The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP029882	Salmonella enterica subsp. enterica serovar Typhi strain 343076_248190 chromosome, complete genome	4773823	930185	937497	4773823	integrase,protease	Dickeya_phage(16.67%)	6	931436:931450	942426:942440
AYT20726.1|930185_931304_+	hypothetical protein	NA	A0A140XAI1	Dickeya_phage	39.8	8.1e-09
AYT20727.1|931300_933247_+	macrolide transporter ATP-binding protein/permease	NA	G9BWD6	Planktothrix_phage	43.1	2.0e-39
931436:931450	attL	GGAAAATCAACGCTG	NA	NA	NA	NA
AYT20728.1|933376_933598_-	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.2	9.3e-18
AYT20729.1|933921_934242_+|protease	ATP-dependent Clp protease adaptor protein	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	4.5e-13
AYT20730.1|934272_936549_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.2	1.8e-164
AYT20731.1|937119_937497_-|integrase	integrase	integrase	A0A077KET4	Ralstonia_phage	41.0	1.2e-20
942426:942440	attR	CAGCGTTGATTTTCC	NA	NA	NA	NA
>prophage 2
CP029882	Salmonella enterica subsp. enterica serovar Typhi strain 343076_248190 chromosome, complete genome	4773823	1008237	1085550	4773823	tail,terminase,transposase,integrase,protease	Salmonella_phage(73.33%)	93	990316:990335	1060911:1060930
990316:990335	attL	AACGGCGCCGGGAAATCCAC	NA	NA	NA	NA
AYT20783.1|1008237_1009578_-|integrase	integrase	integrase	S4TSP2	Salmonella_phage	99.8	7.9e-261
AYT20784.1|1009574_1009823_-	excisionase	NA	S4TND0	Salmonella_phage	100.0	4.7e-42
AYT20785.1|1009863_1010109_-	bacteriophage protein	NA	S4TR31	Salmonella_phage	96.2	1.3e-36
AYT20786.1|1010108_1010990_-	DNA methylase	NA	A0A0M4R347	Salmonella_phage	93.0	1.2e-153
AYT20787.1|1010986_1012051_-	bacteriophage protein	NA	T1SBJ4	Salmonella_phage	74.6	6.3e-152
AYT20788.1|1012128_1012809_-	exonuclease	NA	A0A0M3ULE0	Salmonella_phage	98.7	1.9e-130
AYT20789.1|1012805_1013591_-	bacteriophage recombination protein	NA	A0A0M4RD39	Salmonella_phage	99.6	9.7e-150
AYT20790.1|1013596_1013893_-	host-nuclease inhibitor protein	NA	A0A0M5M5Z9	Salmonella_phage	96.9	4.4e-47
AYT20791.1|1013983_1014184_-	prophage Kil protein	NA	G8C7T2	Escherichia_phage	48.4	2.4e-12
AYT20792.1|1014472_1014877_-	DNA-binding protein	NA	H6WRX4	Salmonella_phage	99.3	7.1e-72
AYT20793.1|1015208_1015583_+	DNA-binding protein	NA	S4TTD7	Salmonella_phage	99.2	3.9e-64
AYT20794.1|1015667_1016651_+	bacteriophage protein	NA	H6WRX7	Salmonella_phage	99.7	2.1e-162
AYT20795.1|1016653_1017403_+	DNA replication protein	NA	S4TNF5	Salmonella_phage	99.6	3.6e-138
AYT20796.1|1017413_1017761_+	DNA-binding protein	NA	H6WRX9	Salmonella_phage	90.4	4.8e-53
AYT20797.1|1017757_1018282_+	bacteriophage protein	NA	A0A220NQV2	Salmonella_phage	99.4	1.8e-91
AYT20798.1|1018281_1018755_+	methyltransferase	NA	H9C170	Pectobacterium_phage	80.1	1.6e-67
AYT20799.1|1018758_1019331_+	bacteriophage protein	NA	S4TSR6	Salmonella_phage	68.0	1.3e-66
AYT20800.1|1019424_1019691_+	bacteriophage protein	NA	S4TNF2	Salmonella_phage	100.0	1.5e-46
AYT20801.1|1019772_1019934_+	bacteriophage protein	NA	NA	NA	NA	NA
AYT20802.1|1020366_1020864_+	bacteriophage protein	NA	NA	NA	NA	NA
AYT20803.1|1021048_1021288_+	damage-inducible protein	NA	H6WRY5	Salmonella_phage	100.0	3.9e-38
AYT20804.1|1021277_1021583_+	bacteriophage protein	NA	H6WRY6	Salmonella_phage	100.0	9.8e-42
AYT20805.1|1021622_1022225_+	bacteriophage protein	NA	S4TTI0	Salmonella_phage	99.5	7.5e-110
AYT20806.1|1022433_1023045_+	bacteriophage lambda protein NinG	NA	A0A0M4RU10	Salmonella_phage	99.5	2.5e-92
AYT20807.1|1023177_1023975_+	prophage antitermination protein	NA	A0A0M4S661	Salmonella_phage	99.2	3.4e-150
AYT20808.1|1024373_1024499_+	bacteriophage protein	NA	NA	NA	NA	NA
AYT20809.1|1024634_1025084_-	lipoprotein	NA	NA	NA	NA	NA
AYT20810.1|1025300_1025690_+	prophage membrane protein	NA	K7PHB9	Enterobacterial_phage	70.2	3.1e-40
AYT20811.1|1025676_1025958_+	prophage membrane protein	NA	K7PKN9	Enterobacterial_phage	80.6	2.6e-36
AYT20812.1|1025957_1026572_+	bacteriophage protein	NA	Q8HA86	Salmonella_phage	93.1	3.2e-108
AYT20813.1|1026791_1027046_+	hypothetical protein	NA	NA	NA	NA	NA
AYT20814.1|1027150_1027528_+	hypothetical protein	NA	Q6UAR9	Klebsiella_phage	68.5	4.9e-43
AYT20815.1|1027591_1027852_+	hypothetical protein	NA	NA	NA	NA	NA
AYT20816.1|1027941_1028694_+|terminase	prophage terminase small subunit	terminase	A0A0M3ULJ9	Salmonella_phage	56.5	3.4e-11
AYT20817.1|1028659_1030063_+	bacteriophage protein	NA	A0A077KAW0	Edwardsiella_phage	70.1	6.5e-189
AYT20818.1|1030062_1031532_+	hypothetical protein	NA	A0A0M4S6U1	Salmonella_phage	99.2	1.7e-280
