The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP033460	Staphylococcus sp. SDB 2975 chromosome, complete genome	2691850	802071	811277	2691850		uncultured_Caudovirales_phage(66.67%)	8	NA	NA
AYU54553.1|802071_803592_-	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	37.1	7.5e-74
AYU54554.1|803750_804254_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	65.6	6.0e-52
AYU54555.1|804256_805147_-	DMT family transporter	NA	NA	NA	NA	NA
AYU54556.1|806029_806422_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	67.7	3.0e-43
AYU54557.1|806393_808499_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	87.3	0.0e+00
AYU54558.1|808637_809615_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	93.5	3.5e-173
AYU54559.1|809704_809896_+	hypothetical protein	NA	NA	NA	NA	NA
AYU56352.1|810308_811277_+	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	77.5	2.4e-134
>prophage 2
CP033460	Staphylococcus sp. SDB 2975 chromosome, complete genome	2691850	891649	940918	2691850	terminase,protease,portal,tail,capsid,holin,head,integrase	uncultured_Caudovirales_phage(56.9%)	65	885055:885070	932833:932848
885055:885070	attL	AAATTAAATGATGAAA	NA	NA	NA	NA
AYU54634.1|891649_892888_+	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	44.6	6.7e-105
AYU54635.1|892877_893348_+	SUF system NifU family Fe-S cluster assembly protein	NA	NA	NA	NA	NA
AYU54636.1|893562_894960_+	Fe-S cluster assembly protein SufB	NA	NA	NA	NA	NA
AYU54637.1|895027_896077_-|integrase	site-specific integrase	integrase	A0A2H4J4I8	uncultured_Caudovirales_phage	88.5	1.8e-183
AYU54638.1|896213_896831_+	ATPase	NA	A0A2I6PD89	Staphylococcus_phage	59.4	4.3e-60
AYU54639.1|897026_897209_-	hypothetical protein	NA	A0A0H3U4Z4	Staphylococcus_phage	66.7	3.9e-14
AYU54640.1|897289_898081_-	hypothetical protein	NA	A0A1W6JQG6	Staphylococcus_phage	43.3	3.0e-05
AYU54641.1|898134_898773_-	helix-turn-helix domain-containing protein	NA	U3PBN8	Staphylococcus_phage	82.1	4.4e-100
AYU54642.1|898966_899215_+	XRE family transcriptional regulator	NA	U3PCY2	Staphylococcus_phage	83.6	8.6e-28
AYU54643.1|899229_899982_+	Rha family transcriptional regulator	NA	A0A2H4J8U5	uncultured_Caudovirales_phage	84.3	3.9e-116
AYU54644.1|899996_900182_+	hypothetical protein	NA	NA	NA	NA	NA
AYU54645.1|900421_900676_+	hypothetical protein	NA	A0A2H4J5J2	uncultured_Caudovirales_phage	87.5	8.5e-31
AYU54646.1|900689_900935_-	hypothetical protein	NA	A0A2H4JD95	uncultured_Caudovirales_phage	92.6	4.6e-34
AYU54647.1|901000_901219_+	hypothetical protein	NA	A0A1J0MG48	Staphylococcus_phage	70.8	2.6e-20
AYU54648.1|901234_901447_+	hypothetical protein	NA	Q4ZCA4	Staphylococcus_virus	76.1	4.6e-22
AYU54649.1|901542_901779_+	DUF2483 domain-containing protein	NA	A0A2H4J633	uncultured_Caudovirales_phage	73.3	3.5e-23
AYU54650.1|901771_902398_+	DUF1071 domain-containing protein	NA	A1BTZ3	Staphylococcus_virus	93.8	1.7e-109
AYU54651.1|902390_902807_+	single-stranded DNA-binding protein	NA	I6SN68	Staphylococcus_virus	92.1	1.0e-65
AYU54652.1|902821_903502_+	hypothetical protein	NA	A0A2H4J565	uncultured_Caudovirales_phage	79.6	4.8e-105
AYU54653.1|903488_903791_+	hypothetical protein	NA	NA	NA	NA	NA
