The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP027749	Pseudomonas chlororaphis subsp. aureofaciens strain ChPhzTR39 chromosome, complete genome	7046099	1327352	1418183	7046099	tRNA,tail,plate,protease	Pseudomonas_phage(41.18%)	95	NA	NA
AZE21646.1|1327352_1328705_+|protease	Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage	protease	NA	NA	NA	NA
AZE21647.1|1328779_1331167_+	Outer membrane protein assembly factor YaeT	NA	NA	NA	NA	NA
AZE21648.1|1331212_1331716_+	Outer membrane chaperone Skp, precursor	NA	NA	NA	NA	NA
AZE21649.1|1331719_1332775_+	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	NA	NA	NA	NA	NA
AZE21650.1|1332883_1333324_+	3-hydroxyacyl-ACP dehydratase	NA	NA	NA	NA	NA
AZE21651.1|1333320_1334097_+	Acyl-ADP--UDP-N- acetylglucosamine O-acyltransferase	NA	NA	NA	NA	NA
AZE21652.1|1334099_1335230_+	Lipid-A-disaccharide synthase	NA	NA	NA	NA	NA
AZE21653.1|1335241_1335874_+	Ribonuclease HII	NA	V5LS49	Emiliania_huxleyi_virus	38.9	1.7e-27
AZE21654.1|1335943_1339468_+	DNA polymerase III alpha subunit	NA	A0A2L1IZ23	Streptomyces_phage	38.0	1.4e-195
AZE21655.1|1339608_1340556_+	Acetyl-coenzyme A carboxyl transferase alpha chain	NA	NA	NA	NA	NA
AZE21656.1|1340675_1342004_+|tRNA	tRNA(Ile)-lysidine synthetase	tRNA	NA	NA	NA	NA
AZE21657.1|1342049_1342193_+	hypothetical protein	NA	NA	NA	NA	NA
AZE21658.1|1342385_1343909_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	53.1	5.7e-146
AZE21659.1|1343914_1344760_+	2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase	NA	E3T537	Cafeteria_roenbergensis_virus	42.8	9.4e-50
AZE21660.1|1344917_1346207_+	Enolase	NA	A0A1X9I5Z8	Streptococcus_phage	59.2	9.0e-137
AZE21661.1|1346379_1346658_+	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	NA	NA	NA	NA	NA
AZE21662.1|1346654_1347362_+	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
AZE21663.1|1347531_1348428_-	Transcriptional regulator, LysR family, in formaldehyde detoxification operon	NA	NA	NA	NA	NA
AZE21664.1|1348534_1349647_+	S-(hydroxymethyl)glutathione dehydrogenase	NA	E3SJ82	Synechococcus_phage	27.2	8.3e-30
AZE21665.1|1349735_1350581_+	S-formylglutathione hydrolase	NA	NA	NA	NA	NA
AZE21666.1|1350632_1351106_+	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA	NA
AZE21667.1|1351102_1352161_+|tRNA	tRNA pseudouridine(13) synthase	tRNA	NA	NA	NA	NA
AZE21668.1|1352148_1352898_+	5'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	52.6	1.4e-68
AZE21669.1|1352897_1353575_+	Protein-L-isoaspartate O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	52.0	6.8e-43
AZE21670.1|1353784_1354618_+	Murein hydrolase activator NlpD	NA	A0A0S2SXL7	Bacillus_phage	33.3	6.3e-06
AZE21671.1|1354724_1355729_+	RNA polymerase sigma factor RpoS	NA	G8CLC7	Synechococcus_phage	35.8	5.0e-34
AZE21672.1|1356230_1356554_-	4Fe-4S dicluster domain	NA	NA	NA	NA	NA