AYT20819.1|1031623_1032154_+	hypothetical protein	NA	A0A0M4REK0	Salmonella_phage	87.4	8.7e-86
AYT20820.1|1032168_1033401_+	hypothetical protein	NA	A0A0M4R5A6	Salmonella_phage	99.0	1.4e-227
AYT20821.1|1033405_1033903_+	bacteriophage protein	NA	A0A0M4QWZ6	Salmonella_phage	99.4	8.7e-88
AYT20822.1|1033914_1034856_+	bacteriophage protein	NA	A0A0M3ULD3	Salmonella_phage	100.0	3.1e-179
AYT20823.1|1034897_1035266_+	bacteriophage protein	NA	A0A0M4RTX5	Salmonella_phage	100.0	8.7e-61
AYT20824.1|1035231_1035639_+	bacteriophage protein	NA	A0A0M5M3S2	Salmonella_phage	97.8	7.1e-72
AYT20825.1|1035635_1036190_+	bacteriophage protein	NA	A0A0M4S631	Salmonella_phage	100.0	4.8e-95
AYT20826.1|1036176_1036566_+	bacteriophage protein	NA	A0A0M3ULK0	Salmonella_phage	98.4	6.0e-68
AYT20827.1|1036540_1037104_+	bacteriophage protein	NA	A0A0M4R331	Salmonella_phage	75.3	8.9e-81
AYT20828.1|1037107_1038253_+	bacteriophage protein	NA	A0A2H4J8G4	uncultured_Caudovirales_phage	74.5	2.2e-163
AYT20829.1|1038264_1038705_+	bacteriophage protein	NA	A0A2H4J619	uncultured_Caudovirales_phage	74.7	3.5e-56
AYT20830.1|1038708_1039161_+	bacteriophage protein	NA	A0A0M4S6U8	Salmonella_phage	76.6	1.9e-57
AYT20831.1|1039338_1041291_+	bacteriophage protein	NA	A0A0M4REK7	Salmonella_phage	56.0	1.8e-181
AYT20832.1|1041290_1041941_+	bacteriophage protein	NA	A0A0M3ULD5	Salmonella_phage	60.6	3.0e-56
AYT20833.1|1041944_1042247_+	bacteriophage protein	NA	A0A2H4J495	uncultured_Caudovirales_phage	57.0	2.0e-26
AYT20834.1|1042249_1043281_+	bacteriophage protein	NA	A0A2H4J1B2	uncultured_Caudovirales_phage	51.4	1.2e-96
AYT20835.1|1043277_1043613_+	hypothetical protein	NA	A0A2H4J1A5	uncultured_Caudovirales_phage	52.2	1.1e-20
AYT20836.1|1043807_1044539_+	bacteriophage protein	NA	NA	NA	NA	NA
AYT20837.1|1044538_1044967_+	bacteriophage protein	NA	NA	NA	NA	NA
AYT20838.1|1045025_1045781_+	bacteriophage protein	NA	A0A0M5M1K7	Salmonella_phage	85.3	4.1e-105
AYT20839.1|1045868_1046006_+	bacteriophage protein	NA	A0A0M4S639	Salmonella_phage	100.0	2.0e-18
AYT20840.1|1046021_1046375_+	bacteriophage protein	NA	A0A0M4R339	Salmonella_phage	98.3	3.2e-60
AYT20841.1|1046375_1047575_+	bacteriophage protein	NA	A0A0M4RD32	Salmonella_phage	97.5	8.5e-214
AYT20842.1|1047571_1048252_+	bacteriophage protein	NA	A0A0M5M1K4	Salmonella_phage	98.7	6.9e-128
AYT20843.1|1048251_1049763_+|tail	bacteriophage tail protein	tail	S4TP62	Salmonella_phage	59.1	5.9e-111
AYT20844.1|1049777_1050296_+|tail	tail fiber protein	tail	A0A1B0VCD0	Salmonella_phage	62.8	1.7e-46
AYT20845.1|1051217_1051919_-	hypothetical protein	NA	NA	NA	NA	NA
AYT20846.1|1052231_1052510_-	hypothetical protein	NA	S4TNM0	Salmonella_phage	92.3	2.4e-26
AYT20847.1|1052935_1055548_+	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	22.6	1.1e-19
AYT20848.1|1055755_1056766_+	dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
AYT20849.1|1056928_1057474_+	hypothetical protein	NA	NA	NA	NA	NA
AYT20850.1|1057470_1058580_-	MOSC domain-containing protein	NA	NA	NA	NA	NA
AYT20851.1|1058678_1060787_+	23S rRNA m(2)G2445 methyltransferase	NA	W6LLI2	Streptococcus_phage	29.6	5.1e-20
AYT20852.1|1060799_1062707_+	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	29.8	2.4e-53
1060911:1060930	attR	AACGGCGCCGGGAAATCCAC	NA	NA	NA	NA
AYT20853.1|1062721_1063975_+	inner membrane protein	NA	NA	NA	NA	NA
AYT20854.1|1063979_1065620_+	paraquat-inducible protein B	NA	NA	NA	NA	NA
AYT20855.1|1065616_1066180_+	lipoprotein	NA	NA	NA	NA	NA
AYT20856.1|1066433_1066601_+	ribosome modulation factor	NA	NA	NA	NA	NA
AYT20857.1|1066700_1067219_-	D-3-hydroxydecanoyl-(acyl carrier-protein) dehydratase	NA	NA	NA	NA	NA
AYT20858.1|1067287_1069048_-|protease	ATP-dependent protease	protease	NA	NA	NA	NA
AYT20859.1|1069233_1069686_+	Ter macrodomain organizer matS-binding protein	NA	NA	NA	NA	NA
AYT20860.1|1069757_1070810_-	outer membrane protein A	NA	NA	NA	NA	NA
AYT20861.1|1071164_1071674_-	cell division inhibitor	NA	NA	NA	NA	NA
AYT20862.1|1071890_1072496_+	competence-specific transcriptional regulator TfoX	NA	NA	NA	NA	NA
AYT20863.1|1072482_1074636_-	inner membrane protein	NA	NA	NA	NA	NA
AYT20864.1|1074654_1075101_-	hypothetical protein	NA	NA	NA	NA	NA
AYT20865.1|1075224_1077279_+	helicase IV	NA	A7KV33	Bacillus_phage	27.6	6.5e-20
AYT20866.1|1077314_1077773_-	methylglyoxal synthase	NA	NA	NA	NA	NA
AYT20867.1|1077867_1078530_-	hypothetical protein	NA	NA	NA	NA	NA
AYT20868.1|1078700_1079117_+	hypothetical protein	NA	NA	NA	NA	NA
AYT20869.1|1079161_1079479_-	heat shock protein HspQ	NA	NA	NA	NA	NA
AYT20870.1|1079536_1080748_-	23S rRNA m(5)C1962 methyltransferase	NA	NA	NA	NA	NA
