The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP029914	Salmonella enterica subsp. enterica serovar Typhi strain 343076_217103 chromosome, complete genome	4775784	930444	937756	4775784	protease,integrase	Dickeya_phage(16.67%)	6	931695:931709	942874:942888
AYT03583.1|930444_931563_+	hypothetical protein	NA	A0A140XAI1	Dickeya_phage	39.8	8.1e-09
AYT03584.1|931559_933506_+	macrolide transporter ATP-binding protein/permease	NA	G9BWD6	Planktothrix_phage	43.1	2.0e-39
931695:931709	attL	GGAAAATCAACGCTG	NA	NA	NA	NA
AYT03585.1|933635_933857_-	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.2	9.3e-18
AYT03586.1|934180_934501_+|protease	ATP-dependent Clp protease adaptor protein	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	4.5e-13
AYT03587.1|934531_936808_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.2	1.8e-164
AYT03588.1|937378_937756_-|integrase	integrase	integrase	A0A077KET4	Ralstonia_phage	41.0	1.2e-20
942874:942888	attR	CAGCGTTGATTTTCC	NA	NA	NA	NA
>prophage 2
CP029914	Salmonella enterica subsp. enterica serovar Typhi strain 343076_217103 chromosome, complete genome	4775784	1008803	1086116	4775784	integrase,terminase,tail,protease,transposase	Salmonella_phage(73.33%)	93	990882:990901	1061477:1061496
990882:990901	attL	AACGGCGCCGGGAAATCCAC	NA	NA	NA	NA
AYT03638.1|1008803_1010144_-|integrase	integrase	integrase	S4TSP2	Salmonella_phage	99.8	7.9e-261
AYT03639.1|1010140_1010389_-	excisionase	NA	S4TND0	Salmonella_phage	100.0	4.7e-42
AYT03640.1|1010429_1010675_-	bacteriophage protein	NA	S4TR31	Salmonella_phage	96.2	1.3e-36
AYT03641.1|1010674_1011556_-	DNA methylase	NA	A0A0M4R347	Salmonella_phage	93.0	1.2e-153
AYT03642.1|1011552_1012617_-	bacteriophage protein	NA	T1SBJ4	Salmonella_phage	74.6	6.3e-152
AYT03643.1|1012694_1013375_-	exonuclease	NA	A0A0M3ULE0	Salmonella_phage	98.7	1.9e-130
AYT03644.1|1013371_1014157_-	bacteriophage recombination protein	NA	A0A0M4RD39	Salmonella_phage	99.6	9.7e-150
AYT03645.1|1014162_1014459_-	host-nuclease inhibitor protein	NA	A0A0M5M5Z9	Salmonella_phage	96.9	4.4e-47
AYT03646.1|1014549_1014750_-	prophage Kil protein	NA	G8C7T2	Escherichia_phage	48.4	2.4e-12
AYT03647.1|1015038_1015443_-	DNA-binding protein	NA	H6WRX4	Salmonella_phage	99.3	7.1e-72
AYT03648.1|1015774_1016149_+	DNA-binding protein	NA	S4TTD7	Salmonella_phage	99.2	3.9e-64
AYT03649.1|1016233_1017217_+	bacteriophage protein	NA	H6WRX7	Salmonella_phage	99.7	2.1e-162
AYT03650.1|1017219_1017969_+	DNA replication protein	NA	S4TNF5	Salmonella_phage	99.6	3.6e-138
AYT03651.1|1017979_1018327_+	DNA-binding protein	NA	H6WRX9	Salmonella_phage	90.4	4.8e-53
AYT03652.1|1018323_1018848_+	bacteriophage protein	NA	A0A220NQV2	Salmonella_phage	99.4	1.8e-91
AYT03653.1|1018847_1019321_+	methyltransferase	NA	H9C170	Pectobacterium_phage	80.1	1.6e-67
AYT03654.1|1019324_1019897_+	bacteriophage protein	NA	S4TSR6	Salmonella_phage	68.0	1.3e-66
AYT03655.1|1019990_1020257_+	bacteriophage protein	NA	S4TNF2	Salmonella_phage	100.0	1.5e-46
AYT03656.1|1020338_1020500_+	bacteriophage protein	NA	NA	NA	NA	NA
AYT03657.1|1020932_1021430_+	bacteriophage protein	NA	NA	NA	NA	NA
AYT03658.1|1021614_1021854_+	damage-inducible protein	NA	H6WRY5	Salmonella_phage	100.0	3.9e-38
AYT03659.1|1021843_1022149_+	bacteriophage protein	NA	H6WRY6	Salmonella_phage	100.0	9.8e-42
AYT03660.1|1022188_1022791_+	bacteriophage protein	NA	S4TTI0	Salmonella_phage	99.5	7.5e-110
AYT03661.1|1022999_1023611_+	bacteriophage lambda protein NinG	NA	A0A0M4RU10	Salmonella_phage	99.5	2.5e-92
AYT03662.1|1023743_1024541_+	prophage antitermination protein	NA	A0A0M4S661	Salmonella_phage	99.2	3.4e-150
AYT03663.1|1024939_1025065_+	bacteriophage protein	NA	NA	NA	NA	NA
AYT03664.1|1025200_1025650_-	lipoprotein	NA	NA	NA	NA	NA
AYT03665.1|1025866_1026256_+	prophage membrane protein	NA	K7PHB9	Enterobacterial_phage	70.2	3.1e-40
AYT03666.1|1026242_1026524_+	prophage membrane protein	NA	K7PKN9	Enterobacterial_phage	80.6	2.6e-36
AYT03667.1|1026523_1027138_+	bacteriophage protein	NA	Q8HA86	Salmonella_phage	93.1	3.2e-108
AYT03668.1|1027357_1027612_+	hypothetical protein	NA	NA	NA	NA	NA
AYT03669.1|1027716_1028094_+	hypothetical protein	NA	Q6UAR9	Klebsiella_phage	68.5	4.9e-43
AYT03670.1|1028157_1028418_+	hypothetical protein	NA	NA	NA	NA	NA
AYT03671.1|1028507_1029260_+|terminase	prophage terminase small subunit	terminase	A0A0M3ULJ9	Salmonella_phage	56.5	3.4e-11
AYT03672.1|1029225_1030629_+	bacteriophage protein	NA	A0A077KAW0	Edwardsiella_phage	70.1	6.5e-189
AYT03673.1|1030628_1032098_+	hypothetical protein	NA	A0A0M4S6U1	Salmonella_phage	99.2	1.7e-280
