assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003851835.1_ASM385183v1	CP027746	Pseudomonas chlororaphis subsp. aurantiaca strain DSM 19603 chromosome, complete genome	1	977121-978229	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no		DEDDh,DinG,csa3,cas3,PD-DExK,WYL,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f	Orphan	GTTCACTGCCGGATAGGCAGCTTAGAAA,GTTCACTGCCGGATAGGCAGCTTAGAAA,GTTCACTGCCGGATAGGCAGCTTAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	17,18,18	18	Orphan	DEDDh,DinG,csa3,cas3,PD-DExK,WYL,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f	NA|39aa|up_4|CP027746.1_969852_969969_+,NA|111aa|up_0|CP027746.1_976547_976880_+,NA	NA|187aa|up_9|CP027746.1_964423_964984_+	PRK11789, PRK11789, 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	NA|279aa|up_8|CP027746.1_964980_965817_+	COG3725, AmpE, Membrane protein required for beta-lactamase induction [Defense mechanisms]	NA|677aa|up_7|CP027746.1_966021_968052_+	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|263aa|up_6|CP027746.1_968053_968842_-	cd01310, TatD_DNAse, TatD like proteins;  E	NA|332aa|up_5|CP027746.1_968844_969840_-	PRK11303, PRK11303, catabolite repressor/activator	NA|39aa|up_4|CP027746.1_969852_969969_+	NA	NA|954aa|up_3|CP027746.1_970136_972998_+	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism]	NA|314aa|up_2|CP027746.1_972997_973939_+	TIGR03828, pfkB, 1-phosphofructokinase	NA|581aa|up_1|CP027746.1_973950_975693_+	PRK10712, PRK10712, PTS system fructose-specific transporter subunits IIBC; Provisional	NA|111aa|up_0|CP027746.1_976547_976880_+	NA	NA|514aa|down_0|CP027746.1_978385_979927_+	COG3540, PhoD, Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism]	NA|843aa|down_1|CP027746.1_980046_982575_-	COG0369, CysJ, Sulfite reductase, alpha subunit (flavoprotein) [Inorganic ion transport and metabolism]	NA|758aa|down_2|CP027746.1_982852_985126_-	COG4774, Fiu, Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]	NA|227aa|down_3|CP027746.1_985331_986012_+	PRK05467, PRK05467, Fe(II)-dependent oxygenase superfamily protein; Provisional	NA|261aa|down_4|CP027746.1_986015_986798_+	sd00010, SLR, Sel1-like repeat	NA|388aa|down_5|CP027746.1_986904_988068_-	cd00622, PLPDE_III_ODC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Ornithine Decarboxylase	NA|386aa|down_6|CP027746.1_988652_989810_-	COG1125, OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]	NA|218aa|down_7|CP027746.1_989806_990460_-	COG1174, OpuBB, ABC-type proline/glycine betaine transport systems, permease component [Amino acid transport and metabolism]	NA|298aa|down_8|CP027746.1_990474_991368_-	cd13611, PBP2_YehZ, Substrate-binding domain YehZ of an osmoregulated ABC-type transporter; the type 2 periplasmic-binding protein fold	NA|239aa|down_9|CP027746.1_991388_992105_-	COG1174, OpuBB, ABC-type proline/glycine betaine transport systems, permease component [Amino acid transport and metabolism]
GCA_003851835.1_ASM385183v1	CP027746	Pseudomonas chlororaphis subsp. aurantiaca strain DSM 19603 chromosome, complete genome	4	5073542-5073619	4	CRISPRCasFinder	no	DEDDh	DEDDh,DinG,csa3,cas3,PD-DExK,WYL,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f	Unclear	CAGCCTTCGGCAGCGGCTACAGG	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,csa3,cas3,PD-DExK,WYL,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f	NA|41aa|up_8|CP027746.1_5052188_5052311_+,NA|146aa|up_5|CP027746.1_5066933_5067371_-,NA|156aa|down_7|CP027746.1_5081065_5081533_+	NA|273aa|up_9|CP027746.1_5050548_5051367_-	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase	NA|41aa|up_8|CP027746.1_5052188_5052311_+	NA	NA|4339aa|up_7|CP027746.1_5052936_5065953_-	PRK05691, PRK05691, peptide synthase; Validated	NA|183aa|up_6|CP027746.1_5066328_5066877_+	PRK07037, PRK07037, extracytoplasmic-function sigma-70 factor; Validated	NA|146aa|up_5|CP027746.1_5066933_5067371_-	NA	NA|264aa|up_4|CP027746.1_5067442_5068234_-	smart00062, PBPb, Bacterial periplasmic substrate-binding proteins	NA|208aa|up_3|CP027746.1_5068334_5068958_-	pfam17932, TetR_C_24, Tetracyclin repressor-like, C-terminal domain	NA|597aa|up_2|CP027746.1_5069168_5070959_+	pfam07287, AtuA, Acyclic terpene utilisation family protein AtuA	