The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP033711	Yersinia pseudotuberculosis strain FDAARGOS_582 chromosome, complete genome	4762645	248003	302380	4762645	holin,lysis,protease,tail,transposase,terminase,tRNA	Escherichia_phage(25.0%)	75	NA	NA
AYX13978.1|248003_248216_-	KTSC domain-containing protein	NA	A0A0K1LMB5	Caulobacter_phage	42.0	9.9e-09
AYX13979.1|248748_249951_+	DUF4102 domain-containing protein	NA	I6R9B6	Salmonella_phage	56.8	1.2e-135
AYX13980.1|249914_250157_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
AYX13981.1|250153_250396_-	hypothetical protein	NA	A0A2H4J398	uncultured_Caudovirales_phage	53.9	1.5e-13
AYX13982.1|250430_250634_-	hypothetical protein	NA	NA	NA	NA	NA
AYX13983.1|251040_251328_-	hypothetical protein	NA	NA	NA	NA	NA
AYX13984.1|251317_251530_-	hypothetical protein	NA	NA	NA	NA	NA
AYX13985.1|251533_251782_-	hypothetical protein	NA	NA	NA	NA	NA
AYX13986.1|251781_252486_-	hypothetical protein	NA	A0A077SLK5	Escherichia_phage	54.9	3.2e-11
AYX13987.1|252482_252719_-	hypothetical protein	NA	NA	NA	NA	NA
AYX13988.1|252720_253146_-	hypothetical protein	NA	NA	NA	NA	NA
AYX13989.1|253189_253372_-	DUF1317 family protein	NA	A0A1U8QQC1	Enterobacteria_phage	59.6	1.3e-09
AYX13990.1|253368_254304_-	recombinase RecT	NA	A0A193GYL3	Enterobacter_phage	62.5	1.9e-107
AYX13991.1|254296_255115_-	exodeoxyribonuclease VIII	NA	E5AGE0	Erwinia_phage	73.3	1.1e-119
AYX13992.1|255114_255408_-	hypothetical protein	NA	NA	NA	NA	NA
AYX13993.1|255532_255664_-|protease	protease FtsH-inhibitory lysogeny factor CIII	protease	Q776Q5	Enterobacteria_phage	59.5	6.3e-06
AYX13994.1|255682_256711_-	hypothetical protein	NA	K7P6J9	Enterobacteria_phage	65.3	1.4e-31
AYX13995.1|256789_256990_-	hypothetical protein	NA	NA	NA	NA	NA
AYX13996.1|256993_257233_-	hypothetical protein	NA	A0A2H4JA69	uncultured_Caudovirales_phage	63.9	1.2e-15
AYX13997.1|257346_257694_-	hypothetical protein	NA	A0A0K2FII1	Escherichia_phage	35.8	4.0e-07
AYX13998.1|258076_258283_+	hypothetical protein	NA	A0A2H5BFH9	Salmonella_phage	58.2	8.4e-13
AYX13999.1|258661_259186_-	hypothetical protein	NA	A0A0N7BTU4	Escherichia_phage	37.7	1.1e-24
AYX17713.1|259368_260055_-	helix-turn-helix transcriptional regulator	NA	A0A2D1GM27	Escherichia_phage	54.8	4.0e-67
AYX14000.1|260213_260444_+	helix-turn-helix domain-containing protein	NA	Q76H55	Enterobacteria_phage	47.1	1.0e-06
AYX14001.1|260553_260850_+	hypothetical protein	NA	A2SY75	Escherichia_phage	64.3	6.9e-24
AYX14002.1|261016_261886_+	DNA replication protein	NA	E5AGE9	Erwinia_phage	58.5	1.5e-39
AYX14003.1|261887_263225_+	DNA helicase	NA	A0A2I7S0U1	Vibrio_phage	36.9	1.2e-78
AYX14004.1|263237_263609_+	hypothetical protein	NA	NA	NA	NA	NA
AYX14005.1|263605_263791_+	hypothetical protein	NA	R9TNE4	Aeromonas_phage	56.7	2.2e-12
AYX17714.1|264096_264303_+	DUF551 domain-containing protein	NA	NA	NA	NA	NA
AYX14006.1|264295_264757_+	recombination protein NinB	NA	I6R9D0	Salmonella_phage	56.7	9.3e-44
AYX14007.1|264874_265468_+	recombination protein NinG	NA	A0A2R2Z332	Escherichia_phage	44.1	8.9e-39
AYX14008.1|265464_266082_+	antiterminator	NA	M1FPN0	Enterobacteria_phage	69.1	2.1e-59
AYX14009.1|266066_266324_-	hypothetical protein	NA	NA	NA	NA	NA
AYX14010.1|266670_266949_-	endoribonuclease GhoS	NA	A9YWZ2	Burkholderia_phage	34.5	3.8e-08
AYX17715.1|267135_267468_+|holin	phage holin, lambda family	holin	Q2A0C6	Sodalis_phage	41.0	5.4e-17
AYX17716.1|267460_267853_+	M15 family peptidase	NA	K0NZV5	Escherichia_virus	63.1	5.5e-37
AYX14011.1|267849_268305_+|lysis	lysis protein	lysis	A5LH84	Enterobacteria_phage	41.3	6.9e-23
AYX14012.1|268571_269594_+|transposase	IS21-like element IS100 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	99.7	7.0e-201
AYX14013.1|269590_270373_+	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	5.9e-139
AYX14014.1|270804_271281_+	Rha family transcriptional regulator	NA	A0A1R3Y613	Salmonella_virus	76.8	1.4e-63
