prefix	bacteria_id	bacteria_def	genome_size	prophage_start	prophage_end	method	key_proteins	best_hit_species	CDS_number	attl_region	attr_region
GCA_003719775.1_ASM371977v1	CP033510	Shigella flexneri strain 2016AM-0877 chromosome, complete genome	4719160	65015	94008	DBSCAN-SWA	transposase	Shigella_phage(50.0%)	27	NA	NA
GCA_003719775.1_ASM371977v1	CP033510	Shigella flexneri strain 2016AM-0877 chromosome, complete genome	4719160	99496	146315	DBSCAN-SWA	transposase,tRNA	Acinetobacter_phage(22.22%)	29	NA	NA
GCA_003719775.1_ASM371977v1	CP033510	Shigella flexneri strain 2016AM-0877 chromosome, complete genome	4719160	180222	229576	DBSCAN-SWA	transposase,tail,tRNA	Enterobacteria_phage(50.0%)	49	NA	NA
GCA_003719775.1_ASM371977v1	CP033510	Shigella flexneri strain 2016AM-0877 chromosome, complete genome	4719160	299891	357105	DBSCAN-SWA	transposase,holin,tail,integrase	Stx2-converting_phage(28.0%)	50	317925:317984	356210:357807
GCA_003719775.1_ASM371977v1	CP033510	Shigella flexneri strain 2016AM-0877 chromosome, complete genome	4719160	384129	390436	DBSCAN-SWA		Enterobacteria_phage(50.0%)	6	NA	NA
GCA_003719775.1_ASM371977v1	CP033510	Shigella flexneri strain 2016AM-0877 chromosome, complete genome	4719160	883315	950084	DBSCAN-SWA	transposase,tail,tRNA	Aeromonas_phage(11.11%)	55	NA	NA
GCA_003719775.1_ASM371977v1	CP033510	Shigella flexneri strain 2016AM-0877 chromosome, complete genome	4719160	1085332	1093126	DBSCAN-SWA	transposase	Pseudomonas_phage(50.0%)	6	NA	NA
GCA_003719775.1_ASM371977v1	CP033510	Shigella flexneri strain 2016AM-0877 chromosome, complete genome	4719160	1143675	1224942	DBSCAN-SWA	transposase,protease,integrase,tRNA	Bacillus_phage(10.53%)	60	1206925:1206941	1218062:1218078
GCA_003719775.1_ASM371977v1	CP033510	Shigella flexneri strain 2016AM-0877 chromosome, complete genome	4719160	1279470	1342695	DBSCAN-SWA	transposase,protease,tRNA	Shigella_phage(33.33%)	49	NA	NA
GCA_003719775.1_ASM371977v1	CP033510	Shigella flexneri strain 2016AM-0877 chromosome, complete genome	4719160	2159728	2182530	DBSCAN-SWA	transposase	Shigella_phage(40.0%)	17	NA	NA
GCA_003719775.1_ASM371977v1	CP033510	Shigella flexneri strain 2016AM-0877 chromosome, complete genome	4719160	3046752	3169397	DBSCAN-SWA	protease,plate,terminase,portal,transposase,coat,tRNA	Escherichia_phage(19.35%)	104	NA	NA
GCA_003719775.1_ASM371977v1	CP033510	Shigella flexneri strain 2016AM-0877 chromosome, complete genome	4719160	3191028	3320872	DBSCAN-SWA	transposase,integrase,tail,tRNA	Shigella_phage(28.26%)	103	3263789:3263804	3274481:3274496
GCA_003719775.1_ASM371977v1	CP033510	Shigella flexneri strain 2016AM-0877 chromosome, complete genome	4719160	3604271	3693918	DBSCAN-SWA	head,tail,terminase,capsid,transposase,holin,tRNA	Enterobacteria_phage(33.96%)	89	NA	NA
GCA_003719775.1_ASM371977v1	CP033510	Shigella flexneri strain 2016AM-0877 chromosome, complete genome	4719160	3809090	3923511	DBSCAN-SWA	transposase,protease,integrase,tRNA	Escherichia_phage(13.95%)	86	3811786:3811845	3926915:3927388
GCA_003719775.1_ASM371977v1	CP033510	Shigella flexneri strain 2016AM-0877 chromosome, complete genome	4719160	3965828	4087815	DBSCAN-SWA	tail,protease,integrase,transposase,holin	Acinetobacter_phage(14.29%)	113	4036556:4036615	4055057:4059049
GCA_003719775.1_ASM371977v1	CP033510	Shigella flexneri strain 2016AM-0877 chromosome, complete genome	4719160	4164381	4173717	DBSCAN-SWA	head,tail,protease,terminase,portal	uncultured_Caudovirales_phage(87.5%)	12	NA	NA
GCA_003719775.1_ASM371977v1	CP033510	Shigella flexneri strain 2016AM-0877 chromosome, complete genome	4719160	4369359	4451058	DBSCAN-SWA	tail,protease,integrase,transposase,tRNA	Escherichia_phage(46.15%)	76	4387976:4388035	4411954:4412015
GCA_003719775.1_ASM371977v1	CP033510	Shigella flexneri strain 2016AM-0877 chromosome, complete genome	4719160	4560213	4605500	DBSCAN-SWA	transposase,holin	Shigella_phage(22.22%)	48	NA	NA
GCA_003719775.1_ASM371977v1	CP033511	Shigella flexneri strain 2016AM-0877 plasmid p2016AM-0877, complete sequence	222142	0	143674	DBSCAN-SWA	protease,transposase,integrase,tRNA	Stx2-converting_phage(30.43%)	121	4688:4747	153002:153301
GCA_003719775.1_ASM371977v1	CP033511	Shigella flexneri strain 2016AM-0877 plasmid p2016AM-0877, complete sequence	222142	151485	159008	DBSCAN-SWA	transposase	Escherichia_phage(50.0%)	6	NA	NA
GCA_003719775.1_ASM371977v1	CP033511	Shigella flexneri strain 2016AM-0877 plasmid p2016AM-0877, complete sequence	222142	163761	164172	DBSCAN-SWA	transposase	Escherichia_phage(100.0%)	1	NA	NA
GCA_003719775.1_ASM371977v1	CP033511	Shigella flexneri strain 2016AM-0877 plasmid p2016AM-0877, complete sequence	222142	179102	187372	DBSCAN-SWA	protease,transposase	Stx2-converting_phage(33.33%)	6	NA	NA
GCA_003719775.1_ASM371977v1	CP033511	Shigella flexneri strain 2016AM-0877 plasmid p2016AM-0877, complete sequence	222142	207674	219716	DBSCAN-SWA	transposase	Stx2-converting_phage(42.86%)	12	NA	NA
