The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP027711	Pseudomonas chlororaphis subsp. piscium strain ChPhzTR44 chromosome, complete genome	6878216	1317609	1408575	6878216	protease,tRNA,tail,plate	Pseudomonas_phage(44.23%)	95	NA	NA
AZC93937.1|1317609_1318962_+|protease	Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage	protease	NA	NA	NA	NA
AZC93938.1|1319036_1321424_+	Outer membrane protein assembly factor YaeT	NA	NA	NA	NA	NA
AZC93939.1|1321469_1321973_+	Outer membrane chaperone Skp, precursor	NA	NA	NA	NA	NA
AZC93940.1|1321976_1323032_+	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	NA	NA	NA	NA	NA
AZC93941.1|1323141_1323582_+	3-hydroxyacyl-ACP dehydratase	NA	NA	NA	NA	NA
AZC93942.1|1323578_1324355_+	Acyl-ADP--UDP-N- acetylglucosamine O-acyltransferase	NA	NA	NA	NA	NA
AZC93943.1|1324357_1325488_+	Lipid-A-disaccharide synthase	NA	NA	NA	NA	NA
AZC93944.1|1325484_1326132_+	Ribonuclease HII	NA	V5LS49	Emiliania_huxleyi_virus	39.5	4.5e-28
AZC93945.1|1326201_1329726_+	DNA polymerase III alpha subunit	NA	A0A0K1Y906	Streptomyces_phage	37.4	2.4e-195
AZC93946.1|1329866_1330814_+	Acetyl-coenzyme A carboxyl transferase alpha chain	NA	NA	NA	NA	NA
AZC93947.1|1330933_1332262_+|tRNA	tRNA(Ile)-lysidine synthetase	tRNA	NA	NA	NA	NA
AZC93948.1|1332307_1332451_+	hypothetical protein	NA	NA	NA	NA	NA
AZC93949.1|1332536_1334168_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	53.5	6.9e-158
AZC93950.1|1334173_1335019_+	2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase	NA	E3T537	Cafeteria_roenbergensis_virus	42.8	2.7e-49
AZC93951.1|1335176_1336466_+	Enolase	NA	A0A1X9I5Z8	Streptococcus_phage	59.2	9.0e-137
AZC93952.1|1336638_1336917_+	Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage	NA	NA	NA	NA	NA
AZC93953.1|1336913_1337621_+	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
AZC93954.1|1337782_1338679_-	Transcriptional regulator, LysR family, in formaldehyde detoxification operon	NA	NA	NA	NA	NA
AZC93955.1|1338785_1339898_+	S-(hydroxymethyl)glutathione dehydrogenase	NA	E3SJ82	Synechococcus_phage	27.2	1.1e-29
AZC93956.1|1339906_1340752_+	S-formylglutathione hydrolase	NA	NA	NA	NA	NA
AZC93957.1|1340804_1341278_+	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA	NA
AZC93958.1|1341274_1342333_+|tRNA	tRNA pseudouridine(13) synthase	tRNA	NA	NA	NA	NA
AZC93959.1|1342320_1343070_+	5'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	52.6	1.0e-68
AZC93960.1|1343069_1343747_+	Protein-L-isoaspartate O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	52.0	8.9e-43
AZC93961.1|1344037_1344790_+	Murein hydrolase activator NlpD	NA	A0A0S2SXL7	Bacillus_phage	33.3	5.7e-06
AZC93962.1|1344896_1345901_+	RNA polymerase sigma factor RpoS	NA	G8CLC7	Synechococcus_phage	35.8	5.0e-34
