The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP033911	Mycobacterium avium subsp. paratuberculosis strain MAPK_JB16/15 chromosome, complete genome	4838766	979002	1043730	4838766	holin,tRNA,protease,transposase	uncultured_Mediterranean_phage(17.65%)	59	NA	NA
AZB16001.1|979002_980196_+|protease	serine protease	protease	A0A1B1IRH0	uncultured_Mediterranean_phage	25.0	2.6e-05
AZB12805.1|980188_981154_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZB12806.1|981154_981694_-|holin	phage holin family protein	holin	NA	NA	NA	NA
AZB12807.1|981914_982586_+|protease	serine protease	protease	NA	NA	NA	NA
AZB16002.1|982677_984630_-	acetate--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	39.4	5.8e-87
AZB12808.1|984744_985287_+	DUF4232 domain-containing protein	NA	NA	NA	NA	NA
AZB12809.1|985371_986997_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZB12810.1|986998_987925_+	ABC transporter permease	NA	NA	NA	NA	NA
AZB12811.1|987917_988793_+	ABC transporter permease	NA	NA	NA	NA	NA
AZB16003.1|988789_990436_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	28.0	8.0e-13
AZB12812.1|990425_991184_+	oxidoreductase	NA	NA	NA	NA	NA
AZB12813.1|991649_992507_-	HAD-IB family hydrolase	NA	NA	NA	NA	NA
AZB12814.1|993019_994075_+	helicase	NA	NA	NA	NA	NA
AZB12815.1|994071_995247_+	TadA family conjugal transfer-associated ATPase	NA	NA	NA	NA	NA
AZB12816.1|995243_996047_+	hypothetical protein	NA	NA	NA	NA	NA
AZB16004.1|996069_996657_+	type II secretion system F family protein	NA	NA	NA	NA	NA
AZB12817.1|996675_996876_+	DUF4244 domain-containing protein	NA	NA	NA	NA	NA
AZB16006.1|996935_997202_+	pilus biosynthesis protein TadE	NA	NA	NA	NA	NA
AZB16005.1|997158_997527_+	helicase	NA	NA	NA	NA	NA
AZB12818.1|997523_998561_-	hypothetical protein	NA	NA	NA	NA	NA
AZB12819.1|998692_1001023_-	DEAD/DEAH box helicase	NA	A0A1B1IUF6	uncultured_Mediterranean_phage	27.1	5.1e-05
AZB16007.1|1001271_1001475_+	cold-shock protein	NA	A0A1X9IGI9	Lactococcus_phage	56.2	2.0e-14
AZB12820.1|1001663_1002254_+	hypothetical protein	NA	NA	NA	NA	NA
AZB12821.1|1002458_1005257_+	type I DNA topoisomerase	NA	A0A2K9L5F8	Tupanvirus	30.4	1.2e-98
AZB12822.1|1005253_1006915_-	adenylate/guanylate cyclase domain-containing protein	NA	A0A1B1IWY2	uncultured_Mediterranean_phage	32.8	8.4e-18
AZB12823.1|1007012_1008218_+	DNA polymerase III subunit delta'	NA	NA	NA	NA	NA
AZB12824.1|1008445_1009633_+|transposase	IS481-like element ISMav5 family transposase	transposase	NA	NA	NA	NA
AZB12825.1|1009787_1011596_-	hypothetical protein	NA	NA	NA	NA	NA
AZB12826.1|1011561_1012503_+	NAD-dependent epimerase/dehydratase family protein	NA	A0A2K9L0I7	Tupanvirus	34.8	2.7e-37
AZB12827.1|1012499_1012841_-	DUF2304 domain-containing protein	NA	NA	NA	NA	NA
AZB12828.1|1012837_1013539_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
AZB12829.1|1013574_1014825_-	hypothetical protein	NA	NA	NA	NA	NA
AZB12830.1|1014952_1016041_+	DUF475 domain-containing protein	NA	A0A172Q0Y5	Acinetobacter_phage	41.3	1.1e-53
AZB12831.1|1016021_1016510_-	inorganic diphosphatase	NA	A0A2H4J8U1	uncultured_Caudovirales_phage	45.1	9.6e-31