AYX14015.1|271705_272356_+	hypothetical protein	NA	G8C7P2	Escherichia_phage	67.9	2.5e-79
AYX14016.1|272352_273915_+|terminase	terminase	terminase	G8C7P3	Escherichia_phage	83.1	1.1e-269
AYX14017.1|273914_275303_+	DUF4055 domain-containing protein	NA	A0A1B0VMH0	Pseudomonas_phage	52.8	6.5e-133
AYX14018.1|275303_276416_+	hypothetical protein	NA	I6PD76	Cronobacter_phage	58.2	6.0e-121
AYX14019.1|276537_277311_+	hypothetical protein	NA	A0A1B0VMG1	Pseudomonas_phage	62.3	2.8e-69
AYX14020.1|277324_278530_+	hypothetical protein	NA	A0A1B0VMF8	Pseudomonas_phage	79.2	1.8e-142
AYX14021.1|278529_279060_+	hypothetical protein	NA	G8C7P9	Escherichia_phage	46.1	9.1e-27
AYX14022.1|279056_279311_+	hypothetical protein	NA	J9Q7U0	Salmonella_phage	53.1	2.2e-18
AYX14023.1|279312_279663_+	hypothetical protein	NA	I6PD77	Cronobacter_phage	56.0	6.9e-31
AYX14024.1|279664_280261_+	hypothetical protein	NA	G8C7Q1	Escherichia_phage	49.0	1.7e-42
AYX14025.1|280257_280665_+	hypothetical protein	NA	NA	NA	NA	NA
AYX14026.1|280730_281651_+|tail	phage tail protein	tail	I6PBN6	Cronobacter_phage	49.1	4.4e-61
AYX14027.1|281663_281975_+	hypothetical protein	NA	I6PDG2	Cronobacter_phage	58.3	1.4e-30
AYX14028.1|282022_282283_+	hypothetical protein	NA	A0A0S2SY90	Pseudomonas_phage	50.0	3.7e-13
AYX14029.1|282283_285787_+|tail	phage tail tape measure protein	tail	K7PMB9	Enterobacterial_phage	33.3	1.4e-118
AYX14030.1|285789_286131_+|tail	phage tail protein	tail	Q6UAW6	Klebsiella_phage	50.0	1.7e-21
AYX14031.1|286304_287057_+|tail	phage minor tail protein L	tail	A0A1W6JNX9	Morganella_phage	67.7	9.4e-102
AYX14032.1|287059_287764_+	peptidase P60	NA	K7P6F5	Enterobacteria_phage	75.3	1.3e-108
AYX14033.1|288056_288632_+	DUF4065 domain-containing protein	NA	NA	NA	NA	NA
AYX14034.1|288628_289030_+	hypothetical protein	NA	NA	NA	NA	NA
AYX17717.1|289073_289484_-	hypothetical protein	NA	A0A077K9U2	Edwardsiella_phage	41.5	5.6e-16
AYX17718.1|289660_289960_-	hypothetical protein	NA	NA	NA	NA	NA
AYX14035.1|290078_290507_-	Arc family DNA-binding protein	NA	G9L6D6	Escherichia_phage	59.8	5.8e-32
AYX14036.1|290629_290797_+	Arc family DNA binding domain-containing protein	NA	G9L6D7	Escherichia_phage	60.0	5.8e-12
AYX14037.1|291669_292374_+	transcriptional regulator	NA	A0A0P0ZDC0	Stx2-converting_phage	36.4	1.7e-36
AYX14038.1|292471_293023_+	zinc ribbon domain-containing protein	NA	S4TR42	Salmonella_phage	58.0	9.5e-27
AYX14039.1|293030_293381_+	hypothetical protein	NA	K7PLP0	Enterobacteria_phage	33.6	9.3e-12
AYX14040.1|293436_294057_+|tail	tail assembly protein	tail	K7PGY0	Enterobacteria_phage	56.5	2.1e-54
AYX14041.1|294231_294453_-	hypothetical protein	NA	NA	NA	NA	NA
AYX14042.1|294455_294635_-	hypothetical protein	NA	NA	NA	NA	NA
AYX14043.1|294628_297832_+	host specificity protein J	NA	F1C571	Cronobacter_phage	60.4	0.0e+00
AYX14044.1|297831_298830_+	hypothetical protein	NA	NA	NA	NA	NA
AYX14045.1|299754_300216_+|tail	phage tail protein	tail	B6SCW7	Bacteriophage	39.5	4.1e-07
AYX14046.1|300451_302380_+|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	37.1	1.1e-127
>prophage 2
CP033711	Yersinia pseudotuberculosis strain FDAARGOS_582 chromosome, complete genome	4762645	842422	898831	4762645	holin,lysis,tail,head,plate,transposase,integrase,portal,capsid	Salmonella_phage(38.89%)	72	837615:837630	894505:894520
837615:837630	attL	CACCACCGCCGCGCTG	NA	NA	NA	NA
AYX14486.1|842422_842527_-|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
AYX14487.1|843204_843639_+	hypothetical protein	NA	NA	NA	NA	NA
AYX14488.1|843650_844220_+	hypothetical protein	NA	NA	NA	NA	NA
AYX14489.1|845883_846960_-	toll/interleukin-1 receptor domain-containing protein	NA	NA	NA	NA	NA
AYX14490.1|847025_847316_-	antitoxin	NA	K4NZP3	Burkholderia_phage	39.4	1.8e-05
AYX14491.1|847296_847569_-	BrnT family toxin	NA	NA	NA	NA	NA
AYX14492.1|847599_847959_+|plate	phage baseplate assembly protein V	plate	F1BUP5	Erwinia_phage	61.1	2.6e-17
