The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP027758	Pseudomonas synxantha strain R2-54-08W chromosome, complete genome	6277070	1349947	1391397	6277070	tail,tRNA,plate	uncultured_Caudovirales_phage(27.27%)	50	NA	NA
AZE76985.1|1349947_1350418_+|tRNA	Cys-tRNA(Pro) deacylase YbaK	tRNA	NA	NA	NA	NA
AZE76986.1|1350498_1351542_-	Ferric iron ABC transporter, ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	36.3	8.6e-21
AZE76987.1|1351538_1352462_-	Ornithine carbamoyltransferase	NA	A0A1J0F9B8	Only_Syngen_Nebraska_virus	27.7	3.2e-19
AZE76988.1|1352894_1355003_+	Formate dehydrogenase-O, major subunit	NA	NA	NA	NA	NA
AZE76989.1|1355089_1355428_+	Glutaredoxin-related protein	NA	NA	NA	NA	NA
AZE76990.1|1355490_1355961_-	Bacterioferritin	NA	NA	NA	NA	NA
AZE76991.1|1356161_1356380_-	Bacterioferritin-associated ferredoxin	NA	NA	NA	NA	NA
AZE76992.1|1356623_1357226_+	Alkyl hydroperoxide reductase subunit C-like protein	NA	NA	NA	NA	NA
AZE76993.1|1357293_1357965_-	Ribonuclease T	NA	NA	NA	NA	NA
AZE76994.1|1357961_1359008_-	Dihydroorotase	NA	NA	NA	NA	NA
AZE76995.1|1359164_1360073_+	outer membrane protein, OmpA family	NA	NA	NA	NA	NA
AZE76996.1|1360202_1361420_+	Argininosuccinate synthase	NA	NA	NA	NA	NA
AZE76997.1|1362047_1362680_+	Two-component transcriptional response regulator, LuxR family	NA	NA	NA	NA	NA
AZE76998.1|1362763_1362946_-	hypothetical protein	NA	NA	NA	NA	NA
AZE76999.1|1363053_1363692_-	Endonuclease III	NA	NA	NA	NA	NA
AZE77000.1|1363800_1364970_-	Electron transport complex protein RnfB	NA	NA	NA	NA	NA
AZE77001.1|1365057_1367109_-|tRNA	Methionyl-tRNA synthetase	tRNA	NA	NA	NA	NA
AZE77002.1|1367281_1368376_+	[4Fe-4S] cluster assembly scaffold protein Mrp (ApbC)	NA	NA	NA	NA	NA
AZE77003.1|1368870_1369194_-	4Fe-4S dicluster domain	NA	NA	NA	NA	NA
AZE77004.1|1369336_1371985_-	DNA mismatch repair protein MutS	NA	A0A1V0SJ67	Klosneuvirus	21.9	8.9e-30
AZE77005.1|1372141_1372417_-	hypothetical protein	NA	NA	NA	NA	NA
AZE77006.1|1373092_1373770_-	hypothetical protein	NA	NA	NA	NA	NA
AZE77007.1|1373854_1374226_-	hypothetical protein	NA	NA	NA	NA	NA
AZE77008.1|1374218_1374707_-	GepA protein	NA	D0UIM3	Aggregatibacter_phage	44.5	2.2e-27
AZE77009.1|1374950_1375685_+	Transcriptional regulator	NA	B5TK58	Pseudomonas_phage	87.7	4.8e-119
AZE77010.1|1375871_1375991_+	hypothetical protein	NA	NA	NA	NA	NA
AZE77011.1|1376274_1376619_+	Holin	NA	B5TK61	Pseudomonas_phage	80.2	1.7e-45
AZE77012.1|1376897_1377413_+	Putidacin L1	NA	NA	NA	NA	NA
AZE77013.1|1377565_1378078_+	hypothetical protein	NA	NA	NA	NA	NA
AZE77014.1|1378081_1378693_+|plate	Baseplate assembly protein V	plate	A0A2H4JBW8	uncultured_Caudovirales_phage	53.3	3.8e-45