AZE21673.1|1356696_1359276_-	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	23.5	3.1e-27
AZE21674.1|1359472_1360198_+	Transcriptional regulator	NA	B5TK58	Pseudomonas_phage	91.4	1.3e-124
AZE21675.1|1360753_1361182_+	hypothetical protein	NA	NA	NA	NA	NA
AZE21676.1|1361542_1362124_+	hypothetical protein	NA	NA	NA	NA	NA
AZE21677.1|1362226_1362574_+	Holin	NA	B5TK61	Pseudomonas_phage	87.7	1.0e-50
AZE21678.1|1362740_1363505_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A1W6DX33	Sphingobium_phage	26.3	2.0e-06
AZE21679.1|1363730_1364255_+	hypothetical protein	NA	NA	NA	NA	NA
AZE21680.1|1364258_1364867_+|plate	Baseplate assembly protein V	plate	A0A2H4JBW8	uncultured_Caudovirales_phage	59.1	1.8e-47
AZE21681.1|1364880_1365213_+|plate	Baseplate assembly protein W	plate	A0A2H4JI46	uncultured_Caudovirales_phage	69.1	2.1e-37
AZE21682.1|1365209_1366205_+|plate	Phage-related baseplate assembly protein	plate	A0A2H4JC04	uncultured_Caudovirales_phage	62.3	8.9e-108
AZE21683.1|1366201_1366936_+|tail	Phage tail fiber	tail	A0A2H4JDK0	uncultured_Caudovirales_phage	51.4	3.4e-40
AZE21684.1|1366932_1367463_+|tail	Phage tail fiber	tail	A2I2X8	Vibrio_virus	61.9	3.4e-50
AZE21685.1|1368042_1368372_+	hypothetical protein	NA	NA	NA	NA	NA
AZE21686.1|1368374_1368677_+	Phage protein	NA	Q8H9M8	Vibrio_phage	64.6	1.8e-11
AZE21687.1|1368763_1368985_+	hypothetical protein	NA	NA	NA	NA	NA
AZE21688.1|1368987_1370154_+|tail	Major tail sheath protein	tail	B0ZSG8	Halomonas_phage	57.5	1.4e-125
AZE21689.1|1370153_1370660_+	hypothetical protein	NA	Q6R4W3	Vibrio_virus	35.7	2.6e-23
AZE21690.1|1370786_1371398_+	hypothetical protein	NA	B0ZSH0	Halomonas_phage	36.4	1.5e-25
AZE21691.1|1371394_1371520_+	hypothetical protein	NA	NA	NA	NA	NA
AZE21692.1|1371526_1373734_+	Phage protein	NA	A0A2H4JAA5	uncultured_Caudovirales_phage	49.3	7.2e-09
AZE21693.1|1373733_1374117_+|tail	Unclassified tail protein	tail	A0A2H4JAC8	uncultured_Caudovirales_phage	59.8	4.0e-40
AZE21694.1|1374109_1374322_+|tail	P2-like prophage tail protein X	tail	A0A2H4JGD9	uncultured_Caudovirales_phage	61.4	6.9e-18
AZE21695.1|1374331_1375348_+|tail	Phage tail protein D	tail	A0A2H4JH05	uncultured_Caudovirales_phage	56.6	1.0e-106
AZE21696.1|1375490_1376075_+	hypothetical protein	NA	B5TK65	Pseudomonas_phage	72.5	3.1e-76
AZE21697.1|1376071_1376254_+	Mu-like prophage FluMu protein GP38	NA	B5TK66	Pseudomonas_phage	93.3	6.5e-25
AZE21698.1|1376253_1377750_+|tail	Bacteriophage tail sheath protein	tail	B5TK67	Pseudomonas_phage	91.0	2.0e-257
AZE21699.1|1377816_1378164_+|tail	Phage tail tube protein	tail	B5TK68	Pseudomonas_phage	93.9	2.9e-58
AZE21700.1|1378160_1378457_+|tail	Phage small tail protein E	tail	B5TK69	Pseudomonas_phage	94.9	2.3e-43
AZE21701.1|1380648_1381887_+|tail	Phage tail/DNA circulation protein	tail	B5TK71	Pseudomonas_phage	75.7	5.7e-181
AZE21702.1|1381890_1382931_+|tail	Prophage tail protein	tail	B5TK72	Pseudomonas_phage	82.7	3.8e-162
