The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP029906	Salmonella enterica subsp. enterica serovar Typhi strain 343077_267164 chromosome, complete genome	4775386	930444	937756	4775386	protease,integrase	Dickeya_phage(16.67%)	6	931695:931709	943061:943075
AYT94219.1|930444_931563_+	hypothetical protein	NA	A0A140XAI1	Dickeya_phage	39.8	8.1e-09
AYT94220.1|931559_933506_+	macrolide transporter ATP-binding protein/permease	NA	G9BWD6	Planktothrix_phage	43.1	2.0e-39
931695:931709	attL	GGAAAATCAACGCTG	NA	NA	NA	NA
AYT94221.1|933635_933857_-	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.2	9.3e-18
AYT94222.1|934180_934501_+|protease	ATP-dependent Clp protease adaptor protein	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	4.5e-13
AYT94223.1|934531_936808_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.2	1.8e-164
AYT94224.1|937378_937756_-|integrase	integrase	integrase	A0A077KET4	Ralstonia_phage	41.0	1.2e-20
943061:943075	attR	CAGCGTTGATTTTCC	NA	NA	NA	NA
>prophage 2
CP029906	Salmonella enterica subsp. enterica serovar Typhi strain 343077_267164 chromosome, complete genome	4775386	1008843	1086156	4775386	protease,tail,integrase,transposase,terminase	Salmonella_phage(73.33%)	93	990922:990941	1061517:1061536
990922:990941	attL	AACGGCGCCGGGAAATCCAC	NA	NA	NA	NA
AYT94275.1|1008843_1010184_-|integrase	integrase	integrase	S4TSP2	Salmonella_phage	99.8	7.9e-261
AYT94276.1|1010180_1010429_-	excisionase	NA	S4TND0	Salmonella_phage	100.0	4.7e-42
AYT94277.1|1010469_1010715_-	bacteriophage protein	NA	S4TR31	Salmonella_phage	96.2	1.3e-36
AYT94278.1|1010714_1011596_-	DNA methylase	NA	A0A0M4R347	Salmonella_phage	93.0	1.2e-153
AYT94279.1|1011592_1012657_-	bacteriophage protein	NA	T1SBJ4	Salmonella_phage	74.6	6.3e-152
AYT94280.1|1012734_1013415_-	exonuclease	NA	A0A0M3ULE0	Salmonella_phage	98.7	1.9e-130
AYT94281.1|1013411_1014197_-	bacteriophage recombination protein	NA	A0A0M4RD39	Salmonella_phage	99.6	9.7e-150
AYT94282.1|1014202_1014499_-	host-nuclease inhibitor protein	NA	A0A0M5M5Z9	Salmonella_phage	96.9	4.4e-47
AYT94283.1|1014589_1014790_-	prophage Kil protein	NA	G8C7T2	Escherichia_phage	48.4	2.4e-12
AYT94284.1|1015078_1015483_-	DNA-binding protein	NA	H6WRX4	Salmonella_phage	99.3	7.1e-72
AYT94285.1|1015814_1016189_+	DNA-binding protein	NA	S4TTD7	Salmonella_phage	99.2	3.9e-64
AYT94286.1|1016273_1017257_+	bacteriophage protein	NA	H6WRX7	Salmonella_phage	99.7	2.1e-162
AYT94287.1|1017259_1018009_+	DNA replication protein	NA	S4TNF5	Salmonella_phage	99.6	3.6e-138
AYT94288.1|1018019_1018367_+	DNA-binding protein	NA	H6WRX9	Salmonella_phage	90.4	4.8e-53
AYT94289.1|1018363_1018888_+	bacteriophage protein	NA	A0A220NQV2	Salmonella_phage	99.4	1.8e-91
AYT94290.1|1018887_1019361_+	methyltransferase	NA	H9C170	Pectobacterium_phage	80.1	1.6e-67
AYT94291.1|1019364_1019937_+	bacteriophage protein	NA	S4TSR6	Salmonella_phage	68.0	1.3e-66
AYT94292.1|1020030_1020297_+	bacteriophage protein	NA	S4TNF2	Salmonella_phage	100.0	1.5e-46
AYT94293.1|1020378_1020540_+	bacteriophage protein	NA	NA	NA	NA	NA
AYT94294.1|1020972_1021470_+	bacteriophage protein	NA	NA	NA	NA	NA
AYT94295.1|1021654_1021894_+	damage-inducible protein	NA	H6WRY5	Salmonella_phage	100.0	3.9e-38
AYT94296.1|1021883_1022189_+	bacteriophage protein	NA	H6WRY6	Salmonella_phage	100.0	9.8e-42
AYT94297.1|1022228_1022831_+	bacteriophage protein	NA	S4TTI0	Salmonella_phage	99.5	7.5e-110
AYT94298.1|1023039_1023651_+	bacteriophage lambda protein NinG	NA	A0A0M4RU10	Salmonella_phage	99.5	2.5e-92
AYT94299.1|1023783_1024581_+	prophage antitermination protein	NA	A0A0M4S661	Salmonella_phage	99.2	3.4e-150
AYT94300.1|1024979_1025105_+	bacteriophage protein	NA	NA	NA	NA	NA
AYT94301.1|1025240_1025690_-	lipoprotein	NA	NA	NA	NA	NA
AYT94302.1|1025906_1026296_+	prophage membrane protein	NA	K7PHB9	Enterobacterial_phage	70.2	3.1e-40
AYT94303.1|1026282_1026564_+	prophage membrane protein	NA	K7PKN9	Enterobacterial_phage	80.6	2.6e-36
AYT94304.1|1026563_1027178_+	bacteriophage protein	NA	Q8HA86	Salmonella_phage	93.1	3.2e-108
AYT94305.1|1027397_1027652_+	hypothetical protein	NA	NA	NA	NA	NA
AYT94306.1|1027756_1028134_+	hypothetical protein	NA	Q6UAR9	Klebsiella_phage	68.5	4.9e-43
AYT94307.1|1028197_1028458_+	hypothetical protein	NA	NA	NA	NA	NA
AYT94308.1|1028547_1029300_+|terminase	prophage terminase small subunit	terminase	A0A0M3ULJ9	Salmonella_phage	56.5	3.4e-11
AYT94309.1|1029265_1030669_+	bacteriophage protein	NA	A0A077KAW0	Edwardsiella_phage	70.1	6.5e-189
AYT94310.1|1030668_1032138_+	hypothetical protein	NA	A0A0M4S6U1	Salmonella_phage	99.2	1.7e-280
