7	1.0e-23
AZH03281.1|3208507_3208708_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.4	7.4e-14
AZH03282.1|3209053_3209620_-	DUF924 family protein	NA	NA	NA	NA	NA
AZH03283.1|3209703_3209907_-	cold-shock protein CspA	NA	A0A2H4N7Y6	Lake_Baikal_phage	62.1	1.6e-16
AZH03284.1|3210213_3210534_-	hypothetical protein	NA	NA	NA	NA	NA
AZH03285.1|3210575_3210857_-	hypothetical protein	NA	NA	NA	NA	NA
AZH03286.1|3210931_3212188_-	autotransporter Phg	NA	NA	NA	NA	NA
AZH03287.1|3212570_3212900_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
AZH03288.1|3214470_3215292_+	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA	NA
AZH03289.1|3215291_3216431_+	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
AZH03290.1|3216437_3217334_+	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
AZH03291.1|3217330_3219256_+	ATP-binding cassette domain-containing protein	NA	A0A2K9L0W2	Tupanvirus	31.8	1.1e-66
AZH03292.1|3219615_3222228_+	TonB-dependent receptor	NA	NA	NA	NA	NA
AZH03293.1|3222280_3224581_-	DNA helicase II	NA	A7KV33	Bacillus_phage	35.9	9.9e-110
AZH03294.1|3224577_3225786_-	acyl-CoA desaturase	NA	NA	NA	NA	NA
AZH03295.1|3226047_3226422_+	hypothetical protein	NA	NA	NA	NA	NA
AZH03296.1|3226418_3227369_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 22
CP034101	Bordetella pertussis strain BPD2 chromosome, complete genome	4104911	3231524	3298679	4104911	transposase,tRNA	Klosneuvirus(12.5%)	60	NA	NA
AZH03299.1|3231524_3234386_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	25.5	1.0e-71
AZH03300.1|3234388_3234895_+	lipoprotein signal peptidase	NA	NA	NA	NA	NA
AZH03301.1|3234999_3236208_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	30.0	3.8e-36
AZH03302.1|3236209_3237148_-	hypothetical protein	NA	NA	NA	NA	NA
AZH03303.1|3237309_3237783_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
AZH03304.1|3237779_3238730_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH03305.1|3238716_3238896_-	hypothetical protein	NA	NA	NA	NA	NA
AZH03306.1|3238840_3239281_-	DUF937 domain-containing protein	NA	NA	NA	NA	NA
AZH03307.1|3239409_3240639_-	lytic murein transglycosylase	NA	NA	NA	NA	NA
AZH03308.1|3240677_3241499_-	DUF455 family protein	NA	NA	NA	NA	NA
AZH03309.1|3241552_3242704_+	N-acetyltransferase	NA	NA	NA	NA	NA
AZH03310.1|3242795_3243284_-	DUF1854 domain-containing protein	NA	NA	NA	NA	NA
AZH03311.1|3245810_3248384_+	cyanophycin synthetase	NA	NA	NA	NA	NA
AZH03312.1|3248454_3251028_+	cyanophycin synthetase	NA	NA	NA	NA	NA
AZH03313.1|3251293_3251494_+	CsbD family protein	NA	NA	NA	NA	NA
AZH03314.1|3251525_3251687_+	DUF1328 domain-containing protein	NA	NA	NA	NA	NA
AZH03315.1|3251744_3252083_+	BON domain-containing protein	NA	NA	NA	NA	NA
AZH03316.1|3252231_3253182_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH03317.1|3253280_3254000_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.6	1.4e-22
AZH03318.1|3254076_3254625_+	arylesterase	NA	NA	NA	NA	NA
AZH03319.1|3254606_3256622_-	peptidylprolyl isomerase	NA	NA	NA	NA	NA
AZH03320.1|3256804_3257554_+	glycerophosphodiester phosphodiesterase	NA	A0A2H4PGQ5	Escherichia_phage	27.8	1.5e-14
AZH03321.1|3257566_3258430_+	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA	NA
AZH03322.1|3258433_3259849_-	dihydrolipoyl dehydrogenase	NA	NA	NA	NA	NA
AZH03323.1|3259982_3260711_-	glutaredoxin	NA	A0A1D8KSL1	Synechococcus_phage	56.8	9.6e-43
AZH03324.1|3260849_3261050_-	copper chaperone	NA	NA	NA	NA	NA
AZH03325.1|3261225_3261624_+	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA	NA
AZH03326.1|3261647_3263048_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	26.5	7.3e-31
AZH04142.1|3263166_3263919_-	hypothetical protein	NA	NA	NA	NA	NA
AZH03327.1|3264911_3265691_-	3'-5' exonuclease	NA	NA	NA	NA	NA