AZE21703.1|1383047_1383557_+|plate	Prophage baseplate assembly protein V	plate	B5TK73	Pseudomonas_phage	88.8	2.2e-78
AZE21704.1|1383556_1383955_+	Bacteriophage protein GP46	NA	B5TK74	Pseudomonas_phage	89.4	1.7e-65
AZE21705.1|1383944_1384985_+	Phage FluMu protein gp47	NA	B5TK75	Pseudomonas_phage	87.3	3.0e-167
AZE21706.1|1384972_1385572_+|tail	Prophage tail protein	tail	B5TK76	Pseudomonas_phage	91.0	2.5e-105
AZE21707.1|1385583_1386438_+|tail	Prophage tail fiber protein	tail	B5TK77	Pseudomonas_phage	76.4	1.5e-23
AZE21708.1|1386442_1387084_+|tail	putative tail fiber assembly-like protein	tail	B5TK78	Pseudomonas_phage	51.9	1.4e-37
AZE21709.1|1387215_1388136_+|tail	Prophage tail fiber protein	tail	B5TK77	Pseudomonas_phage	61.1	7.4e-24
AZE21710.1|1388135_1388615_+	hypothetical protein	NA	A0A291LAV4	Bordetella_phage	52.1	1.3e-11
AZE21711.1|1388774_1389677_+|tail	Prophage tail fiber protein	tail	B5TK81	Pseudomonas_phage	37.6	2.4e-35
AZE21712.1|1390228_1390969_+|tail	Prophage tail fiber protein	tail	B5TK77	Pseudomonas_phage	65.8	2.1e-21
AZE21713.1|1391048_1391402_+	hypothetical protein	NA	Q9ZXK5	Pseudomonas_virus	39.3	1.7e-16
AZE21714.1|1391447_1392011_+	Lytic enzyme	NA	B5TK83	Pseudomonas_phage	83.3	3.7e-87
AZE21715.1|1391992_1392529_+	hypothetical protein	NA	B5TK84	Pseudomonas_phage	71.3	6.3e-60
AZE21716.1|1392611_1393112_+	Nicotinamide-nucleotide amidase	NA	B5TK85	Pseudomonas_phage	86.1	1.0e-72
AZE21717.1|1393195_1394248_+	RecA protein	NA	A0A0S2MVG1	Bacillus_phage	60.9	4.4e-113
AZE21718.1|1394256_1394724_+	Regulatory protein RecX	NA	NA	NA	NA	NA
AZE21719.1|1394769_1395885_-	Decarboxylase family protein	NA	NA	NA	NA	NA
AZE21720.1|1396368_1396563_+	hypothetical protein	NA	NA	NA	NA	NA
AZE21721.1|1396564_1396987_-	Putative NADPH-quinone reductase (modulator of drug activity B)	NA	NA	NA	NA	NA
AZE21722.1|1397176_1397887_+	putative conserved protein YfiP, contains DTW domain	NA	NA	NA	NA	NA
AZE21723.1|1398221_1398872_+	Transcriptional regulator, LuxR family	NA	NA	NA	NA	NA
AZE21724.1|1398948_1399311_+	Diacylglycerol kinase	NA	NA	NA	NA	NA
AZE21725.1|1399307_1400234_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZE21726.1|1400367_1401147_+	Ferredoxin--NADP(+) reductase	NA	NA	NA	NA	NA
AZE21727.1|1401219_1401915_-	S-adenosylmethionine-dependent methyltransferase YaeB	NA	NA	NA	NA	NA
AZE21728.1|1402001_1402772_-	Rhamnolipid biosynthesis 3-oxoacyl-ACP reductase RhlG	NA	NA	NA	NA	NA
AZE21729.1|1402905_1403367_-	Uncharacterized protein YehS	NA	Q9EYF4	Enterobacteria_phage	51.3	8.5e-37
AZE21730.1|1403433_1404144_-	Ribosomal large subunit pseudouridine synthase F	NA	NA	NA	NA	NA
AZE21731.1|1404226_1404700_-	Acetyltransferase	NA	NA	NA	NA	NA
AZE21732.1|1404806_1406144_-	Ribosomal protein S12p Asp88 methylthiotransferase	NA	NA	NA	NA	NA
AZE21733.1|1406244_1406514_-	hypothetical protein	NA	NA	NA	NA	NA
