The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP033822	Streptococcus agalactiae strain FDAARGOS_512 chromosome, complete genome	2134138	88679	96634	2134138		Streptococcus_phage(66.67%)	10	NA	NA
AYZ22440.1|88679_89417_+	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	44.5	2.9e-39
AYZ22441.1|89419_91102_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.8	1.2e-35
AYZ22442.1|91730_91901_+	DNA recombinase	NA	A0A1X9I6E4	Streptococcus_phage	98.2	3.7e-22
AYZ22443.1|92286_93504_+	macrolide efflux MFS transporter Mef(A)	NA	A0A2K5B2B5	Erysipelothrix_phage	90.6	5.1e-198
AYZ22444.1|93623_95087_+	ABC-F type ribosomal protection protein Msr(D)	NA	A0A1B0RXA0	Streptococcus_phage	97.3	3.7e-251
AYZ22445.1|95204_95504_-	hypothetical protein	NA	A0A1B0RX98	Streptococcus_phage	96.0	1.8e-48
AYZ22446.1|95490_95859_-	hypothetical protein	NA	A0A1B0RXA8	Streptococcus_phage	97.5	1.1e-58
AYZ22447.1|95871_96207_-	imsC-like protein	NA	NA	NA	NA	NA
AYZ22448.1|96203_96449_-	hypothetical protein	NA	A0A1B0RXA7	Streptococcus_phage	98.8	2.6e-37
AYZ22449.1|96445_96634_-	type VI secretion protein ImpB	NA	Q6DMX4	Streptococcus_phage	90.7	1.5e-13
>prophage 2
CP033822	Streptococcus agalactiae strain FDAARGOS_512 chromosome, complete genome	2134138	116346	139548	2134138	transposase,integrase	Streptococcus_phage(84.21%)	26	108541:108555	124176:124190
108541:108555	attL	ACTTGGTTATCTTTT	NA	NA	NA	NA
AYZ22465.1|116346_117909_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	31.7	4.9e-20
AYZ22466.1|117976_119170_-|integrase	site-specific integrase	integrase	A0A0S2MV79	Bacillus_phage	34.0	2.4e-43
AYZ22467.1|119196_119397_-	DUF3173 domain-containing protein	NA	NA	NA	NA	NA
AYZ22468.1|119476_119680_+	conjugal transfer protein	NA	NA	NA	NA	NA
AYZ22469.1|119892_120123_-	helix-turn-helix domain-containing protein	NA	A0A1S5SEX1	Streptococcus_phage	78.9	7.9e-28
AYZ22470.1|120119_120602_-	sigma-70 family RNA polymerase sigma factor	NA	A0A1S5SEW0	Streptococcus_phage	70.0	1.2e-49
AYZ22471.1|121073_121427_+	XRE family transcriptional regulator	NA	A0A1S5SFA6	Streptococcus_phage	90.5	1.3e-53
AYZ22472.1|121484_121652_-	conjugal transfer protein	NA	D0R0F6	Streptococcus_phage	62.0	2.3e-13
AYZ22473.1|121770_123690_-	tetracycline resistance ribosomal protection protein Tet(M)	NA	A0A1S5SF82	Streptococcus_phage	97.2	0.0e+00
AYZ22474.1|123705_123792_-	tetracycline resistance determinant leader peptide	NA	NA	NA	NA	NA
AYZ24351.1|124066_125005_-	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	56.6	1.1e-83
124176:124190	attR	ACTTGGTTATCTTTT	NA	NA	NA	NA
AYZ22475.1|125012_126035_-	peptidase P60	NA	A0A1S5SEZ8	Streptococcus_phage	75.5	1.4e-132
AYZ22476.1|126031_128059_-	hypothetical protein	NA	A0A1S5SF30	Streptococcus_phage	65.7	1.8e-195
AYZ22477.1|128055_130509_-	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	79.1	0.0e+00
AYZ22478.1|130492_130888_-	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	75.0	1.7e-49
AYZ22479.1|130958_131984_-	hypothetical protein	NA	NA	NA	NA	NA
AYZ22480.1|132062_133229_-|transposase	IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	76.0	1.2e-106
AYZ22481.1|133391_133892_-	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	61.1	5.4e-53
AYZ22482.1|133953_134733_-	hypothetical protein	NA	NA	NA	NA	NA
AYZ22483.1|134774_134996_-	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	93.2	3.1e-29
AYZ22484.1|134992_135265_-	hypothetical protein	NA	NA	NA	NA	NA
AYZ22485.1|135261_136446_-	XRE family transcriptional regulator	NA	A0A1S5SEX3	Streptococcus_phage	67.6	1.0e-158
