The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP027730	Pseudomonas sp. R3-52-08 chromosome, complete genome	5926806	960254	969285	5926806		uncultured_Caudovirales_phage(66.67%)	7	NA	NA
AZF19622.1|960254_961544_+	Arsenic efflux pump protein	NA	A0A2H4J144	uncultured_Caudovirales_phage	73.2	2.2e-175
AZF19623.1|961553_962024_+	Arsenate reductase	NA	A0A2H4J8A6	uncultured_Caudovirales_phage	60.9	4.7e-51
AZF19624.1|962023_962758_+	Arsenic resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	79.4	1.2e-104
AZF19625.1|962777_963326_+	Acetyltransferase, GNAT family	NA	A0A2H4J136	uncultured_Caudovirales_phage	53.4	2.6e-45
AZF19626.1|963581_965537_-	DNA/RNA helicase in PFGI-1-like cluster	NA	A0A1B3B0M9	Gordonia_phage	25.8	1.1e-24
AZF19627.1|965533_967414_-	hypothetical protein	NA	NA	NA	NA	NA
AZF19628.1|967524_969285_-	DNA topoisomerase I	NA	A0A1S5V180	Saudi_moumouvirus	29.9	5.1e-58
>prophage 2
CP027730	Pseudomonas sp. R3-52-08 chromosome, complete genome	5926806	1348597	1388915	5926806	tail,tRNA,plate	uncultured_Caudovirales_phage(36.36%)	47	NA	NA
AZF19975.1|1348597_1349068_+|tRNA	Cys-tRNA(Pro) deacylase YbaK	tRNA	NA	NA	NA	NA
AZF19976.1|1349208_1350252_-	Ferric iron ABC transporter, ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	37.1	3.3e-20
AZF19977.1|1350248_1351172_-	Ornithine carbamoyltransferase	NA	A0A1J0F9B8	Only_Syngen_Nebraska_virus	27.4	2.7e-18
AZF19978.1|1351602_1353711_+	Formate dehydrogenase-O, major subunit	NA	A0A077SK27	Escherichia_phage	23.5	2.9e-23
AZF19979.1|1353810_1354149_+	Glutaredoxin-related protein	NA	NA	NA	NA	NA
AZF19980.1|1354340_1354811_-	Bacterioferritin	NA	NA	NA	NA	NA
AZF19981.1|1355011_1355230_-	Bacterioferritin-associated ferredoxin	NA	NA	NA	NA	NA
AZF19982.1|1355475_1356078_+	Alkyl hydroperoxide reductase subunit C-like protein	NA	NA	NA	NA	NA
AZF19983.1|1356142_1356817_-	Ribonuclease T	NA	NA	NA	NA	NA
AZF19984.1|1356813_1357860_-	Dihydroorotase	NA	NA	NA	NA	NA
AZF19985.1|1358016_1358925_+	Sodium-type flagellar protein motY precursor	NA	NA	NA	NA	NA
AZF19986.1|1359054_1360272_+	Argininosuccinate synthase	NA	NA	NA	NA	NA
AZF19987.1|1360900_1361533_+	Two-component transcriptional response regulator, LuxR family	NA	NA	NA	NA	NA
AZF19988.1|1361620_1361803_-	hypothetical protein	NA	NA	NA	NA	NA
AZF19989.1|1361909_1362548_-	Endonuclease III	NA	NA	NA	NA	NA
AZF19990.1|1362617_1363592_-	Electron transport complex protein RnfB	NA	NA	NA	NA	NA
AZF19991.1|1363679_1365731_-|tRNA	Methionyl-tRNA synthetase	tRNA	NA	NA	NA	NA
AZF19992.1|1365903_1366998_+	[4Fe-4S] cluster assembly scaffold protein Mrp (ApbC)	NA	NA	NA	NA	NA
AZF19993.1|1367453_1367777_-	4Fe-4S dicluster domain	NA	NA	NA	NA	NA