AYT20871.1|1081879_1082338_+|transposase	insertion sequence element IS200 transposase	transposase	NA	NA	NA	NA
AYT20872.1|1083074_1083356_+	acylphosphatase	NA	NA	NA	NA	NA
AYT20873.1|1083352_1083682_-	sulfite reductase	NA	NA	NA	NA	NA
AYT20874.1|1083768_1084428_-	hypothetical protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	52.4	2.7e-44
AYT20875.1|1085091_1085550_+|transposase	insertion sequence element IS200 transposase	transposase	NA	NA	NA	NA
>prophage 3
CP029882	Salmonella enterica subsp. enterica serovar Typhi strain 343076_248190 chromosome, complete genome	4773823	1530475	1604469	4773823	head,tail,transposase,plate,tRNA,protease	Burkholderia_virus(43.24%)	80	NA	NA
AYT21275.1|1530475_1530934_-|transposase	insertion sequence element IS200 transposase	transposase	NA	NA	NA	NA
AYT21276.1|1531436_1531718_+	stress response protein	NA	NA	NA	NA	NA
AYT21277.1|1531986_1532808_+|protease	serine protease	protease	NA	NA	NA	NA
AYT21278.1|1532842_1533172_-	multidrug efflux system protein MdtI	NA	NA	NA	NA	NA
AYT21279.1|1533158_1533521_-	multidrug efflux system protein MdtJ	NA	NA	NA	NA	NA
AYT21280.1|1533632_1533803_-	hypothetical protein	NA	NA	NA	NA	NA
AYT21281.1|1533937_1534972_+	hypothetical protein	NA	NA	NA	NA	NA
AYT21282.1|1535146_1536535_-	pyridine nucleotide transhydrogenase subunit beta	NA	NA	NA	NA	NA
AYT21283.1|1536545_1538075_-	pyridine nucleotide transhydrogenase subunit alpha	NA	NA	NA	NA	NA
AYT21284.1|1538601_1539546_+	hypothetical protein	NA	NA	NA	NA	NA
AYT21285.1|1539727_1540117_-	bacteriophage transcriptional regulator	NA	Q6QIE8	Burkholderia_phage	54.2	4.5e-31
AYT21286.1|1540088_1540541_-	hypothetical protein	NA	A4JWM5	Burkholderia_virus	46.6	1.2e-24
AYT21287.1|1540735_1540966_-	hypothetical protein	NA	NA	NA	NA	NA
AYT21288.1|1540962_1541646_-	hypothetical protein	NA	A0A2P9JZH4	Alteromonadaceae_phage	37.3	2.6e-34
AYT21289.1|1541642_1541858_-	hypothetical protein	NA	NA	NA	NA	NA
AYT21290.1|1541850_1542234_-	hypothetical protein	NA	K7PJQ4	Enterobacteria_phage	58.9	2.3e-27
AYT21291.1|1542230_1542533_-	hypothetical protein	NA	NA	NA	NA	NA
AYT21292.1|1542542_1542815_-	hypothetical protein	NA	NA	NA	NA	NA
AYT21293.1|1543103_1543634_-	bacteriophage host-nuclease inhibitor protein	NA	L7P7T1	Pseudomonas_phage	66.1	3.4e-58
AYT21294.1|1543661_1543931_-	hypothetical protein	NA	NA	NA	NA	NA
AYT21295.1|1543933_1545100_-	ExeA protein	NA	A4JWN1	Burkholderia_virus	59.7	3.3e-122
AYT21296.1|1545110_1546880_-	hypothetical protein	NA	Q6QIE0	Burkholderia_phage	68.5	2.8e-229
AYT21297.1|1547057_1547489_-	hypothetical protein	NA	A4JWN3	Burkholderia_virus	57.3	4.5e-32
AYT21298.1|1547484_1548477_+	nucleoid-associated protein	NA	A0A291AUQ0	Sinorhizobium_phage	37.3	3.0e-55
AYT21299.1|1548720_1549071_+	hypothetical protein	NA	A4JWP3	Burkholderia_virus	53.0	4.5e-22
AYT21300.1|1549785_1550436_+	lipoprotein	NA	Q5ZQY9	Pseudomonas_phage	32.9	8.1e-09
AYT21301.1|1550432_1550759_+	hypothetical protein	NA	Q6QIC4	Burkholderia_phage	49.5	9.6e-19
AYT21302.1|1550758_1551070_+	hypothetical protein	NA	A0A0S4L0A3	Pseudomonas_phage	62.6	9.4e-32
AYT21303.1|1551069_1551615_+	hypothetical protein	NA	A4JWJ3	Burkholderia_virus	67.6	9.3e-59
AYT21304.1|1551611_1553207_+	hypothetical protein	NA	A4JWJ4	Burkholderia_virus	62.6	9.3e-184
AYT21305.1|1553206_1554703_+	hypothetical protein	NA	A4JWJ5	Burkholderia_virus	59.6	8.0e-169
AYT21306.1|1554683_1555505_+|head	phage head morphogenesis protein	head	A4JWJ6	Burkholderia_virus	61.2	5.3e-98
AYT21307.1|1555507_1555966_+	bacteriophage protein	NA	Q6QIB8	Burkholderia_phage	44.8	1.5e-30
AYT21308.1|1556180_1557296_+	hypothetical protein	NA	A4JWJ9	Burkholderia_virus	51.1	7.9e-97
AYT21309.1|1557310_1558264_+	hypothetical protein	NA	A4JWK0	Burkholderia_virus	44.5	5.2e-65
AYT21310.1|1558273_1558612_+	hypothetical protein	NA	NA	NA	NA	NA
AYT21311.1|1558613_1559060_+	hypothetical protein	NA	A4JWK2	Burkholderia_virus	52.3	2.2e-34
AYT21312.1|1559059_1559524_+	hypothetical protein	NA	Q6QIB2	Burkholderia_phage	51.7	9.1e-39
AYT21313.1|1559520_1559775_+	hypothetical protein	NA	NA	NA	NA	NA
AYT21314.1|1559764_1561192_+|tail	bacteriophage tail sheath protein	tail	A4JWK5	Burkholderia_virus	77.4	3.7e-216
AYT21315.1|1561191_1561713_+|tail	tail core protein	tail	A4JWK6	Burkholderia_virus	68.2	8.0e-68
AYT21316.1|1561715_1561997_+	hypothetical protein	NA	NA	NA	NA	NA
AYT21317.1|1562094_1562430_+	hypothetical protein	NA	NA	NA	NA	NA
AYT21318.1|1562606_1565072_+	bacteriophage protein	NA	A4JWL0	Burkholderia_virus	42.6	2.2e-168