AZH03328.1|3265687_3266572_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A292GJG6	Xanthomonas_phage	49.5	4.6e-15
AZH04143.1|3266589_3267279_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	46.9	4.2e-32
AZH03329.1|3267353_3268112_-	5'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	51.2	1.4e-68
AZH03330.1|3268237_3268885_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
AZH04144.1|3269152_3270169_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
AZH03331.1|3270266_3271307_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	51.3	6.1e-91
AZH03332.1|3271441_3272734_+	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	36.0	1.7e-66
AZH03333.1|3274093_3274477_+	thioredoxin	NA	V9SJ74	Achromobacter_phage	25.8	8.1e-09
AZH03334.1|3274494_3275082_-	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	35.8	4.7e-16
AZH03335.1|3275119_3276070_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH03336.1|3277054_3277828_-	ABC transporter permease	NA	NA	NA	NA	NA
AZH03337.1|3277824_3278823_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZH03338.1|3278907_3279684_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.2	1.2e-30
AZH03339.1|3279839_3281507_-	ABC-F family ATPase	NA	A0A1V0SKJ1	Klosneuvirus	28.9	1.6e-53
AZH03340.1|3281824_3282949_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
AZH03341.1|3283075_3283699_+	TRAP transporter small permease subunit	NA	NA	NA	NA	NA
AZH03342.1|3283695_3285597_+	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
AZH03343.1|3285645_3286440_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AZH03344.1|3286452_3287454_-	muramoyltetrapeptide carboxypeptidase	NA	NA	NA	NA	NA
AZH03345.1|3287450_3287957_-|tRNA	tRNA adenosine(34) deaminase TadA	tRNA	S4VYT2	Pandoravirus	38.4	3.4e-07
AZH03346.1|3287949_3288798_-	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
AZH03347.1|3288895_3289438_-	hypothetical protein	NA	NA	NA	NA	NA
AZH03348.1|3289481_3290432_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH03349.1|3290587_3290914_-	cation:proton antiporter	NA	NA	NA	NA	NA
AZH03350.1|3290910_3291195_-	K+/H+ antiporter subunit F	NA	NA	NA	NA	NA
AZH03351.1|3291191_3291671_-	Na+/H+ antiporter subunit E	NA	NA	NA	NA	NA
AZH03352.1|3291667_3293296_-	monovalent cation/H+ antiporter subunit D	NA	NA	NA	NA	NA
AZH03353.1|3293292_3293637_-	Na+/H+ antiporter subunit C	NA	NA	NA	NA	NA
AZH03354.1|3293636_3296570_-	monovalent cation/H+ antiporter subunit A	NA	NA	NA	NA	NA
AZH03355.1|3297728_3298679_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 23
CP034101	Bordetella pertussis strain BPD2 chromosome, complete genome	4104911	3483638	3545940	4104911	tRNA,transposase	Salmonella_phage(18.18%)	54	NA	NA
AZH03505.1|3483638_3484589_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH03506.1|3484687_3485458_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.5	8.3e-29
AZH03507.1|3485454_3486126_-	ectoine/hydroxyectoine ABC transporter permease subunit EhuD	NA	NA	NA	NA	NA
AZH03508.1|3486122_3486764_-	ectoine/hydroxyectoine ABC transporter permease subunit EhuC	NA	NA	NA	NA	NA
AZH03509.1|3486776_3487697_-	ectoine/hydroxyectoine ABC transporter substrate-binding protein EhuB	NA	NA	NA	NA	NA
AZH03510.1|3487857_3489018_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZH03511.1|3489059_3490010_-	ornithine cyclodeaminase family protein	NA	NA	NA	NA	NA
AZH03512.1|3490608_3490833_+	hypothetical protein	NA	NA	NA	NA	NA
AZH03513.1|3490997_3492692_-	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA	NA
AZH04156.1|3492813_3493083_-	HPr family phosphocarrier protein	NA	NA	NA	NA	NA
AZH03514.1|3493198_3493597_-	PTS mannose transporter subunit IIA	NA	NA	NA	NA	NA
AZH03515.1|3493607_3494564_-	glutathione synthetase	NA	NA	NA	NA	NA