AYX14493.1|847955_848255_+	lysozyme	NA	A0A218M4K8	Erwinia_phage	64.9	2.6e-23
AYX14494.1|848271_848559_+	hypothetical protein	NA	NA	NA	NA	NA
AYX14495.1|848993_849209_+	hypothetical protein	NA	NA	NA	NA	NA
AYX14496.1|849157_849511_+	DUF2778 domain-containing protein	NA	NA	NA	NA	NA
AYX17749.1|849515_849770_+	hypothetical protein	NA	NA	NA	NA	NA
AYX14497.1|852287_852845_-	N-acetyltransferase	NA	NA	NA	NA	NA
AYX14498.1|852819_853986_-	diaminopimelate decarboxylase	NA	NA	NA	NA	NA
AYX14499.1|853982_854795_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
AYX14500.1|854779_855634_-	hypothetical protein	NA	NA	NA	NA	NA
AYX14501.1|855621_856347_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
AYX14502.1|856336_858070_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
AYX14503.1|858066_859335_-	MFS transporter	NA	NA	NA	NA	NA
AYX14504.1|860291_861804_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
AYX14505.1|862024_862369_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA	NA
AYX14506.1|862394_862583_+	hypothetical protein	NA	NA	NA	NA	NA
AYX14507.1|862612_862795_-	hypothetical protein	NA	NA	NA	NA	NA
AYX14508.1|862986_863160_-	hypothetical protein	NA	NA	NA	NA	NA
AYX14509.1|863403_863550_-	hypothetical protein	NA	NA	NA	NA	NA
AYX14510.1|863919_864147_-	DNA helicase	NA	A0A192Y673	Salmonella_phage	57.7	2.1e-12
AYX14511.1|864257_864773_+|integrase	integrase	integrase	H9C152	Pectobacterium_phage	67.5	1.6e-60
AYX14512.1|864705_864930_+|integrase	integrase	integrase	K7PLZ2	Enterobacterial_phage	76.8	6.6e-19
AYX14513.1|866243_866624_-	hypothetical protein	NA	NA	NA	NA	NA
AYX14514.1|867132_868830_-	DUF4041 domain-containing protein	NA	A0A142LP25	Marinitoga_camini_virus	62.5	9.0e-76
AYX14515.1|868850_869219_-	XRE family transcriptional regulator	NA	A0A2H4JFL3	uncultured_Caudovirales_phage	39.8	5.2e-13
AYX14516.1|869279_869471_+	hypothetical protein	NA	NA	NA	NA	NA
AYX14517.1|869483_869687_+	DNA-binding protein	NA	NA	NA	NA	NA
AYX14518.1|869698_869905_+	hypothetical protein	NA	NA	NA	NA	NA
AYX14519.1|869901_870216_+	hypothetical protein	NA	NA	NA	NA	NA
AYX14520.1|870357_870618_+	hypothetical protein	NA	NA	NA	NA	NA
AYX14521.1|870648_870954_+	hypothetical protein	NA	NA	NA	NA	NA
AYX14522.1|871036_871804_+	hypothetical protein	NA	K7ZRM8	Xanthomonas_citri_phage	49.3	1.9e-09
AYX14523.1|871860_872514_+	3'-5' exonuclease	NA	A0A1D9C9N8	Salinivibrio_phage	62.9	3.0e-56
AYX14524.1|872510_873329_+	Dam family site-specific DNA-(adenine-N6)-methyltransferase	NA	A0A1S6L011	Salmonella_phage	55.9	1.5e-76
AYX14525.1|873417_875973_+	replication endonuclease	NA	E5G6L9	Salmonella_phage	37.9	8.9e-128
AYX14526.1|875953_876184_+	hypothetical protein	NA	NA	NA	NA	NA
AYX14527.1|876180_876525_+	hypothetical protein	NA	NA	NA	NA	NA
AYX14528.1|877206_878247_-|portal	phage portal protein	portal	A0A077K9Q8	Ralstonia_phage	64.3	7.8e-131
AYX14529.1|878246_880010_-	oxidoreductase	NA	A0A1S6KZW3	Salmonella_phage	63.6	3.1e-228
AYX14530.1|880180_880996_+|capsid	GPO family capsid scaffolding protein	capsid	E5G6M5	Salmonella_phage	71.1	9.6e-76
AYX14531.1|881032_882088_+|capsid	phage major capsid protein, P2 family	capsid	E5G6M6	Salmonella_phage	62.8	2.1e-123
AYX14532.1|882094_882748_+	hypothetical protein	NA	F1BUQ7	Erwinia_phage	46.8	1.7e-43
AYX14533.1|882981_883473_+|head	head completion/stabilization protein	head	A0A1S5NNA6	Burkholderia_phage	48.4	7.9e-33
AYX14534.1|883472_883676_+|tail	phage tail protein	tail	E5G6M9	Salmonella_phage	70.1	1.8e-23
AYX14535.1|883705_884092_+|holin	holin	holin	NA	NA	NA	NA
AYX14536.1|884078_884474_+	M15 family peptidase	NA	A9DET4	Yersinia_phage	71.8	3.5e-47
AYX14537.1|884478_884904_+|lysis	LysB family phage lysis regulatory protein	lysis	E5G6N2	Salmonella_phage	48.2	9.2e-22
AYX14538.1|884791_885016_+	hypothetical protein	NA	NA	NA	NA	NA
AYX14539.1|885002_885470_+|tail	phage tail protein	tail	F1BUP9	Erwinia_phage	57.2	1.8e-42