AZE21734.1|1406535_1408377_+	Kup system potassium uptake protein	NA	M1HZV6	Acanthocystis_turfacea_Chlorella_virus	35.0	8.0e-78
AZE21735.1|1408575_1408851_-	hypothetical protein	NA	NA	NA	NA	NA
AZE21736.1|1409348_1410644_-	Alanylphosphatidylglycerol hydrolase, periplasmic	NA	NA	NA	NA	NA
AZE21737.1|1410643_1413292_-	Alanylphosphatidylglycerol synthase	NA	NA	NA	NA	NA
AZE21738.1|1414230_1415295_+	DNA polymerase IV	NA	NA	NA	NA	NA
AZE21739.1|1415496_1416450_-	putative lipoprotein	NA	NA	NA	NA	NA
AZE21740.1|1416467_1418183_-|tRNA	Prolyl-tRNA synthetase, bacterial type	tRNA	NA	NA	NA	NA
>prophage 2
CP027749	Pseudomonas chlororaphis subsp. aureofaciens strain ChPhzTR39 chromosome, complete genome	7046099	2240811	2354854	7046099	tRNA,plate,integrase,portal,tail,terminase,protease	uncultured_Caudovirales_phage(57.14%)	114	2243430:2243448	2341793:2341811
AZE22469.1|2240811_2241420_-|protease	SOS-response repressor and protease LexA	protease	A0A2H4JG58	uncultured_Caudovirales_phage	55.4	1.1e-12
AZE22470.1|2241672_2242380_+	putative transcriptional regulator for fatty acid degradation FadQ, TetR family	NA	NA	NA	NA	NA
AZE22471.1|2242572_2243583_+	beta-N-acetylglucosaminidase	NA	NA	NA	NA	NA
2243430:2243448	attL	GCTGGCCTTGAGCGCGGCC	NA	NA	NA	NA
AZE22472.1|2243594_2244338_+	S-methyl-5'-thioinosine phosphorylase	NA	NA	NA	NA	NA
AZE22473.1|2244442_2247136_-	DNA/RNA helicase, SNF2 family	NA	V9XTV7	Choristoneura_murinana_nucleopolyhedrovirus	29.9	1.0e-49
AZE22474.1|2247147_2247711_-	hypothetical protein	NA	NA	NA	NA	NA
AZE22475.1|2247721_2251171_-	Transcription-repair coupling factor	NA	NA	NA	NA	NA
AZE22476.1|2251419_2252985_+	NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
AZE22477.1|2253132_2254431_-	putative MFS-type transporter	NA	Q6JIH2	Burkholderia_virus	37.9	1.4e-68
AZE22478.1|2254804_2255782_+	FAD:protein FMN transferase	NA	NA	NA	NA	NA
AZE22479.1|2255983_2257378_+	Soluble pyridine nucleotide transhydrogenase	NA	NA	NA	NA	NA
AZE22480.1|2257420_2258143_-	Glycerophosphoryl diester phosphodiesterase	NA	A0A292GJA3	Xanthomonas_phage	40.4	7.8e-05
AZE22481.1|2258204_2258792_-	hypothetical protein	NA	NA	NA	NA	NA
AZE22482.1|2258886_2260137_+	Lipoprotein releasing system transmembrane protein LolC	NA	NA	NA	NA	NA
AZE22483.1|2260129_2260828_+	Lipoprotein-releasing system ATP-binding protein LolD	NA	G9BWD6	Planktothrix_phage	41.1	1.3e-36
AZE22484.1|2260892_2262137_+	Lipoprotein releasing system transmembrane protein LolE	NA	NA	NA	NA	NA
AZE22485.1|2262199_2263561_-	Copper sensory histidine kinase CusS	NA	B5LWN8	Feldmannia_species_virus	22.7	3.5e-06
AZE22486.1|2263560_2264241_-	Copper-sensing two-component system response regulator CusR	NA	NA	NA	NA	NA
AZE22487.1|2264396_2264951_+	Copper tolerance protein	NA	NA	NA	NA	NA
AZE22488.1|2265019_2265850_+	NADPH-dependent 7-cyano-7-deazaguanine reductase	NA	A0A2I7SAX1	Vibrio_phage	37.4	2.1e-38