AZC93963.1|1346403_1346727_-	4Fe-4S dicluster domain	NA	NA	NA	NA	NA
AZC93964.1|1349644_1350370_+	Transcriptional regulator	NA	B5TK58	Pseudomonas_phage	91.4	1.3e-124
AZC93965.1|1351111_1351693_+	hypothetical protein	NA	NA	NA	NA	NA
AZC93966.1|1351795_1352143_+	Holin	NA	B5TK61	Pseudomonas_phage	87.7	7.7e-51
AZC93967.1|1352309_1353074_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A1W6DX33	Sphingobium_phage	26.3	2.6e-06
AZC93968.1|1353556_1353805_+	hypothetical protein	NA	NA	NA	NA	NA
AZC93969.1|1353913_1354555_+	hypothetical protein	NA	B5TK60	Pseudomonas_phage	55.1	5.2e-61
AZC93970.1|1354796_1355321_+	hypothetical protein	NA	NA	NA	NA	NA
AZC93971.1|1355324_1355933_+|plate	Baseplate assembly protein V	plate	A0A2H4JBW8	uncultured_Caudovirales_phage	61.0	5.7e-49
AZC93972.1|1355946_1356279_+|plate	Baseplate assembly protein W	plate	A0A2H4JI46	uncultured_Caudovirales_phage	69.1	3.6e-37
AZC93973.1|1356275_1357271_+|plate	Phage-related baseplate assembly protein	plate	A0A2H4JC04	uncultured_Caudovirales_phage	63.8	4.3e-110
AZC93974.1|1357267_1358002_+|tail	Phage tail fiber	tail	A0A2H4JDK0	uncultured_Caudovirales_phage	53.5	5.3e-41
AZC93975.1|1357998_1358529_+|tail	Phage tail fiber	tail	B0ZSG1	Halomonas_phage	57.5	2.2e-49
AZC93976.1|1358655_1359438_+	hypothetical protein	NA	NA	NA	NA	NA
AZC93977.1|1359440_1359743_+	Phage protein	NA	Q8H9M8	Vibrio_phage	64.6	1.8e-11
AZC93978.1|1359829_1360051_+	hypothetical protein	NA	NA	NA	NA	NA
AZC93979.1|1360053_1361220_+|tail	Major tail sheath protein	tail	B0ZSG8	Halomonas_phage	57.2	2.5e-125
AZC93980.1|1361219_1361726_+	hypothetical protein	NA	Q6R4W3	Vibrio_virus	35.7	2.6e-23
AZC93981.1|1361852_1362464_+	hypothetical protein	NA	B0ZSH0	Halomonas_phage	36.4	1.5e-25
AZC93982.1|1362460_1362586_+	hypothetical protein	NA	NA	NA	NA	NA
AZC93983.1|1362592_1364800_+	Phage protein	NA	A0A2H4JAA5	uncultured_Caudovirales_phage	49.3	7.2e-09
AZC93984.1|1364799_1365183_+|tail	Unclassified tail protein	tail	A0A2H4JAC8	uncultured_Caudovirales_phage	59.8	4.0e-40
AZC93985.1|1365175_1365388_+|tail	P2-like prophage tail protein X	tail	A0A2H4JGD9	uncultured_Caudovirales_phage	61.4	6.9e-18
AZC93986.1|1365397_1366414_+|tail	Phage tail protein D	tail	A0A2H4JH05	uncultured_Caudovirales_phage	56.9	7.7e-107
AZC93987.1|1366556_1367141_+	hypothetical protein	NA	B5TK65	Pseudomonas_phage	72.0	6.9e-76
AZC93988.1|1367137_1367320_+	Mu-like prophage FluMu protein GP38	NA	B5TK66	Pseudomonas_phage	91.7	2.5e-24
AZC93989.1|1367319_1368816_+|tail	Bacteriophage tail sheath protein	tail	B5TK67	Pseudomonas_phage	90.6	4.6e-257
AZC93990.1|1368882_1369230_+|tail	Phage tail tube protein	tail	B5TK68	Pseudomonas_phage	93.9	2.9e-58