AZH03516.1|3494700_3495246_-	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	29.9	9.1e-14
AZH03517.1|3495266_3497216_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	36.0	4.1e-125
AZH03518.1|3497603_3498380_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AZH03519.1|3498385_3498778_+	hypothetical protein	NA	NA	NA	NA	NA
AZH03520.1|3499199_3500150_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH03521.1|3500146_3501244_-	sensor domain-containing diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	37.3	3.5e-20
AZH03522.1|3501275_3502226_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH03523.1|3505261_3506035_-	peroxide stress protein YaaA	NA	NA	NA	NA	NA
AZH03524.1|3506061_3507012_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH03525.1|3507110_3507893_-	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA	NA
AZH03526.1|3507981_3509208_-	transporter	NA	NA	NA	NA	NA
AZH03527.1|3509933_3511319_+	alcaligin biosynthesis enzyme	NA	NA	NA	NA	NA
AZH03528.1|3511337_3511943_+	N-acetyltransferase	NA	NA	NA	NA	NA
AZH03529.1|3511939_3513796_+	IucA/IucC family siderophore biosynthesis protein	NA	NA	NA	NA	NA
AZH03530.1|3513792_3514593_+	siderophore ferric iron reductase	NA	NA	NA	NA	NA
AZH03531.1|3514607_3515801_+	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA	NA
AZH03532.1|3515868_3516843_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AZH03533.1|3516965_3518189_+	MFS transporter	NA	S4TR35	Salmonella_phage	29.4	9.8e-24
AZH03534.1|3518299_3520504_+	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
AZH03535.1|3520798_3521458_+	NAAT family transporter	NA	NA	NA	NA	NA
AZH03536.1|3521465_3521672_-	hypothetical protein	NA	NA	NA	NA	NA
AZH03537.1|3522010_3522766_+	GGDEF domain-containing protein	NA	NA	NA	NA	NA
AZH03538.1|3522781_3522943_-	hypothetical protein	NA	NA	NA	NA	NA
AZH03539.1|3523036_3523552_+	hypothetical protein	NA	T1SAR8	Salmonella_phage	42.9	1.1e-05
AZH03540.1|3523824_3524142_+	virulence factor	NA	NA	NA	NA	NA
AZH03541.1|3524329_3524578_-	hypothetical protein	NA	NA	NA	NA	NA
AZH03542.1|3524856_3526212_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	47.5	1.6e-83
AZH03543.1|3526258_3527638_-	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	38.9	1.6e-75
AZH03544.1|3527700_3528333_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
AZH03545.1|3528332_3530693_-	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	48.0	7.6e-81
AZH03546.1|3530734_3531694_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	40.2	3.1e-57
AZH03547.1|3531680_3532367_+	DNA mismatch repair protein MutS	NA	NA	NA	NA	NA
AZH03548.1|3532363_3532696_+	QacE family quaternary ammonium compound efflux SMR transporter	NA	NA	NA	NA	NA
AZH03549.1|3532811_3533762_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH03550.1|3533758_3535825_-	cation acetate symporter	NA	NA	NA	NA	NA
AZH03551.1|3535824_3536097_-	DUF4212 domain-containing protein	NA	NA	NA	NA	NA
AZH03552.1|3536791_3536881_+	K(+)-transporting ATPase subunit F	NA	NA	NA	NA	NA
AZH03553.1|3536880_3538665_+	potassium-transporting ATPase A chain	NA	NA	NA	NA	NA
AZH03554.1|3538688_3540854_+	K(+)-transporting ATPase subunit B	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	27.1	1.2e-24
AZH03555.1|3540864_3541464_+	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA	NA
AZH03556.1|3544285_3544981_+	two-component system response regulator KdpE	NA	NA	NA	NA	NA
AZH03557.1|3544989_3545940_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 24
CP034101	Bordetella pertussis strain BPD2 chromosome, complete genome	4104911	3633106	3674823	4104911	tRNA,transposase	Salmonella_phage(33.33%)	42	NA	NA
AZH03635.1|3633106_3634057_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH03636.1|3634167_3634350_+	hypothetical protein	NA	NA	NA	NA	NA