AYU54654.1|903795_904545_+	DnaD domain protein	NA	A9CR67	Staphylococcus_phage	56.6	1.2e-72
AYU54655.1|904544_904901_+	hypothetical protein	NA	H9A0Z2	Staphylococcus_phage	51.8	1.5e-25
AYU54656.1|904893_906126_+	damage-inducible protein	NA	A0A2H4JFD2	uncultured_Caudovirales_phage	63.1	5.6e-144
AYU54657.1|906122_906353_+	hypothetical protein	NA	A0A2H4J7L3	uncultured_Caudovirales_phage	47.8	9.4e-13
AYU54658.1|906327_906516_+	hypothetical protein	NA	NA	NA	NA	NA
AYU54659.1|906518_907040_+	hypothetical protein	NA	Q4ZC91	Staphylococcus_virus	28.8	3.5e-15
AYU54660.1|907040_907538_+	DUF3310 domain-containing protein	NA	A0A2R3ZXJ2	Staphylococcus_phage	50.7	1.7e-11
AYU54661.1|907530_907983_+	hypothetical protein	NA	NA	NA	NA	NA
AYU54662.1|908164_908359_+	hypothetical protein	NA	Q4ZC85	Staphylococcus_virus	84.1	2.4e-25
AYU54663.1|908355_908601_+	hypothetical protein	NA	A0A2H4JHN5	uncultured_Caudovirales_phage	51.9	1.4e-17
AYU54664.1|908600_908873_+	XRE family transcriptional regulator	NA	A0A2H4JBP6	uncultured_Caudovirales_phage	39.3	7.5e-09
AYU54665.1|908865_909165_+	hypothetical protein	NA	U3PBR4	Staphylococcus_phage	86.9	1.1e-42
AYU54666.1|909209_909431_+	XRE family transcriptional regulator	NA	A0A2H4JCF9	uncultured_Caudovirales_phage	54.3	3.8e-11
AYU54667.1|909427_909613_+	transcriptional regulator	NA	Q4ZC79	Staphylococcus_virus	58.2	1.4e-11
AYU54668.1|909612_910119_+	hypothetical protein	NA	A0A2H4J5F6	uncultured_Caudovirales_phage	53.3	3.3e-34
AYU54669.1|910122_910305_+	hypothetical protein	NA	Q4ZC78	Staphylococcus_virus	55.2	8.8e-06
AYU54670.1|910301_910772_+	Holliday junction resolvase RecU	NA	H9A0M5	Staphylococcus_phage	57.1	3.5e-46
AYU54671.1|910821_911268_+	transcriptional regulator	NA	A0A2H4JB30	uncultured_Caudovirales_phage	70.9	2.4e-57
AYU56359.1|911923_912286_+	HNH endonuclease	NA	H9A108	Staphylococcus_phage	94.9	4.6e-62
AYU54672.1|912450_912921_+|terminase	phage terminase small subunit P27 family	terminase	H9A110	Staphylococcus_phage	98.1	6.7e-82
AYU54673.1|915126_915321_+	hypothetical protein	NA	A0A2H4J4I4	uncultured_Caudovirales_phage	95.3	4.5e-24
AYU54674.1|915320_916556_+|portal	phage portal protein	portal	H9A113	Staphylococcus_phage	98.5	9.3e-232
AYU54675.1|916542_917100_+|head,protease	HK97 family phage prohead protease	head,protease	A0A2H4JBY8	uncultured_Caudovirales_phage	96.8	2.5e-99
AYU54676.1|917141_918503_+|capsid	phage major capsid protein	capsid	A0A2H4J7I3	uncultured_Caudovirales_phage	94.3	3.2e-164
AYU54677.1|918521_918863_+|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2H4JB77	uncultured_Caudovirales_phage	91.1	3.1e-52
AYU54678.1|918852_919182_+	hypothetical protein	NA	A0A2H4JGE5	uncultured_Caudovirales_phage	89.9	1.3e-52
AYU54679.1|919178_919583_+	hypothetical protein	NA	A0A2H4JF04	uncultured_Caudovirales_phage	98.5	1.9e-69
AYU54680.1|919587_919992_+	hypothetical protein	NA	A0A2H4JH09	uncultured_Caudovirales_phage	92.5	1.8e-67
AYU54681.1|920004_920631_+|tail	phage tail protein	tail	A0A2H4JH93	uncultured_Caudovirales_phage	94.7	7.3e-108
AYU54682.1|920649_920835_+	hypothetical protein	NA	A0A2H4J6A9	uncultured_Caudovirales_phage	91.8	9.5e-24
AYU54683.1|920898_921261_+	hypothetical protein	NA	A0A2H4J9U5	uncultured_Caudovirales_phage	96.7	1.1e-58