AYT94311.1|1032229_1032760_+	hypothetical protein	NA	A0A0M4REK0	Salmonella_phage	87.4	8.7e-86
AYT94312.1|1032774_1034007_+	hypothetical protein	NA	A0A0M4R5A6	Salmonella_phage	99.0	1.4e-227
AYT94313.1|1034011_1034509_+	bacteriophage protein	NA	A0A0M4QWZ6	Salmonella_phage	99.4	8.7e-88
AYT94314.1|1034520_1035462_+	bacteriophage protein	NA	A0A0M3ULD3	Salmonella_phage	100.0	3.1e-179
AYT94315.1|1035503_1035872_+	bacteriophage protein	NA	A0A0M4RTX5	Salmonella_phage	100.0	8.7e-61
AYT94316.1|1035837_1036245_+	bacteriophage protein	NA	A0A0M5M3S2	Salmonella_phage	97.8	7.1e-72
AYT94317.1|1036241_1036796_+	bacteriophage protein	NA	A0A0M4S631	Salmonella_phage	100.0	4.8e-95
AYT94318.1|1036782_1037172_+	bacteriophage protein	NA	A0A0M3ULK0	Salmonella_phage	98.4	6.0e-68
AYT94319.1|1037146_1037710_+	bacteriophage protein	NA	A0A0M4R331	Salmonella_phage	75.3	8.9e-81
AYT94320.1|1037713_1038859_+	bacteriophage protein	NA	A0A2H4J8G4	uncultured_Caudovirales_phage	74.5	2.2e-163
AYT94321.1|1038870_1039311_+	bacteriophage protein	NA	A0A2H4J619	uncultured_Caudovirales_phage	74.7	3.5e-56
AYT94322.1|1039314_1039767_+	bacteriophage protein	NA	A0A0M4S6U8	Salmonella_phage	76.6	1.9e-57
AYT94323.1|1039944_1041897_+	bacteriophage protein	NA	A0A0M4REK7	Salmonella_phage	56.0	1.8e-181
AYT94324.1|1041896_1042547_+	bacteriophage protein	NA	A0A0M3ULD5	Salmonella_phage	60.6	3.0e-56
AYT94325.1|1042550_1042853_+	bacteriophage protein	NA	A0A2H4J495	uncultured_Caudovirales_phage	57.0	2.0e-26
AYT94326.1|1042855_1043887_+	bacteriophage protein	NA	A0A2H4J1B2	uncultured_Caudovirales_phage	51.4	1.2e-96
AYT94327.1|1043883_1044219_+	hypothetical protein	NA	A0A2H4J1A5	uncultured_Caudovirales_phage	52.2	1.1e-20
AYT94328.1|1044413_1045145_+	bacteriophage protein	NA	NA	NA	NA	NA
AYT94329.1|1045144_1045573_+	bacteriophage protein	NA	NA	NA	NA	NA
AYT94330.1|1045631_1046387_+	bacteriophage protein	NA	A0A0M5M1K7	Salmonella_phage	85.3	4.1e-105
AYT94331.1|1046474_1046612_+	bacteriophage protein	NA	A0A0M4S639	Salmonella_phage	100.0	2.0e-18
AYT94332.1|1046627_1046981_+	bacteriophage protein	NA	A0A0M4R339	Salmonella_phage	98.3	3.2e-60
AYT94333.1|1046981_1048181_+	bacteriophage protein	NA	A0A0M4RD32	Salmonella_phage	97.5	8.5e-214
AYT94334.1|1048177_1048858_+	bacteriophage protein	NA	A0A0M5M1K4	Salmonella_phage	98.7	6.9e-128
AYT94335.1|1048857_1050369_+|tail	bacteriophage tail protein	tail	S4TP62	Salmonella_phage	59.1	5.9e-111
AYT94336.1|1050383_1050902_+|tail	tail fiber protein	tail	A0A1B0VCD0	Salmonella_phage	62.8	1.7e-46
AYT94337.1|1051823_1052525_-	hypothetical protein	NA	NA	NA	NA	NA
AYT94338.1|1052837_1053116_-	hypothetical protein	NA	S4TNM0	Salmonella_phage	92.3	2.4e-26
AYT94339.1|1053541_1056154_+	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	22.6	1.1e-19
AYT94340.1|1056361_1057372_+	dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
AYT94341.1|1057534_1058080_+	hypothetical protein	NA	NA	NA	NA	NA
AYT94342.1|1058076_1059186_-	MOSC domain-containing protein	NA	NA	NA	NA	NA
AYT94343.1|1059284_1061393_+	23S rRNA m(2)G2445 methyltransferase	NA	W6LLI2	Streptococcus_phage	29.6	5.1e-20
AYT94344.1|1061405_1063313_+	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	29.8	2.4e-53
1061517:1061536	attR	AACGGCGCCGGGAAATCCAC	NA	NA	NA	NA
AYT94345.1|1063327_1064581_+	inner membrane protein	NA	NA	NA	NA	NA
AYT94346.1|1064585_1066226_+	paraquat-inducible protein B	NA	NA	NA	NA	NA
AYT94347.1|1066222_1066786_+	lipoprotein	NA	NA	NA	NA	NA
AYT94348.1|1067039_1067207_+	ribosome modulation factor	NA	NA	NA	NA	NA
AYT94349.1|1067306_1067825_-	D-3-hydroxydecanoyl-(acyl carrier-protein) dehydratase	NA	NA	NA	NA	NA
AYT94350.1|1067893_1069654_-|protease	ATP-dependent protease	protease	NA	NA	NA	NA
AYT94351.1|1069839_1070292_+	Ter macrodomain organizer matS-binding protein	NA	NA	NA	NA	NA
AYT94352.1|1070363_1071416_-	outer membrane protein A	NA	NA	NA	NA	NA
AYT94353.1|1071770_1072280_-	cell division inhibitor	NA	NA	NA	NA	NA
AYT94354.1|1072496_1073102_+	competence-specific transcriptional regulator TfoX	NA	NA	NA	NA	NA
AYT94355.1|1073088_1075242_-	inner membrane protein	NA	NA	NA	NA	NA
AYT94356.1|1075260_1075707_-	hypothetical protein	NA	NA	NA	NA	NA
AYT94357.1|1075830_1077885_+	helicase IV	NA	A7KV33	Bacillus_phage	27.6	6.5e-20
AYT94358.1|1077920_1078379_-	methylglyoxal synthase	NA	NA	NA	NA	NA
AYT94359.1|1078473_1079136_-	hypothetical protein	NA	NA	NA	NA	NA
AYT94360.1|1079306_1079723_+	hypothetical protein	NA	NA	NA	NA	NA
AYT94361.1|1079767_1080085_-	heat shock protein HspQ	NA	NA	NA	NA	NA
AYT94362.1|1080142_1081354_-	23S rRNA m(5)C1962 methyltransferase	NA	NA	NA	NA	NA