AZF19994.1|1367919_1370511_-	DNA mismatch repair protein MutS	NA	A0A1V0SJ67	Klosneuvirus	21.5	2.1e-28
AZF19995.1|1370693_1371065_-	hypothetical protein	NA	NA	NA	NA	NA
AZF19996.1|1371057_1371546_-	GepA protein	NA	D0UIM3	Aggregatibacter_phage	44.5	6.4e-27
AZF19997.1|1371809_1372544_+	Transcriptional regulator	NA	B5TK58	Pseudomonas_phage	87.3	1.1e-118
AZF19998.1|1372587_1373919_-	Transposase	NA	NA	NA	NA	NA
AZF19999.1|1374166_1374286_+	hypothetical protein	NA	NA	NA	NA	NA
AZF20000.1|1374568_1374907_+	Holin	NA	B5TK61	Pseudomonas_phage	81.8	2.8e-45
AZF20001.1|1374926_1375442_+	hypothetical protein	NA	NA	NA	NA	NA
AZF20002.1|1375445_1376054_+|plate	Baseplate assembly protein V	plate	A0A2H4JBW8	uncultured_Caudovirales_phage	52.8	3.8e-45
AZF20003.1|1376066_1376399_+|plate	Baseplate assembly protein W	plate	A0A2H4JI46	uncultured_Caudovirales_phage	69.1	1.0e-36
AZF20004.1|1376395_1377391_+|plate	Phage-related baseplate assembly protein	plate	A0A2H4JC04	uncultured_Caudovirales_phage	64.1	6.0e-112
AZF20005.1|1377387_1378026_+|tail	Phage tail fiber	tail	A0A2H4JDK0	uncultured_Caudovirales_phage	51.9	7.3e-39
AZF20006.1|1378022_1378553_+|tail	Phage tail fiber protein	tail	B0ZSG1	Halomonas_phage	55.6	4.2e-48
AZF20007.1|1378606_1379359_+	hypothetical protein	NA	NA	NA	NA	NA
AZF20008.1|1379368_1379605_+	hypothetical protein	NA	NA	NA	NA	NA
AZF20009.1|1379693_1379867_+	hypothetical protein	NA	NA	NA	NA	NA
AZF20010.1|1379869_1381036_+|tail	Major tail sheath protein	tail	B0ZSG8	Halomonas_phage	57.0	1.2e-124
AZF20011.1|1381035_1381542_+	hypothetical protein	NA	Q6R4W3	Vibrio_virus	35.1	3.8e-22
AZF20012.1|1381594_1382176_+	hypothetical protein	NA	B0ZSH0	Halomonas_phage	37.7	5.9e-27
AZF20013.1|1382172_1382298_+	hypothetical protein	NA	NA	NA	NA	NA
AZF20014.1|1382304_1384524_+|tail	Phage tail length tape-measure protein	tail	NA	NA	NA	NA
AZF20015.1|1384523_1384907_+|tail	Unclassified tail protein	tail	A0A2H4JAC8	uncultured_Caudovirales_phage	57.5	1.3e-35
AZF20016.1|1384899_1385112_+|tail	P2-like prophage tail protein X	tail	A0A2H4JGD9	uncultured_Caudovirales_phage	62.9	2.0e-17
AZF20017.1|1385121_1386123_+|tail	Phage tail protein D	tail	A0A2H4JH05	uncultured_Caudovirales_phage	54.5	5.8e-99
AZF20018.1|1386145_1386703_+	Lytic enzyme	NA	B5TK83	Pseudomonas_phage	71.6	1.0e-73
AZF20019.1|1386690_1387191_+	hypothetical protein	NA	A0A2H4IZW4	uncultured_Caudovirales_phage	57.0	2.3e-32
AZF20020.1|1387272_1387773_+	Nicotinamide-nucleotide amidase	NA	B5TK85	Pseudomonas_phage	83.1	9.7e-71
AZF20021.1|1387856_1388915_+	RecA protein	NA	A0A0S2MVG1	Bacillus_phage	62.4	2.4e-111
>prophage 3
CP027730	Pseudomonas sp. R3-52-08 chromosome, complete genome	5926806	1493942	1498930	5926806		uncultured_Mediterranean_phage(33.33%)	6	NA	NA