AZC93991.1|1369226_1369523_+|tail	Phage small tail protein E	tail	B5TK69	Pseudomonas_phage	94.9	2.3e-43
AZC93992.1|1369653_1371852_+|tail	Phage tail length tape-measure protein	tail	B5TK70	Pseudomonas_phage	44.9	2.5e-33
AZC93993.1|1371838_1373077_+|tail	Phage tail/DNA circulation protein	tail	B5TK71	Pseudomonas_phage	75.2	1.3e-180
AZC93994.1|1373080_1374121_+|tail	Prophage tail protein	tail	B5TK72	Pseudomonas_phage	82.9	1.3e-162
AZC93995.1|1374185_1374695_+|plate	Prophage baseplate assembly protein V	plate	B5TK73	Pseudomonas_phage	89.3	5.8e-79
AZC93996.1|1374694_1375093_+	Bacteriophage protein GP46	NA	B5TK74	Pseudomonas_phage	90.2	7.5e-66
AZC93997.1|1375082_1376123_+	Phage FluMu protein gp47	NA	B5TK75	Pseudomonas_phage	87.3	5.2e-167
AZC93998.1|1376110_1376710_+|tail	Prophage tail protein	tail	B5TK76	Pseudomonas_phage	91.5	4.2e-105
AZC93999.1|1376721_1377873_+|tail	Prophage tail fiber protein	tail	B5TK77	Pseudomonas_phage	71.2	2.3e-155
AZC94000.1|1377869_1378376_+|tail	putative tail fiber assembly-like protein	tail	B5TK78	Pseudomonas_phage	62.6	2.4e-45
AZC94001.1|1378751_1380305_+|tail	Prophage tail fiber protein	tail	A4PE45	Ralstonia_virus	53.0	3.4e-37
AZC94002.1|1380306_1380777_+	hypothetical protein	NA	A0A2H4EXG4	Aeromonas_phage	34.2	4.2e-07
AZC94003.1|1380816_1380957_+	Lytic enzyme	NA	B5TK83	Pseudomonas_phage	67.4	1.9e-08
AZC94004.1|1381034_1382099_+|tail	Prophage tail fiber protein	tail	B5TK79	Pseudomonas_phage	58.3	1.0e-114
AZC94005.1|1382105_1382708_+|tail	Putative tail fiber assembly protein p37	tail	B5TK80	Pseudomonas_phage	45.3	4.6e-43
AZC94006.1|1382729_1383293_+	Lytic enzyme	NA	B5TK83	Pseudomonas_phage	83.3	9.9e-88
AZC94007.1|1383274_1383811_+	hypothetical protein	NA	B5TK84	Pseudomonas_phage	71.9	4.0e-62
AZC94008.1|1383893_1384394_+	Nicotinamide-nucleotide amidase	NA	B5TK85	Pseudomonas_phage	86.7	4.7e-73
AZC94009.1|1384477_1385530_+	RecA protein	NA	A0A0S2MVG1	Bacillus_phage	63.0	4.4e-113
AZC94010.1|1385538_1386006_+	Regulatory protein RecX	NA	NA	NA	NA	NA
AZC94011.1|1386051_1387167_-	Decarboxylase family protein	NA	NA	NA	NA	NA
AZC94012.1|1387650_1387845_+	hypothetical protein	NA	NA	NA	NA	NA
AZC94013.1|1387846_1388269_-	Putative NADPH-quinone reductase (modulator of drug activity B)	NA	NA	NA	NA	NA
AZC94014.1|1388458_1389169_+	putative conserved protein YfiP, contains DTW domain	NA	NA	NA	NA	NA
AZC94015.1|1389502_1390153_+	Transcriptional regulator, LuxR family	NA	NA	NA	NA	NA
AZC94016.1|1390229_1390592_+	Diacylglycerol kinase	NA	NA	NA	NA	NA
AZC94017.1|1390588_1391515_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZC94018.1|1391650_1392430_+	Ferredoxin--NADP(+) reductase	NA	NA	NA	NA	NA