AZE77015.1|1378702_1379035_+|plate	Baseplate assembly protein W	plate	A0A2H4JI46	uncultured_Caudovirales_phage	65.5	9.7e-35
AZE77016.1|1379031_1380027_+|plate	Phage-related baseplate assembly protein	plate	A0A2H4JC04	uncultured_Caudovirales_phage	64.4	1.2e-112
AZE77017.1|1380023_1380662_+	Tail protein I	NA	A0A2H4JDK0	uncultured_Caudovirales_phage	51.9	4.8e-38
AZE77018.1|1380658_1381189_+|tail	Phage tail fiber protein	tail	B0ZSG1	Halomonas_phage	57.5	8.5e-49
AZE77019.1|1381236_1382019_+	hypothetical protein	NA	NA	NA	NA	NA
AZE77020.1|1382030_1382333_+	hypothetical protein	NA	Q8H9M8	Vibrio_phage	54.0	4.9e-09
AZE77021.1|1382420_1382594_+	hypothetical protein	NA	NA	NA	NA	NA
AZE77022.1|1382596_1382686_+|tail	Major tail sheath protein	tail	NA	NA	NA	NA
AZE77023.1|1382661_1383762_+|tail	Major tail sheath protein	tail	B0ZSG8	Halomonas_phage	58.7	4.3e-119
AZE77024.1|1383761_1384268_+	hypothetical protein	NA	Q6R4W3	Vibrio_virus	34.5	3.8e-22
AZE77025.1|1384451_1385024_+	hypothetical protein	NA	B0ZSH0	Halomonas_phage	40.1	1.6e-29
AZE77026.1|1385032_1385146_+	hypothetical protein	NA	NA	NA	NA	NA
AZE77027.1|1385151_1386972_+|tail	Phage tail length tape-measure protein	tail	NA	NA	NA	NA
AZE77028.1|1386971_1387355_+	Phage protein	NA	B0ZSH2	Halomonas_phage	59.8	3.5e-36
AZE77029.1|1387347_1387560_+|tail	P2-like prophage tail protein X	tail	A0A2H4JGD9	uncultured_Caudovirales_phage	62.9	2.4e-18
AZE77030.1|1387569_1388580_+|tail	Phage tail protein D	tail	A0A2H4JH05	uncultured_Caudovirales_phage	55.4	2.4e-100
AZE77031.1|1388647_1389205_+	Lytic enzyme	NA	B5TK83	Pseudomonas_phage	78.1	7.5e-80
AZE77032.1|1389192_1389672_+	hypothetical protein	NA	B5TK84	Pseudomonas_phage	56.9	1.4e-37
AZE77033.1|1389754_1390255_+	Nicotinamide-nucleotide amidase	NA	B5TK85	Pseudomonas_phage	79.5	4.5e-68
AZE77034.1|1390338_1391397_+	RecA protein	NA	A0A0S2MVG1	Bacillus_phage	62.4	2.4e-111
>prophage 2
CP027758	Pseudomonas synxantha strain R2-54-08W chromosome, complete genome	6277070	1497030	1501992	6277070		uncultured_Mediterranean_phage(33.33%)	6	NA	NA
AZE77136.1|1497030_1497780_+	5'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	49.8	6.6e-63
AZE77137.1|1497779_1498457_+	Protein-L-isoaspartate O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	53.1	3.1e-43
AZE77138.1|1498666_1499503_+	Murein hydrolase activator NlpD	NA	A0A0S2SXL7	Bacillus_phage	33.3	8.2e-06
AZE77139.1|1499608_1500616_+	RNA polymerase sigma factor RpoS	NA	G8CLC7	Synechococcus_phage	36.2	1.3e-34
AZE77140.1|1500828_1501038_-	Cold shock protein of CSP family	NA	Q9AZD3	Lactococcus_phage	66.7	2.2e-16
AZE77141.1|1501425_1501992_+	Deoxycytidine triphosphate deaminase	NA	S5VM63	Pseudomonas_phage	73.3	3.7e-74
>prophage 3