AZE22489.1|2265898_2266162_-	Chromosome segregation ATPase	NA	NA	NA	NA	NA
AZE22490.1|2266275_2266896_-	Phosphonoacetaldehyde phosphonohydrolase-related protein	NA	NA	NA	NA	NA
AZE22491.1|2267098_2267782_+	Outer-membrane-phospholipid-binding lipoprotein MlaA	NA	NA	NA	NA	NA
AZE22492.1|2267842_2268142_-	hypothetical protein	NA	NA	NA	NA	NA
AZE22493.1|2268419_2269601_+	Serine phosphatase RsbU, regulator of sigma subunit	NA	NA	NA	NA	NA
AZE22494.1|2269600_2270083_+	Serine-protein kinase RsbW	NA	NA	NA	NA	NA
AZE22495.1|2270157_2271084_-	Transaldolase	NA	A0A127KNC6	Cyanophage	33.5	1.6e-13
AZE22496.1|2271273_2272293_-|tRNA	tRNA-dihydrouridine(20/20a) synthase	tRNA	NA	NA	NA	NA
AZE22497.1|2272395_2273493_+|integrase	Phage integrase family protein	integrase	L7TP61	Pseudomonas_virus	73.8	4.3e-156
AZE22498.1|2274264_2274537_-	hypothetical protein	NA	A0A2K8HN48	Pseudomonas_phage	60.7	5.9e-22
AZE22499.1|2274533_2276690_-	C-5 cytosine-specific DNA methylase family protein	NA	Q5QF27	Pseudomonas_virus	60.2	1.4e-254
AZE22500.1|2276686_2277808_-	hypothetical protein	NA	NA	NA	NA	NA
AZE22501.1|2277804_2277894_-	hypothetical protein	NA	NA	NA	NA	NA
AZE22502.1|2277890_2278112_-	hypothetical protein	NA	NA	NA	NA	NA
AZE22503.1|2278108_2278513_-	hypothetical protein	NA	NA	NA	NA	NA
AZE22504.1|2278561_2278879_-	transcriptional regulator, putative	NA	NA	NA	NA	NA
AZE22505.1|2279037_2279322_-	DNA-binding protein Roi-related protein	NA	NA	NA	NA	NA
AZE22506.1|2279332_2279923_-	hypothetical protein	NA	NA	NA	NA	NA
AZE22507.1|2279919_2280096_-	hypothetical protein	NA	NA	NA	NA	NA
AZE22508.1|2280263_2281589_+	hypothetical protein	NA	NA	NA	NA	NA
AZE22509.1|2281653_2282379_-	repressor protein c2	NA	A8CGC0	Salmonella_phage	37.9	6.0e-29
AZE22510.1|2282457_2282718_+	Regulatory protein Cro of bacteriophage	NA	A0A0D4DBS7	Acinetobacter_phage	44.7	7.2e-09
AZE22511.1|2283051_2283570_+	hypothetical protein	NA	NA	NA	NA	NA
AZE22512.1|2283779_2285996_+	DNA primase, phage associated	NA	A0A2D1GN57	Marinobacter_phage	47.1	3.2e-190
AZE22513.1|2285988_2286351_+	hypothetical protein	NA	NA	NA	NA	NA
AZE22514.1|2286869_2287214_+	Holin	NA	A0A2H4J893	uncultured_Caudovirales_phage	82.4	1.4e-44
AZE22515.1|2287359_2287959_+	hypothetical protein	NA	A0A2H4JG15	uncultured_Caudovirales_phage	67.4	2.9e-61
AZE22516.1|2287963_2289985_+|terminase	terminase, large subunit, putative	terminase	A0A2H4J898	uncultured_Caudovirales_phage	83.9	0.0e+00
AZE22517.1|2289986_2290193_+	hypothetical protein	NA	A0A2H4JA19	uncultured_Caudovirales_phage	72.1	2.2e-21
AZE22518.1|2290192_2291674_+|portal	phage portal protein, lambda family	portal	A0A2H4JFL5	uncultured_Caudovirales_phage	84.4	5.7e-244
AZE22519.1|2291670_2292816_+|protease	Prophage Clp protease-like protein	protease	A0A2H4JDI2	uncultured_Caudovirales_phage	70.6	2.4e-141