AYT03674.1|1032189_1032720_+	hypothetical protein	NA	A0A0M4REK0	Salmonella_phage	87.4	8.7e-86
AYT03675.1|1032734_1033967_+	hypothetical protein	NA	A0A0M4R5A6	Salmonella_phage	99.0	1.4e-227
AYT03676.1|1033971_1034469_+	bacteriophage protein	NA	A0A0M4QWZ6	Salmonella_phage	99.4	8.7e-88
AYT03677.1|1034480_1035422_+	bacteriophage protein	NA	A0A0M3ULD3	Salmonella_phage	100.0	3.1e-179
AYT03678.1|1035463_1035832_+	bacteriophage protein	NA	A0A0M4RTX5	Salmonella_phage	100.0	8.7e-61
AYT03679.1|1035797_1036205_+	bacteriophage protein	NA	A0A0M5M3S2	Salmonella_phage	97.8	7.1e-72
AYT03680.1|1036201_1036756_+	bacteriophage protein	NA	A0A0M4S631	Salmonella_phage	100.0	4.8e-95
AYT03681.1|1036742_1037132_+	bacteriophage protein	NA	A0A0M3ULK0	Salmonella_phage	98.4	6.0e-68
AYT03682.1|1037106_1037670_+	bacteriophage protein	NA	A0A0M4R331	Salmonella_phage	75.3	8.9e-81
AYT03683.1|1037673_1038819_+	bacteriophage protein	NA	A0A2H4J8G4	uncultured_Caudovirales_phage	74.5	2.2e-163
AYT03684.1|1038830_1039271_+	bacteriophage protein	NA	A0A2H4J619	uncultured_Caudovirales_phage	74.7	3.5e-56
AYT03685.1|1039274_1039727_+	bacteriophage protein	NA	A0A0M4S6U8	Salmonella_phage	76.6	1.9e-57
AYT03686.1|1039904_1041857_+	bacteriophage protein	NA	A0A0M4REK7	Salmonella_phage	56.0	1.8e-181
AYT03687.1|1041856_1042507_+	bacteriophage protein	NA	A0A0M3ULD5	Salmonella_phage	60.6	3.0e-56
AYT03688.1|1042510_1042813_+	bacteriophage protein	NA	A0A2H4J495	uncultured_Caudovirales_phage	57.0	2.0e-26
AYT03689.1|1042815_1043847_+	bacteriophage protein	NA	A0A2H4J1B2	uncultured_Caudovirales_phage	51.4	1.2e-96
AYT03690.1|1043843_1044179_+	hypothetical protein	NA	A0A2H4J1A5	uncultured_Caudovirales_phage	52.2	1.1e-20
AYT03691.1|1044373_1045105_+	bacteriophage protein	NA	NA	NA	NA	NA
AYT03692.1|1045104_1045533_+	bacteriophage protein	NA	NA	NA	NA	NA
AYT03693.1|1045591_1046347_+	bacteriophage protein	NA	A0A0M5M1K7	Salmonella_phage	85.3	4.1e-105
AYT03694.1|1046434_1046572_+	bacteriophage protein	NA	A0A0M4S639	Salmonella_phage	100.0	2.0e-18
AYT03695.1|1046587_1046941_+	bacteriophage protein	NA	A0A0M4R339	Salmonella_phage	98.3	3.2e-60
AYT03696.1|1046941_1048141_+	bacteriophage protein	NA	A0A0M4RD32	Salmonella_phage	97.5	8.5e-214
AYT03697.1|1048137_1048818_+	bacteriophage protein	NA	A0A0M5M1K4	Salmonella_phage	98.7	6.9e-128
AYT03698.1|1048817_1050329_+|tail	bacteriophage tail protein	tail	S4TP62	Salmonella_phage	59.1	5.9e-111
AYT03699.1|1050343_1050862_+|tail	tail fiber protein	tail	A0A1B0VCD0	Salmonella_phage	62.8	1.7e-46
AYT03700.1|1051783_1052485_-	hypothetical protein	NA	NA	NA	NA	NA
AYT03701.1|1052797_1053076_-	hypothetical protein	NA	S4TNM0	Salmonella_phage	92.3	2.4e-26
AYT03702.1|1053501_1056114_+	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	22.6	1.1e-19
AYT03703.1|1056321_1057332_+	dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
AYT03704.1|1057494_1058040_+	hypothetical protein	NA	NA	NA	NA	NA
AYT03705.1|1058036_1059146_-	MOSC domain-containing protein	NA	NA	NA	NA	NA
AYT03706.1|1059244_1061353_+	23S rRNA m(2)G2445 methyltransferase	NA	W6LLI2	Streptococcus_phage	29.6	5.1e-20
AYT03707.1|1061365_1063273_+	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	29.8	2.4e-53
1061477:1061496	attR	AACGGCGCCGGGAAATCCAC	NA	NA	NA	NA
AYT03708.1|1063287_1064541_+	inner membrane protein	NA	NA	NA	NA	NA
AYT03709.1|1064545_1066186_+	paraquat-inducible protein B	NA	NA	NA	NA	NA
AYT03710.1|1066182_1066746_+	lipoprotein	NA	NA	NA	NA	NA
AYT03711.1|1066999_1067167_+	ribosome modulation factor	NA	NA	NA	NA	NA
AYT03712.1|1067266_1067785_-	D-3-hydroxydecanoyl-(acyl carrier-protein) dehydratase	NA	NA	NA	NA	NA
AYT03713.1|1067853_1069614_-|protease	ATP-dependent protease	protease	NA	NA	NA	NA
AYT03714.1|1069799_1070252_+	Ter macrodomain organizer matS-binding protein	NA	NA	NA	NA	NA
AYT03715.1|1070323_1071376_-	outer membrane protein A	NA	NA	NA	NA	NA
AYT03716.1|1071730_1072240_-	cell division inhibitor	NA	NA	NA	NA	NA
AYT03717.1|1072456_1073062_+	competence-specific transcriptional regulator TfoX	NA	NA	NA	NA	NA
AYT03718.1|1073048_1075202_-	inner membrane protein	NA	NA	NA	NA	NA
AYT03719.1|1075220_1075667_-	hypothetical protein	NA	NA	NA	NA	NA
AYT03720.1|1075790_1077845_+	helicase IV	NA	A7KV33	Bacillus_phage	27.6	6.5e-20
AYT03721.1|1077880_1078339_-	methylglyoxal synthase	NA	NA	NA	NA	NA
AYT03722.1|1078433_1079096_-	hypothetical protein	NA	NA	NA	NA	NA
AYT03723.1|1079266_1079683_+	hypothetical protein	NA	NA	NA	NA	NA
AYT03724.1|1079727_1080045_-	heat shock protein HspQ	NA	NA	NA	NA	NA
AYT03725.1|1080102_1081314_-	23S rRNA m(5)C1962 methyltransferase	NA	NA	NA	NA	NA