AYZ22486.1|136627_138031_-	DNA translocase FtsK	NA	A0A1S5SFB5	Streptococcus_phage	67.0	1.5e-177
AYZ22487.1|138052_138826_-	hypothetical protein	NA	NA	NA	NA	NA
AYZ22488.1|138835_139213_-	DUF961 domain-containing protein	NA	A0A1S5SF96	Streptococcus_phage	77.2	5.6e-47
AYZ22489.1|139233_139548_-	DUF961 domain-containing protein	NA	A0A1S5SF38	Streptococcus_phage	76.7	7.0e-43
>prophage 3
CP033822	Streptococcus agalactiae strain FDAARGOS_512 chromosome, complete genome	2134138	343407	445896	2134138	tRNA,head,terminase,holin,protease,portal,capsid,transposase,tail	Streptococcus_phage(70.59%)	95	NA	NA
AYZ22666.1|343407_343881_+|tRNA	aminoacyl-tRNA deacylase	tRNA	NA	NA	NA	NA
AYZ22667.1|343902_344544_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
AYZ22668.1|344579_345482_-	HAD family hydrolase	NA	NA	NA	NA	NA
AYZ22669.1|345656_347147_+|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	38.5	5.8e-87
AYZ22670.1|347221_347692_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	52.7	1.3e-40
AYZ22671.1|347706_348900_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	50.8	3.0e-110
AYZ22672.1|348917_349568_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	40.9	2.9e-35
AYZ22673.1|349548_350658_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	37.2	8.8e-56
AYZ22674.1|351385_352726_+	divalent metal cation transporter	NA	NA	NA	NA	NA
AYZ22675.1|352826_353624_-	hypothetical protein	NA	NA	NA	NA	NA
AYZ22676.1|353747_353960_-	hypothetical protein	NA	NA	NA	NA	NA
AYZ22677.1|354086_355373_-|protease	collagenase-like protease	protease	Q6DW11	Phage_TP	32.4	1.9e-41
AYZ22678.1|355502_356429_-	U32 family peptidase	NA	NA	NA	NA	NA
AYZ22679.1|356769_357045_+	DUF3270 family protein	NA	NA	NA	NA	NA
AYZ22680.1|357085_357517_-	YtxH domain-containing protein	NA	NA	NA	NA	NA
AYZ22681.1|357513_357912_-	DUF948 domain-containing protein	NA	NA	NA	NA	NA
AYZ22682.1|357926_358700_-	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA	NA
AYZ22683.1|358692_359628_-	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
AYZ22684.1|359743_359878_-	hypothetical protein	NA	NA	NA	NA	NA
AYZ22685.1|359855_360119_-	PspC domain-containing protein	NA	NA	NA	NA	NA
AYZ24354.1|360199_360628_-	SprT family protein	NA	U5J9G1	Bacillus_phage	26.2	2.1e-05
AYZ24353.1|360620_362783_-	RNA-binding transcriptional accessory protein	NA	NA	NA	NA	NA
AYZ22686.1|362886_363930_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
AYZ22687.1|364062_364191_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
AYZ22688.1|364196_365099_+	permease	NA	NA	NA	NA	NA
AYZ22689.1|365098_365911_+	TIGR03943 family protein	NA	NA	NA	NA	NA
AYZ22690.1|365947_367558_-	signal recognition particle-docking protein FtsY	NA	NA	NA	NA	NA
AYZ22691.1|367557_368382_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
AYZ22692.1|368381_369179_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
AYZ22693.1|369298_370864_-	recombinase family protein	NA	Q6DMS5	Streptococcus_phage	61.5	8.0e-180
AYZ22694.1|370866_372075_-	recombinase family protein	NA	Q6DMS6	Streptococcus_phage	49.7	1.8e-102
AYZ22695.1|372289_372691_-	RNA polymerase subunit sigma-70	NA	NA	NA	NA	NA
AYZ22696.1|372800_374270_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A1X9I678	Streptococcus_phage	78.9	1.8e-226
AYZ22697.1|374271_374676_-|holin	holin	holin	D0R0E9	Streptococcus_phage	74.8	3.0e-46
AYZ22698.1|374693_376550_-	hypothetical protein	NA	Q6DMS9	Streptococcus_phage	73.3	2.5e-257
AYZ22699.1|376562_379478_-	carbamoylsarcosine amidase	NA	Q6DMT0	Streptococcus_phage	64.8	0.0e+00