AZE22520.1|2292812_2293157_+	hypothetical protein	NA	A0A2H4JF15	uncultured_Caudovirales_phage	86.0	1.5e-46
AZE22521.1|2293320_2294316_+	Phage protein	NA	A0A2H4J890	uncultured_Caudovirales_phage	87.3	8.5e-167
AZE22522.1|2294318_2294633_+	hypothetical protein	NA	A0A2H4J879	uncultured_Caudovirales_phage	58.7	3.7e-28
AZE22523.1|2294629_2295292_+	hypothetical protein	NA	A0A2H4JBV1	uncultured_Caudovirales_phage	63.3	4.0e-72
AZE22524.1|2295284_2295815_+	hypothetical protein	NA	A0A2H4J881	uncultured_Caudovirales_phage	55.2	2.4e-43
AZE22525.1|2295811_2296393_+|plate	Baseplate assembly protein V	plate	A0A2H4JG06	uncultured_Caudovirales_phage	65.1	5.1e-55
AZE22526.1|2296436_2296652_+	hypothetical protein	NA	NA	NA	NA	NA
AZE22527.1|2296654_2296981_+|plate	Phage baseplate assembly protein	plate	A0A2H4JA09	uncultured_Caudovirales_phage	65.1	6.2e-34
AZE22528.1|2296977_2297859_+|plate	Baseplate assembly protein J	plate	A0A2H4JFK9	uncultured_Caudovirales_phage	69.3	7.6e-111
AZE22529.1|2297860_2298469_+|tail	Phage tail fiber	tail	A0A2H4JDH5	uncultured_Caudovirales_phage	72.2	1.4e-79
AZE22530.1|2298461_2299547_+|tail	Phage tail fiber protein	tail	A0A077K818	Ralstonia_phage	53.7	3.1e-69
AZE22531.1|2299778_2299925_+	hypothetical protein	NA	NA	NA	NA	NA
AZE22532.1|2299998_2300298_-	hypothetical protein	NA	NA	NA	NA	NA
AZE22533.1|2300560_2301727_+|tail	Phage tail sheath monomer	tail	A0A2H4J869	uncultured_Caudovirales_phage	81.8	2.9e-182
AZE22534.1|2301739_2302249_+|tail	Phage major tail tube protein	tail	A0A2H4JBU0	uncultured_Caudovirales_phage	73.1	4.3e-66
AZE22535.1|2302276_2302573_+	hypothetical protein	NA	A0A2H4J873	uncultured_Caudovirales_phage	57.4	2.7e-20
AZE22536.1|2302704_2305245_+	Phage protein	NA	A0A2H4JG00	uncultured_Caudovirales_phage	37.8	2.8e-81
AZE22537.1|2305254_2306100_+	Phage protein U	NA	A0A2H4J875	uncultured_Caudovirales_phage	58.2	6.6e-88
AZE22538.1|2306074_2306281_+|tail	Phage tail protein	tail	A0A2H4J9Z9	uncultured_Caudovirales_phage	68.7	7.1e-20
AZE22539.1|2306337_2307390_+|tail	Phage tail protein D	tail	A0A2H4JBF6	uncultured_Caudovirales_phage	74.9	9.3e-148
AZE22540.1|2307413_2307965_+	Phage endolysin	NA	A0A2H4JHX4	uncultured_Caudovirales_phage	68.7	5.5e-67
AZE22541.1|2307964_2308138_+	hypothetical protein	NA	NA	NA	NA	NA
AZE22542.1|2308234_2308459_+	hypothetical protein	NA	NA	NA	NA	NA
AZE22543.1|2308508_2308847_-	hypothetical protein	NA	NA	NA	NA	NA
AZE22544.1|2309346_2309766_+	Type II, N-methyl DNA methyltransferase (group alpha)	NA	Q5ZQW7	Pseudomonas_phage	73.3	8.2e-31
AZE22545.1|2309883_2310090_+	hypothetical protein	NA	NA	NA	NA	NA
AZE22546.1|2310089_2311013_+	hypothetical protein	NA	NA	NA	NA	NA
AZE22547.1|2312683_2313346_+	hypothetical protein	NA	NA	NA	NA	NA
AZE22548.1|2314071_2314710_-	FMN-dependent NADH-azoreductase	NA	NA	NA	NA	NA
