The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP026100	Caulobacter flavus strain RHGG3 chromosome, complete genome	5659202	388399	458463	5659202	transposase,integrase,plate	Burkholderia_phage(20.0%)	55	375176:375193	463554:463571
375176:375193	attL	CTGGTCTATCTCAGCGTG	NA	NA	NA	NA
AYV45094.1|388399_389611_-|integrase	integrase	integrase	NA	NA	NA	NA
AYV45095.1|389849_391235_+	DNA (cytosine-5-)-methyltransferase	NA	K4HZD0	Acidithiobacillus_phage	42.8	3.2e-71
AYV45096.1|391231_393316_+	hypothetical protein	NA	NA	NA	NA	NA
AYV45097.1|393312_394815_+	hypothetical protein	NA	NA	NA	NA	NA
AYV45098.1|394811_400250_+	hypothetical protein	NA	NA	NA	NA	NA
AYV45099.1|400256_400703_+	very short patch repair endonuclease	NA	E5E3X5	Burkholderia_phage	51.4	2.9e-34
AYV45100.1|400752_401523_+	hypothetical protein	NA	NA	NA	NA	NA
AYV45101.1|401733_402705_-	AAA family ATPase	NA	NA	NA	NA	NA
AYV45102.1|402698_404366_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AYV45103.1|404365_405016_-	transposon DNA-invertase	NA	E5FFF9	Burkholderia_phage	47.0	7.2e-34
AYV49422.1|406069_407236_+	chromate transporter	NA	NA	NA	NA	NA
AYV45104.1|407371_408259_+	peptidase M23	NA	NA	NA	NA	NA
AYV45105.1|408255_408660_+	hypothetical protein	NA	NA	NA	NA	NA
AYV45106.1|408955_409918_-	nucleotidyltransferase	NA	NA	NA	NA	NA
AYV49423.1|410141_411401_-|integrase	integrase	integrase	NA	NA	NA	NA
AYV45107.1|411742_413131_+	hypothetical protein	NA	NA	NA	NA	NA
AYV45108.1|413132_413897_-	3-oxoacyl-ACP reductase	NA	G8EDD5	Acanthamoeba_castellanii_mamavirus	33.1	9.8e-06
AYV45109.1|413902_415228_-	histidinol dehydrogenase	NA	NA	NA	NA	NA
AYV45110.1|415326_416010_-	hypothetical protein	NA	NA	NA	NA	NA
AYV45111.1|416099_416654_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AYV45112.1|416819_417875_-	zinc-binding dehydrogenase	NA	A0A2K9L339	Tupanvirus	45.4	1.1e-74
AYV45113.1|418078_418423_-	hypothetical protein	NA	NA	NA	NA	NA
AYV45114.1|418877_420644_+	gamma-glutamyltransferase	NA	NA	NA	NA	NA
AYV45115.1|420767_421199_-	acyl-CoA thioesterase	NA	NA	NA	NA	NA
AYV45116.1|421216_421507_-	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
AYV45117.1|421658_422621_+	multidrug ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	32.6	1.6e-21
AYV45118.1|422837_423740_-	phosphorylase	NA	NA	NA	NA	NA
AYV45119.1|423876_424929_+	purine nucleoside permease	NA	NA	NA	NA	NA
AYV45120.1|424932_426249_+	guanine permease	NA	A0A0R6PHV4	Moraxella_phage	35.3	2.1e-56
AYV49424.1|426436_428113_-	recombinase family protein	NA	NA	NA	NA	NA
AYV45121.1|428479_429103_-	hypothetical protein	NA	NA	NA	NA	NA
AYV45122.1|429763_431194_+	hypothetical protein	NA	NA	NA	NA	NA
AYV45123.1|431351_432383_+	hypothetical protein	NA	NA	NA	NA	NA
AYV45124.1|432412_432949_+	hypothetical protein	NA	NA	NA	NA	NA
AYV45125.1|433044_434490_-	hypothetical protein	NA	A0A2D0ZM66	Rhodococcus_phage	40.2	1.2e-17
AYV45126.1|434591_435926_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
AYV45127.1|435922_437263_+	type VI secretion system protein TssL	NA	NA	NA	NA	NA
AYV45128.1|437263_440713_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
AYV45129.1|440718_441306_+	type VI secretion system-associated protein TagF	NA	NA	NA	NA	NA