AYT94363.1|1082485_1082944_+|transposase	insertion sequence element IS200 transposase	transposase	NA	NA	NA	NA
AYT94364.1|1083680_1083962_+	acylphosphatase	NA	NA	NA	NA	NA
AYT94365.1|1083958_1084288_-	sulfite reductase	NA	NA	NA	NA	NA
AYT94366.1|1084374_1085034_-	hypothetical protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	52.4	2.7e-44
AYT94367.1|1085697_1086156_+|transposase	insertion sequence element IS200 transposase	transposase	NA	NA	NA	NA
>prophage 3
CP029906	Salmonella enterica subsp. enterica serovar Typhi strain 343077_267164 chromosome, complete genome	4775386	1531266	1605260	4775386	protease,head,tail,plate,transposase,tRNA	Burkholderia_virus(43.24%)	80	NA	NA
AYT94767.1|1531266_1531725_-|transposase	insertion sequence element IS200 transposase	transposase	NA	NA	NA	NA
AYT94768.1|1532227_1532509_+	stress response protein	NA	NA	NA	NA	NA
AYT94769.1|1532777_1533599_+|protease	serine protease	protease	NA	NA	NA	NA
AYT94770.1|1533633_1533963_-	multidrug efflux system protein MdtI	NA	NA	NA	NA	NA
AYT94771.1|1533949_1534312_-	multidrug efflux system protein MdtJ	NA	NA	NA	NA	NA
AYT94772.1|1534423_1534594_-	hypothetical protein	NA	NA	NA	NA	NA
AYT94773.1|1534728_1535763_+	hypothetical protein	NA	NA	NA	NA	NA
AYT94774.1|1535937_1537326_-	pyridine nucleotide transhydrogenase subunit beta	NA	NA	NA	NA	NA
AYT94775.1|1537336_1538866_-	pyridine nucleotide transhydrogenase subunit alpha	NA	NA	NA	NA	NA
AYT94776.1|1539392_1540337_+	hypothetical protein	NA	NA	NA	NA	NA
AYT94777.1|1540518_1540908_-	bacteriophage transcriptional regulator	NA	Q6QIE8	Burkholderia_phage	54.2	4.5e-31
AYT94778.1|1540879_1541332_-	hypothetical protein	NA	A4JWM5	Burkholderia_virus	46.6	1.2e-24
AYT94779.1|1541526_1541757_-	hypothetical protein	NA	NA	NA	NA	NA
AYT94780.1|1541753_1542437_-	hypothetical protein	NA	A0A2P9JZH4	Alteromonadaceae_phage	37.3	2.6e-34
AYT94781.1|1542433_1542649_-	hypothetical protein	NA	NA	NA	NA	NA
AYT94782.1|1542641_1543025_-	hypothetical protein	NA	K7PJQ4	Enterobacteria_phage	58.9	2.3e-27
AYT94783.1|1543021_1543324_-	hypothetical protein	NA	NA	NA	NA	NA
AYT94784.1|1543333_1543606_-	hypothetical protein	NA	NA	NA	NA	NA
AYT94785.1|1543894_1544425_-	bacteriophage host-nuclease inhibitor protein	NA	L7P7T1	Pseudomonas_phage	66.1	3.4e-58
AYT94786.1|1544452_1544722_-	hypothetical protein	NA	NA	NA	NA	NA
AYT94787.1|1544724_1545891_-	ExeA protein	NA	A4JWN1	Burkholderia_virus	59.7	3.3e-122
AYT94788.1|1545901_1547671_-	hypothetical protein	NA	Q6QIE0	Burkholderia_phage	68.5	2.8e-229
AYT94789.1|1547848_1548280_-	hypothetical protein	NA	A4JWN3	Burkholderia_virus	57.3	4.5e-32
AYT94790.1|1548275_1549268_+	nucleoid-associated protein	NA	A0A291AUQ0	Sinorhizobium_phage	37.3	3.0e-55
AYT94791.1|1549511_1549862_+	hypothetical protein	NA	A4JWP3	Burkholderia_virus	53.0	4.5e-22
AYT94792.1|1550576_1551227_+	lipoprotein	NA	Q5ZQY9	Pseudomonas_phage	32.9	8.1e-09
AYT94793.1|1551223_1551550_+	hypothetical protein	NA	Q6QIC4	Burkholderia_phage	49.5	9.6e-19
AYT94794.1|1551549_1551861_+	hypothetical protein	NA	A0A0S4L0A3	Pseudomonas_phage	62.6	9.4e-32
AYT94795.1|1551860_1552406_+	hypothetical protein	NA	A4JWJ3	Burkholderia_virus	67.6	9.3e-59
AYT94796.1|1552402_1553998_+	hypothetical protein	NA	A4JWJ4	Burkholderia_virus	62.6	9.3e-184
AYT94797.1|1553997_1555494_+	hypothetical protein	NA	A4JWJ5	Burkholderia_virus	59.6	8.0e-169
AYT94798.1|1555474_1556296_+|head	phage head morphogenesis protein	head	A4JWJ6	Burkholderia_virus	61.2	5.3e-98
AYT94799.1|1556298_1556757_+	bacteriophage protein	NA	Q6QIB8	Burkholderia_phage	44.8	1.5e-30
AYT94800.1|1556971_1558087_+	hypothetical protein	NA	A4JWJ9	Burkholderia_virus	51.1	7.9e-97
AYT94801.1|1558101_1559055_+	hypothetical protein	NA	A4JWK0	Burkholderia_virus	44.5	5.2e-65
AYT94802.1|1559064_1559403_+	hypothetical protein	NA	NA	NA	NA	NA
AYT94803.1|1559404_1559851_+	hypothetical protein	NA	A4JWK2	Burkholderia_virus	52.3	2.2e-34
AYT94804.1|1559850_1560315_+	hypothetical protein	NA	Q6QIB2	Burkholderia_phage	51.7	9.1e-39
AYT94805.1|1560311_1560566_+	hypothetical protein	NA	NA	NA	NA	NA
AYT94806.1|1560555_1561983_+|tail	bacteriophage tail sheath protein	tail	A4JWK5	Burkholderia_virus	77.4	3.7e-216
AYT94807.1|1561982_1562504_+|tail	tail core protein	tail	A4JWK6	Burkholderia_virus	68.2	8.0e-68
AYT94808.1|1562506_1562788_+	hypothetical protein	NA	NA	NA	NA	NA
AYT94809.1|1562885_1563221_+	hypothetical protein	NA	NA	NA	NA	NA
AYT94810.1|1563397_1565863_+	bacteriophage protein	NA	A4JWL0	Burkholderia_virus	42.6	2.2e-168
