The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP027786	Tetragenococcus koreensis strain KCTC 3924 chromosome, complete genome	2720974	25023	33481	2720974		Streptococcus_phage(66.67%)	10	NA	NA
AYW44476.1|25023_26424_-	6-phospho-beta-glucosidase	NA	A0A0B5JD41	Pandoravirus	28.5	8.6e-40
AYW44477.1|26629_28366_+	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	36.5	1.4e-52
AYW44478.1|28387_28699_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
AYW44479.1|28759_29356_+	recombination protein RecR	NA	NA	NA	NA	NA
AYW44480.1|29389_30043_+	dTMP kinase	NA	M1PSC7	Streptococcus_phage	52.7	7.7e-52
AYW44481.1|30039_30369_+	hypothetical protein	NA	NA	NA	NA	NA
AYW44482.1|30414_31347_+	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	32.3	4.4e-32
AYW46787.1|31372_32203_+	signal peptidase	NA	NA	NA	NA	NA
AYW44483.1|32189_32543_+	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	39.3	4.8e-16
AYW44484.1|32608_33481_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	55.6	9.6e-82
>prophage 2
CP027786	Tetragenococcus koreensis strain KCTC 3924 chromosome, complete genome	2720974	1427235	1436720	2720974		Lactobacillus_phage(42.86%)	7	NA	NA
AYW45683.1|1427235_1429005_-	ABC transporter	NA	W8CYL7	Bacillus_phage	27.3	6.3e-48
AYW45684.1|1429001_1430717_-	ABC transporter ATP-binding protein	NA	F2Y165	Organic_Lake_phycodnavirus	24.2	2.0e-14
AYW45685.1|1430981_1432451_-	peptide ABC transporter permease	NA	A0A0P0IY73	Acinetobacter_phage	37.1	2.6e-79
AYW45686.1|1432814_1433519_+	deoxynucleoside kinase	NA	A0A1I9KK98	Lactobacillus_phage	39.1	6.6e-41
AYW45687.1|1433843_1434452_+	NADPH-dependent FMN reductase	NA	A0A2P0ZL77	Lactobacillus_phage	52.3	4.1e-55
AYW45688.1|1434472_1435771_+	NADPH-dependent FMN reductase	NA	A0A2P0ZL82	Lactobacillus_phage	64.0	2.4e-65
AYW45689.1|1435859_1436720_-	hypothetical protein	NA	A0A141HSE6	Bacillus_phage	28.0	1.3e-11
>prophage 3
CP027786	Tetragenococcus koreensis strain KCTC 3924 chromosome, complete genome	2720974	1860801	1921161	2720974	transposase	Streptococcus_phage(22.22%)	60	NA	NA
AYW46036.1|1860801_1862064_+|transposase	DDE transposase	transposase	NA	NA	NA	NA
AYW46037.1|1862495_1863758_+|transposase	DDE transposase	transposase	NA	NA	NA	NA
AYW46038.1|1864023_1864512_+	ArgR family transcriptional regulator	NA	NA	NA	NA	NA
AYW46039.1|1865039_1866752_-	PTS lactose transporter subunit IIBC	NA	NA	NA	NA	NA
AYW46040.1|1866841_1868272_-	6-phospho-beta-galactosidase	NA	NA	NA	NA	NA
AYW46041.1|1868274_1868625_-	PTS lactose transporter subunit IIA	NA	NA	NA	NA	NA
AYW46042.1|1868692_1869652_-	tagatose-bisphosphate aldolase	NA	NA	NA	NA	NA
AYW46043.1|1869667_1870600_-	tagatose-6-phosphate kinase	NA	NA	NA	NA	NA
AYW46044.1|1870620_1871283_-	HAD family phosphatase	NA	NA	NA	NA	NA
AYW46045.1|1871282_1871798_-	galactose-6-phosphate isomerase subunit LacB	NA	NA	NA	NA	NA
AYW46046.1|1871823_1872252_-	galactose-6-phosphate isomerase subunit LacA	NA	NA	NA	NA	NA