AYV45130.1|441130_442048_+	serine/threonine protein phosphatase	NA	NA	NA	NA	NA
AYV45131.1|442124_444332_+	hypothetical protein	NA	A0A1V0SBL0	Catovirus	27.6	9.4e-09
AYV45132.1|444342_444987_-	hypothetical protein	NA	NA	NA	NA	NA
AYV45133.1|444913_445186_-	hypothetical protein	NA	NA	NA	NA	NA
AYV45134.1|445194_446007_-	hypothetical protein	NA	NA	NA	NA	NA
AYV45135.1|446041_447481_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA	NA
AYV45136.1|447477_448053_-	hypothetical protein	NA	NA	NA	NA	NA
AYV45137.1|448063_450073_-	hypothetical protein	NA	A0A077K8Q4	Ralstonia_phage	27.5	3.6e-39
AYV45138.1|450440_451508_+	hypothetical protein	NA	NA	NA	NA	NA
AYV49425.1|451613_452111_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
AYV45139.1|452128_453628_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
AYV45140.1|453681_454197_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA	NA
AYV45141.1|454208_455009_+	virulence protein SciE type	NA	NA	NA	NA	NA
AYV45142.1|455010_455538_+	hypothetical protein	NA	NA	NA	NA	NA
AYV45143.1|455542_457429_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
AYV45144.1|457392_458463_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
463554:463571	attR	CTGGTCTATCTCAGCGTG	NA	NA	NA	NA
>prophage 2
CP026100	Caulobacter flavus strain RHGG3 chromosome, complete genome	5659202	1352743	1359881	5659202		Enterobacteria_phage(33.33%)	6	NA	NA
AYV45926.1|1352743_1353397_-	fructose-6-phosphate aldolase	NA	A0A127KMN5	Cyanophage	52.9	1.3e-54
AYV45927.1|1353469_1354345_-	glucose-1-phosphate thymidylyltransferase	NA	I7I009	Enterobacteria_phage	53.8	2.1e-84
AYV49473.1|1354341_1355223_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	31.2	2.5e-21
AYV45928.1|1355222_1356272_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	48.5	8.5e-85
AYV45929.1|1356420_1357749_-	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA	A0A1V0SH58	Hokovirus	29.2	2.4e-28
AYV45930.1|1357844_1359881_-	NAD(+) synthase	NA	A0A2L0UZF5	Agrobacterium_phage	25.7	8.7e-09
>prophage 3
CP026100	Caulobacter flavus strain RHGG3 chromosome, complete genome	5659202	2032527	2047711	5659202	capsid,tail,head,portal,protease	Paracoccus_phage(22.22%)	21	NA	NA
AYV46480.1|2032527_2033664_+|portal	phage portal protein	portal	W8ECU7	Geobacillus_phage	41.6	1.2e-68
AYV46481.1|2033820_2034069_+	hypothetical protein	NA	NA	NA	NA	NA
AYV46482.1|2034065_2034464_+|head,protease	HK97 family phage prohead protease	head,protease	A0A0U2BX10	Paracoccus_phage	45.0	6.0e-23
AYV46483.1|2034617_2035853_+|capsid	phage major capsid protein	capsid	Q3HQT0	Burkholderia_phage	42.5	3.1e-78
AYV46484.1|2036009_2036282_+|head,tail	phage gp6-like head-tail connector protein	head,tail	NA	NA	NA	NA
AYV46485.1|2036278_2036674_+	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
AYV46486.1|2036699_2037116_+|tail	phage major tail protein, TP901-1 family	tail	NA	NA	NA	NA
AYV46487.1|2037129_2037411_+	hypothetical protein	NA	NA	NA	NA	NA
AYV49509.1|2037425_2037596_+|tail	phage tail assembly chaperone	tail	NA	NA	NA	NA
AYV46488.1|2037592_2038117_+|tail	phage tail tape measure protein	tail	NA	NA	NA	NA
AYV46489.1|2038113_2038533_-	hypothetical protein	NA	NA	NA	NA	NA
AYV46490.1|2038529_2038952_-	hypothetical protein	NA	NA	NA	NA	NA