AYZ22700.1|379477_380203_-|tail	phage tail protein	tail	Q6DMT1	Streptococcus_phage	57.9	1.4e-81
AYZ22701.1|380199_383319_-|tail	phage tail tape measure protein	tail	Q6DMT2	Streptococcus_phage	76.7	2.0e-254
AYZ22702.1|383501_383921_-	hypothetical protein	NA	A0A1X9I691	Streptococcus_phage	76.3	1.3e-55
AYZ22703.1|383932_384502_-|tail	phage tail protein	tail	A0A1B0RXE2	Streptococcus_phage	93.6	1.5e-96
AYZ22704.1|384504_384831_-	hypothetical protein	NA	M1Q1Z4	Streptococcus_phage	69.4	8.3e-39
AYZ22705.1|384839_385208_-	HK97 gp10 family phage protein	NA	Q6DMT7	Streptococcus_phage	62.9	7.0e-34
AYZ22706.1|385200_385539_-|head,tail	head-tail adaptor protein	head,tail	A0A1B0RXJ6	Streptococcus_phage	70.5	4.3e-38
AYZ22707.1|385538_385796_-|head,tail	phage gp6-like head-tail connector protein	head,tail	D0R0D7	Streptococcus_phage	78.8	9.5e-30
AYZ22708.1|385792_387001_-|capsid	phage major capsid protein	capsid	E4ZFM5	Streptococcus_phage	91.3	1.0e-211
AYZ22709.1|387013_387712_-|protease	Clp protease ClpP	protease	A0A1B0RXE1	Streptococcus_phage	83.6	5.8e-106
AYZ22710.1|387704_389000_-|portal	phage portal protein	portal	A0A1B0RXD8	Streptococcus_phage	89.3	8.0e-226
AYZ22711.1|389068_389272_-	hypothetical protein	NA	NA	NA	NA	NA
AYZ22712.1|389341_389680_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
AYZ22713.1|389672_389966_-	antitoxin	NA	NA	NA	NA	NA
AYZ22714.1|390032_391625_-|terminase	terminase large subunit	terminase	A0A1B0RXJ8	Streptococcus_phage	95.8	6.0e-308
AYZ22715.1|391621_392095_-|terminase	phage terminase small subunit P27 family	terminase	A0A1X9I6K0	Streptococcus_phage	96.8	1.5e-84
AYZ22716.1|392143_392593_-	DUF4314 domain-containing protein	NA	A0A1X9I6A3	Streptococcus_phage	67.1	4.1e-20
AYZ22717.1|392594_392846_-	hypothetical protein	NA	M1PG57	Streptococcus_phage	59.3	5.8e-16
AYZ22718.1|392907_394188_-	DNA (cytosine-5-)-methyltransferase	NA	M1NSK8	Streptococcus_phage	92.3	2.2e-231
AYZ22719.1|394184_395441_-	DNA modification methylase	NA	A0A1B0RXE5	Streptococcus_phage	90.9	3.0e-225
AYZ22720.1|395412_395868_-	helix-turn-helix domain-containing protein	NA	M1Q209	Streptococcus_phage	50.3	1.0e-42
AYZ24355.1|396156_396522_-	HNH endonuclease	NA	A0A1B0RXJ3	Streptococcus_phage	88.4	3.2e-63
AYZ22721.1|397608_397791_-	hypothetical protein	NA	A0A1B0RXC3	Streptococcus_phage	86.7	1.7e-20
AYZ22722.1|397985_398462_-	hypothetical protein	NA	A0A1B0RXB9	Streptococcus_phage	84.2	3.2e-71
AYZ22723.1|398454_399831_-	DEAD/DEAH box helicase	NA	A0A1X9I6B0	Streptococcus_phage	86.7	1.6e-232
AYZ22724.1|399811_400093_-	VRR-NUC domain-containing protein	NA	M1PFY8	Streptococcus_phage	84.9	2.2e-40
AYZ22725.1|400373_402662_-	DNA primase	NA	A0A1B0RXC5	Streptococcus_phage	87.9	0.0e+00
AYZ22726.1|403020_403344_+	hypothetical protein	NA	D0R0B4	Streptococcus_phage	72.9	8.8e-33
AYZ22727.1|403336_404458_+	DUF2800 domain-containing protein	NA	M1Q218	Streptococcus_phage	90.9	3.5e-201
AYZ22728.1|404462_405026_+	DUF2815 family protein	NA	A0A1B0RXA9	Streptococcus_phage	92.8	1.5e-91
AYZ22729.1|405044_405212_+	hypothetical protein	NA	E4ZFK2	Streptococcus_phage	56.9	4.3e-07
AYZ22730.1|405260_407216_+	hypothetical protein	NA	E4ZFK1	Streptococcus_phage	86.2	0.0e+00
AYZ22731.1|407277_407820_-	hypothetical protein	NA	NA	NA	NA	NA
AYZ22732.1|407981_408578_-	hypothetical protein	NA	A0A1B0RXB3	Streptococcus_phage	27.9	4.6e-11
AYZ22733.1|409010_410135_+	hypothetical protein	NA	NA	NA	NA	NA
AYZ22734.1|410134_410359_+	hypothetical protein	NA	NA	NA	NA	NA