AYT94811.1|1565862_1566747_+	hypothetical protein	NA	A4JWL1	Burkholderia_virus	47.0	7.5e-50
AYT94812.1|1566743_1566959_+|tail	bacteriophage tail fiber protein	tail	Q6QIA3	Burkholderia_phage	60.0	2.4e-18
AYT94813.1|1566946_1568101_+	bacteriophage regulatory protein	NA	Q6QIA2	Burkholderia_phage	47.1	4.7e-84
AYT94814.1|1568097_1568625_+|plate	bacteriophage baseplate protein	plate	Q6QIA1	Burkholderia_phage	46.5	1.5e-21
AYT94815.1|1568681_1569029_+|plate	bacteriophage baseplate protein	plate	Q6QIA0	Burkholderia_phage	60.6	8.6e-34
AYT94816.1|1569019_1570123_+|plate	bacteriophage baseplate assembly protein	plate	Q6QI99	Burkholderia_phage	54.3	5.4e-106
AYT94817.1|1570115_1570694_+|tail	bacteriophage tail fiber protein	tail	A4JWL7	Burkholderia_virus	65.8	6.4e-66
AYT94818.1|1571511_1571721_+|tail	phage tail protein	tail	NA	NA	NA	NA
AYT94819.1|1572234_1572852_+|tail	bacteriophage tail fiber assembly protein	tail	Q9MCR5	Enterobacteria_phage	59.9	5.8e-65
AYT94820.1|1574362_1574935_+	DNA-invertase	NA	A0A0A7NPV4	Enterobacteria_phage	84.7	8.8e-84
AYT94821.1|1575215_1576598_+	amino acid permease	NA	NA	NA	NA	NA
AYT94822.1|1576659_1576995_-	hypothetical protein	NA	NA	NA	NA	NA
AYT94823.1|1577121_1577853_+	two-component response regulator	NA	NA	NA	NA	NA
AYT94824.1|1578333_1579485_+	outer membrane protein	NA	Q1MVN1	Enterobacteria_phage	59.1	3.2e-117
AYT94825.1|1579637_1581344_+	metal-dependent hydrolase	NA	NA	NA	NA	NA
AYT94826.1|1581451_1582756_+	two component sensor kinase	NA	W8CYF6	Bacillus_phage	22.7	5.7e-14
AYT94827.1|1582831_1583761_+	DNA sequence-specific contrahelicase	NA	NA	NA	NA	NA
AYT94828.1|1583757_1585161_-	fumarate hydratase class II	NA	NA	NA	NA	NA
AYT94829.1|1585328_1586975_-	Fumarate hydratase class I	NA	NA	NA	NA	NA
AYT94830.1|1587174_1588350_+	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
AYT94831.1|1588452_1589961_+	hypothetical protein	NA	NA	NA	NA	NA
AYT94832.1|1590666_1591668_+	adenosine deaminase	NA	NA	NA	NA	NA
AYT94833.1|1591741_1592857_-	oxidoreductase	NA	NA	NA	NA	NA
AYT94834.1|1592959_1593115_+	hypothetical protein	NA	NA	NA	NA	NA
AYT94835.1|1593413_1593629_+	oriC-binding nucleoid-associated protein	NA	NA	NA	NA	NA
AYT94836.1|1593717_1594158_+	hypothetical protein	NA	NA	NA	NA	NA
AYT94837.1|1594234_1594816_+	Na(+)-translocating NADH-quinone reductase subunit E	NA	NA	NA	NA	NA
AYT94838.1|1594815_1595394_+	ferredoxin-like protein	NA	NA	NA	NA	NA
AYT94839.1|1595386_1597408_+	NADH reducing dehydrogenase	NA	NA	NA	NA	NA
AYT94840.1|1597408_1598467_+	electron transport complex protein RnfD	NA	NA	NA	NA	NA
AYT94841.1|1598470_1599091_+	electron transport complex protein RnfG	NA	NA	NA	NA	NA
AYT94842.1|1599093_1599786_+	electron transport complex protein RsxE	NA	NA	NA	NA	NA
AYT94843.1|1599785_1600421_+	endonuclease III	NA	NA	NA	NA	NA
AYT94844.1|1601021_1602527_+	proton/oligopeptide symporter	NA	NA	NA	NA	NA
AYT94845.1|1602631_1603237_+	glutathione S-transferase	NA	NA	NA	NA	NA
AYT94846.1|1603985_1605260_-|tRNA	tyrosyl-tRNA synthetase	tRNA	K4F5T3	Cronobacter_phage	42.1	1.6e-85
>prophage 4
CP029906	Salmonella enterica subsp. enterica serovar Typhi strain 343077_267164 chromosome, complete genome	4775386	1786305	1790717	4775386		Escherichia_phage(50.0%)	6	NA	NA
AYT95030.1|1786305_1786545_+	virulence protein	NA	K7P6H1	Enterobacteria_phage	88.6	8.5e-33
AYT95031.1|1787417_1788227_+	toxin-like protein	NA	A5LH53	Enterobacteria_phage	50.0	2.1e-62
AYT95032.1|1788299_1788677_+	hypothetical protein	NA	I1TQ41	Pseudomonas_phage	38.4	2.2e-14
AYT95033.1|1788824_1789367_-	hypothetical protein	NA	A0A0U2S643	Escherichia_phage	67.0	6.2e-71
AYT95034.1|1789558_1790287_-	pertussis toxin subunit ArtA	NA	A0A0U2KD26	Escherichia_phage	53.3	4.9e-63
AYT95035.1|1790303_1790717_-	pertussis-like toxin subunit	NA	A0A0U2KD34	Escherichia_phage	38.6	1.4e-19
>prophage 5
CP029906	Salmonella enterica subsp. enterica serovar Typhi strain 343077_267164 chromosome, complete genome	4775386	2086255	2096762	4775386		Enterobacteria_phage(37.5%)	10	NA	NA
AYT95308.1|2086255_2087569_-	dehydratase RfbH	NA	H8ZJ36	Ostreococcus_tauri_virus	35.1	7.0e-52
AYT95309.1|2087595_2088675_-	CDP-glucose 4,6-dehydratase	NA	A0A222YY99	Synechococcus_phage	24.1	1.3e-16
AYT95310.1|2088679_2089453_-	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
AYT95311.1|2089468_2090443_-	reductase RfbI	NA	NA	NA	NA	NA
AYT95312.1|2090448_2091000_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	58.6	7.7e-53
AYT95313.1|2091000_2091879_-	TDP-glucose pyrophosphorylase	NA	I7I009	Enterobacteria_phage	64.8	2.3e-107