AYV46491.1|2038957_2039371_-	hypothetical protein	NA	NA	NA	NA	NA
AYV46492.1|2039446_2039905_-	hypothetical protein	NA	NA	NA	NA	NA
AYV46493.1|2039984_2040500_-	hypothetical protein	NA	NA	NA	NA	NA
AYV46494.1|2040578_2041223_+	TIGR02217 family protein	NA	A0A0B5A2K3	Paracoccus_phage	42.6	1.4e-42
AYV46495.1|2041222_2041873_+	hypothetical protein	NA	A0A1V0DY93	Dinoroseobacter_phage	37.6	1.4e-21
AYV46496.1|2041869_2042322_+	peptidase P60	NA	F4YXU4	Roseobacter_phage	47.9	1.7e-29
AYV46497.1|2042321_2046089_+	hypothetical protein	NA	A0A0K1Y6G6	Rhodobacter_phage	37.5	1.4e-201
AYV46498.1|2046175_2047108_+	molecular chaperone DnaJ	NA	A0A2L0UZR4	Agrobacterium_phage	26.3	2.0e-16
AYV46499.1|2047123_2047711_-	AraC family transcriptional regulator	NA	A0A291LAM3	Bordetella_phage	37.9	1.1e-09
>prophage 4
CP026100	Caulobacter flavus strain RHGG3 chromosome, complete genome	5659202	5098617	5122747	5659202	tRNA	uncultured_Mediterranean_phage(75.0%)	25	NA	NA
AYV48924.1|5098617_5099733_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	50.6	1.1e-98
AYV48925.1|5099733_5100846_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
AYV48926.1|5100995_5101976_+	endonuclease	NA	NA	NA	NA	NA
AYV48927.1|5101956_5102535_-	phosphohydrolase	NA	NA	NA	NA	NA
AYV48928.1|5102590_5103058_-	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	54.1	2.8e-35
AYV48929.1|5103153_5104035_-	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	33.7	3.6e-20
AYV48930.1|5104050_5104884_-	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	35.9	1.8e-21
AYV48931.1|5105014_5105503_-	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	48.3	3.2e-34
AYV48932.1|5105525_5108285_-	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	33.5	5.5e-99
AYV49718.1|5108400_5108925_+	superoxide dismutase	NA	Q9MC02	Salmonella_phage	36.3	5.1e-14
AYV48933.1|5109166_5111062_-	peptidase M24	NA	D6QWN5	uncultured_phage	37.2	9.3e-05
AYV48934.1|5111167_5111827_-	protein-L-isoaspartate O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	48.0	2.3e-35
AYV48935.1|5111826_5112645_-	5'/3'-nucleotidase SurE	NA	NA	NA	NA	NA
AYV48936.1|5112641_5113937_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	54.8	2.7e-96
AYV48937.1|5114199_5115102_-	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	38.4	2.8e-44
AYV48938.1|5115098_5115722_-	twin-arginine translocase subunit TatB	NA	NA	NA	NA	NA
AYV48939.1|5115824_5116049_-	twin-arginine translocase TatA/TatE family subunit	NA	NA	NA	NA	NA
AYV48940.1|5116185_5116851_-	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	46.7	3.2e-37
AYV48941.1|5117014_5117836_-	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	31.4	5.9e-25
AYV48942.1|5117832_5118861_-	beta-N-acetylhexosaminidase	NA	A0A1B1IVS3	uncultured_Mediterranean_phage	44.4	1.1e-25
AYV48943.1|5118872_5119673_-	sporulation protein	NA	NA	NA	NA	NA
AYV48944.1|5119807_5120992_-	deoxyguanosinetriphosphate triphosphohydrolase	NA	NA	NA	NA	NA
AYV48945.1|5121069_5121402_+	iron-sulfur cluster insertion protein ErpA	NA	A0A1B1IT29	uncultured_Mediterranean_phage	38.1	3.4e-11
AYV48946.1|5121469_5121553_+	hypothetical protein	NA	NA	NA	NA	NA
AYV48947.1|5121649_5122747_+	3-deoxy-7-phosphoheptulonate synthase	NA	S4W5F1	Pandoravirus	47.6	1.2e-81