AYT21319.1|1565071_1565956_+	hypothetical protein	NA	A4JWL1	Burkholderia_virus	47.0	7.5e-50
AYT21320.1|1565952_1566168_+|tail	bacteriophage tail fiber protein	tail	Q6QIA3	Burkholderia_phage	60.0	2.4e-18
AYT21321.1|1566155_1567310_+	bacteriophage regulatory protein	NA	Q6QIA2	Burkholderia_phage	47.1	4.7e-84
AYT21322.1|1567306_1567834_+|plate	bacteriophage baseplate protein	plate	Q6QIA1	Burkholderia_phage	46.5	1.5e-21
AYT21323.1|1567890_1568238_+|plate	bacteriophage baseplate protein	plate	Q6QIA0	Burkholderia_phage	60.6	8.6e-34
AYT21324.1|1568228_1569332_+|plate	bacteriophage baseplate assembly protein	plate	Q6QI99	Burkholderia_phage	54.3	5.4e-106
AYT21325.1|1569324_1569903_+|tail	bacteriophage tail fiber protein	tail	A4JWL7	Burkholderia_virus	65.8	6.4e-66
AYT21326.1|1570720_1570930_+|tail	phage tail protein	tail	NA	NA	NA	NA
AYT21327.1|1571423_1572041_-|tail	bacteriophage tail fiber assembly protein	tail	Q9MCR5	Enterobacteria_phage	59.9	5.8e-65
AYT21328.1|1573571_1574144_+	DNA-invertase	NA	A0A0A7NPV4	Enterobacteria_phage	84.7	8.8e-84
AYT21329.1|1574424_1575807_+	amino acid permease	NA	NA	NA	NA	NA
AYT21330.1|1575868_1576204_-	hypothetical protein	NA	NA	NA	NA	NA
AYT21331.1|1576330_1577062_+	two-component response regulator	NA	NA	NA	NA	NA
AYT21332.1|1577542_1578694_+	outer membrane protein	NA	Q1MVN1	Enterobacteria_phage	59.1	3.2e-117
AYT21333.1|1578846_1580553_+	metal-dependent hydrolase	NA	NA	NA	NA	NA
AYT21334.1|1580660_1581965_+	two component sensor kinase	NA	W8CYF6	Bacillus_phage	22.7	5.7e-14
AYT21335.1|1582040_1582970_+	DNA sequence-specific contrahelicase	NA	NA	NA	NA	NA
AYT21336.1|1582966_1584370_-	fumarate hydratase class II	NA	NA	NA	NA	NA
AYT21337.1|1584537_1586184_-	Fumarate hydratase class I	NA	NA	NA	NA	NA
AYT21338.1|1586383_1587559_+	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
AYT21339.1|1587661_1589170_+	hypothetical protein	NA	NA	NA	NA	NA
AYT21340.1|1589875_1590877_+	adenosine deaminase	NA	NA	NA	NA	NA
AYT21341.1|1590950_1592066_-	oxidoreductase	NA	NA	NA	NA	NA
AYT21342.1|1592168_1592324_+	hypothetical protein	NA	NA	NA	NA	NA
AYT21343.1|1592622_1592838_+	oriC-binding nucleoid-associated protein	NA	NA	NA	NA	NA
AYT21344.1|1592926_1593367_+	hypothetical protein	NA	NA	NA	NA	NA
AYT21345.1|1593443_1594025_+	Na(+)-translocating NADH-quinone reductase subunit E	NA	NA	NA	NA	NA
AYT21346.1|1594024_1594603_+	ferredoxin-like protein	NA	NA	NA	NA	NA
AYT21347.1|1594595_1596617_+	NADH reducing dehydrogenase	NA	NA	NA	NA	NA
AYT21348.1|1596617_1597676_+	electron transport complex protein RnfD	NA	NA	NA	NA	NA
AYT21349.1|1597679_1598300_+	electron transport complex protein RnfG	NA	NA	NA	NA	NA
AYT21350.1|1598302_1598995_+	electron transport complex protein RsxE	NA	NA	NA	NA	NA
AYT21351.1|1598994_1599630_+	endonuclease III	NA	NA	NA	NA	NA
AYT21352.1|1600230_1601736_+	proton/oligopeptide symporter	NA	NA	NA	NA	NA
AYT21353.1|1601840_1602446_+	glutathione S-transferase	NA	NA	NA	NA	NA
AYT21354.1|1603194_1604469_-|tRNA	tyrosyl-tRNA synthetase	tRNA	K4F5T3	Cronobacter_phage	42.1	1.6e-85
>prophage 4
CP029882	Salmonella enterica subsp. enterica serovar Typhi strain 343076_248190 chromosome, complete genome	4773823	1785514	1789926	4773823		Escherichia_phage(50.0%)	6	NA	NA
AYT21538.1|1785514_1785754_+	virulence protein	NA	K7P6H1	Enterobacteria_phage	88.6	8.5e-33
AYT21539.1|1786626_1787436_+	toxin-like protein	NA	A5LH53	Enterobacteria_phage	50.0	2.1e-62
AYT21540.1|1787508_1787886_+	hypothetical protein	NA	I1TQ41	Pseudomonas_phage	38.4	2.2e-14
AYT21541.1|1788033_1788576_-	hypothetical protein	NA	A0A0U2S643	Escherichia_phage	67.0	6.2e-71
AYT21542.1|1788767_1789496_-	pertussis toxin subunit ArtA	NA	A0A0U2KD26	Escherichia_phage	53.3	4.9e-63
AYT21543.1|1789512_1789926_-	pertussis-like toxin subunit	NA	A0A0U2KD34	Escherichia_phage	38.6	1.4e-19
>prophage 5
CP029882	Salmonella enterica subsp. enterica serovar Typhi strain 343076_248190 chromosome, complete genome	4773823	2085464	2095971	4773823		Enterobacteria_phage(37.5%)	10	NA	NA
AYT21816.1|2085464_2086778_-	dehydratase RfbH	NA	H8ZJ36	Ostreococcus_tauri_virus	35.1	7.0e-52
AYT21817.1|2086804_2087884_-	CDP-glucose 4,6-dehydratase	NA	A0A222YY99	Synechococcus_phage	24.1	1.3e-16
AYT21818.1|2087888_2088662_-	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
AYT21819.1|2088677_2089652_-	reductase RfbI	NA	NA	NA	NA	NA
AYT21820.1|2089657_2090209_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	58.6	7.7e-53
AYT21821.1|2090209_2091088_-	TDP-glucose pyrophosphorylase	NA	I7I009	Enterobacteria_phage	64.8	2.3e-107