AYX14540.1|885466_885913_+	phage virion morphogenesis protein	NA	A0A1S6L001	Salmonella_phage	50.7	7.7e-35
AYX14541.1|885931_886183_-	hypothetical protein	NA	NA	NA	NA	NA
AYX14542.1|886244_886940_+	hypothetical protein	NA	NA	NA	NA	NA
AYX14543.1|887207_887906_+|plate	phage baseplate assembly protein V	plate	O80314	Escherichia_phage	62.0	6.5e-65
AYX14544.1|887902_888256_+|plate	baseplate assembly protein	plate	A0A218M4K8	Erwinia_phage	59.3	2.4e-31
AYX14545.1|888258_889167_+|plate	baseplate assembly protein	plate	F1BUP3	Erwinia_phage	73.2	1.3e-118
AYX14546.1|889159_889768_+|tail	phage tail protein I	tail	F1BUP2	Erwinia_phage	75.0	1.7e-85
AYX14547.1|889764_891204_+	hypothetical protein	NA	F1BUP1	Erwinia_phage	77.8	3.8e-75
AYX14548.1|891215_891695_+|tail	phage tail protein	tail	F1BUP0	Erwinia_phage	41.9	1.2e-28
AYX14549.1|891828_893004_+|tail	phage tail sheath protein	tail	A0A1S6KZY7	Salmonella_phage	79.8	1.3e-179
AYX14550.1|893015_893531_+|tail	phage major tail tube protein	tail	A0A218M4J0	Erwinia_phage	66.3	2.5e-61
AYX14551.1|893584_893932_+|tail	phage tail assembly protein	tail	E5G6P9	Salmonella_phage	51.6	8.6e-18
AYX17750.1|893946_894066_+|tail	GpE family phage tail protein	tail	NA	NA	NA	NA
AYX14552.1|894058_896974_+|tail	phage tail tape measure protein	tail	Q9ZXK0	Pseudomonas_virus	52.8	2.6e-155
894505:894520	attR	CACCACCGCCGCGCTG	NA	NA	NA	NA
AYX14553.1|896985_897450_+|tail	phage tail protein	tail	E5G6Q2	Salmonella_phage	56.2	1.2e-43
AYX14554.1|897446_898541_+	phage late control D family protein	NA	A0A1S6KZZ5	Salmonella_phage	65.7	1.9e-127
AYX14555.1|898615_898831_+	late control protein B	NA	S4TNZ3	Salmonella_phage	60.6	1.1e-18
>prophage 3
CP033711	Yersinia pseudotuberculosis strain FDAARGOS_582 chromosome, complete genome	4762645	1191402	1258084	4762645	protease,plate,transposase	uncultured_Caudovirales_phage(25.0%)	57	NA	NA
AYX14792.1|1191402_1191855_-|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
AYX14793.1|1191854_1192436_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
AYX14794.1|1192410_1193496_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
AYX14795.1|1193459_1195223_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
AYX14796.1|1195443_1195914_-	hypothetical protein	NA	NA	NA	NA	NA
AYX14797.1|1195913_1196999_-	hypothetical protein	NA	NA	NA	NA	NA
AYX14798.1|1196989_1198591_-	type VI secretion system protein TssA	NA	NA	NA	NA	NA
AYX14799.1|1198634_1202057_-	type VI secretion protein VasK	NA	NA	NA	NA	NA
AYX17762.1|1202053_1203175_-	hypothetical protein	NA	NA	NA	NA	NA
AYX14800.1|1204065_1204578_-	hypothetical protein	NA	NA	NA	NA	NA
AYX14801.1|1204582_1206331_-	TIGR02594 family protein	NA	A0A1U9ZAE8	Proteus_phage	29.0	9.8e-09
AYX14802.1|1206339_1206756_-	DUF4431 domain-containing protein	NA	NA	NA	NA	NA
AYX14803.1|1206758_1209488_-	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	32.5	5.2e-17
AYX14804.1|1209803_1210199_-	hypothetical protein	NA	NA	NA	NA	NA
AYX14805.1|1210202_1211474_-	hypothetical protein	NA	NA	NA	NA	NA
AYX14806.1|1211591_1214090_-	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	32.5	2.8e-17
AYX14807.1|1214086_1216735_-	type VI secretion system ATPase TssH	NA	K4FB40	Cronobacter_phage	31.2	1.9e-93
AYX14808.1|1216935_1217115_+	hypothetical protein	NA	NA	NA	NA	NA
AYX14809.1|1217122_1217614_-	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
AYX14810.1|1217617_1219363_-	OmpA family protein	NA	NA	NA	NA	NA
AYX14811.1|1219362_1220049_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
AYX14812.1|1220045_1221398_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
AYX14813.1|1221409_1222960_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
AYX14814.1|1223002_1223503_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
AYX14815.1|1224167_1224410_-	hypothetical protein	NA	NA	NA	NA	NA
AYX14816.1|1224465_1225314_-	ACP S-malonyltransferase	NA	NA	NA	NA	NA
AYX14817.1|1225412_1225661_-	acyl carrier protein	NA	NA	NA	NA	NA
