assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003855555.1_ASM385555v1	CP034077	Klebsiella pneumoniae strain KP17-16 chromosome, complete genome	1	2284088-2284666	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2	cas3,RT,csa3,DEDDh,DinG,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2,WYL	Type I-E	GTCTTCCCCACACGCGTGGGGGTGTTTC,GTCTTCCCCACACGCGTGGGGGTGTTTCT,GTCTTCCCCACACGCGTGGGGGTGTTTC	28,29,28	0	0	NA	NA	I-E,II-B:I-E,II-B:I-E,II-B	6,9,9	9	TypeI-E	cas3,RT,csa3,DEDDh,DinG,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2,WYL	NA|79aa|up_3|CP034077.1_2279585_2279822_+,NA|60aa|down_0|CP034077.1_2284843_2285023_+	NA|411aa|up_9|CP034077.1_2271018_2272251_-	PRK15403, PRK15403, multidrug efflux MFS transporter MdtM	NA|145aa|up_8|CP034077.1_2272816_2273251_-	cd07262, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|400aa|up_7|CP034077.1_2273366_2274566_-	cd17477, MFS_YcaD_like, YcaD and similar transporters of the Major Facilitator Superfamily	NA|386aa|up_6|CP034077.1_2274861_2276019_+	cd05666, M20_Acy1-like, M20 Peptidase aminoacylase 1 subfamily	NA|717aa|up_5|CP034077.1_2276061_2278212_-	TIGR01591, Formate_dehydrogenase_subunit_alpha, formate dehydrogenase, alpha subunit, archaeal-type	NA|360aa|up_4|CP034077.1_2278458_2279538_-	PRK10098, PRK10098, putative dehydrogenase; Provisional	NA|79aa|up_3|CP034077.1_2279585_2279822_+	NA	NA|363aa|up_2|CP034077.1_2279840_2280929_+	COG1840, AfuA, ABC-type Fe3+ transport system, periplasmic component [Inorganic ion transport and metabolism]	NA|590aa|up_1|CP034077.1_2281002_2282772_+	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]	NA|357aa|up_0|CP034077.1_2282764_2283835_+	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]	NA|60aa|down_0|CP034077.1_2284843_2285023_+	NA	cas3|872aa|down_1|CP034077.1_2285077_2287693_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|508aa|down_2|CP034077.1_2287696_2289220_+	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cse2gr11|189aa|down_3|CP034077.1_2289231_2289798_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas6e|216aa|down_4|CP034077.1_2289790_2290438_+	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas7|345aa|down_5|CP034077.1_2290467_2291502_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|232aa|down_6|CP034077.1_2291535_2292231_+	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas1|292aa|down_7|CP034077.1_2292230_2293106_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|96aa|down_8|CP034077.1_2293083_2293371_+	cd09648, Cas2_I-E, CRISPR/Cas system-associated protein Cas2	NA|372aa|down_9|CP034077.1_2294361_2295477_+	PHA02053, PHA02053, hypothetical protein
GCA_003855555.1_ASM385555v1	CP034077	Klebsiella pneumoniae strain KP17-16 chromosome, complete genome	2	2293419-2294126	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2	cas3,RT,csa3,DEDDh,DinG,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2,WYL	Type I-E	GTCTTCCCCACGCACGTGGGGGTGTTTC,GTCTTCCCCACGCACGTGGGGGTGTTTCT,GTCTTCCCCACGCACGTGGGGGTGTTTCT	28,29,29	0	0	NA	NA	I-B,III-A,III-B:I-B,III-A,III-B:I-B,III-A,III-B	10,11,11	11	TypeI-E	cas3,RT,csa3,DEDDh,DinG,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2,WYL	NA|60aa|up_8|CP034077.1_2284843_2285023_+,NA	NA|357aa|up_9|CP034077.1_2282764_2283835_+	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]	NA|60aa|up_8|CP034077.1_2284843_2285023_+	NA	cas3|872aa|up_7|CP034077.1_2285077_2287693_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|508aa|up_6|CP034077.1_2287696_2289220_+	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cse2gr11|189aa|up_5|CP034077.1_2289231_2289798_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas6e|216aa|up_4|CP034077.1_2289790_2290438_+	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas7|345aa|up_3|CP034077.1_2290467_2291502_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|232aa|up_2|CP034077.1_2291535_2292231_+	