The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP027716	Pseudomonas chlororaphis strain Pb-St2 chromosome, complete genome	6613798	1268730	1358320	6613798	tRNA,plate,tail,protease	Pseudomonas_phage(42.31%)	92	NA	NA
AZD27922.1|1268730_1270083_+|protease	Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage	protease	NA	NA	NA	NA
AZD27923.1|1270157_1272545_+	Outer membrane protein assembly factor YaeT	NA	NA	NA	NA	NA
AZD27924.1|1272590_1273094_+	Outer membrane chaperone Skp, precursor	NA	NA	NA	NA	NA
AZD27925.1|1273097_1274153_+	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	NA	NA	NA	NA	NA
AZD27926.1|1274262_1274703_+	3-hydroxyacyl-ACP dehydratase	NA	NA	NA	NA	NA
AZD27927.1|1274699_1275476_+	Acyl-ADP--UDP-N- acetylglucosamine O-acyltransferase	NA	NA	NA	NA	NA
AZD27928.1|1275478_1276609_+	Lipid-A-disaccharide synthase	NA	NA	NA	NA	NA
AZD27929.1|1276620_1277253_+	Ribonuclease HII	NA	V5LS49	Emiliania_huxleyi_virus	38.9	7.5e-28
AZD27930.1|1277322_1280847_+	DNA polymerase III alpha subunit	NA	A0A2L1IZ23	Streptomyces_phage	38.0	3.6e-196
AZD27931.1|1280987_1281935_+	Acetyl-coenzyme A carboxyl transferase alpha chain	NA	NA	NA	NA	NA
AZD27932.1|1282054_1283383_+|tRNA	tRNA(Ile)-lysidine synthetase	tRNA	NA	NA	NA	NA
AZD27933.1|1283428_1283572_+	hypothetical protein	NA	NA	NA	NA	NA
AZD27934.1|1283657_1285289_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	53.5	6.9e-158
AZD27935.1|1285294_1286140_+	2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase	NA	E3T537	Cafeteria_roenbergensis_virus	42.8	1.2e-49
AZD27936.1|1286298_1287588_+	Enolase	NA	A0A1X9I5Z8	Streptococcus_phage	59.2	9.0e-137
AZD27937.1|1287760_1288039_+	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	NA	NA	NA	NA	NA
AZD27938.1|1288035_1288743_+	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
AZD27939.1|1288793_1289690_-	Transcriptional regulator, LysR family, in formaldehyde detoxification operon	NA	NA	NA	NA	NA
AZD27940.1|1289796_1290909_+	S-(hydroxymethyl)glutathione dehydrogenase	NA	E3SJ82	Synechococcus_phage	27.2	8.3e-30
AZD27941.1|1290992_1291844_+	S-formylglutathione hydrolase	NA	NA	NA	NA	NA
AZD27942.1|1291896_1292370_+	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA	NA
AZD27943.1|1292366_1293425_+|tRNA	tRNA pseudouridine(13) synthase	tRNA	NA	NA	NA	NA
AZD27944.1|1293412_1294162_+	5'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	52.6	2.3e-68
AZD27945.1|1294161_1294839_+	Protein-L-isoaspartate O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	52.0	1.2e-42
AZD27946.1|1295129_1295882_+	Murein hydrolase activator NlpD	NA	A0A0S2SXL7	Bacillus_phage	33.3	5.7e-06
AZD27947.1|1295988_1296993_+	RNA polymerase sigma factor RpoS	NA	G8CLC7	Synechococcus_phage	35.8	5.0e-34
AZD27948.1|1297493_1297817_-	4Fe-4S dicluster domain	NA	NA	NA	NA	NA
AZD27949.1|1297959_1300539_-	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	23.5	2.4e-27
AZD27950.1|1300735_1301461_+	Transcriptional regulator	NA	B5TK58	Pseudomonas_phage	91.4	1.3e-124
AZD27951.1|1301980_1302328_+	Holin	NA	B5TK61	Pseudomonas_phage	87.7	1.0e-50
AZD27952.1|1302494_1303259_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A1W6DX33	Sphingobium_phage	26.3	1.2e-06
AZD27953.1|1303479_1304004_+	hypothetical protein	NA	NA	NA	NA	NA
AZD27954.1|1304007_1304616_+|plate	Baseplate assembly protein V	plate	A0A2H4JBW8	uncultured_Caudovirales_phage	60.4	3.7e-48