NA|290aa|up_1|CP027746.1_5070971_5071841_+	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR	NA|539aa|up_0|CP027746.1_5071844_5073461_+	COG4799, COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]	NA|386aa|down_0|CP027746.1_5073669_5074827_+	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|279aa|down_1|CP027746.1_5074823_5075660_+	PRK05995, PRK05995, enoyl-CoA hydratase; Provisional	NA|654aa|down_2|CP027746.1_5075663_5077625_+	COG4770, COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism]	DEDDh|181aa|down_3|CP027746.1_5077694_5078237_+	COG5018, KapD, Inhibitor of the KinA pathway to sporulation, predicted exonuclease [General function prediction only]	NA|95aa|down_4|CP027746.1_5078319_5078604_+	pfam06865, DUF1255, Protein of unknown function (DUF1255)	NA|268aa|down_5|CP027746.1_5078686_5079490_-	COG3217, COG3217, Uncharacterized Fe-S protein [General function prediction only]	NA|312aa|down_6|CP027746.1_5079589_5080525_-	COG0835, CheW, Chemotaxis signal transduction protein [Cell motility and secretion / Signal transduction mechanisms]	NA|156aa|down_7|CP027746.1_5081065_5081533_+	NA	NA|298aa|down_8|CP027746.1_5082036_5082930_+	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|220aa|down_9|CP027746.1_5082926_5083586_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]
GCA_003851835.1_ASM385183v1	CP027746	Pseudomonas chlororaphis subsp. aurantiaca strain DSM 19603 chromosome, complete genome	5	5821034-5822801	2,5,2,3	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f	DEDDh,DinG,csa3,cas3,PD-DExK,WYL,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f	Type I-F	CTTCACTGCCGTGTAGGCAGCTTAGAAA,CTTCACTGCCGTGTAGGCAGCTTAGAAA,CTTCACTGCCGTGTAGGCAGCTTAGAAA,CTTCACTGCCGTGTAGGCAGCTTAGAAA	28,28,28,28	0	0	NA	NA	I-F:I-F:I-F:I-F	27,29,28,27	29	TypeI-F	DEDDh,DinG,csa3,cas3,PD-DExK,WYL,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f	NA|92aa|up_9|CP027746.1_5808770_5809046_+,NA|80aa|down_1|CP027746.1_5824361_5824601_+,NA|128aa|down_4|CP027746.1_5827483_5827867_-	NA|92aa|up_9|CP027746.1_5808770_5809046_+	NA	NA|650aa|up_8|CP027746.1_5809181_5811131_+	cd07389, MPP_PhoD, Bacillus subtilis PhoD and related proteins, metallophosphatase domain	NA|133aa|up_7|CP027746.1_5811188_5811587_-	PRK13725, PRK13725, tRNA(fMet)-specific endonuclease VapC	NA|77aa|up_6|CP027746.1_5811586_5811817_-	COG4456, VagC, Virulence-associated protein and related proteins [Function unknown]	cas1|326aa|up_5|CP027746.1_5812094_5813072_+	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	cas3-cas2|1139aa|up_4|CP027746.1_5813068_5816485_+	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas8f|453aa|up_3|CP027746.1_5816937_5818296_+	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1)	cas5f|331aa|up_2|CP027746.1_5818288_5819281_+	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas7f|341aa|up_1|CP027746.1_5819313_5820336_+	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas6f|188aa|up_0|CP027746.1_5820339_5820903_+	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4)	NA|417aa|down_0|CP027746.1_5822963_5824214_+	COG0160, GabT, 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]	NA|80aa|down_1|CP027746.1_5824361_5824601_+	NA	NA|274aa|down_2|CP027746.1_5824610_5825432_-	COG2159, COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]	NA|425aa|down_3|CP027746.1_5825838_5827113_+	pfam02435, Glyco_hydro_68, Levansucrase/Invertase	NA|128aa|down_4|CP027746.1_5827483_5827867_-	NA	NA|505aa|down_5|CP027746.1_5827863_5829378_-	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]	NA|166aa|down_6|CP027746.1_5829487_5829985_-	COG0537, Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases [Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only]	NA|319aa|down_7|CP027746.1_5830033_5830990_-	cd03511, Rhizopine-oxygenase-like, This CD includes the putative hydrocarbon oxygenase, MocD, a bacterial rhizopine (3-O-methyl-scyllo-inosamine, 3-O-MSI) oxygenase, and other related proteins	NA|344aa|down_8|CP027746.1_5831016_5832048_-	cd06214, PA_degradation_oxidoreductase_like, NAD(P) binding domain of ferredoxin reductase like phenylacetic acid (PA) degradation oxidoreductase	NA|435aa|down_9|CP027746.1_5832044_5833349_-	pfam00487, FA_desaturase, Fatty acid desaturase