AYZ24356.1|411129_412008_+	DUF2326 domain-containing protein	NA	NA	NA	NA	NA
AYZ22735.1|411997_412207_+	helix-turn-helix domain-containing protein	NA	A0A2K5B263	Erysipelothrix_phage	58.5	4.8e-16
AYZ22736.1|412465_412816_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA	NA
AYZ22737.1|412869_413055_+|transposase	transposase	transposase	NA	NA	NA	NA
AYZ22738.1|413026_414298_+|transposase	IS66 family transposase	transposase	NA	NA	NA	NA
AYZ22739.1|424492_425743_+	YSIRK-targeted surface antigen transcriptional regulator	NA	NA	NA	NA	NA
AYZ22740.1|426051_426684_+	hypothetical protein	NA	NA	NA	NA	NA
AYZ22741.1|427251_428553_-	hypothetical protein	NA	NA	NA	NA	NA
AYZ22742.1|428809_429328_-	ClbS/DfsB family four-helix bundle protein	NA	NA	NA	NA	NA
AYZ22743.1|430206_433746_-	chromosome segregation protein SMC	NA	NA	NA	NA	NA
AYZ22744.1|433753_434440_-	ribonuclease 3	NA	A0A167RGU4	Powai_lake_megavirus	29.9	3.3e-21
AYZ22745.1|434614_434983_-	DUF454 domain-containing protein	NA	NA	NA	NA	NA
AYZ22746.1|434985_435795_-	MBL fold metallo-hydrolase	NA	A0A0C5AJ83	Bacteriophage	37.6	2.5e-39
AYZ22747.1|435798_437148_-	cell wall metabolism sensor histidine kinase VicK	NA	W8CYF6	Bacillus_phage	33.8	2.7e-35
AYZ22748.1|437140_437851_-	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	38.5	3.1e-38
AYZ22749.1|438190_438946_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	41.7	4.3e-38
AYZ22750.1|438957_439758_+	glutamine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AYZ22751.1|439770_440466_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AYZ22752.1|440477_441128_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AYZ22753.1|441176_441743_-	peptidase	NA	NA	NA	NA	NA
AYZ22754.1|441909_442929_-	DUF3114 domain-containing protein	NA	NA	NA	NA	NA
AYZ22755.1|443026_443731_-	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	34.1	5.6e-32
AYZ22756.1|443952_445896_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	37.9	1.5e-119
>prophage 4
CP033822	Streptococcus agalactiae strain FDAARGOS_512 chromosome, complete genome	2134138	515951	569365	2134138	head,terminase,holin,portal,capsid,transposase,tail,integrase	Streptococcus_phage(66.15%)	79	521182:521199	567055:567072
AYZ22820.1|515951_516608_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.8	2.2e-22
AYZ22821.1|516617_517895_-	ABC transporter permease	NA	NA	NA	NA	NA
AYZ22822.1|518637_518799_+	TM2 domain-containing protein	NA	NA	NA	NA	NA
AYZ22823.1|518971_519181_-	hypothetical protein	NA	A0A0C5AEA5	Paenibacillus_phage	55.4	1.4e-15
AYZ22824.1|519306_519564_-|transposase	IS3 family transposase	transposase	A0A0C5AEA5	Paenibacillus_phage	43.5	5.8e-11
AYZ22825.1|519588_519789_-|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
AYZ22826.1|519950_520355_-|transposase	transposase	transposase	NA	NA	NA	NA
521182:521199	attL	ATGTCCCCTGCCGGAATC	NA	NA	NA	NA
AYZ22827.1|521319_521499_-	Paratox	NA	J7KIW4	Streptococcus_phage	86.2	2.1e-20
AYZ22828.1|521915_522086_+	hypothetical protein	NA	A0A286QNA2	Streptococcus_phage	63.8	1.1e-07
AYZ22829.1|522126_522327_-	CsbD family protein	NA	J7KJ36	Streptococcus_phage	100.0	2.9e-26
AYZ22830.1|522436_522736_-	DUF4325 domain-containing protein	NA	J7KJ12	Streptococcus_phage	100.0	3.8e-46
AYZ22831.1|522729_523626_-	ATP-binding protein	NA	J7KDG8	Streptococcus_phage	100.0	1.8e-168
AYZ22832.1|523821_524541_-	CHAP domain-containing protein	NA	A0A1U9WRD0	Streptococcus_virus	70.3	7.2e-59
AYZ22833.1|524542_524878_-|holin	phage holin	holin	A0A1P8VVK6	Streptococcus_phage	72.1	2.1e-37