AYT03726.1|1082445_1082904_+|transposase	insertion sequence element IS200 transposase	transposase	NA	NA	NA	NA
AYT03727.1|1083640_1083922_+	acylphosphatase	NA	NA	NA	NA	NA
AYT03728.1|1083918_1084248_-	sulfite reductase	NA	NA	NA	NA	NA
AYT03729.1|1084334_1084994_-	hypothetical protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	52.4	2.7e-44
AYT03730.1|1085657_1086116_+|transposase	insertion sequence element IS200 transposase	transposase	NA	NA	NA	NA
>prophage 3
CP029914	Salmonella enterica subsp. enterica serovar Typhi strain 343076_217103 chromosome, complete genome	4775784	1531042	1605036	4775784	plate,tail,protease,transposase,head,tRNA	Burkholderia_virus(43.24%)	80	NA	NA
AYT04130.1|1531042_1531501_-|transposase	insertion sequence element IS200 transposase	transposase	NA	NA	NA	NA
AYT04131.1|1532003_1532285_+	stress response protein	NA	NA	NA	NA	NA
AYT04132.1|1532553_1533375_+|protease	serine protease	protease	NA	NA	NA	NA
AYT04133.1|1533409_1533739_-	multidrug efflux system protein MdtI	NA	NA	NA	NA	NA
AYT04134.1|1533725_1534088_-	multidrug efflux system protein MdtJ	NA	NA	NA	NA	NA
AYT04135.1|1534199_1534370_-	hypothetical protein	NA	NA	NA	NA	NA
AYT04136.1|1534504_1535539_+	hypothetical protein	NA	NA	NA	NA	NA
AYT04137.1|1535713_1537102_-	pyridine nucleotide transhydrogenase subunit beta	NA	NA	NA	NA	NA
AYT04138.1|1537112_1538642_-	pyridine nucleotide transhydrogenase subunit alpha	NA	NA	NA	NA	NA
AYT04139.1|1539168_1540113_+	hypothetical protein	NA	NA	NA	NA	NA
AYT04140.1|1540294_1540684_-	bacteriophage transcriptional regulator	NA	Q6QIE8	Burkholderia_phage	54.2	4.5e-31
AYT04141.1|1540655_1541108_-	hypothetical protein	NA	A4JWM5	Burkholderia_virus	46.6	1.2e-24
AYT04142.1|1541302_1541533_-	hypothetical protein	NA	NA	NA	NA	NA
AYT04143.1|1541529_1542213_-	hypothetical protein	NA	A0A2P9JZH4	Alteromonadaceae_phage	37.3	2.6e-34
AYT04144.1|1542209_1542425_-	hypothetical protein	NA	NA	NA	NA	NA
AYT04145.1|1542417_1542801_-	hypothetical protein	NA	K7PJQ4	Enterobacteria_phage	58.9	2.3e-27
AYT04146.1|1542797_1543100_-	hypothetical protein	NA	NA	NA	NA	NA
AYT04147.1|1543109_1543382_-	hypothetical protein	NA	NA	NA	NA	NA
AYT04148.1|1543670_1544201_-	bacteriophage host-nuclease inhibitor protein	NA	L7P7T1	Pseudomonas_phage	66.1	3.4e-58
AYT04149.1|1544228_1544498_-	hypothetical protein	NA	NA	NA	NA	NA
AYT04150.1|1544500_1545667_-	ExeA protein	NA	A4JWN1	Burkholderia_virus	59.7	3.3e-122
AYT04151.1|1545677_1547447_-	hypothetical protein	NA	Q6QIE0	Burkholderia_phage	68.5	2.8e-229
AYT04152.1|1547624_1548056_-	hypothetical protein	NA	A4JWN3	Burkholderia_virus	57.3	4.5e-32
AYT04153.1|1548051_1549044_+	nucleoid-associated protein	NA	A0A291AUQ0	Sinorhizobium_phage	37.3	3.0e-55
AYT04154.1|1549287_1549638_+	hypothetical protein	NA	A4JWP3	Burkholderia_virus	53.0	4.5e-22
AYT04155.1|1550352_1551003_+	lipoprotein	NA	Q5ZQY9	Pseudomonas_phage	32.9	8.1e-09
AYT04156.1|1550999_1551326_+	hypothetical protein	NA	Q6QIC4	Burkholderia_phage	49.5	9.6e-19
AYT04157.1|1551325_1551637_+	hypothetical protein	NA	A0A0S4L0A3	Pseudomonas_phage	62.6	9.4e-32
AYT04158.1|1551636_1552182_+	hypothetical protein	NA	A4JWJ3	Burkholderia_virus	67.6	9.3e-59
AYT04159.1|1552178_1553774_+	hypothetical protein	NA	A4JWJ4	Burkholderia_virus	62.6	9.3e-184
AYT04160.1|1553773_1555270_+	hypothetical protein	NA	A4JWJ5	Burkholderia_virus	59.6	8.0e-169
AYT04161.1|1555250_1556072_+|head	phage head morphogenesis protein	head	A4JWJ6	Burkholderia_virus	61.2	5.3e-98
AYT04162.1|1556074_1556533_+	bacteriophage protein	NA	Q6QIB8	Burkholderia_phage	44.8	1.5e-30
AYT04163.1|1556747_1557863_+	hypothetical protein	NA	A4JWJ9	Burkholderia_virus	51.1	7.9e-97
AYT04164.1|1557877_1558831_+	hypothetical protein	NA	A4JWK0	Burkholderia_virus	44.5	5.2e-65
AYT04165.1|1558840_1559179_+	hypothetical protein	NA	NA	NA	NA	NA
AYT04166.1|1559180_1559627_+	hypothetical protein	NA	A4JWK2	Burkholderia_virus	52.3	2.2e-34
AYT04167.1|1559626_1560091_+	hypothetical protein	NA	Q6QIB2	Burkholderia_phage	51.7	9.1e-39
AYT04168.1|1560087_1560342_+	hypothetical protein	NA	NA	NA	NA	NA
AYT04169.1|1560331_1561759_+|tail	bacteriophage tail sheath protein	tail	A4JWK5	Burkholderia_virus	77.4	3.7e-216
AYT04170.1|1561758_1562280_+|tail	tail core protein	tail	A4JWK6	Burkholderia_virus	68.2	8.0e-68
AYT04171.1|1562282_1562564_+	hypothetical protein	NA	NA	NA	NA	NA
AYT04172.1|1562661_1562997_+	hypothetical protein	NA	NA	NA	NA	NA
AYT04173.1|1563173_1565639_+	bacteriophage protein	NA	A4JWL0	Burkholderia_virus	42.6	2.2e-168