AYW46047.1|1872442_1872946_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
AYW46048.1|1872938_1873244_+	PTS fructose transporter subunit IIB	NA	NA	NA	NA	NA
AYW46049.1|1873264_1874674_+	PTS glucitol transporter subunit IIA	NA	NA	NA	NA	NA
AYW46050.1|1874763_1875516_-	DeoR family transcriptional regulator	NA	A0A077SK06	Escherichia_phage	30.7	4.9e-18
AYW46051.1|1875675_1876152_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AYW46052.1|1876358_1876934_-	hypothetical protein	NA	NA	NA	NA	NA
AYW46053.1|1877068_1877596_+	hypothetical protein	NA	NA	NA	NA	NA
AYW46054.1|1877953_1878382_+	hypothetical protein	NA	NA	NA	NA	NA
AYW46055.1|1878568_1879306_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AYW46056.1|1879552_1879945_-	30S ribosomal protein S9	NA	NA	NA	NA	NA
AYW46057.1|1879960_1880404_-	50S ribosomal protein L13	NA	NA	NA	NA	NA
AYW46058.1|1880727_1882038_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	36.2	2.1e-64
AYW46059.1|1882517_1883393_-	fructokinase	NA	NA	NA	NA	NA
AYW46060.1|1883480_1884422_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AYW46061.1|1884536_1885607_-	BMP family ABC transporter substrate-binding protein	NA	A0A0A7DN02	Lactobacillus_phage	39.3	2.3e-61
AYW46062.1|1885944_1886439_-	hypothetical protein	NA	NA	NA	NA	NA
AYW46063.1|1886448_1887327_-	hypothetical protein	NA	NA	NA	NA	NA
AYW46064.1|1887401_1888355_-	hypothetical protein	NA	NA	NA	NA	NA
AYW46065.1|1888494_1889229_-	esterase	NA	NA	NA	NA	NA
AYW46066.1|1889313_1889955_-	V-type ATP synthase subunit D	NA	NA	NA	NA	NA
AYW46067.1|1889945_1891343_-	V-type ATP synthase subunit B	NA	NA	NA	NA	NA
AYW46068.1|1891342_1893127_-	V-type ATP synthase subunit A	NA	NA	NA	NA	NA
AYW46069.1|1893160_1893475_-	V-type ATP synthase subunit F	NA	NA	NA	NA	NA
AYW46070.1|1893467_1894469_-	V-type ATP synthase subunit C	NA	NA	NA	NA	NA
AYW46071.1|1894480_1895077_-	ATPase	NA	NA	NA	NA	NA
AYW46072.1|1895087_1895561_-	V-type ATP synthase subunit K	NA	NA	NA	NA	NA
AYW46073.1|1895564_1897538_-	V-type ATP synthase subunit I	NA	NA	NA	NA	NA
AYW46074.1|1897527_1897851_-	hypothetical protein	NA	NA	NA	NA	NA
AYW46075.1|1897930_1898347_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
AYW46076.1|1898562_1899267_-	magnesium transporter MgtC	NA	G3MA03	Bacillus_virus	43.7	3.5e-18
AYW46077.1|1899350_1899647_-	hypothetical protein	NA	NA	NA	NA	NA
AYW46078.1|1901359_1903318_-	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	34.7	1.8e-96
AYW46079.1|1904191_1904854_-	nucleoside-diphosphate sugar epimerase	NA	NA	NA	NA	NA
AYW46080.1|1904929_1905382_-	hypothetical protein	NA	NA	NA	NA	NA
AYW46081.1|1905545_1906160_+	XRE family transcriptional regulator	NA	Q9AZW3	Lactococcus_phage	42.9	1.3e-19
AYW46082.1|1906347_1907037_-	hypothetical protein	NA	M4QRR4	Synechococcus_phage	32.1	3.0e-22
AYW46083.1|1907055_1907874_-	PTS mannose transporter subunit IID	NA	NA	NA	NA	NA
AYW46084.1|1907863_1908634_-	PTS sugar transporter	NA	NA	NA	NA	NA