AZE22549.1|2314804_2315659_+	Transcriptional regulator	NA	NA	NA	NA	NA
AZE22550.1|2315711_2316200_-	hypothetical protein	NA	NA	NA	NA	NA
AZE22551.1|2316457_2318020_+	Two-component transcriptional response regulator, LuxR family	NA	NA	NA	NA	NA
AZE22552.1|2318023_2318614_-	Acetyltransferase	NA	NA	NA	NA	NA
AZE22553.1|2318801_2319638_+	N-hydroxyarylamine O-acetyltransferase	NA	NA	NA	NA	NA
AZE22554.1|2319679_2320072_-	hypothetical protein	NA	NA	NA	NA	NA
AZE22555.1|2320133_2320553_-	hypothetical protein	NA	NA	NA	NA	NA
AZE22556.1|2320792_2322331_+	Xanthine/uracil permease family protein	NA	NA	NA	NA	NA
AZE22557.1|2322386_2323544_-	putative MFS-type transporter	NA	NA	NA	NA	NA
AZE22558.1|2323586_2323760_+	hypothetical protein	NA	NA	NA	NA	NA
AZE22559.1|2324452_2324686_+	hypothetical protein	NA	NA	NA	NA	NA
AZE22560.1|2324692_2324887_-	hypothetical protein	NA	NA	NA	NA	NA
AZE22561.1|2325021_2326218_-	aromatic-amino-acid aminotransferase	NA	NA	NA	NA	NA
AZE22562.1|2326553_2328569_+	Excinuclease ABC subunit B	NA	NA	NA	NA	NA
AZE22563.1|2328680_2328806_-	hypothetical protein	NA	NA	NA	NA	NA
AZE22564.1|2328809_2330291_+|tRNA	Glutamyl-tRNA synthetase	tRNA	NA	NA	NA	NA
AZE22565.1|2331224_2331764_+	Transcriptional regulator, AcrR family	NA	NA	NA	NA	NA
AZE22566.1|2331793_2332627_+	Putative hydrolase	NA	NA	NA	NA	NA
AZE22567.1|2332675_2333113_+	4-hydroxybenzoyl-CoA thioesterase domain protein	NA	NA	NA	NA	NA
AZE22568.1|2333231_2334191_+|tRNA	tRNA-dihydrouridine(16) synthase	tRNA	NA	NA	NA	NA
AZE22569.1|2334311_2334758_+	Small heat shock protein	NA	A0A1D8KN82	Synechococcus_phage	37.0	2.9e-18
AZE22570.1|2334943_2335642_+|tRNA	putative tRNA ligase	tRNA	NA	NA	NA	NA
AZE22571.1|2338318_2340010_-	Chaperone protein HscC	NA	M4R062	Micromonas_pusilla_virus	38.9	1.1e-78
AZE22572.1|2340118_2343397_-	Sensory box/GGDEF family protein	NA	A0A127AWB9	Bacillus_phage	31.2	3.8e-14
2341793:2341811	attR	GCTGGCCTTGAGCGCGGCC	NA	NA	NA	NA
AZE22573.1|2343478_2344369_-	Cys regulon transcriptional activator CysB	NA	NA	NA	NA	NA
AZE22574.1|2344514_2345933_+	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA	NA
AZE22575.1|2345943_2346588_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
AZE22576.1|2346594_2346762_-	hypothetical protein	NA	NA	NA	NA	NA
AZE22577.1|2346816_2347899_+	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
AZE22578.1|2347953_2349066_+	Aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
AZE22579.1|2349250_2350261_+	Aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
AZE22580.1|2350463_2353061_+	putative type IV pilus assembly FimV-related transmembrane protein	NA	NA	NA	NA	NA
AZE22581.1|2353139_2353799_-	Iron-sulfur cluster-binding protein	NA	NA	NA	NA	NA
AZE22582.1|2353999_2354854_+|tRNA	tRNA pseudouridine(38-40) synthase	tRNA	NA	NA	NA	NA
>prophage 3