AYT04174.1|1565638_1566523_+	hypothetical protein	NA	A4JWL1	Burkholderia_virus	47.0	7.5e-50
AYT04175.1|1566519_1566735_+|tail	bacteriophage tail fiber protein	tail	Q6QIA3	Burkholderia_phage	60.0	2.4e-18
AYT04176.1|1566722_1567877_+	bacteriophage regulatory protein	NA	Q6QIA2	Burkholderia_phage	47.1	4.7e-84
AYT04177.1|1567873_1568401_+|plate	bacteriophage baseplate protein	plate	Q6QIA1	Burkholderia_phage	46.5	1.5e-21
AYT04178.1|1568457_1568805_+|plate	bacteriophage baseplate protein	plate	Q6QIA0	Burkholderia_phage	60.6	8.6e-34
AYT04179.1|1568795_1569899_+|plate	bacteriophage baseplate assembly protein	plate	Q6QI99	Burkholderia_phage	54.3	5.4e-106
AYT04180.1|1569891_1570470_+|tail	bacteriophage tail fiber protein	tail	A4JWL7	Burkholderia_virus	65.8	6.4e-66
AYT04181.1|1571287_1571497_+|tail	phage tail protein	tail	NA	NA	NA	NA
AYT04182.1|1572010_1572628_+|tail	bacteriophage tail fiber assembly protein	tail	Q9MCR5	Enterobacteria_phage	59.9	5.8e-65
AYT04183.1|1574138_1574711_+	DNA-invertase	NA	A0A0A7NPV4	Enterobacteria_phage	84.7	8.8e-84
AYT04184.1|1574991_1576374_+	amino acid permease	NA	NA	NA	NA	NA
AYT04185.1|1576435_1576771_-	hypothetical protein	NA	NA	NA	NA	NA
AYT04186.1|1576897_1577629_+	two-component response regulator	NA	NA	NA	NA	NA
AYT04187.1|1578109_1579261_+	outer membrane protein	NA	Q1MVN1	Enterobacteria_phage	59.1	3.2e-117
AYT04188.1|1579413_1581120_+	metal-dependent hydrolase	NA	NA	NA	NA	NA
AYT04189.1|1581227_1582532_+	two component sensor kinase	NA	W8CYF6	Bacillus_phage	22.7	5.7e-14
AYT04190.1|1582607_1583537_+	DNA sequence-specific contrahelicase	NA	NA	NA	NA	NA
AYT04191.1|1583533_1584937_-	fumarate hydratase class II	NA	NA	NA	NA	NA
AYT04192.1|1585104_1586751_-	Fumarate hydratase class I	NA	NA	NA	NA	NA
AYT04193.1|1586950_1588126_+	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
AYT04194.1|1588228_1589737_+	hypothetical protein	NA	NA	NA	NA	NA
AYT04195.1|1590442_1591444_+	adenosine deaminase	NA	NA	NA	NA	NA
AYT04196.1|1591517_1592633_-	oxidoreductase	NA	NA	NA	NA	NA
AYT04197.1|1592735_1592891_+	hypothetical protein	NA	NA	NA	NA	NA
AYT04198.1|1593189_1593405_+	oriC-binding nucleoid-associated protein	NA	NA	NA	NA	NA
AYT04199.1|1593493_1593934_+	hypothetical protein	NA	NA	NA	NA	NA
AYT04200.1|1594010_1594592_+	Na(+)-translocating NADH-quinone reductase subunit E	NA	NA	NA	NA	NA
AYT04201.1|1594591_1595170_+	ferredoxin-like protein	NA	NA	NA	NA	NA
AYT04202.1|1595162_1597184_+	NADH reducing dehydrogenase	NA	NA	NA	NA	NA
AYT04203.1|1597184_1598243_+	electron transport complex protein RnfD	NA	NA	NA	NA	NA
AYT04204.1|1598246_1598867_+	electron transport complex protein RnfG	NA	NA	NA	NA	NA
AYT04205.1|1598869_1599562_+	electron transport complex protein RsxE	NA	NA	NA	NA	NA
AYT04206.1|1599561_1600197_+	endonuclease III	NA	NA	NA	NA	NA
AYT04207.1|1600797_1602303_+	proton/oligopeptide symporter	NA	NA	NA	NA	NA
AYT04208.1|1602407_1603013_+	glutathione S-transferase	NA	NA	NA	NA	NA
AYT04209.1|1603761_1605036_-|tRNA	tyrosyl-tRNA synthetase	tRNA	K4F5T3	Cronobacter_phage	42.1	1.6e-85
>prophage 4
CP029914	Salmonella enterica subsp. enterica serovar Typhi strain 343076_217103 chromosome, complete genome	4775784	1786081	1790493	4775784		Escherichia_phage(50.0%)	6	NA	NA
AYT04393.1|1786081_1786321_+	virulence protein	NA	K7P6H1	Enterobacteria_phage	88.6	8.5e-33
AYT04394.1|1787193_1788003_+	toxin-like protein	NA	A5LH53	Enterobacteria_phage	50.0	2.1e-62
AYT04395.1|1788075_1788453_+	hypothetical protein	NA	I1TQ41	Pseudomonas_phage	38.4	2.2e-14
AYT04396.1|1788600_1789143_-	hypothetical protein	NA	A0A0U2S643	Escherichia_phage	67.0	6.2e-71
AYT04397.1|1789334_1790063_-	pertussis toxin subunit ArtA	NA	A0A0U2KD26	Escherichia_phage	53.3	4.9e-63
AYT04398.1|1790079_1790493_-	pertussis-like toxin subunit	NA	A0A0U2KD34	Escherichia_phage	38.6	1.4e-19
>prophage 5
CP029914	Salmonella enterica subsp. enterica serovar Typhi strain 343076_217103 chromosome, complete genome	4775784	2086031	2096538	4775784		Enterobacteria_phage(37.5%)	10	NA	NA
AYT04671.1|2086031_2087345_-	dehydratase RfbH	NA	H8ZJ36	Ostreococcus_tauri_virus	35.1	7.0e-52
AYT04672.1|2087371_2088451_-	CDP-glucose 4,6-dehydratase	NA	A0A222YY99	Synechococcus_phage	24.1	1.3e-16
AYT04673.1|2088455_2089229_-	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
AYT04674.1|2089244_2090219_-	reductase RfbI	NA	NA	NA	NA	NA
AYT04675.1|2090224_2090776_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	58.6	7.7e-53
AYT04676.1|2090776_2091655_-	TDP-glucose pyrophosphorylase	NA	I7I009	Enterobacteria_phage	64.8	2.3e-107