AYX14818.1|1225698_1226139_-	lipocalin-like domain-containing protein	NA	NA	NA	NA	NA
AYX14819.1|1226225_1227014_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
AYX14820.1|1227016_1227778_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AYX14821.1|1227770_1228490_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AYX14822.1|1228482_1229721_-	hydroxymethylglutaryl-CoA synthase family protein	NA	NA	NA	NA	NA
AYX14823.1|1229736_1230483_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
AYX14824.1|1230475_1231759_-	beta-ketoacyl-[acyl-carrier-protein] synthase family protein	NA	NA	NA	NA	NA
AYX17763.1|1231748_1232207_-	beta-hydroxyacyl-ACP dehydratase	NA	NA	NA	NA	NA
AYX14825.1|1232536_1232857_-	hypothetical protein	NA	NA	NA	NA	NA
AYX14826.1|1233485_1234232_+	SDR family oxidoreductase	NA	F2NZ40	Diadromus_pulchellus_ascovirus	31.4	3.3e-14
AYX14827.1|1234385_1236803_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AYX14828.1|1240126_1240456_+	sulfurtransferase TusE	NA	NA	NA	NA	NA
AYX14829.1|1240507_1240786_-	acylphosphatase	NA	NA	NA	NA	NA
AYX14830.1|1240879_1242070_+	ribosomal RNA large subunit methyltransferase I	NA	W6LLI2	Streptococcus_phage	28.1	2.1e-26
AYX14831.1|1242130_1242448_+	heat shock protein HspQ	NA	NA	NA	NA	NA
AYX14832.1|1242556_1242973_-	CoA-binding protein	NA	NA	NA	NA	NA
AYX14833.1|1243288_1243969_+	DUF2057 family protein	NA	NA	NA	NA	NA
AYX14834.1|1244147_1244612_+	methylglyoxal synthase	NA	NA	NA	NA	NA
AYX14835.1|1244672_1246727_-	DNA helicase IV	NA	A7KV33	Bacillus_phage	25.8	5.7e-16
AYX14836.1|1246920_1247367_+	YccF domain-containing protein	NA	NA	NA	NA	NA
AYX14837.1|1247396_1249535_+	TIGR01666 family membrane protein	NA	NA	NA	NA	NA
AYX14838.1|1249636_1250272_-	TfoX family DNA transformation protein	NA	NA	NA	NA	NA
AYX14839.1|1250500_1251007_+	cell division inhibitor SulA	NA	NA	NA	NA	NA
AYX14840.1|1251364_1252426_+	porin OmpA	NA	NA	NA	NA	NA
AYX14841.1|1252531_1252987_-	macrodomain Ter protein MatP	NA	NA	NA	NA	NA
AYX14842.1|1253176_1254949_+|protease	Lon protease family protein	protease	NA	NA	NA	NA
AYX14843.1|1255017_1255536_+	beta-hydroxydecanoyl-ACP dehydratase	NA	NA	NA	NA	NA
AYX14844.1|1255801_1255990_-	hypothetical protein	NA	NA	NA	NA	NA
AYX14845.1|1256235_1257510_+	beta-ketoacyl-[acyl-carrier-protein] synthase II	NA	NA	NA	NA	NA
AYX14846.1|1257625_1258084_-|transposase	IS200/IS605-like element IS1541B family transposase	transposase	I4AZI8	Saccharomonospora_phage	30.7	2.1e-11
>prophage 4
CP033711	Yersinia pseudotuberculosis strain FDAARGOS_582 chromosome, complete genome	4762645	1462513	1470831	4762645	coat,tail,plate	Shigella_phage(33.33%)	9	NA	NA
AYX15007.1|1462513_1463293_-|tail	tail fiber protein	tail	Q9MCR6	Enterobacteria_phage	52.4	7.1e-52
AYX15008.1|1463389_1463992_-	DUF2313 domain-containing protein	NA	A0A2P9JZK7	Alteromonadaceae_phage	38.6	2.0e-33
AYX15009.1|1463988_1465125_-|plate	baseplate J/gp47 family protein	plate	B5TK75	Pseudomonas_phage	30.3	6.5e-30
AYX15010.1|1465128_1465584_-	hypothetical protein	NA	A0A0C4UR04	Shigella_phage	43.8	4.3e-17
AYX15011.1|1465580_1466177_-|plate	baseplate assembly protein	plate	NA	NA	NA	NA
AYX15012.1|1466192_1467248_-|tail	phage tail protein	tail	M1PVV2	Vibrio_phage	27.2	7.9e-38
AYX15013.1|1467244_1468651_-	hypothetical protein	NA	Q8SBG8	Shigella_phage	33.7	2.1e-17
AYX15014.1|1468917_1470411_-|coat	coat protein	coat	NA	NA	NA	NA
AYX15015.1|1470531_1470831_-|tail	phage tail assembly protein	tail	NA	NA	NA	NA
>prophage 5
CP033711	Yersinia pseudotuberculosis strain FDAARGOS_582 chromosome, complete genome	4762645	1911134	1989196	4762645	holin,lysis,tail,protease,coat,portal	Salmonella_phage(23.91%)	88	NA	NA
AYX15390.1|1911134_1911440_+|holin	holin	holin	A0A286N2Q5	Klebsiella_phage	46.2	2.0e-10
AYX15391.1|1911636_1913241_+	chitin-binding protein	NA	Q9J8B0	Spodoptera_exigua_multiple_nucleopolyhedrovirus	31.0	2.3e-20