AYT95314.1|2091926_2092826_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	36.3	7.9e-31
AYT95315.1|2092825_2093911_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	53.9	1.6e-102
AYT95316.1|2094287_2095181_-	UTP-glucose-1-phosphate uridylyltransferase	NA	A0A127AW70	Bacillus_phage	42.2	4.8e-44
AYT95317.1|2095358_2096762_-	colanic acid biosynthesis protein WcaM	NA	A0A291LBB9	Klebsiella_phage	26.5	1.1e-21
>prophage 6
CP029906	Salmonella enterica subsp. enterica serovar Typhi strain 343077_267164 chromosome, complete genome	4775386	2172655	2181823	4775386	tRNA	Enterobacteria_phage(66.67%)	10	NA	NA
AYT95380.1|2172655_2174689_+|tRNA	methionyl-tRNA synthetase	tRNA	A0A1V0SDF2	Indivirus	26.9	6.1e-55
AYT95381.1|2174929_2175388_+	lipoprotein	NA	Q9EYF5	Enterobacteria_phage	72.5	8.4e-53
AYT95382.1|2175559_2176090_+	lipoprotein	NA	NA	NA	NA	NA
AYT95383.1|2176146_2176614_-	hypothetical protein	NA	Q9EYF4	Enterobacteria_phage	90.3	3.9e-74
AYT95384.1|2176660_2177380_-	two-component system response regulator	NA	NA	NA	NA	NA
AYT95385.1|2177376_2179059_-	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	89.7	4.3e-272
AYT95386.1|2179281_2180013_+	transcriptional regulator	NA	Q9EYF2	Enterobacteria_phage	87.9	4.5e-101
AYT95387.1|2180072_2180180_+	hypothetical protein	NA	NA	NA	NA	NA
AYT95388.1|2180160_2180892_-	ABC transporter permease	NA	NA	NA	NA	NA
AYT95389.1|2180875_2181823_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.2	1.7e-23
>prophage 7
CP029906	Salmonella enterica subsp. enterica serovar Typhi strain 343077_267164 chromosome, complete genome	4775386	2717363	2730755	4775386	tail	Salmonella_phage(70.0%)	11	NA	NA
AYT95818.1|2717363_2717582_-	hypothetical protein	NA	Q53ZE7	Salmonella_virus	71.9	1.9e-18
AYT95819.1|2717672_2718773_-	hypothetical protein	NA	A0A1S6KZZ5	Salmonella_phage	88.3	1.0e-176
AYT95820.1|2718769_2719255_-|tail	bacteriophage tail protein	tail	E5G6Q2	Salmonella_phage	80.0	2.4e-66
AYT95821.1|2719251_2722329_-|tail	bacteriophage tail protein	tail	E5G6Q1	Salmonella_phage	63.1	0.0e+00
AYT95822.1|2722321_2722441_-	bacteriophage protein	NA	E5G6Q0	Salmonella_phage	87.2	2.8e-13
AYT95823.1|2722455_2722758_-|tail	phage tail protein	tail	A0A1S6KZZ9	Salmonella_phage	89.0	7.0e-40
AYT95824.1|2722812_2723328_-|tail	major tail tube protein	tail	A0A1S6L002	Salmonella_phage	95.9	5.6e-90
AYT95825.1|2723337_2724510_-|tail	bacteriophage major tail sheath protein	tail	A0A1S6KZY7	Salmonella_phage	90.3	3.5e-204
AYT95826.1|2724652_2725225_-	DNA-invertase	NA	A0A0F7LA37	Escherichia_phage	86.3	1.4e-86
AYT95827.1|2725902_2727018_+	glycosyltransferase	NA	NA	NA	NA	NA
AYT95828.1|2727098_2730755_+	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	28.6	1.0e-44
>prophage 8
CP029906	Salmonella enterica subsp. enterica serovar Typhi strain 343077_267164 chromosome, complete genome	4775386	3062151	3105854	4775386	protease,bacteriocin,transposase,tRNA	Bacillus_virus(33.33%)	44	NA	NA
AYT96133.1|3062151_3062610_-|transposase	insertion sequence element IS200 transposase	transposase	NA	NA	NA	NA
AYT96134.1|3062799_3063879_-	fructose 1,6-bisphosphate aldolase	NA	NA	NA	NA	NA
AYT96135.1|3063980_3065144_-	phosphoglycerate kinase	NA	NA	NA	NA	NA
AYT96136.1|3065165_3066212_-	D-erythrose 4-phosphate dehydrogenase	NA	NA	NA	NA	NA
AYT96137.1|3066585_3067011_+	hypothetical protein	NA	NA	NA	NA	NA
AYT96138.1|3067036_3067615_+	hypothetical protein	NA	NA	NA	NA	NA
AYT96139.1|3067648_3068323_+	hypothetical protein	NA	NA	NA	NA	NA
AYT96140.1|3068304_3068988_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
AYT96141.1|3068981_3069638_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	28.6	1.6e-09
AYT96142.1|3069742_3070201_-|transposase	insertion sequence element IS200 transposase	transposase	NA	NA	NA	NA
AYT96143.1|3070389_3072381_-	transketolase	NA	NA	NA	NA	NA
AYT96144.1|3072656_3073415_+|protease	metalloprotease	protease	NA	NA	NA	NA
AYT96145.1|3073515_3074436_-	agmatine ureohydrolase	NA	NA	NA	NA	NA
AYT96146.1|3074663_3076640_-	biosynthetic arginine decarboxylase	NA	NA	NA	NA	NA
AYT96147.1|3076648_3076780_-	hypothetical protein	NA	NA	NA	NA	NA
AYT96148.1|3077074_3077374_-	membrane protein	NA	NA	NA	NA	NA
AYT96149.1|3077429_3078584_+	S-adenosylmethionine synthetase	NA	A0A2H4PQS6	Staphylococcus_phage	63.9	1.5e-130
AYT96150.1|3079076_3080471_+	galactose-proton symport	NA	NA	NA	NA	NA
AYT96151.1|3080549_3081047_+	hypothetical protein	NA	NA	NA	NA	NA
AYT96152.1|3081142_3081850_+	endonuclease I	NA	NA	NA	NA	NA
AYT96153.1|3081926_3082658_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
AYT96154.1|3082677_3083625_+	glutathione synthetase	NA	NA	NA	NA	NA