AZC94019.1|1392502_1393231_-	S-adenosylmethionine-dependent methyltransferase YaeB	NA	NA	NA	NA	NA
AZC94020.1|1393284_1394055_-	Rhamnolipid biosynthesis 3-oxoacyl-ACP reductase RhlG	NA	NA	NA	NA	NA
AZC94021.1|1394188_1394650_-	Uncharacterized protein YehS	NA	Q9EYF4	Enterobacteria_phage	51.3	8.5e-37
AZC94022.1|1394716_1395427_-	Ribosomal large subunit pseudouridine synthase F	NA	NA	NA	NA	NA
AZC94023.1|1395509_1395983_-	Acetyltransferase	NA	NA	NA	NA	NA
AZC94024.1|1396089_1397427_-	Ribosomal protein S12p Asp88 methylthiotransferase	NA	NA	NA	NA	NA
AZC94025.1|1397758_1399660_+	Kup system potassium uptake protein	NA	M1HZV6	Acanthocystis_turfacea_Chlorella_virus	34.9	2.2e-78
AZC94026.1|1399863_1401159_-	Alanylphosphatidylglycerol hydrolase, periplasmic	NA	NA	NA	NA	NA
AZC94027.1|1401158_1403807_-	Alanylphosphatidylglycerol synthase	NA	NA	NA	NA	NA
AZC94028.1|1404199_1404343_-	hypothetical protein	NA	NA	NA	NA	NA
AZC94029.1|1404746_1405811_+	DNA polymerase IV	NA	NA	NA	NA	NA
AZC94030.1|1405888_1406842_-	putative lipoprotein	NA	NA	NA	NA	NA
AZC94031.1|1406859_1408575_-|tRNA	Prolyl-tRNA synthetase, bacterial type	tRNA	NA	NA	NA	NA
>prophage 2
CP027711	Pseudomonas chlororaphis subsp. piscium strain ChPhzTR44 chromosome, complete genome	6878216	2803060	2811716	6878216	tail,plate	uncultured_Caudovirales_phage(66.67%)	10	NA	NA
AZC95310.1|2803060_2804131_-	Phage FluMu protein gp47	NA	A0A0M3LQN4	Mannheimia_phage	40.7	4.5e-57
AZC95311.1|2804132_2804363_-	Bacteriophage protein GP46	NA	A0A2H4JDR8	uncultured_Caudovirales_phage	57.9	3.5e-15
AZC95312.1|2804559_2805303_-	hypothetical protein	NA	NA	NA	NA	NA
AZC95313.1|2805372_2805933_-|plate	Prophage baseplate assembly protein V	plate	A0A2H4JFE0	uncultured_Caudovirales_phage	62.4	1.2e-61
AZC95314.1|2805932_2807060_-|tail	Prophage tail protein	tail	A0A2H4J9E6	uncultured_Caudovirales_phage	72.8	6.6e-160
AZC95315.1|2807049_2808375_-|tail	Phage tail/DNA circulation protein	tail	A0A2H4JGT4	uncultured_Caudovirales_phage	57.3	4.0e-140
AZC95316.1|2808435_2809998_-	Transposase	NA	A0A2H4JEQ4	uncultured_Caudovirales_phage	61.6	1.2e-156
AZC95317.1|2810035_2810152_-	Phage protein	NA	L7P804	Pseudomonas_phage	80.0	3.0e-07
AZC95318.1|2810478_2810817_-	Phage DNA binding protein	NA	A0A2H4J3B6	uncultured_Caudovirales_phage	62.0	3.4e-27
AZC95319.1|2811059_2811716_+	Phage repressor	NA	A0A0A1IWY4	Pseudomonas_phage	64.2	1.4e-77
>prophage 3
CP027711	Pseudomonas chlororaphis subsp. piscium strain ChPhzTR44 chromosome, complete genome	6878216	4360467	4366724	6878216	tRNA	uncultured_Caudovirales_phage(83.33%)	8	NA	NA
AZC96644.1|4360467_4360860_+|tRNA	tRNA 5-methylaminomethyl-2-thiouridine synthase subunit TusD	tRNA	A0A2H4JA39	uncultured_Caudovirales_phage	83.8	2.5e-58