AYZ22834.1|524879_525182_-	hypothetical protein	NA	X2KT07	Streptococcus_phage	59.6	2.2e-25
AYZ22835.1|525194_525407_-	hypothetical protein	NA	J7KDP6	Streptococcus_phage	60.0	2.1e-14
AYZ22836.1|525381_525708_-	DUF1366 domain-containing protein	NA	J7KDI9	Streptococcus_phage	68.2	1.3e-31
AYZ22837.1|525721_527734_-	hypothetical protein	NA	J7KC14	Streptococcus_phage	49.6	3.2e-165
AYZ24358.1|527744_531551_-	CHAP domain-containing protein	NA	J7KBT9	Streptococcus_phage	80.0	0.0e+00
AYZ22838.1|531562_533137_-|tail	phage tail protein	tail	J7KH53	Streptococcus_phage	74.7	5.0e-230
AYZ22839.1|533137_535786_-|tail	phage tail tape measure protein	tail	Q9G097	Lactococcus_phage	55.4	4.0e-107
AYZ24359.1|535778_536057_-	hypothetical protein	NA	A0A0S2MYH1	Enterococcus_phage	41.0	7.7e-09
AYZ22840.1|536158_536518_-	hypothetical protein	NA	O34069	Streptococcus_phage	47.9	7.1e-23
AYZ22841.1|536590_537124_-|tail	phage major tail protein, TP901-1 family	tail	L0P2Q8	Streptococcus_phage	58.1	8.8e-46
AYZ22842.1|537132_537522_-	DUF3168 domain-containing protein	NA	W6LLG8	Streptococcus_phage	46.1	7.9e-28
AYZ22843.1|537518_537899_-	hypothetical protein	NA	W6LM73	Streptococcus_phage	44.4	2.8e-17
AYZ22844.1|537891_538191_-	hypothetical protein	NA	W6LMS9	Streptococcus_phage	36.0	8.2e-09
AYZ22845.1|538187_538541_-	hypothetical protein	NA	A0A2H4J002	uncultured_Caudovirales_phage	52.1	8.8e-26
AYZ22846.1|538556_538811_-	hypothetical protein	NA	NA	NA	NA	NA
AYZ22847.1|538823_539876_-|capsid	major capsid protein E	capsid	A0A286QR01	Streptococcus_phage	58.7	6.5e-109
AYZ22848.1|539875_540259_-|head	head decoration protein	head	A0A286QPB3	Streptococcus_phage	36.2	2.8e-09
AYZ22849.1|540268_540847_-	DUF4355 domain-containing protein	NA	A0A0P0ID10	Lactobacillus_phage	36.4	1.8e-07
AYZ22850.1|540957_541161_-	hypothetical protein	NA	A7J295	Streptococcus_phage	53.4	1.2e-06
AYZ22851.1|541157_542129_-|head	phage head morphogenesis protein	head	U6E9F1	Streptococcus_phage	36.5	1.2e-51
AYZ22852.1|542112_543606_-|portal	phage portal protein	portal	C9W9H5	Streptococcus_virus	49.7	1.8e-128
AYZ22853.1|543618_544860_-|terminase	PBSX family phage terminase large subunit	terminase	C9W9H4	Streptococcus_virus	75.9	3.0e-190
AYZ22854.1|544846_545344_-|terminase	terminase small subunit	terminase	U6E976	Streptococcus_phage	63.6	3.0e-48
AYZ22855.1|545452_545641_+	type II toxin-antitoxin system HicA family toxin	NA	F0PIL1	Enterococcus_phage	44.4	7.7e-05
AYZ22856.1|545684_546068_+	HicB family protein	NA	I3NLB2	Bifidobacterium_phage	41.3	2.8e-17
AYZ22857.1|546120_547029_-	hypothetical protein	NA	A0A126HDT5	Lactococcus_phage	62.6	3.8e-97
AYZ22858.1|547691_548126_-	ArpU family transcriptional regulator	NA	J7KDQ1	Streptococcus_phage	95.1	6.5e-71
AYZ22859.1|548516_548783_-	hypothetical protein	NA	NA	NA	NA	NA
AYZ22860.1|548779_548974_-	hypothetical protein	NA	NA	NA	NA	NA
AYZ22861.1|549161_549461_-	hypothetical protein	NA	M1PFH6	Streptococcus_phage	45.4	1.3e-17
AYZ22862.1|549481_549994_-	DUF1642 domain-containing protein	NA	A0A097PAV5	Streptococcus_pyogenes_phage	46.0	2.7e-28
AYZ22863.1|550137_550407_-	hypothetical protein	NA	A7J287	Streptococcus_phage	69.7	1.8e-23
AYZ22864.1|550403_550568_-	hypothetical protein	NA	NA	NA	NA	NA
AYZ22865.1|550598_550838_-	hypothetical protein	NA	A0A097PAV1	Streptococcus_pyogenes_phage	55.6	7.5e-05
AYZ22866.1|550821_551118_-	DUF1599 domain-containing protein	NA	J7KBY0	Streptococcus_phage	99.0	3.1e-48
AYZ22867.1|551129_551474_-	hypothetical protein	NA	J7KK12	Streptococcus_phage	74.3	9.1e-44