AYT96155.1|3083840_3084404_+	hypothetical protein	NA	NA	NA	NA	NA
AYT96156.1|3084403_3084820_+	Holliday junction resolvase	NA	NA	NA	NA	NA
AYT96157.1|3084866_3085553_-	global regulatory protein	NA	NA	NA	NA	NA
AYT96158.1|3085682_3086663_-	type II secretion system ATP-binding protein	NA	NA	NA	NA	NA
AYT96159.1|3086680_3087385_+	hypothetical protein	NA	NA	NA	NA	NA
AYT96160.1|3087403_3087970_+	hypothetical protein	NA	NA	NA	NA	NA
AYT96161.1|3087966_3088257_+	hypothetical protein	NA	NA	NA	NA	NA
AYT96162.1|3088264_3088858_+	dITP/XTP pyrophosphatase	NA	NA	NA	NA	NA
AYT96163.1|3088850_3089987_+	oxygen-independent coproporphyrinogen III oxidase	NA	NA	NA	NA	NA
AYT96164.1|3090077_3091085_-	hypothetical protein	NA	NA	NA	NA	NA
AYT96165.1|3091217_3092264_-	L-asparaginase	NA	NA	NA	NA	NA
AYT96166.1|3092582_3093041_+|transposase	insertion sequence element IS200 transposase	transposase	NA	NA	NA	NA
AYT96167.1|3093163_3093883_-	hypothetical protein	NA	NA	NA	NA	NA
AYT96168.1|3093932_3094259_-	hypothetical protein	NA	NA	NA	NA	NA
AYT96169.1|3094258_3094978_-|tRNA	tRNA m(7)G46 methyltransferase	tRNA	NA	NA	NA	NA
AYT96170.1|3095132_3096185_+	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
AYT96171.1|3096212_3096488_+	oxidative damage protection protein	NA	NA	NA	NA	NA
AYT96172.1|3096600_3097686_+	membrane-bound lytic murein transglycosylase C	NA	A0A0H3V0Q1	Geobacillus_virus	39.0	5.8e-12
AYT96173.1|3097902_3099159_+	nucleoside permease	NA	NA	NA	NA	NA
AYT96174.1|3101769_3102477_+	hypothetical protein	NA	NA	NA	NA	NA
AYT96175.1|3105066_3105333_+|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
AYT96176.1|3105575_3105854_+|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
>prophage 9
CP029906	Salmonella enterica subsp. enterica serovar Typhi strain 343077_267164 chromosome, complete genome	4775386	3480970	3519028	4775386	tail,plate,integrase,portal,transposase,capsid,terminase	Salmonella_phage(82.05%)	46	3475934:3475948	3488100:3488114
3475934:3475948	attL	CGAATTTCTTTTTCA	NA	NA	NA	NA
AYT96504.1|3480970_3482617_-	acetolactate synthase large subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	31.5	9.0e-65
AYT96505.1|3482756_3482855_-	ilvGMEDA operon attenuator peptide	NA	NA	NA	NA	NA
AYT96506.1|3483110_3483440_+	hypothetical protein	NA	NA	NA	NA	NA
AYT96507.1|3483480_3484533_-|integrase	bacteriophage integrase	integrase	A0A218M4I3	Erwinia_phage	57.3	3.6e-107
AYT96508.1|3484928_3485498_-	repressor protein	NA	A0A1S6KZZ7	Salmonella_phage	43.4	2.5e-38
AYT96509.1|3485623_3485845_+	hypothetical protein	NA	NA	NA	NA	NA
AYT96510.1|3485877_3486387_+	regulatory protein cII	NA	E5G6L3	Salmonella_phage	98.8	5.8e-87
AYT96511.1|3486561_3486786_+	hypothetical protein	NA	NA	NA	NA	NA
AYT96512.1|3486808_3487150_+	hypothetical protein	NA	E5G6L5	Salmonella_phage	98.2	1.7e-55
AYT96513.1|3487217_3487451_+	hypothetical protein	NA	E5G6L6	Salmonella_phage	94.8	2.0e-31
AYT96514.1|3487450_3487678_+	hypothetical protein	NA	E5G6L7	Salmonella_phage	100.0	2.7e-36
AYT96515.1|3487674_3488532_+	DNA adenine methylase	NA	E5G6L8	Salmonella_phage	97.2	3.5e-161
3488100:3488114	attR	TGAAAAAGAAATTCG	NA	NA	NA	NA
AYT96516.1|3488528_3490943_+	endonuclease	NA	E5G6L9	Salmonella_phage	97.5	0.0e+00
AYT96517.1|3491096_3491285_+	hypothetical protein	NA	E5G6M0	Salmonella_phage	95.2	7.9e-26
AYT96518.1|3493252_3494167_+	hypothetical protein	NA	NA	NA	NA	NA
AYT96519.1|3494163_3494904_+	hypothetical protein	NA	NA	NA	NA	NA
AYT96520.1|3494938_3495976_-|capsid,portal	capsid portal protein	capsid,portal	A0A1S6KZW5	Salmonella_phage	89.5	1.3e-173
AYT96521.1|3495975_3497742_-|terminase	terminase subunit	terminase	A0A1S6KZW3	Salmonella_phage	99.5	0.0e+00
AYT96522.1|3497884_3498718_+|capsid	capsid scaffolding protein	capsid	A0A1S6KZW9	Salmonella_phage	90.6	1.5e-121
AYT96523.1|3498734_3499793_+|capsid	major capsid protein	capsid	E5G6M6	Salmonella_phage	93.1	1.4e-180
AYT96524.1|3499796_3500447_+|terminase	terminase endonuclease subunit	terminase	E5G6M7	Salmonella_phage	96.3	8.7e-112
AYT96525.1|3500479_3501007_+|capsid	capsid completion protein	capsid	A0A1S6KZW8	Salmonella_phage	89.0	2.1e-76
AYT96526.1|3501006_3501210_+|tail	phage tail protein	tail	E5G6M9	Salmonella_phage	92.5	1.4e-31
AYT96527.1|3501213_3501429_+	hypothetical protein	NA	E5G6N0	Salmonella_phage	80.3	1.8e-26
AYT96528.1|3501448_3501922_+	lysozyme	NA	E5G6N1	Salmonella_phage	91.0	3.7e-80
AYT96529.1|3501923_3502301_+	hypothetical protein	NA	A0A1S6KZZ2	Salmonella_phage	40.0	2.3e-16
AYT96530.1|3502297_3502726_+	regulatory protein	NA	E5G6N2	Salmonella_phage	77.3	2.2e-47