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas1|292aa|up_1|CP034077.1_2292230_2293106_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|96aa|up_0|CP034077.1_2293083_2293371_+	cd09648, Cas2_I-E, CRISPR/Cas system-associated protein Cas2	NA|372aa|down_0|CP034077.1_2294361_2295477_+	PHA02053, PHA02053, hypothetical protein	NA|228aa|down_1|CP034077.1_2295487_2296171_+	pfam16277, DUF4926, Domain of unknown function (DUF4926)	NA|124aa|down_2|CP034077.1_2296231_2296603_-	cd07262, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|251aa|down_3|CP034077.1_2297107_2297860_+	pfam13618, Gluconate_2-dh3, Gluconate 2-dehydrogenase subunit 3	NA|595aa|down_4|CP034077.1_2297862_2299647_+	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism]	NA|446aa|down_5|CP034077.1_2299660_2300998_+	pfam00034, Cytochrom_C, Cytochrome c	NA|208aa|down_6|CP034077.1_2301081_2301705_+	PRK13538, PRK13538, cytochrome c biogenesis heme-transporting ATPase CcmA	NA|220aa|down_7|CP034077.1_2301701_2302361_+	TIGR01190, Heme_exporter_protein_B, heme exporter protein CcmB	NA|246aa|down_8|CP034077.1_2302410_2303148_+	TIGR01191, Heme_exporter_protein_C, heme exporter protein CcmC	NA|77aa|down_9|CP034077.1_2303144_2303375_+	COG3114, CcmD, Heme exporter protein D [Intracellular trafficking and secretion]
GCA_003855555.1_ASM385555v1	CP034077	Klebsiella pneumoniae strain KP17-16 chromosome, complete genome	3	4324226-4324354	3	CRISPRCasFinder	no	DEDDh	cas3,RT,csa3,DEDDh,DinG,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2,WYL	Unclear	TGCCGGGTGGCAGCTGGCGCCTTACCCGGCCTACAAAAC	39	0	0	NA	NA	NA	1	1	Orphan	cas3,RT,csa3,DEDDh,DinG,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2,WYL	NA,NA|70aa|down_7|CP034077.1_4330409_4330619_+	NA|428aa|up_9|CP034077.1_4313974_4315258_+	PRK08088, PRK08088, 4-aminobutyrate--2-oxoglutarate transaminase	NA|467aa|up_8|CP034077.1_4315393_4316794_+	PRK10197, PRK10197, GABA permease	NA|231aa|up_7|CP034077.1_4316839_4317532_+	PRK11534, PRK11534, DNA-binding transcriptional regulator CsiR; Provisional	NA|133aa|up_6|CP034077.1_4317617_4318016_-	PRK10984, PRK10984, sigma factor-binding protein Crl	NA|415aa|up_5|CP034077.1_4318073_4319318_-	PRK05077, frsA, esterase FrsA	NA|153aa|up_4|CP034077.1_4319423_4319882_-	PRK09177, PRK09177, xanthine-guanine phosphoribosyltransferase; Validated	NA|486aa|up_3|CP034077.1_4320139_4321597_+	PRK15026, PRK15026, aminoacyl-histidine dipeptidase; Provisional	NA|151aa|up_2|CP034077.1_4321639_4322092_-	PRK09831, PRK09831, GNAT family N-acetyltransferase	NA|352aa|up_1|CP034077.1_4322094_4323150_-	PRK02406, PRK02406, DNA polymerase IV; Validated	NA|287aa|up_0|CP034077.1_4323309_4324170_+	cd08580, GDPD_Rv2277c_like, Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial protein Rv2277c and similar proteins	NA|72aa|down_0|CP034077.1_4324392_4324608_-	COG2991, COG2991, Uncharacterized protein conserved in bacteria [Function unknown]	NA|408aa|down_1|CP034077.1_4324610_4325834_-	PRK05464, PRK05464, Na(+)-translocating NADH-quinone reductase subunit F; Provisional	NA|199aa|down_2|CP034077.1_4325846_4326443_-	PRK02830, PRK02830, Na(+)-translocating NADH-quinone reductase subunit E; Provisional	NA|213aa|down_3|CP034077.1_4326449_4327088_-	PRK09292, PRK09292, Na(+)-translocating NADH-quinone reductase subunit D; Validated	NA|265aa|down_4|CP034077.1_4327080_4327875_-	PRK05346, PRK05346, Na(+)-translocating NADH-quinone reductase subunit C; Provisional	NA|413aa|down_5|CP034077.1_4327867_4329106_-	PRK05349, PRK05349, Na(+)-translocating NADH-quinone reductase subunit B; Provisional	NA|448aa|down_6|CP034077.1_4329109_4330453_-	PRK05352, PRK05352, Na(+)-translocating NADH-quinone reductase subunit A; Provisional	NA|70aa|down_7|CP034077.1_4330409_4330619_+	NA	NA|247aa|down_8|CP034077.1_4330864_4331605_+	COG3034, COG3034, Uncharacterized protein conserved in bacteria [Function unknown]	NA|256aa|down_9|CP034077.1_4331575_4332343_-	pfam13230, GATase_4, Glutamine amidotransferases class-II