AYT04677.1|2091702_2092602_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	36.3	7.9e-31
AYT04678.1|2092601_2093687_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	53.9	1.6e-102
AYT04679.1|2094063_2094957_-	UTP-glucose-1-phosphate uridylyltransferase	NA	A0A127AW70	Bacillus_phage	42.2	4.8e-44
AYT04680.1|2095134_2096538_-	colanic acid biosynthesis protein WcaM	NA	A0A291LBB9	Klebsiella_phage	26.5	1.1e-21
>prophage 6
CP029914	Salmonella enterica subsp. enterica serovar Typhi strain 343076_217103 chromosome, complete genome	4775784	2172431	2181599	4775784	tRNA	Enterobacteria_phage(66.67%)	10	NA	NA
AYT04743.1|2172431_2174465_+|tRNA	methionyl-tRNA synthetase	tRNA	A0A1V0SDF2	Indivirus	26.9	6.1e-55
AYT04744.1|2174705_2175164_+	lipoprotein	NA	Q9EYF5	Enterobacteria_phage	72.5	8.4e-53
AYT04745.1|2175335_2175866_+	lipoprotein	NA	NA	NA	NA	NA
AYT04746.1|2175922_2176390_-	hypothetical protein	NA	Q9EYF4	Enterobacteria_phage	90.3	3.9e-74
AYT04747.1|2176436_2177156_-	two-component system response regulator	NA	NA	NA	NA	NA
AYT04748.1|2177152_2178835_-	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	89.7	4.3e-272
AYT04749.1|2179057_2179789_+	transcriptional regulator	NA	Q9EYF2	Enterobacteria_phage	87.9	4.5e-101
AYT04750.1|2179848_2179956_+	hypothetical protein	NA	NA	NA	NA	NA
AYT04751.1|2179936_2180668_-	ABC transporter permease	NA	NA	NA	NA	NA
AYT04752.1|2180651_2181599_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.2	1.7e-23
>prophage 7
CP029914	Salmonella enterica subsp. enterica serovar Typhi strain 343076_217103 chromosome, complete genome	4775784	2717035	2730427	4775784	tail	Salmonella_phage(70.0%)	11	NA	NA
AYT05181.1|2717035_2717254_-	hypothetical protein	NA	Q53ZE7	Salmonella_virus	71.9	1.9e-18
AYT05182.1|2717344_2718445_-	hypothetical protein	NA	A0A1S6KZZ5	Salmonella_phage	88.3	1.0e-176
AYT05183.1|2718441_2718927_-|tail	bacteriophage tail protein	tail	E5G6Q2	Salmonella_phage	80.0	2.4e-66
AYT05184.1|2718923_2722001_-|tail	bacteriophage tail protein	tail	E5G6Q1	Salmonella_phage	63.1	0.0e+00
AYT05185.1|2721993_2722113_-	bacteriophage protein	NA	E5G6Q0	Salmonella_phage	87.2	2.8e-13
AYT05186.1|2722127_2722430_-|tail	phage tail protein	tail	A0A1S6KZZ9	Salmonella_phage	89.0	7.0e-40
AYT05187.1|2722484_2723000_-|tail	major tail tube protein	tail	A0A1S6L002	Salmonella_phage	95.9	5.6e-90
AYT05188.1|2723009_2724182_-|tail	bacteriophage major tail sheath protein	tail	A0A1S6KZY7	Salmonella_phage	90.3	3.5e-204
AYT05189.1|2724324_2724897_-	DNA-invertase	NA	A0A0F7LA37	Escherichia_phage	86.3	1.4e-86
AYT05190.1|2725574_2726690_+	glycosyltransferase	NA	NA	NA	NA	NA
AYT05191.1|2726770_2730427_+	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	28.6	1.0e-44
>prophage 8
CP029914	Salmonella enterica subsp. enterica serovar Typhi strain 343076_217103 chromosome, complete genome	4775784	3061612	3105315	4775784	bacteriocin,protease,transposase,tRNA	Bacillus_virus(33.33%)	44	NA	NA
AYT05496.1|3061612_3062071_-|transposase	insertion sequence element IS200 transposase	transposase	NA	NA	NA	NA
AYT05497.1|3062260_3063340_-	fructose 1,6-bisphosphate aldolase	NA	NA	NA	NA	NA
AYT05498.1|3063441_3064605_-	phosphoglycerate kinase	NA	NA	NA	NA	NA
AYT05499.1|3064626_3065673_-	D-erythrose 4-phosphate dehydrogenase	NA	NA	NA	NA	NA
AYT05500.1|3066046_3066472_+	hypothetical protein	NA	NA	NA	NA	NA
AYT05501.1|3066497_3067076_+	hypothetical protein	NA	NA	NA	NA	NA
AYT05502.1|3067109_3067784_+	hypothetical protein	NA	NA	NA	NA	NA
AYT05503.1|3067765_3068449_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
AYT05504.1|3068442_3069099_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	28.6	1.6e-09
AYT05505.1|3069203_3069662_-|transposase	insertion sequence element IS200 transposase	transposase	NA	NA	NA	NA
AYT05506.1|3069850_3071842_-	transketolase	NA	NA	NA	NA	NA
AYT05507.1|3072117_3072876_+|protease	metalloprotease	protease	NA	NA	NA	NA
AYT05508.1|3072976_3073897_-	agmatine ureohydrolase	NA	NA	NA	NA	NA
AYT05509.1|3074124_3076101_-	biosynthetic arginine decarboxylase	NA	NA	NA	NA	NA
AYT05510.1|3076109_3076241_-	hypothetical protein	NA	NA	NA	NA	NA
AYT05511.1|3076535_3076835_-	membrane protein	NA	NA	NA	NA	NA
AYT05512.1|3076890_3078045_+	S-adenosylmethionine synthetase	NA	A0A2H4PQS6	Staphylococcus_phage	63.9	1.5e-130
AYT05513.1|3078537_3079932_+	galactose-proton symport	NA	NA	NA	NA	NA
AYT05514.1|3080010_3080508_+	hypothetical protein	NA	NA	NA	NA	NA
AYT05515.1|3080603_3081311_+	endonuclease I	NA	NA	NA	NA	NA
AYT05516.1|3081387_3082119_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
AYT05517.1|3082138_3083086_+	glutathione synthetase	NA	NA	NA	NA	NA