AZD27955.1|1304629_1304962_+|plate	Baseplate assembly protein W	plate	A0A2H4JI46	uncultured_Caudovirales_phage	69.1	2.1e-37
AZD27956.1|1304958_1305954_+|plate	Phage-related baseplate assembly protein	plate	A0A2H4JC04	uncultured_Caudovirales_phage	63.5	2.3e-108
AZD27957.1|1305950_1306586_+	Tail protein I	NA	A0A2H4JDK0	uncultured_Caudovirales_phage	55.2	3.4e-44
AZD27958.1|1306586_1308533_+|tail	Prophage long tail fiber protein	tail	A4PE45	Ralstonia_virus	48.9	1.5e-58
AZD27959.1|1309078_1309300_+	hypothetical protein	NA	NA	NA	NA	NA
AZD27960.1|1309302_1310469_+|tail	Major tail sheath protein	tail	B0ZSG8	Halomonas_phage	57.5	2.9e-126
AZD27961.1|1310468_1310975_+	hypothetical protein	NA	Q6R4W3	Vibrio_virus	36.9	2.1e-25
AZD27962.1|1311102_1311684_+	hypothetical protein	NA	B0ZSH0	Halomonas_phage	39.4	9.1e-28
AZD27963.1|1311680_1311806_+	hypothetical protein	NA	NA	NA	NA	NA
AZD27964.1|1311812_1314062_+	Phage protein	NA	A0A2H4JAA5	uncultured_Caudovirales_phage	41.7	6.2e-08
AZD27965.1|1314061_1314445_+|tail	Unclassified tail protein	tail	A0A2H4JAC8	uncultured_Caudovirales_phage	53.5	4.7e-33
AZD27966.1|1314437_1314650_+|tail	P2-like prophage tail protein X	tail	A0A2H4JGD9	uncultured_Caudovirales_phage	68.6	3.9e-21
AZD27967.1|1314659_1315679_+|tail	Phage tail protein D	tail	A0A2H4JH05	uncultured_Caudovirales_phage	56.5	4.7e-104
AZD27968.1|1315859_1316444_+	hypothetical protein	NA	B5TK65	Pseudomonas_phage	71.5	6.9e-76
AZD27969.1|1316440_1316623_+	Mu-like prophage FluMu protein GP38	NA	B5TK66	Pseudomonas_phage	93.3	6.5e-25
AZD27970.1|1316622_1318119_+|tail	Bacteriophage tail sheath protein	tail	B5TK67	Pseudomonas_phage	90.8	3.5e-257
AZD27971.1|1318185_1318533_+|tail	Phage tail tube protein	tail	B5TK68	Pseudomonas_phage	93.9	2.9e-58
AZD27972.1|1318529_1318826_+|tail	Phage small tail protein E	tail	B5TK69	Pseudomonas_phage	94.9	2.3e-43
AZD27973.1|1318956_1320909_+|tail	Phage tail length tape-measure protein	tail	B5TK70	Pseudomonas_phage	51.2	1.2e-42
AZD27974.1|1320895_1322134_+|tail	Phage tail/DNA circulation protein	tail	B5TK71	Pseudomonas_phage	75.7	4.4e-181
AZD27975.1|1322137_1323178_+|tail	Prophage tail protein	tail	B5TK72	Pseudomonas_phage	82.7	1.1e-161
AZD27976.1|1323289_1323799_+|plate	Prophage baseplate assembly protein V	plate	B5TK73	Pseudomonas_phage	87.6	3.7e-78
AZD27977.1|1323798_1324197_+	Bacteriophage protein GP46	NA	B5TK74	Pseudomonas_phage	89.4	1.7e-65
AZD27978.1|1324186_1325227_+	Phage FluMu protein gp47	NA	B5TK75	Pseudomonas_phage	87.0	2.3e-167
AZD27979.1|1325214_1325814_+|tail	Prophage tail protein	tail	B5TK76	Pseudomonas_phage	91.5	8.5e-106
AZD27980.1|1325825_1326680_+|tail	Prophage tail fiber protein	tail	B5TK77	Pseudomonas_phage	75.0	4.4e-23
AZD27981.1|1326684_1327326_+|tail	putative tail fiber assembly-like protein	tail	B5TK78	Pseudomonas_phage	61.6	1.6e-38
AZD27982.1|1327422_1328343_+|tail	Prophage tail fiber protein	tail	B5TK77	Pseudomonas_phage	42.3	1.3e-23
AZD27983.1|1328342_1328831_+	hypothetical protein	NA	A0A291LAV4	Bordetella_phage	45.5	3.5e-09
AZD27984.1|1328998_1329919_+|tail	Prophage tail fiber protein	tail	B5TK81	Pseudomonas_phage	39.6	1.5e-37
AZD27985.1|1329921_1330407_+	Phage protein	NA	Q9ZXK5	Pseudomonas_virus	43.3	4.2e-18
AZD27986.1|1330478_1331219_+|tail	Prophage tail fiber protein	tail	B5TK77	Pseudomonas_phage	67.1	4.2e-22
AZD27987.1|1331221_1331653_+	hypothetical protein	NA	Q9ZXK5	Pseudomonas_virus	38.4	2.2e-23