AYZ22868.1|551454_551943_-	RusA family crossover junction endodeoxyribonuclease	NA	A0A2P0VJL6	Streptococcus_phage	63.3	8.9e-53
AYZ22869.1|551932_552133_-	hypothetical protein	NA	J7KIX6	Streptococcus_phage	88.1	9.6e-22
AYZ22870.1|552135_552552_-	single-stranded DNA-binding protein	NA	Q938M7	Temperate_phage	83.5	1.2e-58
AYZ22871.1|552544_553219_-	single-stranded DNA-binding protein	NA	A0A097PBE8	Streptococcus_pyogenes_phage	92.4	9.0e-112
AYZ22872.1|553219_553702_-	siphovirus Gp157 family protein	NA	A0A1P8VVS5	Streptococcus_phage	70.0	1.3e-51
AYZ22873.1|553702_553864_-	hypothetical protein	NA	J7KDI4	Streptococcus_phage	90.6	4.7e-19
AYZ22874.1|553866_554121_-	hypothetical protein	NA	J7KK18	Streptococcus_phage	83.3	2.5e-35
AYZ22875.1|554107_554383_-	hypothetical protein	NA	J7KJY6	Streptococcus_phage	100.0	1.2e-43
AYZ22876.1|554518_555361_-	ATP-binding protein	NA	E8ZDI3	Streptococcus_phage	39.6	1.3e-48
AYZ22877.1|555370_556285_-	replication protein	NA	A0A2I6QQV2	Streptococcus_phage	76.1	1.8e-59
AYZ22878.1|556401_556842_-	hypothetical protein	NA	NA	NA	NA	NA
AYZ22879.1|557753_557846_+	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA	NA
AYZ22880.1|558253_558484_-	hypothetical protein	NA	NA	NA	NA	NA
AYZ22881.1|558589_558898_+	hypothetical protein	NA	NA	NA	NA	NA
AYZ22882.1|559324_559780_-	hypothetical protein	NA	A0A0A0YSF8	Streptococcus_phage	38.7	1.6e-11
AYZ22883.1|559776_560697_-	DUF3102 domain-containing protein	NA	J7KDG2	Streptococcus_phage	61.6	2.4e-51
AYZ22884.1|560730_560946_-	XRE family transcriptional regulator	NA	J7KK54	Streptococcus_phage	98.6	5.0e-32
AYZ22885.1|561019_561406_+	hypothetical protein	NA	A0A097PAT1	Streptococcus_pyogenes_phage	98.4	4.7e-65
AYZ22886.1|561394_561604_-	hypothetical protein	NA	A0A097PAQ9	Streptococcus_pyogenes_phage	97.1	8.2e-32
AYZ22887.1|561658_562354_+	hypothetical protein	NA	M1PL51	Streptococcus_phage	41.6	6.8e-30
AYZ22888.1|562500_562659_-	hypothetical protein	NA	J7KH24	Streptococcus_phage	96.2	1.2e-22
AYZ22889.1|562717_562942_+	DUF2188 domain-containing protein	NA	E8ZD70	Streptococcus_phage	67.6	2.2e-22
AYZ22890.1|562938_563082_-	hypothetical protein	NA	NA	NA	NA	NA
AYZ22891.1|563445_564186_+	XRE family transcriptional regulator	NA	J7KJ52	Streptococcus_phage	96.3	3.3e-131
AYZ22892.1|564187_564745_+	GTP pyrophosphokinase	NA	Q0H269	Geobacillus_phage	30.2	1.6e-18
AYZ22893.1|564916_565810_+	hypothetical protein	NA	A0A1I9LJQ0	Stx_converting_phage	47.1	2.1e-68
AYZ22894.1|565933_567013_+|integrase	site-specific integrase	integrase	A0A1X9IGD8	Lactococcus_phage	40.4	3.2e-63
AYZ22895.1|567237_567585_-	50S ribosomal protein L19	NA	NA	NA	NA	NA
567055:567072	attR	ATGTCCCCTGCCGGAATC	NA	NA	NA	NA
AYZ22896.1|568168_569365_-	voltage-gated chloride channel protein	NA	A0A1X9I5Z9	Streptococcus_phage	54.5	3.6e-103
>prophage 5
CP033822	Streptococcus agalactiae strain FDAARGOS_512 chromosome, complete genome	2134138	836925	894683	2134138	tRNA,bacteriocin,transposase,integrase	Paramecium_bursaria_Chlorella_virus(11.11%)	51	862245:862262	897353:897370
AYZ23139.1|836925_837231_-|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
AYZ23140.1|837443_839429_-	transketolase	NA	NA	NA	NA	NA
AYZ23141.1|839553_840984_-	trans-acting positive regulator	NA	NA	NA	NA	NA
AYZ23142.1|840974_842312_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AYZ23143.1|842399_843098_-	aquaporin family protein	NA	M1HWZ0	Paramecium_bursaria_Chlorella_virus	35.9	2.3e-33
AYZ23144.1|843109_844939_-	type 1 glycerol-3-phosphate oxidase	NA	NA	NA	NA	NA