AZF20123.1|1493942_1494692_+	5'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	49.4	3.6e-61
AZF20124.1|1494691_1495369_+	Protein-L-isoaspartate O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	53.1	3.1e-43
AZF20125.1|1495578_1496415_+	Murein hydrolase activator NlpD	NA	A0A0S2SXL7	Bacillus_phage	33.3	8.2e-06
AZF20126.1|1496520_1497528_+	RNA polymerase sigma factor RpoS	NA	G8CLC7	Synechococcus_phage	36.2	1.3e-34
AZF20127.1|1497766_1497976_-	Cold shock protein of CSP family	NA	Q9AZD3	Lactococcus_phage	66.7	2.2e-16
AZF20128.1|1498363_1498930_+	Deoxycytidine triphosphate deaminase	NA	S5VM63	Pseudomonas_phage	73.3	6.2e-74
>prophage 4
CP027730	Pseudomonas sp. R3-52-08 chromosome, complete genome	5926806	3029885	3075613	5926806	protease,holin	Bacillus_phage(25.0%)	39	NA	NA
AZF21522.1|3029885_3031187_+|protease	ABC-type protease exporter, membrane fusion protein family component PrtE/AprE	protease	NA	NA	NA	NA
AZF21523.1|3031189_3032530_+|protease	ABC-type protease exporter, outer membrane component PrtF/AprF	protease	NA	NA	NA	NA
AZF21524.1|3032562_3035520_+|protease	Putative serine protease	protease	NA	NA	NA	NA
AZF21525.1|3035678_3038786_+|protease	Extracellular serine protease precursor	protease	NA	NA	NA	NA
AZF21526.1|3038871_3040296_+	Lipase	NA	NA	NA	NA	NA
AZF21527.1|3040424_3040649_-	hypothetical protein	NA	NA	NA	NA	NA
AZF21528.1|3040836_3042483_+	hypothetical protein	NA	NA	NA	NA	NA
AZF21529.1|3042479_3044738_+	DinG family ATP-dependent helicase	NA	NA	NA	NA	NA
AZF21530.1|3044851_3045802_-	hypothetical protein	NA	NA	NA	NA	NA
AZF21531.1|3045804_3047214_-	hypothetical protein	NA	NA	NA	NA	NA
AZF21532.1|3047585_3048131_+	hypothetical protein	NA	NA	NA	NA	NA
AZF21533.1|3048215_3048431_+	hypothetical protein	NA	NA	NA	NA	NA
AZF21534.1|3048442_3048577_+	hypothetical protein	NA	NA	NA	NA	NA
AZF21535.1|3048670_3050017_-	sodium/hydrogen exchanger family protein	NA	NA	NA	NA	NA
AZF21536.1|3050128_3051385_-	diguanylate cyclase/phosphodiesterase	NA	W8CYM9	Bacillus_phage	41.0	6.3e-18
AZF21537.1|3051394_3051778_-	Polar differentiation response regulator	NA	NA	NA	NA	NA
AZF21538.1|3051762_3053103_-	hypothetical protein	NA	Q8QKV7	Ectocarpus_siliculosus_virus	35.3	7.7e-30
AZF21539.1|3053254_3053371_+	hypothetical protein	NA	NA	NA	NA	NA
AZF21540.1|3053418_3054951_+	D-xylose transport ATP-binding protein XylG	NA	A0A2H4PQG7	Staphylococcus_phage	30.3	1.3e-17
AZF21541.1|3054943_3055927_+	Ribose ABC transport system, permease protein RbsC	NA	NA	NA	NA	NA
AZF21542.1|3055961_3056894_+	Xylose ABC transporter, periplasmic xylose-binding protein XylF	NA	NA	NA	NA	NA
AZF21543.1|3056915_3057908_+	Ribose operon repressor	NA	NA	NA	NA	NA