AYT96531.1|3502821_3503253_+|tail	phage tail protein	tail	E5G6N3	Salmonella_phage	95.1	1.5e-72
AYT96532.1|3503245_3503692_+|tail	phage tail protein	tail	A0A1S6L001	Salmonella_phage	85.6	6.6e-63
AYT96533.1|3503760_3504339_+|plate	phage baseplate assembly protein	plate	A0A1S6KZX7	Salmonella_phage	86.5	5.5e-94
AYT96534.1|3504335_3504695_+|plate	phage baseplate assembly protein	plate	A0A1S6KZZ4	Salmonella_phage	84.9	6.1e-51
AYT96535.1|3504681_3505590_+|plate	phage baseplate assembly protein	plate	A0A1S6KZY6	Salmonella_phage	89.7	1.3e-142
AYT96536.1|3505582_3506188_+|tail	phage tail protein	tail	A0A1S6L000	Salmonella_phage	92.0	2.0e-110
AYT96537.1|3506184_3507699_+|tail	variable tail fiber protein	tail	M1TAS6	Escherichia_phage	73.2	6.8e-200
AYT96538.1|3507698_3508292_+|tail	tail fiber assembly protein	tail	M1SV83	Escherichia_phage	64.3	9.2e-60
AYT96539.1|3508263_3508704_-|tail	tail fiber assembly protein	tail	A0A0F7LDZ0	Escherichia_phage	68.0	3.1e-52
AYT96540.1|3509126_3509699_+	DNA-invertase	NA	A0A0F7LA37	Escherichia_phage	86.3	1.4e-86
AYT96541.1|3509841_3511014_+|tail	bacteriophage major tail sheath protein	tail	A0A1S6KZY7	Salmonella_phage	90.3	3.5e-204
AYT96542.1|3511023_3511539_+|tail	major tail tube protein	tail	A0A1S6L002	Salmonella_phage	95.9	5.6e-90
AYT96543.1|3511593_3511896_+|tail	phage tail protein	tail	A0A1S6KZZ9	Salmonella_phage	89.0	7.0e-40
AYT96544.1|3511910_3512030_+	hypothetical protein	NA	E5G6Q0	Salmonella_phage	87.2	2.8e-13
AYT96545.1|3512022_3515100_+|tail	bacteriophage tail protein	tail	E5G6Q1	Salmonella_phage	63.1	0.0e+00
AYT96546.1|3515096_3515582_+|tail	bacteriophage tail protein	tail	E5G6Q2	Salmonella_phage	80.0	2.4e-66
AYT96547.1|3515578_3516679_+	hypothetical protein	NA	A0A1S6KZZ5	Salmonella_phage	88.3	1.0e-176
AYT96548.1|3516769_3516988_+	hypothetical protein	NA	Q53ZE7	Salmonella_virus	69.0	7.5e-20
AYT96549.1|3518569_3519028_+|transposase	insertion sequence element IS200 transposase	transposase	NA	NA	NA	NA
>prophage 10
CP029906	Salmonella enterica subsp. enterica serovar Typhi strain 343077_267164 chromosome, complete genome	4775386	4434248	4508518	4775386	tail,plate,integrase,portal,capsid,terminase	Salmonella_phage(82.61%)	75	4495762:4495778	4508677:4508693
AYT97326.1|4434248_4436198_+	hypothetical protein	NA	A0A2K9V411	Faecalibacterium_phage	38.3	5.9e-31
AYT97327.1|4436269_4437178_+	hypothetical protein	NA	NA	NA	NA	NA
AYT97328.1|4437251_4438151_+	hypothetical protein	NA	NA	NA	NA	NA
AYT97329.1|4438192_4438552_+	hypothetical protein	NA	NA	NA	NA	NA
AYT97330.1|4438651_4438921_-	hypothetical protein	NA	NA	NA	NA	NA
AYT97331.1|4439052_4440327_-	UV protection protein	NA	F1C5A5	Cronobacter_phage	62.0	7.5e-152
AYT97332.1|4440546_4440924_+	hypothetical protein	NA	NA	NA	NA	NA
AYT97333.1|4441010_4441229_-	hypothetical protein	NA	E5G6Q4	Salmonella_phage	75.0	4.9e-27
AYT97334.1|4441296_4442397_-	hypothetical protein	NA	E5G6Q3	Salmonella_phage	92.1	7.9e-190
AYT97335.1|4442393_4442879_-|tail	phage tail protein	tail	E5G6Q2	Salmonella_phage	93.2	9.4e-71
AYT97336.1|4442878_4445659_-	hypothetical protein	NA	A0A2H4JGB2	uncultured_Caudovirales_phage	41.1	3.5e-125
AYT97337.1|4445651_4445771_-	bacteriophage protein	NA	E5G6Q0	Salmonella_phage	94.9	1.2e-14
AYT97338.1|4445785_4446088_-|tail	phage tail protein	tail	E5G6P9	Salmonella_phage	93.9	3.3e-42
AYT97339.1|4446142_4446658_-|tail	major tail tube protein	tail	E5G6P8	Salmonella_phage	99.4	2.7e-92
AYT97340.1|4446667_4447840_-|tail	major tail sheath protein	tail	A0A1S6KZY7	Salmonella_phage	99.5	9.8e-223
AYT97341.1|4448374_4449097_+	invasion-associated secreted protein	NA	NA	NA	NA	NA
AYT97342.1|4449294_4449702_-|tail	phage tail fiber protein	tail	A0A1B0V844	Salmonella_phage	84.2	4.1e-59
AYT97343.1|4449708_4451328_-|tail	phage tail fiber protein	tail	E5G6P0	Salmonella_phage	90.9	2.7e-154
AYT97344.1|4451324_4451930_-|tail	phage tail protein	tail	A0A1S6L000	Salmonella_phage	92.0	2.0e-110
AYT97345.1|4451922_4452831_-|plate	phage baseplate assembly protein	plate	E5G6N8	Salmonella_phage	97.0	5.2e-155
AYT97346.1|4452817_4453177_-|plate	phage baseplate assembly protein	plate	A0A1S6KZZ4	Salmonella_phage	96.6	6.8e-58
AYT97347.1|4453173_4453752_-|plate	phage baseplate assembly protein	plate	E5G6N6	Salmonella_phage	99.5	3.9e-108
AYT97348.1|4453820_4454267_-|tail	phage tail protein	tail	A0A1S6L001	Salmonella_phage	90.4	2.2e-66
AYT97349.1|4454259_4454691_-|tail	phage tail protein	tail	A0A1S6KZY0	Salmonella_phage	99.3	1.1e-75
AYT97350.1|4454786_4455212_-	regulatory protein	NA	A0A1S6KZX8	Salmonella_phage	97.9	2.5e-67
