assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003852025.1_ASM385202v1	CP027758	Pseudomonas synxantha strain R2-54-08W chromosome, complete genome	1	120378-120488	1	CRISPRCasFinder	no		DEDDh,DinG,csa3,cas3,WYL	Orphan	TGTAGCTTAGTTGGTTAGAGCGCACCCC	28	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,csa3,cas3,WYL	NA,NA|113aa|down_8|CP027758.1_136138_136477_-	NA|103aa|up_9|CP027758.1_108086_108395_-	TIGR02448, conserved_hypothetical_protein, conserverd hypothetical protein	NA|107aa|up_8|CP027758.1_108501_108822_-	TIGR02448, conserved_hypothetical_protein, conserverd hypothetical protein	NA|72aa|up_7|CP027758.1_109150_109366_-	COG5457, COG5457, Uncharacterized conserved small protein [Function unknown]	NA|498aa|up_6|CP027758.1_109684_111178_-	TIGR03458, Propionyl-CoA:succinate_CoA_transferase, succinate CoA transferase	NA|479aa|up_5|CP027758.1_111357_112794_-	COG1282, PntB, NAD/NADP transhydrogenase beta subunit [Energy production and conversion]	NA|108aa|up_4|CP027758.1_112793_113117_-	pfam12769, PNTB_4TM, 4TM region of pyridine nucleotide transhydrogenase, mitoch	NA|374aa|up_3|CP027758.1_113132_114254_-	cd05304, Rubrum_tdh, Rubrum transdehydrogenase NAD-binding and catalytic domains	NA|300aa|up_2|CP027758.1_114706_115606_-	cd08481, PBP2_GcdR_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators GcdR-like, contains the type 2 periplasmic binding fold	NA|394aa|up_1|CP027758.1_115763_116945_+	cd01151, GCD, Glutaryl-CoA dehydrogenase	NA|407aa|up_0|CP027758.1_116958_118179_+	COG1804, CaiB, Predicted acyl-CoA transferases/carnitine dehydratase [Energy production and conversion]	NA|627aa|down_0|CP027758.1_124546_126427_+	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|153aa|down_1|CP027758.1_126466_126925_-	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|1126aa|down_2|CP027758.1_126944_130322_-	cd05930, A_NRPS, The adenylation domain of nonribosomal peptide synthetases (NRPS)	NA|316aa|down_3|CP027758.1_130318_131266_-	pfam11583, AurF, P-aminobenzoate N-oxygenase AurF	NA|253aa|down_4|CP027758.1_131262_132021_-	pfam11251, DUF3050, Protein of unknown function (DUF3050)	NA|237aa|down_5|CP027758.1_132386_133097_-	COG1802, GntR, Transcriptional regulators [Transcription]	NA|208aa|down_6|CP027758.1_133416_134040_+	COG3672, COG3672, Predicted transglutaminase-like cysteine proteinase [General    function prediction only]	NA|651aa|down_7|CP027758.1_134054_136007_+	cd01948, EAL, EAL domain	NA|113aa|down_8|CP027758.1_136138_136477_-	NA	NA|5688aa|down_9|CP027758.1_136628_153692_-	cd00198, vWFA, Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF)
GCA_003852025.1_ASM385202v1	CP027758	Pseudomonas synxantha strain R2-54-08W chromosome, complete genome	2	2216012-2216122	2	CRISPRCasFinder	no		DEDDh,DinG,csa3,cas3,WYL	Orphan	TGTAGCTTAGTTGGTTAGAGCGCACCCC	28	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,csa3,cas3,WYL	NA|90aa|up_6|CP027758.1_2207390_2207660_+,NA|94aa|up_1|CP027758.1_2212419_2212701_-,NA	NA|152aa|up_9|CP027758.1_2205126_2205582_-	cd01110, HTH_SoxR, Helix-Turn-Helix DNA binding domain of the SoxR transcription regulator	NA|122aa|up_8|CP027758.1_2205683_2206049_+	pfam03992, ABM, Antibiotic biosynthesis monooxygenase	NA|368aa|up_7|CP027758.1_2206037_2207141_-	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|90aa|up_6|CP027758.1_2207390_2207660_+	NA	NA|387aa|up_5|CP027758.1_2207894_2209055_+	