AYT21822.1|2091135_2092035_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	36.3	7.9e-31
AYT21823.1|2092034_2093120_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	53.9	1.6e-102
AYT21824.1|2093496_2094390_-	UTP-glucose-1-phosphate uridylyltransferase	NA	A0A127AW70	Bacillus_phage	42.2	4.8e-44
AYT21825.1|2094567_2095971_-	colanic acid biosynthesis protein WcaM	NA	A0A291LBB9	Klebsiella_phage	26.5	1.1e-21
>prophage 6
CP029882	Salmonella enterica subsp. enterica serovar Typhi strain 343076_248190 chromosome, complete genome	4773823	2171864	2181032	4773823	tRNA	Enterobacteria_phage(66.67%)	10	NA	NA
AYT21888.1|2171864_2173898_+|tRNA	methionyl-tRNA synthetase	tRNA	A0A1V0SDF2	Indivirus	26.9	6.1e-55
AYT21889.1|2174138_2174597_+	lipoprotein	NA	Q9EYF5	Enterobacteria_phage	72.5	8.4e-53
AYT21890.1|2174768_2175299_+	lipoprotein	NA	NA	NA	NA	NA
AYT21891.1|2175355_2175823_-	hypothetical protein	NA	Q9EYF4	Enterobacteria_phage	90.3	3.9e-74
AYT21892.1|2175869_2176589_-	two-component system response regulator	NA	NA	NA	NA	NA
AYT21893.1|2176585_2178268_-	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	89.7	4.3e-272
AYT21894.1|2178490_2179222_+	transcriptional regulator	NA	Q9EYF2	Enterobacteria_phage	87.9	4.5e-101
AYT21895.1|2179281_2179389_+	hypothetical protein	NA	NA	NA	NA	NA
AYT21896.1|2179369_2180101_-	ABC transporter permease	NA	NA	NA	NA	NA
AYT21897.1|2180084_2181032_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.2	1.7e-23
>prophage 7
CP029882	Salmonella enterica subsp. enterica serovar Typhi strain 343076_248190 chromosome, complete genome	4773823	2716468	2729860	4773823	tail	Salmonella_phage(70.0%)	11	NA	NA
AYT22326.1|2716468_2716687_-	hypothetical protein	NA	Q53ZE7	Salmonella_virus	71.9	1.9e-18
AYT22327.1|2716777_2717878_-	hypothetical protein	NA	A0A1S6KZZ5	Salmonella_phage	88.3	1.0e-176
AYT22328.1|2717874_2718360_-|tail	bacteriophage tail protein	tail	E5G6Q2	Salmonella_phage	80.0	2.4e-66
AYT22329.1|2718356_2721434_-|tail	bacteriophage tail protein	tail	E5G6Q1	Salmonella_phage	63.1	0.0e+00
AYT22330.1|2721426_2721546_-	hypothetical protein	NA	E5G6Q0	Salmonella_phage	87.2	2.8e-13
AYT22331.1|2721560_2721863_-|tail	phage tail protein	tail	A0A1S6KZZ9	Salmonella_phage	89.0	7.0e-40
AYT22332.1|2721917_2722433_-|tail	major tail tube protein	tail	A0A1S6L002	Salmonella_phage	95.9	5.6e-90
AYT22333.1|2722442_2723615_-|tail	bacteriophage major tail sheath protein	tail	A0A1S6KZY7	Salmonella_phage	90.3	3.5e-204
AYT22334.1|2723757_2724330_-	DNA-invertase	NA	A0A0F7LA37	Escherichia_phage	86.3	1.4e-86
AYT22335.1|2725007_2726123_+	glycosyltransferase	NA	NA	NA	NA	NA
AYT22336.1|2726203_2729860_+	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	28.6	1.0e-44
>prophage 8
CP029882	Salmonella enterica subsp. enterica serovar Typhi strain 343076_248190 chromosome, complete genome	4773823	3060778	3104481	4773823	bacteriocin,protease,tRNA,transposase	Bacillus_virus(33.33%)	44	NA	NA
AYT22641.1|3060778_3061237_-|transposase	insertion sequence element IS200 transposase	transposase	NA	NA	NA	NA
AYT22642.1|3061426_3062506_-	fructose 1,6-bisphosphate aldolase	NA	NA	NA	NA	NA
AYT22643.1|3062607_3063771_-	phosphoglycerate kinase	NA	NA	NA	NA	NA
AYT22644.1|3063792_3064839_-	D-erythrose 4-phosphate dehydrogenase	NA	NA	NA	NA	NA
AYT22645.1|3065212_3065638_+	hypothetical protein	NA	NA	NA	NA	NA
AYT22646.1|3065663_3066242_+	hypothetical protein	NA	NA	NA	NA	NA
AYT22647.1|3066275_3066950_+	hypothetical protein	NA	NA	NA	NA	NA
AYT22648.1|3066931_3067615_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
AYT22649.1|3067608_3068265_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	28.6	1.6e-09
AYT22650.1|3068369_3068828_-|transposase	insertion sequence element IS200 transposase	transposase	NA	NA	NA	NA
AYT22651.1|3069016_3071008_-	transketolase	NA	NA	NA	NA	NA
AYT22652.1|3071283_3072042_+|protease	metalloprotease	protease	NA	NA	NA	NA
AYT22653.1|3072142_3073063_-	agmatine ureohydrolase	NA	NA	NA	NA	NA
AYT22654.1|3073290_3075267_-	biosynthetic arginine decarboxylase	NA	NA	NA	NA	NA
AYT22655.1|3075275_3075407_-	hypothetical protein	NA	NA	NA	NA	NA
AYT22656.1|3075701_3076001_-	membrane protein	NA	NA	NA	NA	NA
AYT22657.1|3076056_3077211_+	S-adenosylmethionine synthetase	NA	A0A2H4PQS6	Staphylococcus_phage	63.9	1.5e-130
AYT22658.1|3077703_3079098_+	galactose-proton symport	NA	NA	NA	NA	NA
AYT22659.1|3079176_3079674_+	hypothetical protein	NA	NA	NA	NA	NA
AYT22660.1|3079769_3080477_+	endonuclease I	NA	NA	NA	NA	NA
AYT22661.1|3080553_3081285_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
AYT22662.1|3081304_3082252_+	glutathione synthetase	NA	NA	NA	NA	NA