AZF21544.1|3057923_3059384_+	Xylulose kinase	NA	NA	NA	NA	NA
AZF21545.1|3059436_3059877_-	Transcriptional regulator, AsnC family	NA	NA	NA	NA	NA
AZF21546.1|3059986_3060886_+	Permease of the drug/metabolite transporter (DMT) superfamily	NA	NA	NA	NA	NA
AZF21547.1|3060982_3063001_-|protease	putative protease YdcP	protease	Q6DW11	Phage_TP	29.5	2.8e-23
AZF21548.1|3063320_3063701_-	RidA superfamily protein	NA	NA	NA	NA	NA
AZF21549.1|3063773_3064643_-	Oxaloacetate decarboxylase	NA	NA	NA	NA	NA
AZF21550.1|3064933_3065890_+	ABC transporter, substrate-binding protein	NA	NA	NA	NA	NA
AZF21551.1|3065913_3067236_+	Nitrilotriacetate monooxygenase component A	NA	NA	NA	NA	NA
AZF21552.1|3067371_3068304_+	Gentisate 1,2-dioxygenase	NA	NA	NA	NA	NA
AZF21553.1|3068334_3068595_-	Metallothionein	NA	NA	NA	NA	NA
AZF21554.1|3068789_3069020_+	hypothetical protein	NA	NA	NA	NA	NA
AZF21555.1|3069241_3069859_+	Thymidylate kinase-like protein	NA	NA	NA	NA	NA
AZF21556.1|3070004_3071216_+	DipZ protein	NA	NA	NA	NA	NA
AZF21557.1|3071349_3072240_-	hypothetical protein	NA	NA	NA	NA	NA
AZF21558.1|3072321_3073557_-	hypothetical protein	NA	NA	NA	NA	NA
AZF21559.1|3073728_3073977_-	hypothetical protein	NA	NA	NA	NA	NA
AZF21560.1|3074017_3075613_-|holin	Glucose-methanol-choline (GMC) oxidoreductase:NAD binding site	holin	NA	NA	NA	NA
>prophage 5
CP027730	Pseudomonas sp. R3-52-08 chromosome, complete genome	5926806	3559835	3569895	5926806	tRNA	uncultured_Caudovirales_phage(71.43%)	12	NA	NA
AZF22007.1|3559835_3560660_-|tRNA	tRNA(Cytosine32)-2-thiocytidine synthetase	tRNA	A0A0U2S5Z2	Escherichia_phage	71.6	2.0e-105
AZF22008.1|3560954_3561557_+	Inner membrane protein YohC	NA	NA	NA	NA	NA
AZF22009.1|3561685_3562180_+	Protein SprT	NA	NA	NA	NA	NA
AZF22010.1|3562273_3563449_-	Alpha-methylacyl-CoA racemase	NA	NA	NA	NA	NA
AZF22011.1|3563608_3564001_+|tRNA	tRNA 5-methylaminomethyl-2-thiouridine synthase subunit TusD	tRNA	A0A2H4JA39	uncultured_Caudovirales_phage	82.2	5.9e-55
AZF22012.1|3564002_3564353_+|tRNA	tRNA 5-methylaminomethyl-2-thiouridine synthase subunit TusC	tRNA	A0A2H4J8C0	uncultured_Caudovirales_phage	70.2	1.4e-39
AZF22013.1|3564352_3564631_+|tRNA	tRNA 5-methylaminomethyl-2-thiouridine synthase TusB	tRNA	A0A2H4JG28	uncultured_Caudovirales_phage	57.6	2.9e-24
AZF22014.1|3564627_3564963_+|tRNA	tRNA 2-thiouridine synthesis protein TusE	tRNA	A0A2H4J8B6	uncultured_Caudovirales_phage	73.0	1.7e-42
AZF22015.1|3564959_3565961_+	Anthranilate phosphoribosyltransferase like	NA	A0A2H4JBY5	uncultured_Caudovirales_phage	85.7	8.5e-167
AZF22016.1|3566049_3567045_+	Glutathione S-transferase, omega	NA	NA	NA	NA	NA
AZF22017.1|3567219_3568614_-	Precorrin-2 oxidase	NA	NA	NA	NA	NA