CP027749	Pseudomonas chlororaphis subsp. aureofaciens strain ChPhzTR39 chromosome, complete genome	7046099	2365310	2372204	7046099		uncultured_Caudovirales_phage(42.86%)	7	NA	NA
AZE22593.1|2365310_2366180_-	Integrase	NA	A0A2H4J1K3	uncultured_Caudovirales_phage	91.3	2.0e-151
AZE22594.1|2366746_2367385_+	hypothetical protein	NA	A0A059VFX9	Pseudomonas_phage	60.1	4.0e-61
AZE22595.1|2367564_2368662_+	hypothetical protein	NA	W6MVL2	Pseudomonas_phage	29.5	2.9e-27
AZE22596.1|2368891_2369182_+	Cell wall hydrolase	NA	A0A2D1GNI1	Pseudomonas_phage	72.3	1.1e-37
AZE22597.1|2369181_2369700_+	hypothetical protein	NA	A0A2H4IZW4	uncultured_Caudovirales_phage	64.5	4.2e-53
AZE22598.1|2369703_2370411_-	Gifsy-2 prophage protein	NA	A0A2H4J991	uncultured_Caudovirales_phage	70.0	8.3e-92
AZE22599.1|2370806_2372204_-	Transposase	NA	W5R8L2	Staphylococcus_phage	32.5	2.2e-40
>prophage 4
CP027749	Pseudomonas chlororaphis subsp. aureofaciens strain ChPhzTR39 chromosome, complete genome	7046099	4413538	4419796	7046099	tRNA	uncultured_Caudovirales_phage(83.33%)	8	NA	NA
AZE24422.1|4413538_4413931_+|tRNA	tRNA 5-methylaminomethyl-2-thiouridine synthase subunit TusD	tRNA	A0A2H4JA39	uncultured_Caudovirales_phage	84.6	6.7e-59
AZE24423.1|4413934_4414216_+|tRNA	tRNA 5-methylaminomethyl-2-thiouridine synthase subunit TusC	tRNA	A0A2H4J8C0	uncultured_Caudovirales_phage	86.3	1.8e-18
AZE24424.1|4414295_4414595_+|tRNA	tRNA 5-methylaminomethyl-2-thiouridine synthase subunit TusB	tRNA	A0A2H4JG28	uncultured_Caudovirales_phage	69.7	1.1e-32
AZE24425.1|4414591_4414927_+|tRNA	tRNA 2-thiouridine synthesis protein TusE	tRNA	A0A2H4J8B6	uncultured_Caudovirales_phage	82.0	1.9e-46
AZE24426.1|4414923_4415925_+	Anthranilate phosphoribosyltransferase like	NA	A0A2H4JBY5	uncultured_Caudovirales_phage	84.1	1.8e-164
AZE24427.1|4416014_4417022_+	Glutathione S-transferase, omega	NA	NA	NA	NA	NA
AZE24428.1|4417120_4418515_-	Precorrin-2 oxidase	NA	NA	NA	NA	NA
AZE24429.1|4418515_4419796_-|tRNA	Seryl-tRNA synthetase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	55.1	2.1e-101
>prophage 5
CP027749	Pseudomonas chlororaphis subsp. aureofaciens strain ChPhzTR39 chromosome, complete genome	7046099	4533252	4541502	7046099	protease	Bacillus_virus(33.33%)	7	NA	NA
AZE24527.1|4533252_4533525_-	DNA-binding protein HU-beta	NA	A7KV42	Bacillus_phage	58.4	1.4e-18
AZE24528.1|4533675_4536072_-|protease	ATP-dependent protease La Type I	protease	A0A0R6PGP8	Moraxella_phage	52.1	2.0e-222
AZE24529.1|4536234_4536519_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	51.1	5.1e-16
AZE24530.1|4536515_4537517_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	62.0	2.7e-112
AZE24531.1|4537623_4538265_-|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	59.1	3.2e-58
AZE24532.1|4538358_4539669_-	Cell division trigger factor	NA	NA	NA	NA	NA
AZE24533.1|4539798_4541502_-	Retron-type RNA-directed DNA polymerase	NA	A0A0U4J920	Pseudomonas_phage	80.9	6.7e-273