AYW46085.1|1908662_1909133_-	PTS mannose/fructose/sorbose transporter subunit IIB	NA	NA	NA	NA	NA
AYW46086.1|1909146_1909566_-	PTS mannose transporter subunit IIA	NA	NA	NA	NA	NA
AYW46087.1|1909637_1910906_-	hypothetical protein	NA	NA	NA	NA	NA
AYW46088.1|1911070_1912429_+|transposase	transposase	transposase	NA	NA	NA	NA
AYW46089.1|1912333_1913938_-	sigma-54-dependent transcriptional regulator	NA	NA	NA	NA	NA
AYW46090.1|1914451_1915672_+	hypothetical protein	NA	NA	NA	NA	NA
AYW46091.1|1915746_1916103_-	reverse transcriptase	NA	NA	NA	NA	NA
AYW46092.1|1916156_1917017_-	group II intron reverse transcriptase/maturase	NA	D4HTV9	Vibrio_phage	28.0	4.0e-16
AYW46093.1|1917689_1919108_+|transposase	ISLre2 family transposase	transposase	NA	NA	NA	NA
AYW46094.1|1919317_1919938_+	DUF924 domain-containing protein	NA	E3T4R4	Cafeteria_roenbergensis_virus	35.8	1.7e-08
AYW46095.1|1919901_1921161_-|transposase	DDE transposase	transposase	NA	NA	NA	NA
>prophage 4
CP027786	Tetragenococcus koreensis strain KCTC 3924 chromosome, complete genome	2720974	2529642	2579566	2720974	integrase,transposase	Bacillus_phage(33.33%)	45	2551655:2551672	2572897:2572914
AYW46603.1|2529642_2531001_+|transposase	transposase	transposase	NA	NA	NA	NA
AYW46604.1|2531284_2531797_+	hypothetical protein	NA	NA	NA	NA	NA
AYW46605.1|2532491_2533529_+	hypothetical protein	NA	NA	NA	NA	NA
AYW46606.1|2533612_2533843_-	hypothetical protein	NA	NA	NA	NA	NA
AYW46607.1|2534096_2534918_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
AYW46608.1|2534960_2535488_+	hypothetical protein	NA	NA	NA	NA	NA
AYW46609.1|2535392_2536751_-|transposase	transposase	transposase	NA	NA	NA	NA
AYW46610.1|2537200_2537446_-	hypothetical protein	NA	NA	NA	NA	NA
AYW46611.1|2537633_2538503_+	UTP--glucose-1-phosphate uridylyltransferase	NA	A0A127AW70	Bacillus_phage	50.9	3.0e-75
AYW46612.1|2538561_2539392_-	hypothetical protein	NA	NA	NA	NA	NA
AYW46613.1|2539546_2541313_+	hypothetical protein	NA	NA	NA	NA	NA
AYW46614.1|2541333_2542104_+	hypothetical protein	NA	NA	NA	NA	NA
AYW46615.1|2542348_2545039_+	bifunctional acetaldehyde-CoA/alcohol dehydrogenase	NA	NA	NA	NA	NA
AYW46616.1|2545129_2546116_+	hypothetical protein	NA	NA	NA	NA	NA
AYW46617.1|2546310_2546625_+	hypothetical protein	NA	NA	NA	NA	NA
AYW46618.1|2546910_2548554_+	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AYW46619.1|2548563_2549787_+	peptidase T	NA	NA	NA	NA	NA
AYW46620.1|2549817_2550804_-	hypothetical protein	NA	NA	NA	NA	NA
AYW46621.1|2550852_2551611_-	hypothetical protein	NA	NA	NA	NA	NA
2551655:2551672	attL	ATCAGAAAAGCAAACGAT	NA	NA	NA	NA
AYW46622.1|2551755_2553090_+	maltose-6'-phosphate glucosidase	NA	NA	NA	NA	NA
AYW46623.1|2553106_2554675_+	alpha-glucoside-specific phosphotransferase enzyme IIB component	NA	NA	NA	NA	NA
AYW46624.1|2554907_2555600_+	N-acetylmannosamine-6-phosphate 2-epimerase	NA	NA	NA	NA	NA
AYW46625.1|2555809_2557600_+	cadmium-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	31.6	4.0e-74