AYU54684.1|921474_926154_+|tail	phage tail tape measure protein	tail	A0A2H4JDT7	uncultured_Caudovirales_phage	73.7	0.0e+00
AYU54685.1|926156_926987_+|tail	phage tail family protein	tail	A0A2H4JBE0	uncultured_Caudovirales_phage	93.8	8.1e-155
AYU54686.1|926996_929528_+	hypothetical protein	NA	A0A2H4JGI7	uncultured_Caudovirales_phage	93.7	0.0e+00
AYU54687.1|929534_930059_+	hypothetical protein	NA	A0A2H4JEI3	uncultured_Caudovirales_phage	55.2	2.7e-55
AYU54688.1|930073_932137_+	hypothetical protein	NA	A0A2H4JFY2	uncultured_Caudovirales_phage	89.7	7.6e-279
AYU54689.1|932136_933564_+	DUF2479 domain-containing protein	NA	A0A2H4J9N1	uncultured_Caudovirales_phage	71.4	1.4e-154
932833:932848	attR	AAATTAAATGATGAAA	NA	NA	NA	NA
AYU54690.1|933575_934010_+	hypothetical protein	NA	A0A2H4J9L3	uncultured_Caudovirales_phage	94.2	3.7e-50
AYU54691.1|934013_934169_+	XkdX family protein	NA	A0A2H4JD72	uncultured_Caudovirales_phage	98.0	8.8e-23
AYU54692.1|934205_934628_+	hypothetical protein	NA	A0A2H4JID2	uncultured_Caudovirales_phage	72.9	1.1e-54
AYU54693.1|934614_935013_+	hypothetical protein	NA	A0A2H4JCM1	uncultured_Caudovirales_phage	89.4	3.0e-59
AYU56360.1|935070_935544_+|holin	phage holin	holin	U3PJ27	Staphylococcus_phage	80.9	3.9e-69
AYU54694.1|935533_936967_+	CHAP domain-containing protein	NA	A0A1W6JQB6	Staphylococcus_phage	86.8	4.2e-244
AYU54695.1|937626_938277_+	zinc-ribbon domain-containing protein	NA	NA	NA	NA	NA
AYU54696.1|938287_940918_+	AAA family ATPase	NA	S5MNT2	Brevibacillus_phage	35.9	1.6e-42
>prophage 3
CP033460	Staphylococcus sp. SDB 2975 chromosome, complete genome	2691850	1109777	1120764	2691850		Prochlorococcus_phage(33.33%)	11	NA	NA
AYU54847.1|1109777_1110635_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	38.4	8.4e-38
AYU54848.1|1110843_1111326_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	45.3	2.8e-22
AYU54849.1|1111312_1112440_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
AYU54850.1|1112439_1113144_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	E3SPA9	Prochlorococcus_phage	45.9	2.7e-50
AYU54851.1|1113143_1113410_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	A0A1B1IU82	uncultured_Mediterranean_phage	35.0	2.9e-05
AYU54852.1|1113409_1114081_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
AYU54853.1|1114073_1116263_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.8	1.9e-139
AYU54854.1|1116241_1117663_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.0	2.5e-47
AYU54855.1|1117667_1118705_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.2	1.2e-67
AYU54856.1|1118701_1119268_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	39.7	1.9e-30
AYU54857.1|1119285_1120764_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH	NA	Q58MG4	Prochlorococcus_phage	48.2	9.6e-74
>prophage 4
CP033460	Staphylococcus sp. SDB 2975 chromosome, complete genome	2691850	1203287	1219280	2691850	coat,terminase,integrase	uncultured_Caudovirales_phage(55.56%)	22	1200183:1200197	1221140:1221154
1200183:1200197	attL	AAAAAAGATAATCAA	NA	NA	NA	NA
AYU54939.1|1203287_1203905_+	ATPase	NA	A0A2I6PD89	Staphylococcus_phage	58.9	3.6e-59
AYU54940.1|1203901_1204087_-	hypothetical protein	NA	NA	NA	NA	NA