AYX15392.1|1913700_1914612_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AYX15393.1|1916486_1917947_+	beta-Ala-His dipeptidase	NA	NA	NA	NA	NA
AYX15394.1|1918060_1919119_-	DNA polymerase IV	NA	NA	NA	NA	NA
AYX15395.1|1919474_1920422_+	glycerophosphodiester phosphodiesterase	NA	NA	NA	NA	NA
AYX15396.1|1920666_1920894_-	(Na+)-NQR maturation NqrM	NA	NA	NA	NA	NA
AYX17786.1|1920906_1921929_-	FAD:protein FMN transferase	NA	NA	NA	NA	NA
AYX15397.1|1921969_1923193_-	NADH:ubiquinone reductase (Na(+)-transporting) subunit F	NA	NA	NA	NA	NA
AYX15398.1|1923208_1923805_-	NADH:ubiquinone reductase (Na(+)-transporting) subunit E	NA	NA	NA	NA	NA
AYX15399.1|1923811_1924441_-	NADH:ubiquinone reductase (Na(+)-transporting) subunit D	NA	NA	NA	NA	NA
AYX15400.1|1924433_1925234_-	Na(+)-translocating NADH-quinone reductase subunit C	NA	NA	NA	NA	NA
AYX15401.1|1925223_1926465_-	NADH:ubiquinone reductase (Na(+)-transporting) subunit B	NA	NA	NA	NA	NA
AYX15402.1|1926468_1927812_-	NADH:ubiquinone reductase (Na(+)-transporting) subunit A	NA	NA	NA	NA	NA
AYX15403.1|1927913_1928093_+	hypothetical protein	NA	NA	NA	NA	NA
AYX15404.1|1928307_1929048_+	transpeptidase	NA	NA	NA	NA	NA
AYX15405.1|1929012_1929786_-	class II glutamine amidotransferase	NA	NA	NA	NA	NA
AYX15406.1|1929988_1930570_-	D-sedoheptulose 7-phosphate isomerase	NA	A0A067XQR2	Caulobacter_phage	30.8	3.7e-13
AYX15407.1|1930809_1933257_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AYX15408.1|1933428_1934175_-	transcriptional regulator	NA	NA	NA	NA	NA
AYX15409.1|1934176_1936030_-	glycosyltransferase	NA	NA	NA	NA	NA
AYX15410.1|1936184_1942355_-	filamentous hemagglutinin N-terminal domain-containing protein	NA	NA	NA	NA	NA
AYX15411.1|1942395_1944186_-	ShlB/FhaC/HecB family hemolysin secretion/activation protein	NA	NA	NA	NA	NA
AYX15412.1|1944888_1944990_-	gluconate 5-dehydrogenase	NA	NA	NA	NA	NA
AYX15413.1|1945388_1946612_-	methylthioribose kinase	NA	NA	NA	NA	NA
AYX15414.1|1946807_1947848_+	S-methyl-5-thioribose-1-phosphate isomerase	NA	NA	NA	NA	NA
AYX15415.1|1947880_1948423_-	acireductone dioxygenase	NA	NA	NA	NA	NA
AYX15416.1|1948521_1949211_-	acireductone synthase	NA	NA	NA	NA	NA
AYX15417.1|1949207_1949876_-	methylthioribulose 1-phosphate dehydratase	NA	NA	NA	NA	NA
AYX15418.1|1952151_1952403_+	Arc family DNA-binding protein	NA	E7C9U8	Salmonella_phage	64.6	2.3e-20
AYX15419.1|1952386_1953067_+	hypothetical protein	NA	NA	NA	NA	NA
AYX15420.1|1953085_1954951_-	DNA transfer protein	NA	E7C9U6	Salmonella_phage	62.0	6.6e-197
AYX15421.1|1954950_1956387_-	DNA transfer protein	NA	A0A2H4FND5	Salmonella_phage	43.8	1.8e-85
AYX15422.1|1956386_1957037_-	DNA transfer protein	NA	A0A2H4FUQ9	Salmonella_phage	48.2	1.2e-39
AYX15423.1|1957030_1957492_-	DUF2824 family protein	NA	Q2A0B3	Sodalis_phage	70.5	2.7e-59
AYX15424.1|1957507_1958209_-|tail	phage tail protein	tail	C6ZR14	Salmonella_phage	59.4	2.3e-38
AYX15425.1|1958208_1959624_-	hypothetical protein	NA	Q9AYZ4	Salmonella_phage	72.5	1.7e-205
AYX15426.1|1959595_1960093_-	recombinase RmuC	NA	G8EYJ2	Enterobacteria_phage	57.1	2.3e-40
AYX15427.1|1960076_1960307_-	hypothetical protein	NA	A0A2D1GLK1	Escherichia_phage	77.6	4.4e-18
AYX15428.1|1960347_1961631_-|coat	coat protein	coat	A0A2D1GLV2	Escherichia_phage	68.5	3.6e-170
AYX15429.1|1961630_1962539_-	scaffolding protein	NA	A0A0M3ULI9	Salmonella_phage	75.2	3.5e-119
AYX15430.1|1962552_1964718_-|portal	portal protein	portal	A0A2D1GLJ6	Escherichia_phage	69.1	2.2e-289
AYX15431.1|1964717_1966178_-	DNA packaging protein	NA	Q2A0C1	Sodalis_phage	66.5	3.8e-192
AYX15432.1|1966137_1966638_-	DNA-packaging protein	NA	C6ZR06	Salmonella_phage	72.3	8.5e-59
AYX15433.1|1966641_1967007_-	hypothetical protein	NA	E7C9U7	Salmonella_phage	36.9	8.2e-11
AYX15434.1|1967031_1967499_-|lysis	lysis protein	lysis	A0A2H4JHL8	uncultured_Caudovirales_phage	45.0	1.9e-23
AYX15435.1|1967483_1967966_-	lysozyme	NA	A0A2H4JCH1	uncultured_Caudovirales_phage	67.3	5.7e-60