AYW46626.1|2557929_2560011_+	transcription antiterminator BglG	NA	NA	NA	NA	NA
AYW46627.1|2560026_2560338_+	PTS ascorbate transporter subunit IIB	NA	NA	NA	NA	NA
AYW46628.1|2560357_2561641_+	PTS ascorbate transporter subunit IIC	NA	NA	NA	NA	NA
AYW46629.1|2561666_2562080_+	hypothetical protein	NA	NA	NA	NA	NA
AYW46630.1|2562092_2562971_+	ketose-bisphosphate aldolase	NA	NA	NA	NA	NA
AYW46631.1|2562963_2563575_+	kinase	NA	NA	NA	NA	NA
AYW46875.1|2563779_2564640_+	transcriptional regulator	NA	NA	NA	NA	NA
AYW46632.1|2564636_2565098_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
AYW46633.1|2565116_2565398_+	PTS galactitol transporter subunit IIB	NA	NA	NA	NA	NA
AYW46634.1|2565400_2566747_+	PTS galactitol transporter subunit IIC	NA	NA	NA	NA	NA
AYW46635.1|2566748_2566964_+	hypothetical protein	NA	NA	NA	NA	NA
AYW46636.1|2566968_2567772_+	rhamnulose-1-phosphate aldolase	NA	NA	NA	NA	NA
AYW46637.1|2568039_2568459_+	PTS fructose transporter subunit IIA	NA	NA	NA	NA	NA
AYW46638.1|2568455_2568926_+	PTS mannose/fructose/sorbose transporter subunit IIB	NA	NA	NA	NA	NA
AYW46639.1|2570543_2571095_+|integrase	integrase	integrase	D2XR58	Bacillus_phage	41.7	6.4e-31
AYW46640.1|2571383_2571563_+	hypothetical protein	NA	NA	NA	NA	NA
AYW46641.1|2571903_2572455_+	DNA starvation/stationary phase protection protein	NA	A0A0A7RTZ1	Clostridium_phage	36.8	3.6e-18
AYW46642.1|2572471_2573164_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
2572897:2572914	attR	ATCAGAAAAGCAAACGAT	NA	NA	NA	NA
AYW46643.1|2574334_2574814_-	UTRA domain-containing protein	NA	NA	NA	NA	NA
AYW46644.1|2575105_2576419_+|transposase	IS1380 family transposase	transposase	A0A1X9I6F6	Streptococcus_phage	61.8	1.3e-154
AYW46645.1|2576877_2578039_+|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	51.3	1.6e-79
AYW46646.1|2578303_2579566_-|transposase	DDE transposase	transposase	NA	NA	NA	NA
>prophage 5
CP027786	Tetragenococcus koreensis strain KCTC 3924 chromosome, complete genome	2720974	2691211	2720674	2720974	integrase,portal,terminase,tail,capsid,protease,head	uncultured_Caudovirales_phage(46.15%)	40	2690485:2690498	2694102:2694115
2690485:2690498	attL	ATAAATGCAACTTT	NA	NA	NA	NA
AYW46746.1|2691211_2692390_-|integrase	site-specific integrase	integrase	A0A1B1IMP1	Lactococcus_phage	37.9	9.1e-51
AYW46747.1|2692492_2693287_-	hypothetical protein	NA	O48432	Lactobacillus_phage	32.2	6.8e-26
AYW46878.1|2693343_2694030_-	hypothetical protein	NA	E8ZDN4	Streptococcus_phage	44.5	6.9e-43
AYW46748.1|2694196_2694442_+	phage repressor protein	NA	A0A1S5SA21	Streptococcus_phage	56.3	5.3e-14
2694102:2694115	attR	ATAAATGCAACTTT	NA	NA	NA	NA
AYW46749.1|2694444_2694660_+	hypothetical protein	NA	NA	NA	NA	NA
AYW46750.1|2694651_2694885_-	hypothetical protein	NA	NA	NA	NA	NA
AYW46751.1|2694945_2695176_+	hypothetical protein	NA	NA	NA	NA	NA
AYW46752.1|2695321_2695681_+	hypothetical protein	NA	NA	NA	NA	NA
AYW46753.1|2695777_2696023_+	hypothetical protein	NA	A0A0S2MYD6	Enterococcus_phage	49.3	1.5e-13