AYU54941.1|1205542_1205980_+	DUF3102 domain-containing protein	NA	A0A2H4JAH5	uncultured_Caudovirales_phage	67.8	1.8e-36
AYU54942.1|1206459_1206786_-	sigma-70 family RNA polymerase sigma factor	NA	A0A2H4JB14	uncultured_Caudovirales_phage	84.4	8.6e-44
AYU54943.1|1206782_1207100_-	hypothetical protein	NA	A0A2H4JEA5	uncultured_Caudovirales_phage	87.6	2.0e-45
AYU54944.1|1207096_1207630_-|coat	spore coat protein	coat	A0A2H4JB26	uncultured_Caudovirales_phage	88.7	6.7e-86
AYU54945.1|1207690_1208164_-|terminase	phage terminase small subunit P27 family	terminase	A0A2H4JB21	uncultured_Caudovirales_phage	91.7	8.3e-72
AYU54946.1|1209884_1210343_-	hypothetical protein	NA	A0A2H4JGU4	uncultured_Caudovirales_phage	93.4	1.1e-73
AYU54947.1|1210355_1210976_-	hypothetical protein	NA	A0A2H4JFF8	uncultured_Caudovirales_phage	81.1	3.5e-86
AYU54948.1|1210968_1211337_-	pathogenicity island protein	NA	Q4ZE66	Staphylococcus_phage	55.7	3.4e-28
AYU54949.1|1211711_1212044_-	hypothetical protein	NA	A0A2H4JHE6	uncultured_Caudovirales_phage	82.2	4.3e-43
AYU54950.1|1212356_1212554_-	hypothetical protein	NA	NA	NA	NA	NA
AYU54951.1|1212822_1214487_-	DUF927 domain-containing protein	NA	Q4ZE73	Staphylococcus_phage	44.7	7.3e-139
AYU54952.1|1214491_1215349_-	mobile element-associated protein	NA	A0A2H4JEH3	uncultured_Caudovirales_phage	55.7	1.5e-90
AYU54953.1|1215435_1215735_-	DUF1474 family protein	NA	A0A2H4JB50	uncultured_Caudovirales_phage	65.7	6.9e-32
AYU54954.1|1215829_1216189_-	pathogenicity island protein	NA	NA	NA	NA	NA
AYU54955.1|1216191_1216395_-	pathogenicity island protein	NA	A0A1W6JQF4	Staphylococcus_phage	70.1	2.0e-22
AYU54956.1|1216411_1216657_-	DUF771 domain-containing protein	NA	NA	NA	NA	NA
AYU54957.1|1216670_1217312_-	phage repressor protein	NA	A0A1W6JPC3	Staphylococcus_phage	78.4	3.3e-87
AYU54958.1|1217343_1217559_-	XRE family transcriptional regulator	NA	Q9ZXD1	Bacillus_phage	43.5	8.0e-06
AYU54959.1|1217694_1218216_+	XRE family transcriptional regulator	NA	A0A1W6JPB6	Staphylococcus_phage	44.6	9.9e-34
AYU54960.1|1218224_1219280_+|integrase	site-specific integrase	integrase	A0A0K1LKK4	Staphylococcus_phage	41.3	3.6e-67
1221140:1221154	attR	TTGATTATCTTTTTT	NA	NA	NA	NA
>prophage 5
CP033460	Staphylococcus sp. SDB 2975 chromosome, complete genome	2691850	1580610	1589250	2691850		Bacillus_phage(33.33%)	9	NA	NA
AYU55283.1|1580610_1581993_-	ATP-dependent DNA helicase RecQ	NA	A0A0G2Y8K9	Acanthamoeba_polyphaga_mimivirus	35.2	4.6e-62
AYU55284.1|1581995_1582949_-	hypothetical protein	NA	NA	NA	NA	NA
AYU55285.1|1583055_1583304_+	ferredoxin	NA	A0A127AYY7	Bacillus_phage	53.3	2.0e-16
AYU55286.1|1583491_1584040_-	ECF transporter S component	NA	NA	NA	NA	NA
AYU55287.1|1584420_1586172_-	HAMP domain-containing protein	NA	A0A1V0SGX0	Hokovirus	31.8	5.3e-23
AYU55288.1|1586152_1586875_-	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	41.6	3.5e-45
AYU55289.1|1587196_1587934_-	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
AYU55290.1|1587926_1588475_-	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	31.0	9.8e-08
AYU55291.1|1588458_1589250_-	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	25.4	1.9e-07
>prophage 6