AYX17787.1|1967946_1968144_-|holin	holin	holin	B6SD15	Bacteriophage	61.0	3.2e-17
AYX15436.1|1968376_1968706_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
AYX15437.1|1968680_1968911_-	hypothetical protein	NA	NA	NA	NA	NA
AYX15438.1|1969282_1969771_-	DUF1133 family protein	NA	A0A1R3Y5U9	Salmonella_virus	75.2	4.1e-66
AYX15439.1|1969767_1969959_-	protein ninH	NA	A5VW84	Enterobacteria_phage	62.9	9.5e-11
AYX15440.1|1969955_1970549_-	recombination protein NinG	NA	A0A2R2Z332	Escherichia_phage	44.1	1.2e-38
AYX15441.1|1970523_1970892_-	hypothetical protein	NA	NA	NA	NA	NA
AYX15442.1|1970863_1971205_-	hypothetical protein	NA	K7P7P8	Enterobacteria_phage	45.7	6.1e-16
AYX15443.1|1971318_1971720_-	DUF2591 domain-containing protein	NA	A0A2I7R3U5	Vibrio_phage	33.0	9.4e-08
AYX15444.1|1971899_1972343_-	hypothetical protein	NA	K7P7B8	Enterobacteria_phage	62.3	1.9e-46
AYX15445.1|1972502_1973120_-	DUF551 domain-containing protein	NA	NA	NA	NA	NA
AYX15446.1|1973116_1973302_-	hypothetical protein	NA	R9TNE4	Aeromonas_phage	56.7	2.2e-12
AYX15447.1|1973298_1973670_-	hypothetical protein	NA	NA	NA	NA	NA
AYX15448.1|1973666_1974356_-	DNA replication protein	NA	A0A077KCC8	Edwardsiella_phage	56.2	1.6e-63
AYX17788.1|1974352_1975285_-	replication protein	NA	A0A1I9LJP3	Stx_converting_phage	68.8	1.8e-54
AYX15449.1|1975338_1976079_-	hypothetical protein	NA	NA	NA	NA	NA
AYX15450.1|1976103_1976397_-	hypothetical protein	NA	A2SY75	Escherichia_phage	63.9	6.1e-25
AYX15451.1|1976506_1976734_-	XRE family transcriptional regulator	NA	A0A1C9IHV8	Salmonella_phage	53.3	1.3e-11
AYX15452.1|1976832_1977510_+	helix-turn-helix transcriptional regulator	NA	F1C5C2	Cronobacter_phage	55.2	5.5e-61
AYX15453.1|1977608_1978619_+	hypothetical protein	NA	NA	NA	NA	NA
AYX15454.1|1978662_1978869_-	hypothetical protein	NA	A0A2H5BFH9	Salmonella_phage	58.2	1.1e-12
AYX15455.1|1979243_1979468_+	hypothetical protein	NA	NA	NA	NA	NA
AYX15456.1|1979530_1979878_+	hypothetical protein	NA	A0A0K2FII1	Escherichia_phage	35.8	4.0e-07
AYX15457.1|1979991_1980231_+	hypothetical protein	NA	A0A2H4JA69	uncultured_Caudovirales_phage	63.9	1.2e-15
AYX15458.1|1980234_1980435_+	hypothetical protein	NA	NA	NA	NA	NA
AYX15459.1|1980512_1981541_+	hypothetical protein	NA	K7P6J9	Enterobacteria_phage	65.3	1.4e-31
AYX15460.1|1981559_1981691_+|protease	protease FtsH-inhibitory lysogeny factor CIII	protease	Q776Q5	Enterobacteria_phage	59.5	6.3e-06
AYX15461.1|1981815_1982109_+	hypothetical protein	NA	NA	NA	NA	NA
AYX15462.1|1982108_1982927_+	exodeoxyribonuclease VIII	NA	E5AGE0	Erwinia_phage	73.3	1.1e-119
AYX15463.1|1982919_1983855_+	recombinase RecT	NA	A0A193GYL3	Enterobacter_phage	62.5	1.9e-107
AYX15464.1|1983851_1984034_+	DUF1317 family protein	NA	A0A1U8QQC1	Enterobacteria_phage	59.6	1.3e-09
AYX15465.1|1984077_1984503_+	hypothetical protein	NA	NA	NA	NA	NA
AYX15466.1|1984504_1984741_+	hypothetical protein	NA	NA	NA	NA	NA
AYX15467.1|1984737_1985442_+	hypothetical protein	NA	A0A077SLK5	Escherichia_phage	54.9	3.2e-11
AYX15468.1|1985441_1985690_+	hypothetical protein	NA	NA	NA	NA	NA
AYX15469.1|1985693_1985906_+	hypothetical protein	NA	A0A0U4JX53	Pseudomonas_phage	50.7	2.6e-09
AYX15470.1|1985895_1986162_+	hypothetical protein	NA	NA	NA	NA	NA
AYX15471.1|1986568_1986772_+	hypothetical protein	NA	NA	NA	NA	NA
AYX15472.1|1986768_1987311_+	phage N-6-adenine-methyltransferase	NA	G9L688	Escherichia_phage	67.1	6.4e-60
AYX15473.1|1987640_1987892_+	DNA-binding protein	NA	A0A286S2A4	Klebsiella_phage	50.0	5.8e-16
AYX15474.1|1987924_1989196_+	DUF3596 domain-containing protein	NA	Q8W658	Enterobacteria_phage	53.4	1.7e-127
>prophage 6
CP033711	Yersinia pseudotuberculosis strain FDAARGOS_582 chromosome, complete genome	4762645	3714809	3750187	4762645	holin,tail,head,integrase,portal,terminase,capsid,tRNA	Cronobacter_phage(74.19%)	43	3715655:3715703	3744391:3744439
AYX16868.1|3714809_3715412_+|terminase	terminase small subunit	terminase	A0A2R3UAN5	Myoviridae_environmental_samples	49.2	1.8e-39