AZD27988.1|1331698_1332262_+	Lytic enzyme	NA	B5TK83	Pseudomonas_phage	83.3	3.7e-87
AZD27989.1|1332243_1332780_+	hypothetical protein	NA	B5TK84	Pseudomonas_phage	70.8	2.2e-60
AZD27990.1|1332862_1333363_+	Nicotinamide-nucleotide amidase	NA	B5TK85	Pseudomonas_phage	86.1	1.0e-72
AZD27991.1|1333446_1334499_+	RecA protein	NA	A0A0S2MVG1	Bacillus_phage	60.9	4.4e-113
AZD27992.1|1334507_1334975_+	Regulatory protein RecX	NA	NA	NA	NA	NA
AZD27993.1|1335020_1336136_-	Decarboxylase family protein	NA	NA	NA	NA	NA
AZD27994.1|1336620_1336815_+	hypothetical protein	NA	NA	NA	NA	NA
AZD27995.1|1336816_1337239_-	Putative NADPH-quinone reductase (modulator of drug activity B)	NA	NA	NA	NA	NA
AZD27996.1|1337428_1338139_+	putative conserved protein YfiP, contains DTW domain	NA	NA	NA	NA	NA
AZD27997.1|1338473_1339124_+	Transcriptional regulator, LuxR family	NA	NA	NA	NA	NA
AZD27998.1|1339199_1339562_+	Diacylglycerol kinase	NA	NA	NA	NA	NA
AZD27999.1|1339558_1340485_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZD28000.1|1340618_1341398_+	Ferredoxin--NADP(+) reductase	NA	NA	NA	NA	NA
AZD28001.1|1341470_1342166_-	S-adenosylmethionine-dependent methyltransferase YaeB	NA	NA	NA	NA	NA
AZD28002.1|1342252_1343023_-	Rhamnolipid biosynthesis 3-oxoacyl-ACP reductase RhlG	NA	NA	NA	NA	NA
AZD28003.1|1343156_1343618_-	Uncharacterized protein YehS	NA	Q9EYF4	Enterobacteria_phage	51.3	1.1e-36
AZD28004.1|1343684_1344395_-	Ribosomal large subunit pseudouridine synthase F	NA	NA	NA	NA	NA
AZD28005.1|1344477_1344951_-	Acetyltransferase	NA	NA	NA	NA	NA
AZD28006.1|1345057_1346395_-	Ribosomal protein S12p Asp88 methylthiotransferase	NA	NA	NA	NA	NA
AZD28007.1|1346726_1348628_+	Kup system potassium uptake protein	NA	M1HZV6	Acanthocystis_turfacea_Chlorella_virus	34.9	1.3e-78
AZD28008.1|1348845_1349121_-	hypothetical protein	NA	NA	NA	NA	NA
AZD28009.1|1349621_1350917_-	Alanylphosphatidylglycerol hydrolase, periplasmic	NA	NA	NA	NA	NA
AZD28010.1|1350916_1353565_-	Alanylphosphatidylglycerol synthase	NA	NA	NA	NA	NA
AZD28011.1|1354503_1355568_+	DNA polymerase IV	NA	NA	NA	NA	NA
AZD28012.1|1355633_1356587_-	putative lipoprotein	NA	NA	NA	NA	NA
AZD28013.1|1356604_1358320_-|tRNA	Prolyl-tRNA synthetase, bacterial type	tRNA	NA	NA	NA	NA
>prophage 2
CP027716	Pseudomonas chlororaphis strain Pb-St2 chromosome, complete genome	6613798	4167289	4173560	6613798	tRNA	uncultured_Caudovirales_phage(83.33%)	8	NA	NA
AZD30538.1|4167289_4167682_+|tRNA	tRNA 5-methylaminomethyl-2-thiouridine synthase subunit TusD	tRNA	A0A2H4JA39	uncultured_Caudovirales_phage	83.8	9.6e-58
AZD30539.1|4167685_4168048_+|tRNA	tRNA 5-methylaminomethyl-2-thiouridine synthase subunit TusC	tRNA	A0A2H4J8C0	uncultured_Caudovirales_phage	75.0	1.9e-44
AZD30540.1|4168047_4168347_+|tRNA	tRNA 5-methylaminomethyl-2-thiouridine synthase subunit TusB	tRNA	A0A2H4JG28	uncultured_Caudovirales_phage	70.7	6.3e-33
AZD30541.1|4168343_4168679_+|tRNA	tRNA 2-thiouridine synthesis protein TusE	tRNA	A0A2H4J8B6	uncultured_Caudovirales_phage	82.0	8.5e-47
AZD30542.1|4168675_4169677_+	Anthranilate phosphoribosyltransferase like	NA	A0A2H4JBY5	uncultured_Caudovirales_phage	84.5	1.6e-165
AZD30543.1|4169766_4170774_+	Glutathione S-transferase, omega	NA	NA	NA	NA	NA
AZD30544.1|4170884_4172279_-	Precorrin-2 oxidase	NA	NA	NA	NA	NA
AZD30545.1|4172279_4173560_-|tRNA	Seryl-tRNA synthetase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	54.8	3.6e-101