AZB12832.1|1016631_1018017_+	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
AZB12833.1|1018013_1019087_+	hydrolase	NA	NA	NA	NA	NA
AZB12834.1|1019065_1020028_+|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	NA	NA	NA	NA
AZB12835.1|1020033_1020690_+	hypoxanthine phosphoribosyltransferase	NA	A0A1V0SEQ1	Hokovirus	26.4	2.2e-06
AZB12836.1|1020697_1021447_-	DUF541 domain-containing protein	NA	NA	NA	NA	NA
AZB12837.1|1021763_1022063_+	PE family protein	NA	NA	NA	NA	NA
AZB12838.1|1024826_1025840_-	alcohol dehydrogenase	NA	NA	NA	NA	NA
AZB12839.1|1025839_1027027_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
AZB12840.1|1027023_1027953_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZB12841.1|1028092_1028506_+	VOC family protein	NA	NA	NA	NA	NA
AZB12842.1|1028540_1028765_+	hypothetical protein	NA	NA	NA	NA	NA
AZB12843.1|1028778_1031178_+|protease	ATP-dependent zinc metalloprotease FtsH	protease	E5EQU5	Bathycoccus_sp._RCC1105_virus	44.9	4.3e-108
AZB12844.1|1031194_1031809_+	GTP cyclohydrolase I FolE	NA	E7DN69	Pneumococcus_phage	53.9	6.6e-45
AZB12845.1|1031828_1032632_+	dihydropteroate synthase	NA	S4W084	Pandoravirus	33.0	3.9e-21
AZB12846.1|1032624_1033026_+	dihydroneopterin aldolase	NA	NA	NA	NA	NA
AZB12847.1|1033134_1033683_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
AZB12848.1|1033682_1034159_+	DUF3180 domain-containing protein	NA	NA	NA	NA	NA
AZB12849.1|1034246_1035635_+	hypothetical protein	NA	NA	NA	NA	NA
AZB12850.1|1035750_1036662_+	DUF2520 domain-containing protein	NA	NA	NA	NA	NA
AZB12851.1|1036658_1037585_+	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
AZB12852.1|1037584_1038016_+	aspartate 1-decarboxylase	NA	NA	NA	NA	NA
AZB12853.1|1038018_1038834_+	type III pantothenate kinase	NA	NA	NA	NA	NA
AZB12854.1|1038880_1040380_+|tRNA	lysine--tRNA ligase	tRNA	A0A2K9KZX5	Tupanvirus	36.6	3.3e-74
AZB12855.1|1040523_1040862_+	Lsr2 family protein	NA	A0A2D1GPL8	Mycobacterium_phage	41.5	2.1e-16
AZB12856.1|1041198_1043730_+|protease	ATP-dependent Clp protease ATP-binding subunit	protease	K4FB40	Cronobacter_phage	39.7	3.0e-128
>prophage 2
CP033911	Mycobacterium avium subsp. paratuberculosis strain MAPK_JB16/15 chromosome, complete genome	4838766	4007535	4014107	4838766		Bacillus_phage(33.33%)	8	NA	NA
AZB15259.1|4007535_4009701_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	V9VI16	Lactococcus_phage	51.6	5.7e-208
AZB15260.1|4009670_4010123_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A142F1R4	Bacillus_phage	37.7	3.7e-13
AZB15261.1|4010165_4010405_-	redoxin NrdH	NA	V5UN81	Mycobacterium_phage	64.5	2.0e-21
AZB15262.1|4010480_4010747_-	hypothetical protein	NA	NA	NA	NA	NA
AZB15263.1|4010934_4011489_-	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL77	Lactobacillus_phage	33.6	5.4e-06
AZB15264.1|4011582_4012197_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZB15265.1|4012196_4013240_+	DNA polymerase IV	NA	F1C5A5	Cronobacter_phage	27.9	1.1e-18
AZB15266.1|4013174_4014107_-	SDR family oxidoreductase	NA	W8CYX9	Bacillus_phage	35.9	5.9e-05