CP033460	Staphylococcus sp. SDB 2975 chromosome, complete genome	2691850	1830313	1861803	2691850	tRNA	Staphylococcus_phage(92.59%)	33	NA	NA
AYU55515.1|1830313_1831570_+	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2H4PQX1	Staphylococcus_phage	71.7	1.7e-39
AYU55516.1|1831626_1831944_-	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	69.5	7.8e-34
AYU55517.1|1831964_1834379_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	85.4	0.0e+00
AYU55518.1|1834711_1835890_-	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	74.2	3.3e-162
AYU55519.1|1836145_1837102_+	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	83.1	4.7e-66
AYU55520.1|1837106_1837664_+	methyltransferase domain-containing protein	NA	A0A2H4PQV0	Staphylococcus_phage	61.1	5.6e-59
AYU55521.1|1837735_1838692_-	L-lactate dehydrogenase	NA	NA	NA	NA	NA
AYU55522.1|1838928_1839759_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AYU55523.1|1840014_1841010_+	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	63.6	3.7e-114
AYU55524.1|1841076_1841538_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	79.7	5.1e-58
AYU55525.1|1841570_1842752_-	GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	71.2	2.9e-166
AYU55526.1|1842767_1843400_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	62.9	1.5e-71
AYU55527.1|1843406_1844456_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	58.9	7.7e-118
AYU55528.1|1844867_1846349_-	pyridine nucleotide-disulfide oxidoreductase	NA	A0A2H4PQX2	Staphylococcus_phage	70.2	1.3e-14
AYU55529.1|1846481_1847327_-	autolysin	NA	A0A1W6JNR1	Staphylococcus_phage	41.3	6.1e-41
AYU55530.1|1847641_1847863_-	hypothetical protein	NA	NA	NA	NA	NA
AYU55531.1|1848071_1848566_+	RNA polymerase subunit sigma	NA	A0A2H4PQT5	Staphylococcus_phage	40.9	7.0e-21
AYU55532.1|1848567_1849011_+	hypothetical protein	NA	NA	NA	NA	NA
AYU55533.1|1848994_1849447_-	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	51.0	4.3e-17
AYU55534.1|1849567_1850284_-	transaldolase	NA	A0A127KLL7	Cyanophage	36.0	3.3e-19
AYU55535.1|1850470_1850776_+	hypothetical protein	NA	NA	NA	NA	NA
AYU55536.1|1850845_1851217_+	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	65.3	3.6e-38
AYU56381.1|1851221_1851566_+	CrcB family protein	NA	NA	NA	NA	NA
AYU55537.1|1851621_1852545_-	ADP-ribosylglycohydrolase family protein	NA	A0A1S6UB21	Serratia_phage	31.0	2.3e-33
AYU55538.1|1852554_1853397_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	69.7	8.3e-115
AYU55539.1|1853531_1854431_-	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	75.2	4.7e-100
AYU55540.1|1854527_1855724_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	81.4	5.5e-189
AYU55541.1|1856110_1857703_+	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	78.8	3.8e-254
AYU55542.1|1857844_1858615_-	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	69.0	2.1e-96
AYU55543.1|1858598_1859072_-	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	49.7	3.3e-36
AYU55544.1|1859161_1859410_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	70.4	2.3e-28
AYU55545.1|1859400_1860411_-	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	53.4	5.1e-95
AYU55546.1|1860414_1861803_-	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	59.1	6.7e-162