AYT22663.1|3082467_3083031_+	hypothetical protein	NA	NA	NA	NA	NA
AYT22664.1|3083030_3083447_+	Holliday junction resolvase	NA	NA	NA	NA	NA
AYT22665.1|3083493_3084180_-	global regulatory protein	NA	NA	NA	NA	NA
AYT22666.1|3084309_3085290_-	type II secretion system ATP-binding protein	NA	NA	NA	NA	NA
AYT22667.1|3085307_3086012_+	hypothetical protein	NA	NA	NA	NA	NA
AYT22668.1|3086030_3086597_+	hypothetical protein	NA	NA	NA	NA	NA
AYT22669.1|3086593_3086884_+	hypothetical protein	NA	NA	NA	NA	NA
AYT22670.1|3086891_3087485_+	dITP/XTP pyrophosphatase	NA	NA	NA	NA	NA
AYT22671.1|3087477_3088614_+	oxygen-independent coproporphyrinogen III oxidase	NA	NA	NA	NA	NA
AYT22672.1|3088704_3089712_-	hypothetical protein	NA	NA	NA	NA	NA
AYT22673.1|3089844_3090891_-	L-asparaginase	NA	NA	NA	NA	NA
AYT22674.1|3091209_3091668_+|transposase	insertion sequence element IS200 transposase	transposase	NA	NA	NA	NA
AYT22675.1|3091790_3092510_-	hypothetical protein	NA	NA	NA	NA	NA
AYT22676.1|3092559_3092886_-	hypothetical protein	NA	NA	NA	NA	NA
AYT22677.1|3092885_3093605_-|tRNA	tRNA m(7)G46 methyltransferase	tRNA	NA	NA	NA	NA
AYT22678.1|3093759_3094812_+	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
AYT22679.1|3094839_3095115_+	oxidative damage protection protein	NA	NA	NA	NA	NA
AYT22680.1|3095227_3096313_+	membrane-bound lytic murein transglycosylase C	NA	A0A0H3V0Q1	Geobacillus_virus	39.0	5.8e-12
AYT22681.1|3096529_3097786_+	nucleoside permease	NA	NA	NA	NA	NA
AYT22682.1|3100396_3101104_+	hypothetical protein	NA	NA	NA	NA	NA
AYT22683.1|3103693_3103960_+|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
AYT22684.1|3104202_3104481_+|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
>prophage 9
CP029882	Salmonella enterica subsp. enterica serovar Typhi strain 343076_248190 chromosome, complete genome	4773823	3479436	3517494	4773823	tail,terminase,transposase,portal,integrase,capsid,plate	Salmonella_phage(82.05%)	46	3474400:3474414	3486566:3486580
3474400:3474414	attL	CGAATTTCTTTTTCA	NA	NA	NA	NA
AYT23012.1|3479436_3481083_-	acetolactate synthase large subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	31.5	9.0e-65
AYT23013.1|3481222_3481321_-	ilvGMEDA operon attenuator peptide	NA	NA	NA	NA	NA
AYT23014.1|3481576_3481906_+	hypothetical protein	NA	NA	NA	NA	NA
AYT23015.1|3481946_3482999_-|integrase	bacteriophage integrase	integrase	A0A218M4I3	Erwinia_phage	57.3	3.6e-107
AYT23016.1|3483394_3483964_-	repressor protein	NA	A0A1S6KZZ7	Salmonella_phage	43.4	2.5e-38
AYT23017.1|3484089_3484311_+	hypothetical protein	NA	NA	NA	NA	NA
AYT23018.1|3484343_3484853_+	regulatory protein cII	NA	E5G6L3	Salmonella_phage	98.8	5.8e-87
AYT23019.1|3485027_3485252_+	hypothetical protein	NA	NA	NA	NA	NA
AYT23020.1|3485274_3485616_+	hypothetical protein	NA	E5G6L5	Salmonella_phage	98.2	1.7e-55
AYT23021.1|3485683_3485917_+	hypothetical protein	NA	E5G6L6	Salmonella_phage	94.8	2.0e-31
AYT23022.1|3485916_3486144_+	hypothetical protein	NA	E5G6L7	Salmonella_phage	100.0	2.7e-36
AYT23023.1|3486140_3486998_+	DNA adenine methylase	NA	E5G6L8	Salmonella_phage	97.2	3.5e-161
3486566:3486580	attR	TGAAAAAGAAATTCG	NA	NA	NA	NA
AYT23024.1|3486994_3489409_+	endonuclease	NA	E5G6L9	Salmonella_phage	97.5	0.0e+00
AYT23025.1|3489562_3489751_+	hypothetical protein	NA	E5G6M0	Salmonella_phage	95.2	7.9e-26
AYT23026.1|3491718_3492633_+	hypothetical protein	NA	NA	NA	NA	NA
AYT23027.1|3492629_3493370_+	hypothetical protein	NA	NA	NA	NA	NA
AYT23028.1|3493404_3494442_-|capsid,portal	capsid portal protein	capsid,portal	A0A1S6KZW5	Salmonella_phage	89.5	1.3e-173
AYT23029.1|3494441_3496208_-|terminase	terminase subunit	terminase	A0A1S6KZW3	Salmonella_phage	99.5	0.0e+00
AYT23030.1|3496350_3497184_+|capsid	capsid scaffolding protein	capsid	A0A1S6KZW9	Salmonella_phage	90.6	1.5e-121
AYT23031.1|3497200_3498259_+|capsid	major capsid protein	capsid	E5G6M6	Salmonella_phage	93.1	1.4e-180
AYT23032.1|3498262_3498913_+|terminase	terminase endonuclease subunit	terminase	E5G6M7	Salmonella_phage	96.3	8.7e-112
AYT23033.1|3498945_3499473_+|capsid	capsid completion protein	capsid	A0A1S6KZW8	Salmonella_phage	89.0	2.1e-76
AYT23034.1|3499472_3499676_+|tail	phage tail protein	tail	E5G6M9	Salmonella_phage	92.5	1.4e-31
AYT23035.1|3499679_3499895_+	hypothetical protein	NA	E5G6N0	Salmonella_phage	80.3	1.8e-26
AYT23036.1|3499914_3500388_+	lysozyme	NA	E5G6N1	Salmonella_phage	91.0	3.7e-80
AYT23037.1|3500389_3500767_+	hypothetical protein	NA	A0A1S6KZZ2	Salmonella_phage	40.0	2.3e-16
AYT23038.1|3500763_3501192_+	regulatory protein	NA	E5G6N2	Salmonella_phage	77.3	2.2e-47