AZH03637.1|3634449_3635046_-	lipoprotein	NA	NA	NA	NA	NA
AZH03638.1|3635229_3636321_+	hypothetical protein	NA	NA	NA	NA	NA
AZH03639.1|3636820_3637231_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
AZH03640.1|3637289_3637631_-	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	42.2	2.8e-13
AZH03641.1|3637636_3640054_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
AZH03642.1|3640066_3641089_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	38.6	1.0e-26
AZH03643.1|3641163_3641523_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
AZH03644.1|3641538_3641736_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
AZH03645.1|3642071_3643022_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZH03646.1|3643216_3643666_+	dUTP diphosphatase	NA	S4TNT3	Salmonella_phage	67.2	3.7e-45
AZH03647.1|3643662_3644613_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH03648.1|3644723_3646172_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
AZH03649.1|3646286_3646568_-	hypothetical protein	NA	NA	NA	NA	NA
AZH03650.1|3647719_3648670_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH03651.1|3648914_3649628_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AZH03652.1|3649750_3649978_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AZH03653.1|3650272_3650911_-	DedA family protein	NA	NA	NA	NA	NA
AZH03654.1|3650983_3652054_+	metal-dependent hydrolase	NA	NA	NA	NA	NA
AZH03655.1|3652050_3653001_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH03656.1|3653416_3653941_-	DNA-binding protein	NA	J9Q7G7	Salmonella_phage	32.4	1.1e-08
AZH03657.1|3653944_3654214_-	hypothetical protein	NA	NA	NA	NA	NA
AZH03658.1|3654412_3655474_-	LacI family transcriptional regulator	NA	NA	NA	NA	NA
AZH03659.1|3655557_3657192_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.1	2.9e-15
AZH04163.1|3657193_3657997_-	ABC transporter permease	NA	NA	NA	NA	NA
AZH03660.1|3658025_3658985_-	ABC transporter permease	NA	NA	NA	NA	NA
AZH03661.1|3658988_3660503_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZH04164.1|3660539_3661544_-	M20 family peptidase	NA	NA	NA	NA	NA
AZH03662.1|3661975_3662446_-	DUF1801 domain-containing protein	NA	NA	NA	NA	NA
AZH03663.1|3662481_3663093_-	LysE family translocator	NA	NA	NA	NA	NA
AZH03664.1|3663123_3663747_-	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
AZH03665.1|3663827_3665360_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
AZH03666.1|3665394_3666636_-	MFS transporter	NA	NA	NA	NA	NA
AZH03667.1|3666679_3667711_-	alcohol dehydrogenase	NA	A0A2K9L339	Tupanvirus	27.8	1.8e-26
AZH03668.1|3667707_3668877_-	amine oxidase	NA	NA	NA	NA	NA
AZH03669.1|3668870_3669551_-	anti-sigma factor	NA	NA	NA	NA	NA
AZH03670.1|3669712_3670555_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZH03671.1|3670717_3671689_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
AZH03672.1|3671860_3672739_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
AZH03673.1|3672761_3673832_-	FUSC family protein	NA	NA	NA	NA	NA
AZH03674.1|3673872_3674823_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 25
CP034101	Bordetella pertussis strain BPD2 chromosome, complete genome	4104911	3730287	3803157	4104911	transposase,tRNA	Moraxella_phage(16.67%)	59	NA	NA
AZH03717.1|3730287_3730704_-|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
AZH03718.1|3730814_3731447_+	7-carboxy-7-deazaguanine synthase	NA	NA	NA	NA	NA
AZH03719.1|3731475_3731919_+	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
AZH03720.1|3731940_3733032_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZH03721.1|3733086_3733887_-	aldolase	NA	NA	NA	NA	NA