CP027758	Pseudomonas synxantha strain R2-54-08W chromosome, complete genome	6277070	3129837	3179503	6277070	integrase,protease	Streptomyces_phage(16.67%)	41	3178431:3178454	3179528:3179551
AZE78575.1|3129837_3131151_+|protease	ABC-type protease exporter, membrane fusion protein family component PrtE/AprE	protease	NA	NA	NA	NA
AZE78576.1|3131153_3132488_+|protease	ABC-type protease exporter, outer membrane component PrtF/AprF	protease	NA	NA	NA	NA
AZE78577.1|3132519_3135477_+|protease	Serine protease	protease	NA	NA	NA	NA
AZE78578.1|3135652_3138760_+|protease	Extracellular serine protease precursor	protease	NA	NA	NA	NA
AZE78579.1|3138854_3140279_+	Lipase	NA	NA	NA	NA	NA
AZE78580.1|3140412_3140637_-	hypothetical protein	NA	NA	NA	NA	NA
AZE78581.1|3140824_3142471_+	hypothetical protein	NA	NA	NA	NA	NA
AZE78582.1|3142467_3144726_+	DinG family ATP-dependent helicase	NA	NA	NA	NA	NA
AZE78583.1|3145451_3145997_+	hypothetical protein	NA	NA	NA	NA	NA
AZE78584.1|3146081_3146294_+	hypothetical protein	NA	NA	NA	NA	NA
AZE78585.1|3146305_3146440_+	hypothetical protein	NA	NA	NA	NA	NA
AZE78586.1|3146430_3147783_-	sodium/hydrogen exchanger family protein	NA	NA	NA	NA	NA
AZE78587.1|3147965_3149180_+	Aspartate aminotransferase	NA	NA	NA	NA	NA
AZE78588.1|3149205_3149529_-	Thioredoxin	NA	A0A1J0GW78	Streptomyces_phage	41.9	8.0e-18
AZE78589.1|3149525_3149786_-	Thioredoxin	NA	NA	NA	NA	NA
AZE78590.1|3149927_3150368_-	Transcriptional regulator, AsnC family	NA	NA	NA	NA	NA
AZE78591.1|3150476_3151379_+	Permease of the drug/metabolite transporter (DMT) superfamily	NA	NA	NA	NA	NA
AZE78592.1|3151356_3153375_-|protease	putative protease YdcP	protease	Q6DW11	Phage_TP	29.2	8.0e-23
AZE78593.1|3153446_3153563_+	hypothetical protein	NA	NA	NA	NA	NA
AZE78594.1|3153591_3155241_+	Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase	NA	A0A2H4PQU7	Staphylococcus_phage	37.2	2.1e-74
AZE78595.1|3155262_3156030_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZE78596.1|3156042_3157227_+	3-ketoacyl-CoA thiolase	NA	NA	NA	NA	NA
AZE78597.1|3157236_3158364_+	Acyl-CoA dehydrogenase, short-chain specific	NA	NA	NA	NA	NA
AZE78598.1|3158375_3159149_+	Enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZE78599.1|3159641_3160793_-	Acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZE78600.1|3160796_3161900_-	3-hydroxyisobutyryl-CoA hydrolase	NA	NA	NA	NA	NA
AZE78601.1|3162017_3162881_-	Esterase/lipase	NA	NA	NA	NA	NA
AZE78602.1|3162880_3164494_-	putative cytochrome P450 hydroxylase	NA	NA	NA	NA	NA
AZE78603.1|3164495_3166115_-	Putative cytochrome P450 hydroxylase	NA	NA	NA	NA	NA
AZE78604.1|3166388_3167096_-	Putative transmembrane protein	NA	NA	NA	NA	NA
AZE78605.1|3167262_3167487_-	hypothetical protein	NA	NA	NA	NA	NA