AYZ23145.1|844951_846460_-	glycerol kinase	NA	NA	NA	NA	NA
AYZ23146.1|846573_846837_-	DUF1294 domain-containing protein	NA	NA	NA	NA	NA
AYZ23147.1|846925_847183_-	DUF896 family protein	NA	NA	NA	NA	NA
AYZ23148.1|847194_849234_-|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
AYZ23149.1|849237_849879_-	FMN-dependent NADH-azoreductase	NA	NA	NA	NA	NA
AYZ23150.1|849878_850793_-|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
AYZ23151.1|851105_851648_-	hypothetical protein	NA	NA	NA	NA	NA
AYZ23152.1|851766_852915_-	N-acetylglucosamine-6-phosphate deacetylase	NA	NA	NA	NA	NA
AYZ23153.1|853192_853900_-	peptidase	NA	NA	NA	NA	NA
AYZ23154.1|854091_854403_+	PadR family transcriptional regulator	NA	NA	NA	NA	NA
AYZ23155.1|854423_855107_+	hypothetical protein	NA	NA	NA	NA	NA
AYZ23156.1|855370_856087_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	32.5	1.9e-27
AYZ23157.1|856089_857187_+	ABC transporter permease	NA	NA	NA	NA	NA
AYZ23158.1|857210_857819_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AYZ23159.1|857953_858115_-	lipoprotein	NA	NA	NA	NA	NA
AYZ23160.1|858400_858892_+	RNA polymerase sigma factor	NA	NA	NA	NA	NA
AYZ23161.1|858888_859836_+	hypothetical protein	NA	NA	NA	NA	NA
AYZ23162.1|860095_860776_-	N-acetyltransferase	NA	NA	NA	NA	NA
AYZ23163.1|860818_861397_-	N-acetyltransferase	NA	NA	NA	NA	NA
AYZ23164.1|861496_862057_-	N-acetyltransferase	NA	NA	NA	NA	NA
862245:862262	attL	CCTTATCTTTTAAAGTAT	NA	NA	NA	NA
AYZ23165.1|868636_869782_+	ABC transporter ATP-binding protein	NA	F2Y1V5	Organic_Lake_phycodnavirus	31.7	1.9e-13
AYZ23166.1|869781_870417_+	ABC transporter permease	NA	NA	NA	NA	NA
AYZ23167.1|870419_871346_+	osmoprotectant ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AYZ24367.1|871355_871997_+	ABC transporter permease	NA	NA	NA	NA	NA
AYZ24368.1|872058_872193_-	transporter	NA	NA	NA	NA	NA
AYZ23168.1|873311_874172_-	Rgg/GadR/MutR family transcriptional regulator	NA	NA	NA	NA	NA
AYZ23169.1|874171_874297_-	hypothetical protein	NA	NA	NA	NA	NA
AYZ23170.1|874293_874398_-	hypothetical protein	NA	NA	NA	NA	NA
AYZ23171.1|878204_879638_-	ATP-dependent DNA helicase	NA	A0A1B3AYT3	Gordonia_phage	36.6	2.2e-67
AYZ23172.1|879728_881093_+	restriction endonuclease subunit S	NA	A0A1V0SLK8	Klosneuvirus	27.7	4.2e-15
AYZ23173.1|881046_881637_-	restriction endonuclease subunit S	NA	NA	NA	NA	NA
AYZ23174.1|881658_882456_-|integrase	integrase	integrase	A0A0H4TI16	Erysipelothrix_phage	29.2	1.2e-19
AYZ23175.1|882504_884031_-	restriction endonuclease subunit S	NA	NA	NA	NA	NA
AYZ23176.1|884030_885494_-	SAM-dependent DNA methyltransferase	NA	NA	NA	NA	NA
AYZ23177.1|885506_887831_-	DEAD/DEAH box helicase	NA	Q5YA94	Bacillus_phage	28.2	6.4e-24
AYZ23178.1|888174_888531_-|transposase	transposase	transposase	NA	NA	NA	NA
AYZ23179.1|888527_888893_-|transposase	transposase	transposase	NA	NA	NA	NA
AYZ23180.1|888885_889176_-	hypothetical protein	NA	NA	NA	NA	NA
AYZ23181.1|889186_890041_-	hypothetical protein	NA	Q7Y4K5	Streptococcus_phage	54.7	9.8e-47
AYZ23182.1|890052_890337_-	DNA-binding protein	NA	NA	NA	NA	NA
AYZ23183.1|890483_891002_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AYZ23184.1|891056_892211_+|integrase	site-specific integrase	integrase	Q938N9	Temperate_phage	31.7	6.8e-43
AYZ23185.1|892356_892749_-	30S ribosomal protein S9	NA	NA	NA	NA	NA
AYZ23186.1|892769_893216_-	50S ribosomal protein L13	NA	NA	NA	NA	NA
AYZ23187.1|893516_894683_+|transposase	IS30-like element ISSag9 family transposase	transposase	NA	NA	NA	NA
897353:897370	attR	CCTTATCTTTTAAAGTAT	NA	NA	NA	NA