AYW46754.1|2696006_2696489_+	hypothetical protein	NA	A6M981	Geobacillus_virus	48.4	2.3e-32
AYW46755.1|2696531_2697218_+	DNA-binding protein	NA	A0A059T7T3	Listeria_phage	40.6	1.2e-39
AYW46756.1|2697234_2697726_+	hypothetical protein	NA	A0A0A1ELK1	Lactobacillus_phage	31.4	4.4e-15
AYW46757.1|2698112_2699951_+	hypothetical protein	NA	NA	NA	NA	NA
AYW46758.1|2699947_2701450_+	hypothetical protein	NA	W5S5P4	Pithovirus	30.2	6.0e-23
AYW46759.1|2701430_2701880_+	hypothetical protein	NA	NA	NA	NA	NA
AYW46760.1|2701892_2702135_+	hypothetical protein	NA	NA	NA	NA	NA
AYW46761.1|2702186_2702381_+	hypothetical protein	NA	NA	NA	NA	NA
AYW46762.1|2702383_2702704_+	hypothetical protein	NA	NA	NA	NA	NA
AYW46763.1|2702667_2703390_+	hypothetical protein	NA	NA	NA	NA	NA
AYW46764.1|2703391_2703583_+	hypothetical protein	NA	NA	NA	NA	NA
AYW46765.1|2703587_2703794_+	hypothetical protein	NA	NA	NA	NA	NA
AYW46766.1|2703812_2704034_+	hypothetical protein	NA	NA	NA	NA	NA
AYW46767.1|2704033_2704366_+	hypothetical protein	NA	NA	NA	NA	NA
AYW46768.1|2704362_2705349_+	DNA (cytosine-5-)-methyltransferase	NA	Q6DMX0	Streptococcus_phage	42.9	7.3e-62
AYW46769.1|2705398_2705812_+	autolysin	NA	D2IZL7	Enterococcus_phage	61.5	2.7e-42
AYW46770.1|2706454_2706805_+	endonuclease	NA	A0A2H4JI60	uncultured_Caudovirales_phage	72.6	8.9e-47
AYW46771.1|2706946_2707417_+|terminase	phage terminase small subunit P27 family	terminase	A0A2H4JH87	uncultured_Caudovirales_phage	60.9	5.2e-50
AYW46772.1|2707409_2709161_+|terminase	terminase large subunit	terminase	A0A2H4J5G3	uncultured_Caudovirales_phage	83.5	1.9e-294
AYW46773.1|2709174_2709366_+	hypothetical protein	NA	A0A2H4J9T6	uncultured_Caudovirales_phage	49.2	4.0e-09
AYW46774.1|2709365_2710592_+|portal	phage portal protein	portal	H9A113	Staphylococcus_phage	82.8	1.8e-195
AYW46775.1|2710581_2711139_+|head,protease	HK97 family phage prohead protease	head,protease	A0A2H4JA78	uncultured_Caudovirales_phage	68.6	2.8e-71
AYW46776.1|2711168_2712452_+|capsid	phage major capsid protein	capsid	A0A0N9S8J3	Staphylococcus_phage	88.9	2.0e-144
AYW46777.1|2712520_2712862_+	DNA-packaging protein	NA	A0A2H4JDD1	uncultured_Caudovirales_phage	79.6	2.5e-46
AYW46778.1|2712851_2713181_+	hypothetical protein	NA	A0A2H4J9E0	uncultured_Caudovirales_phage	78.9	4.2e-46
AYW46779.1|2713177_2713588_+	hypothetical protein	NA	A0A2H4JF04	uncultured_Caudovirales_phage	55.9	1.2e-34
AYW46780.1|2713590_2713998_+	hypothetical protein	NA	A0A2H4J9Z2	uncultured_Caudovirales_phage	77.9	5.5e-56
AYW46781.1|2714000_2714594_+|tail	phage tail protein	tail	A0A2H4JH93	uncultured_Caudovirales_phage	79.6	2.1e-80
AYW46782.1|2714683_2715439_+	hypothetical protein	NA	A0A1D6Z291	Staphylococcus_phage	61.8	4.3e-62
AYW46783.1|2715514_2715874_+	hypothetical protein	NA	A0A2H4J3M2	uncultured_Caudovirales_phage	87.5	8.0e-51
AYW46784.1|2716087_2720674_+|tail	phage tail tape measure protein	tail	A0A2H4JDT7	uncultured_Caudovirales_phage	55.1	9.8e-226