AZE78606.1|3167772_3169395_-	4-amino-4-deoxy-L-arabinose transferase	NA	NA	NA	NA	NA
AZE78607.1|3169395_3170778_-	UDP-glucose 6-dehydrogenase	NA	A0A127AXI2	Bacillus_phage	38.2	1.3e-80
AZE78608.1|3170774_3171188_-	Undecaprenyl phosphate-aminoarabinose flippase subunit ArnF	NA	NA	NA	NA	NA
AZE78609.1|3171184_3171532_-	Undecaprenyl phosphate-aminoarabinose flippase subunit ArnE	NA	NA	NA	NA	NA
AZE78610.1|3171528_3173184_-	Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase	NA	NA	NA	NA	NA
AZE78611.1|3173180_3174065_-	4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase ArnD	NA	NA	NA	NA	NA
AZE78612.1|3174064_3176068_-	UDP-4-amino-4-deoxy-L-arabinose formyltransferase	NA	A0A2K9KZK0	Tupanvirus	26.0	2.4e-19
AZE78613.1|3176064_3177099_-	Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase	NA	S5FKN0	Shigella_phage	32.4	2.1e-35
AZE78614.1|3177510_3178323_+	hypothetical protein	NA	NA	NA	NA	NA
3178431:3178454	attL	ATCGGGAGCAAGCCCCCTCCCACA	NA	NA	NA	NA
AZE78615.1|3178588_3179503_+|integrase	Phage integrase family protein	integrase	NA	NA	NA	NA
AZE78615.1|3178588_3179503_+|integrase	Phage integrase family protein	integrase	NA	NA	NA	NA
3179528:3179551	attR	TGTGGGAGGGGGCTTGCTCCCGAT	NA	NA	NA	NA
>prophage 4
CP027758	Pseudomonas synxantha strain R2-54-08W chromosome, complete genome	6277070	3803729	3813719	6277070	tRNA	uncultured_Caudovirales_phage(71.43%)	12	NA	NA
AZE79176.1|3803729_3804554_-|tRNA	tRNA(Cytosine32)-2-thiocytidine synthetase	tRNA	A0A0U2S5Z2	Escherichia_phage	72.0	6.9e-106
AZE79177.1|3804837_3805440_+	Inner membrane protein YohC	NA	NA	NA	NA	NA
AZE79178.1|3805569_3806064_+	Protein SprT	NA	NA	NA	NA	NA
AZE79179.1|3806158_3807334_-	Alpha-methylacyl-CoA racemase	NA	NA	NA	NA	NA
AZE79180.1|3807491_3807884_+|tRNA	tRNA 5-methylaminomethyl-2-thiouridine synthase subunit TusD	tRNA	A0A2H4JA39	uncultured_Caudovirales_phage	84.6	9.6e-58
AZE79181.1|3807885_3808236_+|tRNA	tRNA 5-methylaminomethyl-2-thiouridine synthase subunit TusC	tRNA	A0A2H4J8C0	uncultured_Caudovirales_phage	69.2	1.6e-40
AZE79182.1|3808235_3808514_+|tRNA	tRNA 5-methylaminomethyl-2-thiouridine synthase subunit TusB	tRNA	A0A2H4JG28	uncultured_Caudovirales_phage	60.6	6.9e-26
AZE79183.1|3808510_3808846_+|tRNA	tRNA 2-thiouridine synthesis protein TusE	tRNA	A0A2H4J8B6	uncultured_Caudovirales_phage	77.5	4.7e-45
AZE79184.1|3808842_3809844_+	Anthranilate phosphoribosyltransferase like	NA	A0A2H4JBY5	uncultured_Caudovirales_phage	86.3	9.1e-169
AZE79185.1|3809932_3810928_+	Glutathione S-transferase, omega	NA	NA	NA	NA	NA
AZE79186.1|3811043_3812438_-	Precorrin-2 oxidase	NA	NA	NA	NA	NA
AZE79187.1|3812438_3813719_-|tRNA	Seryl-tRNA synthetase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	53.6	6.3e-98