>prophage 6
CP033822	Streptococcus agalactiae strain FDAARGOS_512 chromosome, complete genome	2134138	1076131	1084118	2134138		Synechococcus_phage(33.33%)	7	NA	NA
AYZ23361.1|1076131_1077436_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A2D1GNZ3	Streptomyces_phage	40.5	1.7e-05
AYZ23362.1|1077582_1078482_-	zoocin A	NA	A0A221J6U0	Arthrobacter_phage	45.9	4.1e-19
AYZ23363.1|1078674_1080225_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH	NA	Q58MG4	Prochlorococcus_phage	48.9	1.1e-77
AYZ23364.1|1080243_1080864_-	hypothetical protein	NA	NA	NA	NA	NA
AYZ23365.1|1080882_1081446_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.6	1.8e-25
AYZ23366.1|1081613_1082636_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	R9TMC7	Synechococcus_phage	42.4	1.2e-62
AYZ23367.1|1082663_1084118_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.5	1.4e-53
>prophage 7
CP033822	Streptococcus agalactiae strain FDAARGOS_512 chromosome, complete genome	2134138	1148237	1155441	2134138		Staphylococcus_phage(33.33%)	8	NA	NA
AYZ23411.1|1148237_1149482_+	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	41.3	3.7e-87
AYZ23412.1|1149483_1150767_+	insulinase family protein	NA	A0A2H4UVM3	Bodo_saltans_virus	23.6	2.2e-05
AYZ23413.1|1150889_1151432_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
AYZ23414.1|1151431_1152271_+	energy-coupling factor transporter ATPase	NA	A0A2H4PQG7	Staphylococcus_phage	26.3	1.0e-16
AYZ23415.1|1152246_1153089_+	energy-coupling factor transporter ATPase	NA	A0A2H4PQG7	Staphylococcus_phage	28.5	2.0e-15
AYZ23416.1|1153081_1153876_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
AYZ23417.1|1154091_1154631_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A249XZV3	Enterococcus_phage	45.8	6.7e-17
AYZ23418.1|1154736_1155441_+	lytic transglycosylase domain-containing protein	NA	A0A2H4J6C5	uncultured_Caudovirales_phage	56.6	4.2e-27
>prophage 8
CP033822	Streptococcus agalactiae strain FDAARGOS_512 chromosome, complete genome	2134138	1668016	1678749	2134138		Streptococcus_phage(84.62%)	16	NA	NA
AYZ23917.1|1668016_1668781_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	24.8	2.6e-14
AYZ23918.1|1668780_1669491_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	28.5	4.7e-18
AYZ23919.1|1669509_1670169_+	CBS domain-containing protein	NA	M1NSC5	Streptococcus_phage	56.5	8.0e-65
AYZ23920.1|1670257_1670893_+	dTMP kinase	NA	M1PSC7	Streptococcus_phage	61.1	2.8e-67
AYZ23921.1|1670912_1671776_+	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	49.7	4.7e-73
AYZ23922.1|1671806_1672133_+	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	61.1	3.2e-30
AYZ24389.1|1672138_1673002_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	70.4	3.1e-109
AYZ23923.1|1672977_1673139_-	hypothetical protein	NA	NA	NA	NA	NA
AYZ23924.1|1673123_1673228_+	hypothetical protein	NA	NA	NA	NA	NA
AYZ23925.1|1673271_1673907_-	copper homeostasis protein CutC	NA	NA	NA	NA	NA
AYZ23926.1|1674039_1675131_+	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	78.0	3.9e-165
AYZ23927.1|1675199_1675748_+	GNAT family N-acetyltransferase	NA	M1PSC3	Streptococcus_phage	57.9	1.4e-54
AYZ23928.1|1675809_1676991_+	phosphoglycerate dehydrogenase	NA	M1NSB9	Streptococcus_phage	75.3	9.1e-168
AYZ23929.1|1677046_1677523_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	50.3	1.1e-36
AYZ23930.1|1677524_1677881_+	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	72.6	5.2e-42
AYZ23931.1|1677921_1678749_-	exodeoxyribonuclease III	NA	M1PSC0	Streptococcus_phage	78.0	1.1e-124