3715655:3715703	attL	ATTTGGTGGCCCCTACTGGACTTGAACCAGTGACCAAGCGATTATGAGT	NA	NA	NA	NA
AYX16869.1|3715747_3716845_-|integrase	integrase	integrase	A0A218M4I3	Erwinia_phage	65.5	5.9e-129
AYX16870.1|3716876_3717782_-	hypothetical protein	NA	NA	NA	NA	NA
AYX16871.1|3717791_3718370_-	phage repressor protein	NA	F1BUN8	Cronobacter_phage	32.8	2.1e-29
AYX16872.1|3718484_3718706_+	regulator	NA	NA	NA	NA	NA
AYX16873.1|3718737_3719247_+	hypothetical protein	NA	A0A1S6L008	Salmonella_phage	51.8	2.4e-40
AYX16874.1|3719254_3719458_+	DUF2724 domain-containing protein	NA	NA	NA	NA	NA
AYX16875.1|3719460_3719835_+	hypothetical protein	NA	NA	NA	NA	NA
AYX16876.1|3719844_3720252_+	hypothetical protein	NA	NA	NA	NA	NA
AYX16877.1|3720330_3720570_+	DUF2732 family protein	NA	NA	NA	NA	NA
AYX16878.1|3720566_3722654_+	replication endonuclease	NA	F1BUM9	Cronobacter_phage	61.0	8.1e-228
AYX16879.1|3722760_3722973_+	hypothetical protein	NA	NA	NA	NA	NA
AYX16880.1|3722949_3723216_-	transcriptional regulator	NA	F1BUM8	Cronobacter_phage	68.2	3.6e-32
AYX17890.1|3723266_3724238_-|portal	phage portal protein	portal	F1BUM7	Cronobacter_phage	69.5	1.9e-139
AYX16881.1|3724285_3726073_-|terminase	terminase	terminase	F1BUM5	Cronobacter_phage	66.4	1.5e-235
AYX16882.1|3726239_3727094_+|capsid	phage capsid protein	capsid	F1BUM4	Cronobacter_phage	48.4	1.6e-65
AYX16883.1|3727148_3728180_+|capsid	phage major capsid protein, P2 family	capsid	F1BUM2	Cronobacter_phage	75.8	6.1e-144
AYX16884.1|3728190_3728889_+|terminase	terminase	terminase	F1BUM0	Cronobacter_phage	52.6	2.5e-64
AYX16885.1|3728984_3729437_+|head	head completion/stabilization protein	head	F1BUL8	Cronobacter_phage	56.7	5.2e-39
AYX16886.1|3729433_3729922_+|tail	phage tail protein	tail	F1BUL7	Cronobacter_phage	42.4	3.9e-32
AYX16887.1|3729921_3730596_+	hypothetical protein	NA	F1BUL6	Cronobacter_phage	68.2	2.2e-81
AYX16888.1|3730622_3731762_+	DUF2586 domain-containing protein	NA	F1BUL5	Cronobacter_phage	65.7	4.0e-136
AYX16889.1|3731758_3732211_+	DUF2597 family protein	NA	F1BUL4	Cronobacter_phage	59.5	2.4e-44
AYX16890.1|3732220_3732511_+|holin	holin	holin	Q6K1I2	Salmonella_virus	52.8	2.2e-14
AYX16891.1|3732507_3732849_+	M15 family peptidase	NA	F1BUL3	Cronobacter_phage	82.2	1.5e-43
AYX16892.1|3732848_3733190_+	hypothetical protein	NA	F1BUL2	Cronobacter_phage	40.9	6.3e-13
AYX16893.1|3733146_3733338_+	hypothetical protein	NA	F1BUL1	Cronobacter_phage	63.2	5.1e-12
AYX16894.1|3733339_3733606_+	hypothetical protein	NA	A5X9I7	Aeromonas_virus	54.9	1.0e-18
AYX16895.1|3733793_3735770_+|tail	phage tail tape measure protein	tail	F1BUK9	Cronobacter_phage	48.4	2.7e-172
AYX16896.1|3735769_3736102_+	DUF2590 family protein	NA	F1BUK8	Cronobacter_phage	68.3	1.5e-35
AYX16897.1|3736094_3737279_+	hypothetical protein	NA	F1BUK6	Cronobacter_phage	65.7	2.3e-150
AYX16898.1|3737271_3737907_+	hypothetical protein	NA	F1BUK5	Cronobacter_phage	56.9	5.9e-57
AYX17891.1|3739592_3740000_+|tail	tail assembly chaperone	tail	NA	NA	NA	NA
AYX16899.1|3739989_3740721_+	hypothetical protein	NA	F1BUK1	Cronobacter_phage	39.6	9.9e-40
AYX16900.1|3740686_3741235_+	hypothetical protein	NA	F1BUJ9	Cronobacter_phage	63.7	6.3e-55
AYX16901.1|3741231_3742887_+	hypothetical protein	NA	F1BUJ7	Cronobacter_phage	52.8	1.1e-166
AYX16902.1|3742854_3743064_-	hypothetical protein	NA	NA	NA	NA	NA
AYX16903.1|3743062_3743269_+	hypothetical protein	NA	NA	NA	NA	NA
AYX16904.1|3743393_3744224_-	ATP-dependent RNA helicase HrpA	NA	NA	NA	NA	NA
AYX16905.1|3744665_3746504_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	33.3	1.9e-34
3744391:3744439	attR	ATTTGGTGGCCCCTACTGGACTTGAACCAGTGACCAAGCGATTATGAGT	NA	NA	NA	NA
AYX16906.1|3746661_3748410_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	38.2	8.7e-74
AYX16907.1|3748545_3748761_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
AYX16908.1|3749173_3750187_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	57.7	6.5e-106