AYT23039.1|3501287_3501719_+|tail	phage tail protein	tail	E5G6N3	Salmonella_phage	95.1	1.5e-72
AYT23040.1|3501711_3502158_+|tail	phage tail completion protein	tail	A0A1S6L001	Salmonella_phage	85.6	6.6e-63
AYT23041.1|3502226_3502805_+|plate	phage baseplate assembly protein	plate	A0A1S6KZX7	Salmonella_phage	86.5	5.5e-94
AYT23042.1|3502801_3503161_+|plate	phage baseplate assembly protein	plate	A0A1S6KZZ4	Salmonella_phage	84.9	6.1e-51
AYT23043.1|3503147_3504056_+|plate	phage baseplate assembly protein	plate	A0A1S6KZY6	Salmonella_phage	89.7	1.3e-142
AYT23044.1|3504048_3504654_+|tail	phage tail protein	tail	A0A1S6L000	Salmonella_phage	92.0	2.0e-110
AYT23045.1|3504650_3506165_+|tail	variable tail fiber protein	tail	M1TAS6	Escherichia_phage	73.2	6.8e-200
AYT23046.1|3506164_3506758_+|tail	tail fiber assembly protein	tail	M1SV83	Escherichia_phage	64.3	9.2e-60
AYT23047.1|3506729_3507170_-|tail	tail fiber assembly protein	tail	A0A0F7LDZ0	Escherichia_phage	68.0	3.1e-52
AYT23048.1|3507592_3508165_+	DNA-invertase	NA	A0A0F7LA37	Escherichia_phage	86.3	1.4e-86
AYT23049.1|3508307_3509480_+|tail	bacteriophage major tail sheath protein	tail	A0A1S6KZY7	Salmonella_phage	90.3	3.5e-204
AYT23050.1|3509489_3510005_+|tail	major tail tube protein	tail	A0A1S6L002	Salmonella_phage	95.9	5.6e-90
AYT23051.1|3510059_3510362_+|tail	phage tail protein	tail	A0A1S6KZZ9	Salmonella_phage	89.0	7.0e-40
AYT23052.1|3510376_3510496_+	bacteriophage protein	NA	E5G6Q0	Salmonella_phage	87.2	2.8e-13
AYT23053.1|3510488_3513566_+|tail	bacteriophage tail protein	tail	E5G6Q1	Salmonella_phage	63.1	0.0e+00
AYT23054.1|3513562_3514048_+|tail	bacteriophage tail protein	tail	E5G6Q2	Salmonella_phage	80.0	2.4e-66
AYT23055.1|3514044_3515145_+	hypothetical protein	NA	A0A1S6KZZ5	Salmonella_phage	88.3	1.0e-176
AYT23056.1|3515235_3515454_+	hypothetical protein	NA	Q53ZE7	Salmonella_virus	69.0	7.5e-20
AYT23057.1|3517035_3517494_+|transposase	insertion sequence element IS200 transposase	transposase	NA	NA	NA	NA
>prophage 10
CP029882	Salmonella enterica subsp. enterica serovar Typhi strain 343076_248190 chromosome, complete genome	4773823	4432808	4506985	4773823	tail,terminase,portal,integrase,capsid,plate	Salmonella_phage(82.61%)	75	4494322:4494338	4507144:4507160
AYT23834.1|4432808_4434758_+	hypothetical protein	NA	A0A2K9V411	Faecalibacterium_phage	38.3	5.9e-31
AYT23835.1|4434829_4435738_+	hypothetical protein	NA	NA	NA	NA	NA
AYT23836.1|4435811_4436711_+	hypothetical protein	NA	NA	NA	NA	NA
AYT23837.1|4436752_4437112_+	hypothetical protein	NA	NA	NA	NA	NA
AYT23838.1|4437211_4437481_-	hypothetical protein	NA	NA	NA	NA	NA
AYT23839.1|4437612_4438887_-	UV protection protein	NA	F1C5A5	Cronobacter_phage	62.0	7.5e-152
AYT23840.1|4439106_4439484_+	hypothetical protein	NA	NA	NA	NA	NA
AYT23841.1|4439570_4439789_-	hypothetical protein	NA	E5G6Q4	Salmonella_phage	75.0	4.9e-27
AYT23842.1|4439856_4440957_-	hypothetical protein	NA	E5G6Q3	Salmonella_phage	92.1	7.9e-190
AYT23843.1|4440953_4441439_-|tail	phage tail protein	tail	E5G6Q2	Salmonella_phage	93.2	9.4e-71
AYT23844.1|4441438_4444219_-	hypothetical protein	NA	A0A2H4JGB2	uncultured_Caudovirales_phage	41.1	3.5e-125
AYT23845.1|4444211_4444331_-	bacteriophage protein	NA	E5G6Q0	Salmonella_phage	94.9	1.2e-14
AYT23846.1|4444345_4444648_-|tail	phage tail protein	tail	E5G6P9	Salmonella_phage	93.9	3.3e-42
AYT23847.1|4444702_4445218_-|tail	major tail tube protein	tail	E5G6P8	Salmonella_phage	99.4	2.7e-92
AYT23848.1|4445227_4446400_-|tail	major tail sheath protein	tail	A0A1S6KZY7	Salmonella_phage	99.5	9.8e-223
AYT23849.1|4446934_4447657_+	invasion-associated secreted protein	NA	NA	NA	NA	NA
AYT23850.1|4447854_4448262_-|tail	phage tail fiber protein	tail	A0A1B0V844	Salmonella_phage	84.2	4.1e-59
AYT23851.1|4448268_4449888_-|tail	phage tail fiber protein	tail	E5G6P0	Salmonella_phage	90.9	2.7e-154
AYT23852.1|4449884_4450490_-|tail	phage tail protein	tail	A0A1S6L000	Salmonella_phage	92.0	2.0e-110
AYT23853.1|4450482_4451391_-|plate	phage baseplate assembly protein	plate	E5G6N8	Salmonella_phage	97.0	5.2e-155
AYT23854.1|4451377_4451737_-|plate	phage baseplate assembly protein	plate	A0A1S6KZZ4	Salmonella_phage	96.6	6.8e-58
AYT23855.1|4451733_4452312_-|plate	phage baseplate assembly protein	plate	E5G6N6	Salmonella_phage	99.5	3.9e-108
AYT23856.1|4452380_4452827_-|tail	phage tail protein	tail	A0A1S6L001	Salmonella_phage	90.4	2.2e-66
AYT23857.1|4452819_4453251_-|tail	phage tail protein	tail	A0A1S6KZY0	Salmonella_phage	99.3	1.1e-75
AYT23858.1|4453346_4453772_-	regulatory protein	NA	A0A1S6KZX8	Salmonella_phage	97.9	2.5e-67