AZC96645.1|4360861_4361224_+|tRNA	tRNA 5-methylaminomethyl-2-thiouridine synthase subunit TusC	tRNA	A0A2H4J8C0	uncultured_Caudovirales_phage	74.2	4.3e-44
AZC96646.1|4361223_4361523_+|tRNA	tRNA 5-methylaminomethyl-2-thiouridine synthase subunit TusB	tRNA	A0A2H4JG28	uncultured_Caudovirales_phage	70.7	4.8e-33
AZC96647.1|4361519_4361855_+|tRNA	tRNA 2-thiouridine synthesis protein TusE	tRNA	A0A2H4J8B6	uncultured_Caudovirales_phage	82.0	1.9e-46
AZC96648.1|4361851_4362853_+	Anthranilate phosphoribosyltransferase like	NA	A0A2H4JBY5	uncultured_Caudovirales_phage	84.8	5.5e-166
AZC96649.1|4362942_4363950_+	Glutathione S-transferase, omega	NA	NA	NA	NA	NA
AZC96650.1|4364048_4365443_-	Precorrin-2 oxidase	NA	NA	NA	NA	NA
AZC96651.1|4365443_4366724_-|tRNA	Seryl-tRNA synthetase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	55.1	2.1e-101
>prophage 4
CP027711	Pseudomonas chlororaphis subsp. piscium strain ChPhzTR44 chromosome, complete genome	6878216	4521375	4532812	6878216	terminase	Pseudomonas_phage(64.29%)	19	NA	NA
AZC96791.1|4521375_4521633_-	Phage protein	NA	A0A125RNP3	Pseudomonas_phage	69.5	9.5e-22
AZC96792.1|4521629_4522001_-	hypothetical protein	NA	J7HXL1	Pseudomonas_phage	44.9	2.4e-18
AZC96793.1|4522000_4522426_-	Cell wall hydrolase	NA	A0A1B0VMI2	Pseudomonas_phage	85.8	7.7e-69
AZC96794.1|4522482_4525479_-	hypothetical protein	NA	A0A286S259	Klebsiella_phage	41.8	7.6e-211
AZC96795.1|4525475_4525856_-	hypothetical protein	NA	A0A286S2A6	Klebsiella_phage	51.6	1.9e-34
AZC96796.1|4525852_4526869_-|terminase	Phage terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	72.6	1.6e-88
AZC96797.1|4526855_4527317_-	Phage protein	NA	A0A1B0VMH2	Pseudomonas_phage	78.1	7.9e-51
AZC96798.1|4527349_4527973_-	hypothetical protein	NA	A0A1B0VRJ1	Pseudomonas_phage	87.4	8.3e-104
AZC96799.1|4527982_4528234_-	hypothetical protein	NA	NA	NA	NA	NA
AZC96800.1|4528230_4528422_-	hypothetical protein	NA	NA	NA	NA	NA
AZC96801.1|4528421_4528652_-	NAD/FAD-utilizing enzyme	NA	A0A1S6UB66	Serratia_phage	63.4	2.2e-17
AZC96802.1|4528711_4529008_-	hypothetical protein	NA	V5K3F8	Pseudomonas_phage	37.9	5.1e-11
AZC96803.1|4529012_4529255_-	hypothetical protein	NA	A0A1B0VME7	Pseudomonas_phage	63.2	1.5e-08
AZC96804.1|4529497_4529986_+	DNA-cytosine methyltransferase	NA	A0A2I7QRH3	Vibrio_phage	42.6	4.2e-26
AZC96805.1|4529982_4530213_-	hypothetical protein	NA	A0A1B0VP27	Pseudomonas_phage	77.3	2.7e-28
AZC96806.1|4530286_4530748_+	hypothetical protein	NA	NA	NA	NA	NA
AZC96807.1|4530920_4531601_+	hypothetical protein	NA	NA	NA	NA	NA
AZC96808.1|4531883_4532249_+	hypothetical protein	NA	NA	NA	NA	NA
AZC96809.1|4532245_4532812_+	Phage protein	NA	W5S7T0	Pseudomonas_phage	54.7	1.2e-48