AZH03722.1|3734022_3734643_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AZH03723.1|3734782_3735256_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AZH03724.1|3736395_3737346_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH04167.1|3737342_3745004_-	filamentous hemagglutinin N-terminal domain-containing protein	NA	A0A0R6PJK4	Moraxella_phage	30.9	7.3e-24
AZH03725.1|3745244_3749291_-	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	67.4	6.3e-160
AZH03726.1|3749603_3750185_+	TRAP transporter small permease	NA	NA	NA	NA	NA
AZH03727.1|3750181_3751480_+	TRAP transporter large permease	NA	NA	NA	NA	NA
AZH03728.1|3751559_3752588_+	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
AZH03729.1|3752511_3752862_+	hypothetical protein	NA	NA	NA	NA	NA
AZH03730.1|3752848_3753799_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH03731.1|3753795_3754746_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZH03732.1|3755062_3755668_+	fimbrial protein FimX	NA	NA	NA	NA	NA
AZH03733.1|3755721_3757035_-	phenylacetate--CoA ligase	NA	NA	NA	NA	NA
AZH03734.1|3757109_3757580_-	hydroxyphenylacetyl-CoA thioesterase PaaI	NA	NA	NA	NA	NA
AZH03735.1|3757579_3758368_-	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA	NA
AZH03736.1|3758378_3760031_-	phenylacetic acid degradation protein PaaN	NA	NA	NA	NA	NA
AZH03737.1|3760118_3761069_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH03738.1|3762230_3762737_-	phenylacetate-CoA oxygenase subunit PaaJ	NA	NA	NA	NA	NA
AZH03739.1|3762733_3763498_-	phenylacetate-CoA oxygenase subunit PaaI	NA	NA	NA	NA	NA
AZH03740.1|3763513_3763798_-	1,2-phenylacetyl-CoA epoxidase subunit B	NA	NA	NA	NA	NA
AZH03741.1|3763862_3764852_-	1,2-phenylacetyl-CoA epoxidase subunit A	NA	NA	NA	NA	NA
AZH03742.1|3765023_3765953_+	phenylacetic acid degradation operon negative regulatory protein PaaX	NA	NA	NA	NA	NA
AZH03743.1|3765924_3766611_-	NAD(P)H-hydrate epimerase	NA	NA	NA	NA	NA
AZH03744.1|3766644_3767190_-	oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	37.7	2.1e-26
AZH03745.1|3767234_3768500_+	M48 family peptidase	NA	NA	NA	NA	NA
AZH03746.1|3768496_3769399_+	ribosome biogenesis GTPase	NA	NA	NA	NA	NA
AZH03747.1|3770580_3771525_-	ABC transporter permease	NA	NA	NA	NA	NA
AZH03748.1|3771619_3773137_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZH03749.1|3773178_3774807_-	gamma-glutamyltransferase	NA	NA	NA	NA	NA
AZH03750.1|3774914_3775796_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZH03751.1|3778908_3779283_+	endonuclease	NA	F4YXR7	Roseobacter_phage	54.4	2.1e-25
AZH03752.1|3779307_3779646_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
AZH03753.1|3779689_3781324_-	NAD+ synthase	NA	A0A2L0UZF5	Agrobacterium_phage	36.6	8.3e-87
AZH03754.1|3781362_3782709_-	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
AZH03755.1|3782816_3784238_+	argininosuccinate lyase	NA	NA	NA	NA	NA
AZH03756.1|3784307_3784892_-	nitroreductase	NA	NA	NA	NA	NA
AZH03757.1|3784994_3785945_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH03758.1|3786079_3787186_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZH03759.1|3787196_3788294_+	GTP 3',8-cyclase MoaA	NA	NA	NA	NA	NA
AZH03760.1|3788438_3789644_-	molybdopterin molybdenumtransferase MoeA	NA	NA	NA	NA	NA
AZH03761.1|3789650_3790172_-	molybdenum cofactor biosynthesis protein B	NA	NA	NA	NA	NA
AZH03762.1|3790168_3790660_-	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA	NA
AZH03763.1|3790656_3790908_-	MoaD/ThiS family protein	NA	NA	NA	NA	NA
AZH03764.1|3790888_3791374_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA	NA
AZH03765.1|3791509_3794971_+	DUF748 domain-containing protein	NA	NA	NA	NA	NA
AZH03766.1|3794967_3795873_+	dienelactone hydrolase family protein	NA	NA	NA	NA	NA
AZH03767.1|3795882_3796314_-	lipoprotein	NA	NA	NA	NA	NA
AZH03768.1|3796560_3797064_+	peroxiredoxin	NA	M1I839	Pelagibacter_phage	44.1	1.8e-24
AZH03769.1|3797075_3798542_+	MFS transporter	NA	NA	NA	NA	NA