AZF22018.1|3568614_3569895_-|tRNA	Seryl-tRNA synthetase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	53.3	8.2e-98
>prophage 6
CP027730	Pseudomonas sp. R3-52-08 chromosome, complete genome	5926806	3859633	3899509	5926806	tail,terminase	Pseudomonas_phage(64.86%)	57	NA	NA
AZF22267.1|3859633_3860158_-	hypothetical protein	NA	A0A2H4IZW4	uncultured_Caudovirales_phage	77.0	1.1e-59
AZF22268.1|3860154_3860625_-	structural protein P5, putative	NA	A0A2H4J6R1	uncultured_Caudovirales_phage	92.9	1.1e-68
AZF22269.1|3860621_3861809_-	hypothetical protein	NA	A0A2H4J1J6	uncultured_Caudovirales_phage	80.3	1.1e-128
AZF22270.1|3861862_3862552_-	hypothetical protein	NA	NA	NA	NA	NA
AZF22271.1|3862879_3866848_-|tail	Phage tail fiber protein	tail	A0A1B0VMH5	Pseudomonas_phage	69.9	0.0e+00
AZF22272.1|3866926_3867265_+	hypothetical protein	NA	NA	NA	NA	NA
AZF22273.1|3867313_3867907_-|tail	Phage tail assembly protein I	tail	A0A1B0VMI5	Pseudomonas_phage	94.9	7.7e-99
AZF22274.1|3867963_3868386_-	putative lipoprotein	NA	A0A1B0VMH3	Pseudomonas_phage	94.3	8.5e-68
AZF22275.1|3868388_3868715_-	hypothetical protein	NA	NA	NA	NA	NA
AZF22276.1|3869258_3869741_-	Zn peptidase	NA	NA	NA	NA	NA
AZF22277.1|3870001_3870262_+	hypothetical protein	NA	NA	NA	NA	NA
AZF22278.1|3870342_3870555_+	hypothetical protein	NA	NA	NA	NA	NA
AZF22279.1|3870565_3870808_-	hypothetical protein	NA	NA	NA	NA	NA
AZF22280.1|3870833_3871598_-|tail	Phage tail assembly protein	tail	A0A1B0VP68	Pseudomonas_phage	90.4	2.1e-141
AZF22281.1|3871600_3872353_-|tail	Phage minor tail protein	tail	A0A1B0VNE0	Pseudomonas_phage	88.8	8.4e-135
AZF22282.1|3872363_3872702_-|tail	Phage minor tail protein	tail	A0A1B0VMG7	Pseudomonas_phage	83.9	1.5e-54
AZF22283.1|3872701_3875764_-|tail	Phage tail length tape-measure protein 1	tail	A0A1B0VMG8	Pseudomonas_phage	39.5	9.5e-177
AZF22284.1|3875791_3876034_-	hypothetical protein	NA	A0A2H4J4F7	uncultured_Caudovirales_phage	56.0	6.4e-20
AZF22285.1|3876111_3876492_-	hypothetical protein	NA	A0A1B0VMH4	Pseudomonas_phage	51.9	4.2e-26
AZF22286.1|3876494_3877166_-	hypothetical protein	NA	A0A0H5BBY3	Pseudomonas_phage	43.7	3.2e-45
AZF22287.1|3877553_3877970_-	hypothetical protein	NA	A0A2H4J130	uncultured_Caudovirales_phage	56.2	1.9e-35
AZF22288.1|3877966_3878563_-	hypothetical protein	NA	A0A1B0VMI1	Pseudomonas_phage	52.8	4.6e-51
AZF22289.1|3878559_3878928_-	phage-related conserved hypothetical protein	NA	A0A1B0VRJ4	Pseudomonas_phage	96.7	5.1e-61
AZF22290.1|3878987_3879179_-	hypothetical protein	NA	NA	NA	NA	NA
AZF22291.1|3879228_3879729_-	phage-related conserved hypothetical protein	NA	A0A1B0VND3	Pseudomonas_phage	90.3	1.5e-79
AZF22292.1|3879731_3880181_-	hypothetical protein	NA	NA	NA	NA	NA
AZF22293.1|3880227_3881190_-	putative phage protein	NA	A0A1B0VMF8	Pseudomonas_phage	93.1	3.7e-167