AYT05518.1|3083301_3083865_+	hypothetical protein	NA	NA	NA	NA	NA
AYT05519.1|3083864_3084281_+	Holliday junction resolvase	NA	NA	NA	NA	NA
AYT05520.1|3084327_3085014_-	global regulatory protein	NA	NA	NA	NA	NA
AYT05521.1|3085143_3086124_-	type II secretion system ATP-binding protein	NA	NA	NA	NA	NA
AYT05522.1|3086141_3086846_+	hypothetical protein	NA	NA	NA	NA	NA
AYT05523.1|3086864_3087431_+	hypothetical protein	NA	NA	NA	NA	NA
AYT05524.1|3087427_3087718_+	hypothetical protein	NA	NA	NA	NA	NA
AYT05525.1|3087725_3088319_+	dITP/XTP pyrophosphatase	NA	NA	NA	NA	NA
AYT05526.1|3088311_3089448_+	oxygen-independent coproporphyrinogen III oxidase	NA	NA	NA	NA	NA
AYT05527.1|3089538_3090546_-	hypothetical protein	NA	NA	NA	NA	NA
AYT05528.1|3090678_3091725_-	L-asparaginase	NA	NA	NA	NA	NA
AYT05529.1|3092043_3092502_+|transposase	insertion sequence element IS200 transposase	transposase	NA	NA	NA	NA
AYT05530.1|3092624_3093344_-	hypothetical protein	NA	NA	NA	NA	NA
AYT05531.1|3093393_3093720_-	hypothetical protein	NA	NA	NA	NA	NA
AYT05532.1|3093719_3094439_-|tRNA	tRNA m(7)G46 methyltransferase	tRNA	NA	NA	NA	NA
AYT05533.1|3094593_3095646_+	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
AYT05534.1|3095673_3095949_+	oxidative damage protection protein	NA	NA	NA	NA	NA
AYT05535.1|3096061_3097147_+	membrane-bound lytic murein transglycosylase C	NA	A0A0H3V0Q1	Geobacillus_virus	39.0	5.8e-12
AYT05536.1|3097363_3098620_+	nucleoside permease	NA	NA	NA	NA	NA
AYT05537.1|3101230_3101938_+	hypothetical protein	NA	NA	NA	NA	NA
AYT05538.1|3104527_3104794_+|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
AYT05539.1|3105036_3105315_+|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
>prophage 9
CP029914	Salmonella enterica subsp. enterica serovar Typhi strain 343076_217103 chromosome, complete genome	4775784	3480980	3519038	4775784	portal,integrase,plate,terminase,tail,capsid,transposase	Salmonella_phage(82.05%)	46	3475944:3475958	3488110:3488124
3475944:3475958	attL	CGAATTTCTTTTTCA	NA	NA	NA	NA
AYT05867.1|3480980_3482627_-	acetolactate synthase large subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	31.5	9.0e-65
AYT05868.1|3482766_3482865_-	ilvGMEDA operon attenuator peptide	NA	NA	NA	NA	NA
AYT05869.1|3483120_3483450_+	hypothetical protein	NA	NA	NA	NA	NA
AYT05870.1|3483490_3484543_-|integrase	bacteriophage integrase	integrase	A0A218M4I3	Erwinia_phage	57.3	3.6e-107
AYT05871.1|3484938_3485508_-	repressor protein	NA	A0A1S6KZZ7	Salmonella_phage	43.4	2.5e-38
AYT05872.1|3485633_3485855_+	hypothetical protein	NA	NA	NA	NA	NA
AYT05873.1|3485887_3486397_+	regulatory protein cII	NA	E5G6L3	Salmonella_phage	98.8	5.8e-87
AYT05874.1|3486571_3486796_+	hypothetical protein	NA	NA	NA	NA	NA
AYT05875.1|3486818_3487160_+	hypothetical protein	NA	E5G6L5	Salmonella_phage	98.2	1.7e-55
AYT05876.1|3487227_3487461_+	hypothetical protein	NA	E5G6L6	Salmonella_phage	94.8	2.0e-31
AYT05877.1|3487460_3487688_+	hypothetical protein	NA	E5G6L7	Salmonella_phage	100.0	2.7e-36
AYT05878.1|3487684_3488542_+	DNA adenine methylase	NA	E5G6L8	Salmonella_phage	97.2	3.5e-161
3488110:3488124	attR	TGAAAAAGAAATTCG	NA	NA	NA	NA
AYT05879.1|3488538_3490953_+	endonuclease	NA	E5G6L9	Salmonella_phage	97.5	0.0e+00
AYT05880.1|3491106_3491295_+	hypothetical protein	NA	E5G6M0	Salmonella_phage	95.2	7.9e-26
AYT05881.1|3493262_3494177_+	hypothetical protein	NA	NA	NA	NA	NA
AYT05882.1|3494173_3494914_+	hypothetical protein	NA	NA	NA	NA	NA
AYT05883.1|3494948_3495986_-|capsid,portal	capsid portal protein	capsid,portal	A0A1S6KZW5	Salmonella_phage	89.5	1.3e-173
AYT05884.1|3495985_3497752_-|terminase	terminase subunit	terminase	A0A1S6KZW3	Salmonella_phage	99.5	0.0e+00
AYT05885.1|3497894_3498728_+|capsid	capsid scaffolding protein	capsid	A0A1S6KZW9	Salmonella_phage	90.6	1.5e-121
AYT05886.1|3498744_3499803_+|capsid	major capsid protein	capsid	E5G6M6	Salmonella_phage	93.1	1.4e-180
AYT05887.1|3499806_3500457_+|terminase	terminase endonuclease subunit	terminase	E5G6M7	Salmonella_phage	96.3	8.7e-112
AYT05888.1|3500489_3501017_+|capsid	capsid completion protein	capsid	A0A1S6KZW8	Salmonella_phage	89.0	2.1e-76
AYT05889.1|3501016_3501220_+|tail	phage tail protein	tail	E5G6M9	Salmonella_phage	92.5	1.4e-31
AYT05890.1|3501223_3501439_+	hypothetical protein	NA	E5G6N0	Salmonella_phage	80.3	1.8e-26
AYT05891.1|3501458_3501932_+	lysozyme	NA	E5G6N1	Salmonella_phage	91.0	3.7e-80
AYT05892.1|3501933_3502311_+	hypothetical protein	NA	A0A1S6KZZ2	Salmonella_phage	40.0	2.3e-16
AYT05893.1|3502307_3502736_+	regulatory protein	NA	E5G6N2	Salmonella_phage	77.3	2.2e-47