AZH03770.1|3798616_3799492_-	EamA/RhaT family transporter	NA	NA	NA	NA	NA
AZH03771.1|3799488_3800496_-	biotin synthase	NA	NA	NA	NA	NA
AZH03772.1|3800963_3801269_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
AZH03773.1|3801359_3801950_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZH04168.1|3802140_3803157_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 26
CP034101	Bordetella pertussis strain BPD2 chromosome, complete genome	4104911	3806300	3873100	4104911	protease,transposase	uncultured_Mediterranean_phage(28.57%)	49	NA	NA
AZH03776.1|3806300_3807251_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZH03777.1|3807349_3808300_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH03778.1|3808296_3809091_-	N-formylglutamate deformylase	NA	NA	NA	NA	NA
AZH03779.1|3809122_3809827_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
AZH03780.1|3809901_3810702_-	SURF1 family protein	NA	NA	NA	NA	NA
AZH03781.1|3810698_3811106_-	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
AZH03782.1|3811102_3811744_-	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
AZH03783.1|3811736_3813758_-	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
AZH03784.1|3814997_3816329_+	MFS transporter	NA	NA	NA	NA	NA
AZH03785.1|3816325_3817276_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH03786.1|3818982_3819249_-	accessory factor UbiK family protein	NA	NA	NA	NA	NA
AZH03787.1|3819956_3820295_+	P-II family nitrogen regulator	NA	NA	NA	NA	NA
AZH03788.1|3824837_3825440_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZH03789.1|3825536_3826826_+	MFS transporter	NA	NA	NA	NA	NA
AZH03790.1|3826883_3827615_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.4e-12
AZH03791.1|3827611_3828415_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	7.9e-14
AZH03792.1|3828411_3829500_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
AZH03793.1|3829496_3830426_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZH03794.1|3830574_3831720_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZH03795.1|3831741_3832692_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH03796.1|3833022_3836844_-	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
AZH03797.1|3837000_3837669_-	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
AZH03798.1|3837673_3839347_-	MCE family protein	NA	NA	NA	NA	NA
AZH03799.1|3839365_3840685_-	PqiA/YebS family transporter subunit	NA	NA	NA	NA	NA
AZH03800.1|3840689_3843041_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.2e-164
AZH03801.1|3843060_3845229_-	penicillin-binding protein 1C	NA	NA	NA	NA	NA
AZH03802.1|3845225_3850415_-	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
AZH03803.1|3850504_3850819_-|protease	ATP-dependent Clp protease adaptor ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
AZH03804.1|3851046_3851292_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
AZH03805.1|3851386_3851905_+	DUF192 domain-containing protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	5.1e-14
AZH03806.1|3852004_3853210_-	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
AZH03807.1|3853325_3854723_-	chloride channel protein	NA	NA	NA	NA	NA
AZH03808.1|3854839_3855418_-	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
AZH03809.1|3855490_3856882_-	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	32.0	1.4e-29
AZH03810.1|3857049_3858000_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH03811.1|3858280_3858901_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
AZH03812.1|3858897_3859311_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
AZH03813.1|3859307_3860351_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
AZH03814.1|3860406_3860595_+	Trm112 family protein	NA	NA	NA	NA	NA