AYT23859.1|4453771_4454149_-	hypothetical protein	NA	A0A1S6KZZ2	Salmonella_phage	99.2	1.5e-60
AYT23860.1|4454153_4454624_-	lysozyme	NA	A0A1S6KZY9	Salmonella_phage	97.4	1.0e-85
AYT23861.1|4454643_4454859_-	hypothetical protein	NA	E5G6N0	Salmonella_phage	98.6	3.8e-32
AYT23862.1|4454862_4455066_-|tail	phage tail protein	tail	E5G6M9	Salmonella_phage	100.0	3.8e-34
AYT23863.1|4455065_4455530_-|capsid	capsid completion protein	capsid	A0A1S6KZW8	Salmonella_phage	98.1	2.4e-84
AYT23864.1|4455623_4456274_-|terminase	phage terminase	terminase	E5G6M7	Salmonella_phage	99.5	2.4e-114
AYT23865.1|4456277_4457342_-|capsid	major capsid protein	capsid	A0A1S6KZZ3	Salmonella_phage	98.3	1.3e-194
AYT23866.1|4457358_4458192_-|capsid	capsid scaffolding protein	capsid	E5G6M5	Salmonella_phage	87.4	6.1e-126
AYT23867.1|4458334_4460101_+|terminase	terminase subunit	terminase	A0A1S6KZW3	Salmonella_phage	96.4	0.0e+00
AYT23868.1|4460097_4461144_+|capsid,portal	capsid portal protein	capsid,portal	A0A1S6KZW5	Salmonella_phage	86.6	2.1e-176
AYT23869.1|4461192_4461888_-	hypothetical protein	NA	NA	NA	NA	NA
AYT23870.1|4461907_4462972_-	hypothetical protein	NA	NA	NA	NA	NA
AYT23871.1|4462968_4464033_-	hypothetical protein	NA	NA	NA	NA	NA
AYT23872.1|4464957_4467366_-	replication endonuclease	NA	A0A1S6L028	Salmonella_phage	95.1	0.0e+00
AYT23873.1|4467356_4468217_-	DNA adenine methylase	NA	E5G6L8	Salmonella_phage	81.8	3.4e-132
AYT23874.1|4468213_4468798_-	exonuclease	NA	A0A1S6L012	Salmonella_phage	73.7	1.1e-76
AYT23875.1|4468794_4469022_-	hypothetical protein	NA	A0A1S6L007	Salmonella_phage	94.7	1.0e-35
AYT23876.1|4469021_4469255_-	hypothetical protein	NA	A0A1S6L021	Salmonella_phage	84.4	9.8e-26
AYT23877.1|4469322_4469664_-	hypothetical protein	NA	A0A1S6L019	Salmonella_phage	99.1	4.6e-56
AYT23878.1|4469627_4469828_-	hypothetical protein	NA	A0A1S6L005	Salmonella_phage	97.0	4.6e-32
AYT23879.1|4469835_4470345_-	phage regulatory protein	NA	A0A1S6L008	Salmonella_phage	94.1	1.3e-83
AYT23880.1|4470377_4470620_-	phage regulatory protein	NA	A0A1S6KZZ6	Salmonella_phage	98.8	2.3e-38
AYT23881.1|4470736_4471369_+	phage repressor protein cI	NA	A0A1S6KZZ7	Salmonella_phage	58.6	1.4e-66
AYT23882.1|4471372_4472398_+|integrase	phage integrase	integrase	A0A1S6L016	Salmonella_phage	98.2	2.7e-200
AYT23883.1|4472504_4472858_-	protein samA'	NA	I6S1S3	Salmonella_phage	59.3	6.7e-10
AYT23884.1|4473474_4473762_+	hypothetical protein	NA	NA	NA	NA	NA
AYT23885.1|4473772_4474663_+	methyltransferase	NA	NA	NA	NA	NA
AYT23886.1|4474662_4475409_+	hypothetical protein	NA	NA	NA	NA	NA
AYT23887.1|4475710_4477681_-	Vi polysaccharide exporter protein	NA	NA	NA	NA	NA
AYT23888.1|4477700_4479005_-	Vi polysaccharide exporter inner-membrane protein	NA	NA	NA	NA	NA
AYT23889.1|4479027_4479723_-	Vi polysaccharide exporter ATP-binding protein	NA	NA	NA	NA	NA
AYT23890.1|4479748_4480543_-	Vi polysaccharide exporter inner-membrane protein	NA	NA	NA	NA	NA
AYT23891.1|4480552_4481620_-	Vi polysaccharide exporter protein	NA	NA	NA	NA	NA
AYT23892.1|4481664_4483401_-	Vi polysaccharide biosynthesis protein TviE	NA	NA	NA	NA	NA
AYT23893.1|4483400_4485896_-	Vi polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
AYT23894.1|4485919_4486966_-	Vi polysaccharide biosynthesis epimerase	NA	A0A2K9L0I7	Tupanvirus	45.0	1.4e-74
AYT23895.1|4486968_4488246_-	Vi polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase	NA	M1HYW7	Paramecium_bursaria_Chlorella_virus	26.7	1.3e-21
AYT23896.1|4488490_4489030_-	Vi polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
AYT23897.1|4489883_4491395_+	DNA helicase	NA	A0A126DN25	Acinetobacter_phage	29.0	2.0e-42
AYT23898.1|4491378_4492968_+	hypothetical protein	NA	NA	NA	NA	NA
AYT23899.1|4493131_4494145_+|integrase	phage integrase	integrase	NA	NA	NA	NA
4494322:4494338	attL	GTGGTGCCCGGACTCGG	NA	NA	NA	NA
AYT23900.1|4494571_4494865_+	hypothetical protein	NA	NA	NA	NA	NA
AYT23901.1|4494861_4495350_+	hypothetical protein	NA	NA	NA	NA	NA
AYT23902.1|4495529_4495982_-	hypothetical protein	NA	NA	NA	NA	NA
AYT23903.1|4501204_4501666_+	hypothetical protein	NA	NA	NA	NA	NA
AYT23904.1|4501662_4501884_+	transcriptional regulator	NA	A0A2I7S995	Vibrio_phage	58.3	4.6e-17
AYT23905.1|4502740_4503523_+	hypothetical protein	NA	NA	NA	NA	NA
AYT23906.1|4504149_4504374_-	hypothetical protein	NA	NA	NA	NA	NA
AYT23907.1|4504503_4505415_-	hypothetical protein	NA	NA	NA	NA	NA
AYT23908.1|4505725_4506985_-|integrase	bacteriophage integrase	integrase	B7SYF8	Stenotrophomonas_phage	41.7	3.2e-78
4507144:4507160	attR	GTGGTGCCCGGACTCGG	NA	NA	NA	NA