AYT97351.1|4455211_4455589_-	hypothetical protein	NA	A0A1S6KZZ2	Salmonella_phage	99.2	1.5e-60
AYT97352.1|4455593_4456064_-	lysozyme	NA	A0A1S6KZY9	Salmonella_phage	97.4	1.0e-85
AYT97353.1|4456083_4456299_-	hypothetical protein	NA	E5G6N0	Salmonella_phage	98.6	3.8e-32
AYT97354.1|4456302_4456506_-|tail	phage tail protein	tail	E5G6M9	Salmonella_phage	100.0	3.8e-34
AYT97355.1|4456505_4456970_-|capsid	capsid completion protein	capsid	A0A1S6KZW8	Salmonella_phage	98.1	2.4e-84
AYT97356.1|4457063_4457714_-|terminase	phage terminase	terminase	E5G6M7	Salmonella_phage	99.5	2.4e-114
AYT97357.1|4457717_4458782_-|capsid	major capsid protein	capsid	A0A1S6KZZ3	Salmonella_phage	98.3	1.3e-194
AYT97358.1|4458798_4459632_-|capsid	capsid scaffolding protein	capsid	E5G6M5	Salmonella_phage	87.4	6.1e-126
AYT97359.1|4459774_4461541_+|terminase	terminase subunit	terminase	A0A1S6KZW3	Salmonella_phage	96.4	0.0e+00
AYT97360.1|4461537_4462584_+|capsid,portal	capsid portal protein	capsid,portal	A0A1S6KZW5	Salmonella_phage	86.6	2.1e-176
AYT97361.1|4462632_4463328_-	hypothetical protein	NA	NA	NA	NA	NA
AYT97362.1|4463347_4464412_-	hypothetical protein	NA	NA	NA	NA	NA
AYT97363.1|4464408_4465473_-	hypothetical protein	NA	NA	NA	NA	NA
AYT97364.1|4466397_4468806_-	replication endonuclease	NA	A0A1S6L028	Salmonella_phage	95.1	0.0e+00
AYT97365.1|4468796_4469657_-	DNA adenine methylase	NA	E5G6L8	Salmonella_phage	81.8	3.4e-132
AYT97366.1|4469653_4470238_-	exonuclease	NA	A0A1S6L012	Salmonella_phage	73.7	1.1e-76
AYT97367.1|4470234_4470462_-	hypothetical protein	NA	A0A1S6L007	Salmonella_phage	94.7	1.0e-35
AYT97368.1|4470461_4470695_-	hypothetical protein	NA	A0A1S6L021	Salmonella_phage	84.4	9.8e-26
AYT97369.1|4470762_4471104_-	hypothetical protein	NA	A0A1S6L019	Salmonella_phage	99.1	4.6e-56
AYT97370.1|4471067_4471268_-	hypothetical protein	NA	A0A1S6L005	Salmonella_phage	97.0	4.6e-32
AYT97371.1|4471275_4471785_-	phage regulatory protein	NA	A0A1S6L008	Salmonella_phage	94.1	1.3e-83
AYT97372.1|4471817_4472060_-	phage regulatory protein	NA	A0A1S6KZZ6	Salmonella_phage	98.8	2.3e-38
AYT97373.1|4472176_4472809_+	phage repressor protein cI	NA	A0A1S6KZZ7	Salmonella_phage	58.6	1.4e-66
AYT97374.1|4472812_4473838_+|integrase	phage integrase	integrase	A0A1S6L016	Salmonella_phage	98.2	2.7e-200
AYT97375.1|4473944_4474298_-	protein samA'	NA	I6S1S3	Salmonella_phage	59.3	6.7e-10
AYT97376.1|4474914_4475202_+	hypothetical protein	NA	NA	NA	NA	NA
AYT97377.1|4475212_4476103_+	methyltransferase	NA	NA	NA	NA	NA
AYT97378.1|4476102_4476849_+	hypothetical protein	NA	NA	NA	NA	NA
AYT97379.1|4477150_4479121_-	Vi polysaccharide exporter protein	NA	NA	NA	NA	NA
AYT97380.1|4479140_4480445_-	Vi polysaccharide exporter inner-membrane protein	NA	NA	NA	NA	NA
AYT97381.1|4480467_4481163_-	Vi polysaccharide exporter ATP-binding protein	NA	NA	NA	NA	NA
AYT97382.1|4481188_4481983_-	Vi polysaccharide exporter inner-membrane protein	NA	NA	NA	NA	NA
AYT97383.1|4481992_4483060_-	Vi polysaccharide exporter protein	NA	NA	NA	NA	NA
AYT97384.1|4483104_4484841_-	Vi polysaccharide biosynthesis protein TviE	NA	NA	NA	NA	NA
AYT97385.1|4484840_4487336_-	Vi polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
AYT97386.1|4487359_4488406_-	Vi polysaccharide biosynthesis epimerase	NA	A0A2K9L0I7	Tupanvirus	45.0	1.4e-74
AYT97387.1|4488408_4489686_-	Vi polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase	NA	M1HYW7	Paramecium_bursaria_Chlorella_virus	26.7	1.3e-21
AYT97388.1|4489930_4490470_-	Vi polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
AYT97389.1|4491323_4492835_+	DNA helicase	NA	A0A126DN25	Acinetobacter_phage	29.0	2.0e-42
AYT97390.1|4492818_4494408_+	hypothetical protein	NA	NA	NA	NA	NA
AYT97391.1|4494571_4495585_+|integrase	phage integrase	integrase	NA	NA	NA	NA
4495762:4495778	attL	GTGGTGCCCGGACTCGG	NA	NA	NA	NA
AYT97392.1|4496011_4496305_+	hypothetical protein	NA	NA	NA	NA	NA
AYT97393.1|4496301_4496790_+	hypothetical protein	NA	NA	NA	NA	NA
AYT97394.1|4496969_4497422_-	hypothetical protein	NA	NA	NA	NA	NA
AYT97395.1|4502644_4503106_+	hypothetical protein	NA	NA	NA	NA	NA
AYT97396.1|4503102_4503324_+	transcriptional regulator	NA	A0A2I7S995	Vibrio_phage	58.3	4.6e-17
AYT97397.1|4504180_4504963_+	hypothetical protein	NA	NA	NA	NA	NA
AYT97398.1|4505589_4505814_-	hypothetical protein	NA	NA	NA	NA	NA
AYT97399.1|4505943_4506948_-	SH3 domain-containing protein	NA	NA	NA	NA	NA
AYT97400.1|4507258_4508518_-|integrase	bacteriophage integrase	integrase	B7SYF8	Stenotrophomonas_phage	41.7	3.2e-78
4508677:4508693	attR	GTGGTGCCCGGACTCGG	NA	NA	NA	NA