PRK14012, PRK14012, IscS subfamily cysteine desulfurase	NA|603aa|up_4|CP027758.1_2209104_2210913_+	cd01085, APP, X-Prolyl Aminopeptidase 2	NA|197aa|up_3|CP027758.1_2210950_2211541_-	cd03022, DsbA_HCCA_Iso, DsbA family, 2-hydroxychromene-2-carboxylate (HCCA) isomerase subfamily; HCCA isomerase is a glutathione (GSH) dependent enzyme involved in the naphthalene catabolic pathway	NA|244aa|up_2|CP027758.1_2211576_2212308_-	cd05373, SDR_c10, classical (c) SDR, subgroup  10	NA|94aa|up_1|CP027758.1_2212419_2212701_-	NA	NA|296aa|up_0|CP027758.1_2212862_2213750_-	PRK10532, PRK10532, threonine and homoserine efflux system; Provisional	NA|631aa|down_0|CP027758.1_2219908_2221801_+	TIGR03423, pbp2_mrdA, penicillin-binding protein 2	NA|125aa|down_1|CP027758.1_2221802_2222177_-	COG3791, COG3791, Uncharacterized conserved protein [Function unknown]	NA|156aa|down_2|CP027758.1_2222303_2222771_+	cd08898, SRPBCC_CalC_Aha1-like_5, Putative hydrophobic ligand-binding SRPBCC domain of an uncharacterized subgroup of CalC- and Aha1-like proteins	NA|740aa|down_3|CP027758.1_2222813_2225033_-	TIGR01783, Ferrienterobactin_receptor, TonB-dependent siderophore receptor	NA|786aa|down_4|CP027758.1_2225251_2227609_+	PRK05762, PRK05762, DNA polymerase II; Reviewed	NA|211aa|down_5|CP027758.1_2227682_2228315_+	cd03057, GST_N_Beta, GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress	NA|193aa|down_6|CP027758.1_2228468_2229047_+	pfam13778, DUF4174, Domain of unknown function (DUF4174)	NA|471aa|down_7|CP027758.1_2229101_2230514_-	COG0728, MviN, Uncharacterized membrane protein, putative virulence factor [General function prediction only]	NA|274aa|down_8|CP027758.1_2230513_2231335_-	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins	NA|468aa|down_9|CP027758.1_2231331_2232735_-	TIGR00947, 2A73, putative bicarbonate transporter, IctB family
GCA_003852025.1_ASM385202v1	CP027758	Pseudomonas synxantha strain R2-54-08W chromosome, complete genome	3	2818311-2818414	3	CRISPRCasFinder	no		DEDDh,DinG,csa3,cas3,WYL	Orphan	ATGTGGGAGGGGGCTTGCCCCCGATGGCGGCCT	33	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,csa3,cas3,WYL	NA|68aa|up_8|CP027758.1_2811843_2812047_+,NA|77aa|up_6|CP027758.1_2812360_2812591_-,NA|92aa|up_5|CP027758.1_2812701_2812977_-,NA|157aa|up_4|CP027758.1_2813345_2813816_+,NA|110aa|down_8|CP027758.1_2831197_2831527_+	NA|135aa|up_9|CP027758.1_2811239_2811644_+	TIGR02420, RNA_polymerase-binding_transcription_factor_DksA, RNA polymerase-binding protein DksA	NA|68aa|up_8|CP027758.1_2811843_2812047_+	NA	NA|81aa|up_7|CP027758.1_2812048_2812291_-	pfam10982, DUF2789, Protein of unknown function (DUF2789)	NA|77aa|up_6|CP027758.1_2812360_2812591_-	NA	NA|92aa|up_5|CP027758.1_2812701_2812977_-	NA	NA|157aa|up_4|CP027758.1_2813345_2813816_+	NA	NA|336aa|up_3|CP027758.1_2813946_2814954_+	cd13641, PBP2_HisX_like, Substrate-binding domain of ABC-type histidine transporter involves in betaine and proline uptake; the type 2 periplasmic-binding protein fold	NA|709aa|up_2|CP027758.1_2815075_2817202_-	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|130aa|up_1|CP027758.1_2817296_2817686_-	pfam11162, DUF2946, Protein of unknown function (DUF2946)	NA|146aa|up_0|CP027758.1_2817779_2818217_+	pfam13160, DUF3995, Protein of unknown function (DUF3995)	NA|389aa|down_0|CP027758.1_2818997_2820164_+	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|1059aa|down_1|CP027758.1_2820160_2823337_+	