AYT05894.1|3502831_3503263_+|tail	phage tail protein	tail	E5G6N3	Salmonella_phage	95.1	1.5e-72
AYT05895.1|3503255_3503702_+|tail	phage tail protein	tail	A0A1S6L001	Salmonella_phage	85.6	6.6e-63
AYT05896.1|3503770_3504349_+|plate	phage baseplate assembly protein	plate	A0A1S6KZX7	Salmonella_phage	86.5	5.5e-94
AYT05897.1|3504345_3504705_+|plate	phage baseplate assembly protein	plate	A0A1S6KZZ4	Salmonella_phage	84.9	6.1e-51
AYT05898.1|3504691_3505600_+|plate	phage baseplate assembly protein	plate	A0A1S6KZY6	Salmonella_phage	89.7	1.3e-142
AYT05899.1|3505592_3506198_+|tail	phage tail protein	tail	A0A1S6L000	Salmonella_phage	92.0	2.0e-110
AYT05900.1|3506194_3507709_+|tail	variable tail fiber protein	tail	M1TAS6	Escherichia_phage	73.2	6.8e-200
AYT05901.1|3507708_3508302_+|tail	tail fiber assembly protein	tail	M1SV83	Escherichia_phage	64.3	9.2e-60
AYT05902.1|3508273_3508714_-|tail	tail fiber assembly protein	tail	A0A0F7LDZ0	Escherichia_phage	68.0	3.1e-52
AYT05903.1|3509136_3509709_+	DNA-invertase	NA	A0A0F7LA37	Escherichia_phage	86.3	1.4e-86
AYT05904.1|3509851_3511024_+|tail	major tail sheath protein	tail	A0A1S6KZY7	Salmonella_phage	90.3	3.5e-204
AYT05905.1|3511033_3511549_+|tail	major tail tube protein	tail	A0A1S6L002	Salmonella_phage	95.9	5.6e-90
AYT05906.1|3511603_3511906_+|tail	phage tail protein	tail	A0A1S6KZZ9	Salmonella_phage	89.0	7.0e-40
AYT05907.1|3511920_3512040_+	bacteriophage protein	NA	E5G6Q0	Salmonella_phage	87.2	2.8e-13
AYT05908.1|3512032_3515110_+|tail	bacteriophage tail protein	tail	E5G6Q1	Salmonella_phage	63.1	0.0e+00
AYT05909.1|3515106_3515592_+|tail	bacteriophage tail protein	tail	E5G6Q2	Salmonella_phage	80.0	2.4e-66
AYT05910.1|3515588_3516689_+	hypothetical protein	NA	A0A1S6KZZ5	Salmonella_phage	88.3	1.0e-176
AYT05911.1|3516779_3516998_+	hypothetical protein	NA	Q53ZE7	Salmonella_virus	69.0	7.5e-20
AYT05912.1|3518579_3519038_+|transposase	insertion sequence element IS200 transposase	transposase	NA	NA	NA	NA
>prophage 10
CP029914	Salmonella enterica subsp. enterica serovar Typhi strain 343076_217103 chromosome, complete genome	4775784	4434508	4508778	4775784	portal,integrase,plate,terminase,tail,capsid	Salmonella_phage(82.61%)	75	4496022:4496038	4508937:4508953
AYT06689.1|4434508_4436458_+	hypothetical protein	NA	A0A2K9V411	Faecalibacterium_phage	38.3	5.9e-31
AYT06690.1|4436529_4437438_+	hypothetical protein	NA	NA	NA	NA	NA
AYT06691.1|4437511_4438411_+	hypothetical protein	NA	NA	NA	NA	NA
AYT06692.1|4438452_4438812_+	hypothetical protein	NA	NA	NA	NA	NA
AYT06693.1|4438911_4439181_-	hypothetical protein	NA	NA	NA	NA	NA
AYT06694.1|4439312_4440587_-	UV protection protein	NA	F1C5A5	Cronobacter_phage	62.0	7.5e-152
AYT06695.1|4440806_4441184_+	hypothetical protein	NA	NA	NA	NA	NA
AYT06696.1|4441270_4441489_-	hypothetical protein	NA	E5G6Q4	Salmonella_phage	75.0	4.9e-27
AYT06697.1|4441556_4442657_-	hypothetical protein	NA	E5G6Q3	Salmonella_phage	92.1	7.9e-190
AYT06698.1|4442653_4443139_-|tail	phage tail protein	tail	E5G6Q2	Salmonella_phage	93.2	9.4e-71
AYT06699.1|4443138_4445919_-	hypothetical protein	NA	A0A2H4JGB2	uncultured_Caudovirales_phage	41.1	3.5e-125
AYT06700.1|4445911_4446031_-	bacteriophage protein	NA	E5G6Q0	Salmonella_phage	94.9	1.2e-14
AYT06701.1|4446045_4446348_-|tail	phage tail protein	tail	E5G6P9	Salmonella_phage	93.9	3.3e-42
AYT06702.1|4446402_4446918_-|tail	major tail tube protein	tail	E5G6P8	Salmonella_phage	99.4	2.7e-92
AYT06703.1|4446927_4448100_-|tail	major tail sheath protein	tail	A0A1S6KZY7	Salmonella_phage	99.5	9.8e-223
AYT06704.1|4448634_4449357_+	invasion-associated secreted protein	NA	NA	NA	NA	NA
AYT06705.1|4449554_4449962_-|tail	phage tail fiber protein	tail	A0A1B0V844	Salmonella_phage	84.2	4.1e-59
AYT06706.1|4449968_4451588_-|tail	phage tail fiber protein	tail	E5G6P0	Salmonella_phage	90.9	2.7e-154
AYT06707.1|4451584_4452190_-|tail	phage tail protein	tail	A0A1S6L000	Salmonella_phage	92.0	2.0e-110
AYT06708.1|4452182_4453091_-|plate	phage baseplate assembly protein	plate	E5G6N8	Salmonella_phage	97.0	5.2e-155
AYT06709.1|4453077_4453437_-|plate	phage baseplate assembly protein	plate	A0A1S6KZZ4	Salmonella_phage	96.6	6.8e-58
AYT06710.1|4453433_4454012_-|plate	phage baseplate assembly protein	plate	E5G6N6	Salmonella_phage	99.5	3.9e-108
AYT06711.1|4454080_4454527_-|tail	phage tail completion protein	tail	A0A1S6L001	Salmonella_phage	90.4	2.2e-66
AYT06712.1|4454519_4454951_-|tail	phage tail protein	tail	A0A1S6KZY0	Salmonella_phage	99.3	1.1e-75
AYT06713.1|4455046_4455472_-	regulatory protein	NA	A0A1S6KZX8	Salmonella_phage	97.9	2.5e-67