AZF22294.1|3881202_3881931_-	hypothetical protein	NA	A0A1B0VMG1	Pseudomonas_phage	93.8	5.7e-120
AZF22295.1|3882072_3882591_+	hypothetical protein	NA	NA	NA	NA	NA
AZF22296.1|3882587_3883676_-	Phage protein	NA	A0A1B0VMF3	Pseudomonas_phage	95.0	3.0e-189
AZF22297.1|3883650_3885069_-	structural protein	NA	A0A1B0VMH0	Pseudomonas_phage	91.5	1.0e-258
AZF22298.1|3885065_3886367_-|terminase	Phage terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	60.1	1.0e-148
AZF22299.1|3886353_3886815_-	Phage protein	NA	A0A0S2SY97	Pseudomonas_phage	68.3	2.7e-43
AZF22300.1|3886846_3887470_-	hypothetical protein	NA	A0A1B0VRJ1	Pseudomonas_phage	95.7	2.6e-113
AZF22301.1|3887435_3887897_-	hypothetical protein	NA	A0A1B0VNC4	Pseudomonas_phage	53.4	1.2e-30
AZF22302.1|3887893_3888085_-	hypothetical protein	NA	NA	NA	NA	NA
AZF22303.1|3888081_3888303_-	hypothetical protein	NA	A0A2H4JFZ5	uncultured_Caudovirales_phage	81.7	2.1e-30
AZF22304.1|3888299_3888563_-	hypothetical protein	NA	NA	NA	NA	NA
AZF22305.1|3888622_3888871_-	hypothetical protein	NA	NA	NA	NA	NA
AZF22306.1|3888918_3889263_-	hypothetical protein	NA	A0A193GYR7	Enterobacter_phage	36.2	6.8e-07
AZF22307.1|3889259_3889598_-	hypothetical protein	NA	A0A088FVG2	Escherichia_phage	47.3	2.0e-19
AZF22308.1|3890145_3890262_+	hypothetical protein	NA	NA	NA	NA	NA
AZF22309.1|3890412_3890730_-	hypothetical protein	NA	NA	NA	NA	NA
AZF22310.1|3890924_3891308_-	antitermination protein Q, putative	NA	A0A1W6JTD2	Pseudomonas_phage	61.0	3.7e-38
AZF22311.1|3891304_3891592_-	hypothetical protein	NA	A0A1W6JTC1	Pseudomonas_phage	61.8	2.1e-25
AZF22312.1|3891584_3892961_-	Replicative DNA helicase	NA	A0A2H4J8N1	uncultured_Caudovirales_phage	58.7	1.4e-148
AZF22313.1|3892957_3893743_-	Bacteriophage-encoded DNA replication protein DnaC-like	NA	A0A0A0YRV1	Pseudomonas_phage	50.4	8.7e-66
AZF22314.1|3893739_3894747_-	Primosomal protein I	NA	A0A1W6JTD5	Pseudomonas_phage	55.6	2.0e-22
AZF22315.1|3894746_3894983_-	hypothetical protein	NA	A0A1W6JTF8	Pseudomonas_phage	73.7	1.9e-16
AZF22316.1|3894979_3895558_-	hypothetical protein	NA	NA	NA	NA	NA
AZF22317.1|3895554_3895929_-	hypothetical protein	NA	NA	NA	NA	NA
AZF22318.1|3896086_3896509_-	hypothetical protein	NA	NA	NA	NA	NA
AZF22319.1|3896598_3896835_-	putative phage-associated protein YdaS	NA	D0UIL8	Aggregatibacter_phage	44.8	1.5e-05
AZF22320.1|3896933_3897359_+	putative phage repressor	NA	A0A2H4JAJ5	uncultured_Caudovirales_phage	44.3	4.2e-06
AZF22321.1|3897856_3898021_-	hypothetical protein	NA	NA	NA	NA	NA
AZF22322.1|3898030_3898252_+	hypothetical protein	NA	NA	NA	NA	NA
AZF22323.1|3898711_3899509_-	Putative antirepressor	NA	G0ZND1	Cronobacter_phage	42.4	2.0e-30