AZH03815.1|3860604_3861369_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
AZH03816.1|3861459_3862116_+	adenylate kinase	NA	NA	NA	NA	NA
AZH03817.1|3862207_3862966_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZH03818.1|3862991_3864593_+	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
AZH03819.1|3864793_3865798_+	DUF4880 domain-containing protein	NA	NA	NA	NA	NA
AZH03820.1|3865898_3866162_+	30S ribosomal protein S20	NA	NA	NA	NA	NA
AZH03821.1|3866279_3867056_-	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
AZH03822.1|3867646_3868597_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH03823.1|3870980_3872093_-	Ldh family oxidoreductase	NA	NA	NA	NA	NA
AZH03824.1|3872149_3873100_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 27
CP034101	Bordetella pertussis strain BPD2 chromosome, complete genome	4104911	3903486	3942675	4104911	transposase	Planktothrix_phage(50.0%)	38	NA	NA
AZH03854.1|3903486_3904437_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH03855.1|3904423_3904669_-	hypothetical protein	NA	NA	NA	NA	NA
AZH03856.1|3904557_3905454_-	inositol monophosphatase	NA	NA	NA	NA	NA
AZH03857.1|3907731_3909957_+	glycoside hydrolase family 31 protein	NA	NA	NA	NA	NA
AZH03858.1|3910121_3911210_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
AZH03859.1|3911166_3911820_+	ABC transporter permease	NA	NA	NA	NA	NA
AZH03860.1|3911867_3912665_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZH03861.1|3913196_3914147_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH03862.1|3914227_3915376_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
AZH03863.1|3915432_3916383_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH03864.1|3916369_3916588_-	hypothetical protein	NA	NA	NA	NA	NA
AZH03865.1|3916481_3916787_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
AZH03866.1|3916815_3917250_-	DUF126 domain-containing protein	NA	NA	NA	NA	NA
AZH03867.1|3917251_3918496_-	DUF521 domain-containing protein	NA	NA	NA	NA	NA
AZH03868.1|3918492_3919203_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
AZH04169.1|3919217_3920129_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZH03869.1|3920491_3920896_+	hypothetical protein	NA	NA	NA	NA	NA
AZH03870.1|3920892_3921351_+	hypothetical protein	NA	NA	NA	NA	NA
AZH03871.1|3921357_3922266_+	hypothetical protein	NA	NA	NA	NA	NA
AZH03872.1|3922262_3923129_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
AZH03873.1|3923115_3923943_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
AZH03874.1|3923953_3925081_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-23
AZH03875.1|3926158_3927397_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZH03876.1|3927438_3928701_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
AZH03877.1|3928707_3929460_+	DNA-binding protein	NA	NA	NA	NA	NA
AZH03878.1|3929511_3929697_-	hypothetical protein	NA	NA	NA	NA	NA
AZH04170.1|3929972_3930437_+	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
AZH03879.1|3930468_3931128_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
AZH03880.1|3931272_3933381_+	AsmA family protein	NA	NA	NA	NA	NA
AZH03881.1|3933377_3934328_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZH03882.1|3934431_3935052_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZH03883.1|3935155_3935896_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
AZH03884.1|3937030_3938155_-	hypothetical protein	NA	NA	NA	NA	NA
AZH03885.1|3938200_3938569_-	hypothetical protein	NA	NA	NA	NA	NA
AZH03886.1|3938810_3939761_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZH04171.1|3940796_3941339_-	hypothetical protein	NA	NA	NA	NA	NA
AZH03887.1|3941531_3941738_+	hypothetical protein	NA	NA	NA	NA	NA
AZH03888.1|3941724_3942675_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