AYT06714.1|4455471_4455849_-	hypothetical protein	NA	A0A1S6KZZ2	Salmonella_phage	99.2	1.5e-60
AYT06715.1|4455853_4456324_-	lysozyme	NA	A0A1S6KZY9	Salmonella_phage	97.4	1.0e-85
AYT06716.1|4456343_4456559_-	hypothetical protein	NA	E5G6N0	Salmonella_phage	98.6	3.8e-32
AYT06717.1|4456562_4456766_-|tail	phage tail protein	tail	E5G6M9	Salmonella_phage	100.0	3.8e-34
AYT06718.1|4456765_4457230_-|capsid	capsid completion protein	capsid	A0A1S6KZW8	Salmonella_phage	98.1	2.4e-84
AYT06719.1|4457323_4457974_-|terminase	phage terminase	terminase	E5G6M7	Salmonella_phage	99.5	2.4e-114
AYT06720.1|4457977_4459042_-|capsid	major capsid protein	capsid	A0A1S6KZZ3	Salmonella_phage	98.3	1.3e-194
AYT06721.1|4459058_4459892_-|capsid	capsid scaffolding protein	capsid	E5G6M5	Salmonella_phage	87.4	6.1e-126
AYT06722.1|4460034_4461801_+|terminase	terminase subunit	terminase	A0A1S6KZW3	Salmonella_phage	96.4	0.0e+00
AYT06723.1|4461797_4462844_+|capsid,portal	capsid portal protein	capsid,portal	A0A1S6KZW5	Salmonella_phage	86.6	2.1e-176
AYT06724.1|4462892_4463588_-	hypothetical protein	NA	NA	NA	NA	NA
AYT06725.1|4463607_4464672_-	hypothetical protein	NA	NA	NA	NA	NA
AYT06726.1|4464668_4465733_-	hypothetical protein	NA	NA	NA	NA	NA
AYT06727.1|4466657_4469066_-	replication endonuclease	NA	A0A1S6L028	Salmonella_phage	95.1	0.0e+00
AYT06728.1|4469056_4469917_-	DNA adenine methylase	NA	E5G6L8	Salmonella_phage	81.8	3.4e-132
AYT06729.1|4469913_4470498_-	exonuclease	NA	A0A1S6L012	Salmonella_phage	73.7	1.1e-76
AYT06730.1|4470494_4470722_-	hypothetical protein	NA	A0A1S6L007	Salmonella_phage	94.7	1.0e-35
AYT06731.1|4470721_4470955_-	hypothetical protein	NA	A0A1S6L021	Salmonella_phage	84.4	9.8e-26
AYT06732.1|4471022_4471364_-	hypothetical protein	NA	A0A1S6L019	Salmonella_phage	99.1	4.6e-56
AYT06733.1|4471327_4471528_-	hypothetical protein	NA	A0A1S6L005	Salmonella_phage	97.0	4.6e-32
AYT06734.1|4471535_4472045_-	phage regulatory protein	NA	A0A1S6L008	Salmonella_phage	94.1	1.3e-83
AYT06735.1|4472077_4472320_-	phage regulatory protein	NA	A0A1S6KZZ6	Salmonella_phage	98.8	2.3e-38
AYT06736.1|4472436_4473069_+	phage repressor protein cI	NA	A0A1S6KZZ7	Salmonella_phage	58.6	1.4e-66
AYT06737.1|4473072_4474098_+|integrase	phage integrase	integrase	A0A1S6L016	Salmonella_phage	98.2	2.7e-200
AYT06738.1|4474204_4474558_-	protein samA'	NA	I6S1S3	Salmonella_phage	59.3	6.7e-10
AYT06739.1|4475174_4475462_+	hypothetical protein	NA	NA	NA	NA	NA
AYT06740.1|4475472_4476363_+	methyltransferase	NA	NA	NA	NA	NA
AYT06741.1|4476362_4477109_+	hypothetical protein	NA	NA	NA	NA	NA
AYT06742.1|4477410_4479381_-	Vi polysaccharide exporter protein	NA	NA	NA	NA	NA
AYT06743.1|4479400_4480705_-	Vi polysaccharide exporter inner-membrane protein	NA	NA	NA	NA	NA
AYT06744.1|4480727_4481423_-	Vi polysaccharide exporter ATP-binding protein	NA	NA	NA	NA	NA
AYT06745.1|4481448_4482243_-	Vi polysaccharide exporter inner-membrane protein	NA	NA	NA	NA	NA
AYT06746.1|4482252_4483320_-	Vi polysaccharide exporter protein	NA	NA	NA	NA	NA
AYT06747.1|4483364_4485101_-	Vi polysaccharide biosynthesis protein TviE	NA	NA	NA	NA	NA
AYT06748.1|4485100_4487596_-	Vi polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
AYT06749.1|4487619_4488666_-	Vi polysaccharide biosynthesis epimerase	NA	A0A2K9L0I7	Tupanvirus	45.0	1.4e-74
AYT06750.1|4488668_4489946_-	Vi polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase	NA	M1HYW7	Paramecium_bursaria_Chlorella_virus	26.7	1.3e-21
AYT06751.1|4490190_4490730_-	Vi polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
AYT06752.1|4491583_4493095_+	DNA helicase	NA	A0A126DN25	Acinetobacter_phage	29.0	2.0e-42
AYT06753.1|4493078_4494668_+	hypothetical protein	NA	NA	NA	NA	NA
AYT06754.1|4494831_4495845_+|integrase	phage integrase	integrase	NA	NA	NA	NA
4496022:4496038	attL	GTGGTGCCCGGACTCGG	NA	NA	NA	NA
AYT06755.1|4496271_4496565_+	hypothetical protein	NA	NA	NA	NA	NA
AYT06756.1|4496561_4497050_+	hypothetical protein	NA	NA	NA	NA	NA
AYT06757.1|4497229_4497682_-	hypothetical protein	NA	NA	NA	NA	NA
AYT06758.1|4502904_4503366_+	hypothetical protein	NA	NA	NA	NA	NA
AYT06759.1|4503362_4503584_+	transcriptional regulator	NA	A0A2I7S995	Vibrio_phage	58.3	4.6e-17
AYT06760.1|4504440_4505223_+	hypothetical protein	NA	NA	NA	NA	NA
AYT06761.1|4505849_4506074_-	hypothetical protein	NA	NA	NA	NA	NA
AYT06762.1|4506203_4507208_-	SH3 domain-containing protein	NA	NA	NA	NA	NA
AYT06763.1|4507518_4508778_-|integrase	bacteriophage integrase	integrase	B7SYF8	Stenotrophomonas_phage	41.7	3.2e-78
4508937:4508953	attR	GTGGTGCCCGGACTCGG	NA	NA	NA	NA