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|484aa|down_2|CP027758.1_2823333_2824785_+	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family	NA|332aa|down_3|CP027758.1_2825046_2826042_+	pfam14515, HOASN, Haem-oxygenase-associated N-terminal helices	NA|329aa|down_4|CP027758.1_2826082_2827069_+	pfam14518, Haem_oxygenas_2, Iron-containing redox enzyme	NA|473aa|down_5|CP027758.1_2827099_2828518_+	cd01597, pCLME, prokaryotic 3-carboxy-cis,cis-muconate cycloisomerase (CMLE)_like	NA|483aa|down_6|CP027758.1_2828517_2829966_+	cd01597, pCLME, prokaryotic 3-carboxy-cis,cis-muconate cycloisomerase (CMLE)_like	NA|358aa|down_7|CP027758.1_2830003_2831077_+	pfam13847, Methyltransf_31, Methyltransferase domain	NA|110aa|down_8|CP027758.1_2831197_2831527_+	NA	NA|149aa|down_9|CP027758.1_2831616_2832063_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family
GCA_003852025.1_ASM385202v1	CP027758	Pseudomonas synxantha strain R2-54-08W chromosome, complete genome	4	5066613-5066712	4	CRISPRCasFinder	no		DEDDh,DinG,csa3,cas3,WYL	Orphan	CAGGCCGCCATCGGGAGCAAGCCCCCTC	28	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,csa3,cas3,WYL	NA|76aa|up_6|CP027758.1_5059576_5059804_-,NA|318aa|down_8|CP027758.1_5075466_5076420_+	NA|480aa|up_9|CP027758.1_5055768_5057208_+	COG3488, COG3488, Predicted thiol oxidoreductase [Energy production and conversion]	NA|355aa|up_8|CP027758.1_5057239_5058304_+	COG3489, COG3489, Predicted periplasmic lipoprotein [General function prediction only]	NA|367aa|up_7|CP027758.1_5058303_5059404_+	COG3490, COG3490, Uncharacterized protein conserved in bacteria [Function unknown]	NA|76aa|up_6|CP027758.1_5059576_5059804_-	NA	NA|240aa|up_5|CP027758.1_5059800_5060520_-	PRK09902, PRK09902, lipopolysaccharide kinase InaA	NA|227aa|up_4|CP027758.1_5060524_5061205_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|427aa|up_3|CP027758.1_5061393_5062674_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|228aa|up_2|CP027758.1_5062663_5063347_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|650aa|up_1|CP027758.1_5063547_5065497_+	cd16015, LTA_synthase, Lipoteichoic acid synthase like	NA|242aa|up_0|CP027758.1_5065547_5066273_+	COG3907, COG3907, PAP2 (acid phosphatase) superfamily protein [General function prediction only]	NA|549aa|down_0|CP027758.1_5066820_5068467_-	PRK00013, groEL, chaperonin GroEL; Reviewed	NA|98aa|down_1|CP027758.1_5068516_5068810_-	PRK00364, groES, co-chaperonin GroES; Reviewed	NA|159aa|down_2|CP027758.1_5069057_5069534_-	PRK11463, fxsA, phage T7 F exclusion suppressor FxsA; Reviewed	NA|244aa|down_3|CP027758.1_5069600_5070332_-	COG0748, HugZ, Putative heme iron utilization protein [Inorganic ion transport and metabolism]	NA|336aa|down_4|CP027758.1_5070435_5071443_-	pfam04338, DUF481, Protein of unknown function, DUF481	NA|118aa|down_5|CP027758.1_5071600_5071954_+	COG3695, COG3695, Predicted methylated DNA-protein cysteine methyltransferase [DNA replication, recombination, and repair]	NA|511aa|down_6|CP027758.1_5071997_5073530_+	cd17486, MFS_AmpG_like, AmpG and similar transporters of the Major Facilitator Superfamily	NA|572aa|down_7|CP027758.1_5073730_5075446_+	PRK09194, PRK09194, prolyl-tRNA synthetase; Provisional	NA|318aa|down_8|CP027758.1_5075466_5076420_+	NA	NA|366aa|down_9|CP027758.1_5076549_5077647_-	PRK02406, PRK02406, DNA polymerase IV; Validated
