The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP029907	Salmonella enterica subsp. enterica serovar Typhi strain 343077_255118 chromosome, complete genome	4774500	930275	937587	4774500	protease,integrase	Dickeya_phage(16.67%)	6	931526:931540	942705:942719
AYT85709.1|930275_931394_+	hypothetical protein	NA	A0A140XAI1	Dickeya_phage	39.8	8.1e-09
AYT85710.1|931390_933337_+	macrolide transporter ATP-binding protein/permease	NA	G9BWD6	Planktothrix_phage	43.1	2.0e-39
931526:931540	attL	GGAAAATCAACGCTG	NA	NA	NA	NA
AYT85711.1|933466_933688_-	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.2	9.3e-18
AYT85712.1|934011_934332_+|protease	ATP-dependent Clp protease adaptor protein	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	4.5e-13
AYT85713.1|934362_936639_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.2	1.8e-164
AYT85714.1|937209_937587_-|integrase	integrase	integrase	A0A077KET4	Ralstonia_phage	41.0	1.2e-20
942705:942719	attR	CAGCGTTGATTTTCC	NA	NA	NA	NA
>prophage 2
CP029907	Salmonella enterica subsp. enterica serovar Typhi strain 343077_255118 chromosome, complete genome	4774500	1008712	1086025	4774500	transposase,integrase,terminase,protease,tail	Salmonella_phage(73.33%)	93	990791:990810	1061386:1061405
990791:990810	attL	AACGGCGCCGGGAAATCCAC	NA	NA	NA	NA
AYT85764.1|1008712_1010053_-|integrase	integrase	integrase	S4TSP2	Salmonella_phage	99.8	7.9e-261
AYT85765.1|1010049_1010298_-	excisionase	NA	S4TND0	Salmonella_phage	100.0	4.7e-42
AYT85766.1|1010338_1010584_-	bacteriophage protein	NA	S4TR31	Salmonella_phage	96.2	1.3e-36
AYT85767.1|1010583_1011465_-	DNA methylase	NA	A0A0M4R347	Salmonella_phage	93.0	1.2e-153
AYT85768.1|1011461_1012526_-	bacteriophage protein	NA	T1SBJ4	Salmonella_phage	74.6	6.3e-152
AYT85769.1|1012603_1013284_-	exonuclease	NA	A0A0M3ULE0	Salmonella_phage	98.7	1.9e-130
AYT85770.1|1013280_1014066_-	bacteriophage recombination protein	NA	A0A0M4RD39	Salmonella_phage	99.6	9.7e-150
AYT85771.1|1014071_1014368_-	host-nuclease inhibitor protein	NA	A0A0M5M5Z9	Salmonella_phage	96.9	4.4e-47
AYT85772.1|1014458_1014659_-	prophage Kil protein	NA	G8C7T2	Escherichia_phage	48.4	2.4e-12
AYT85773.1|1014947_1015352_-	DNA-binding protein	NA	H6WRX4	Salmonella_phage	99.3	7.1e-72
AYT85774.1|1015683_1016058_+	DNA-binding protein	NA	S4TTD7	Salmonella_phage	99.2	3.9e-64
AYT85775.1|1016142_1017126_+	bacteriophage protein	NA	H6WRX7	Salmonella_phage	99.7	2.1e-162
AYT85776.1|1017128_1017878_+	DNA replication protein	NA	S4TNF5	Salmonella_phage	99.6	3.6e-138
AYT85777.1|1017888_1018236_+	DNA-binding protein	NA	H6WRX9	Salmonella_phage	90.4	4.8e-53
AYT85778.1|1018232_1018757_+	bacteriophage protein	NA	A0A220NQV2	Salmonella_phage	99.4	1.8e-91
AYT85779.1|1018756_1019230_+	methyltransferase	NA	H9C170	Pectobacterium_phage	80.1	1.6e-67
AYT85780.1|1019233_1019806_+	bacteriophage protein	NA	S4TSR6	Salmonella_phage	68.0	1.3e-66
AYT85781.1|1019899_1020166_+	bacteriophage protein	NA	S4TNF2	Salmonella_phage	100.0	1.5e-46
AYT85782.1|1020247_1020409_+	bacteriophage protein	NA	NA	NA	NA	NA
AYT85783.1|1020841_1021339_+	bacteriophage protein	NA	NA	NA	NA	NA
AYT85784.1|1021523_1021763_+	damage-inducible protein	NA	H6WRY5	Salmonella_phage	100.0	3.9e-38
AYT85785.1|1021752_1022058_+	bacteriophage protein	NA	H6WRY6	Salmonella_phage	100.0	9.8e-42
AYT85786.1|1022097_1022700_+	bacteriophage protein	NA	S4TTI0	Salmonella_phage	99.5	7.5e-110
AYT85787.1|1022908_1023520_+	bacteriophage lambda protein NinG	NA	A0A0M4RU10	Salmonella_phage	99.5	2.5e-92
AYT85788.1|1023652_1024450_+	prophage antitermination protein	NA	A0A0M4S661	Salmonella_phage	99.2	3.4e-150
AYT85789.1|1024848_1024974_+	bacteriophage protein	NA	NA	NA	NA	NA
AYT85790.1|1025109_1025559_-	lipoprotein	NA	NA	NA	NA	NA
AYT85791.1|1025775_1026165_+	prophage membrane protein	NA	K7PHB9	Enterobacterial_phage	70.2	3.1e-40
AYT85792.1|1026151_1026433_+	prophage membrane protein	NA	K7PKN9	Enterobacterial_phage	80.6	2.6e-36
AYT85793.1|1026432_1027047_+	bacteriophage protein	NA	Q8HA86	Salmonella_phage	93.1	3.2e-108
AYT85794.1|1027266_1027521_+	hypothetical protein	NA	NA	NA	NA	NA
AYT85795.1|1027625_1028003_+	hypothetical protein	NA	Q6UAR9	Klebsiella_phage	68.5	4.9e-43
AYT85796.1|1028066_1028327_+	hypothetical protein	NA	NA	NA	NA	NA
AYT85797.1|1028416_1029169_+|terminase	prophage terminase small subunit	terminase	A0A0M3ULJ9	Salmonella_phage	56.5	3.4e-11
AYT85798.1|1029134_1030538_+	bacteriophage protein	NA	A0A077KAW0	Edwardsiella_phage	70.1	6.5e-189
AYT85799.1|1030537_1032007_+	hypothetical protein	NA	A0A0M4S6U1	Salmonella_phage	99.2	1.7e-280
AYT85800.1|1032098_1032629_+	hypothetical protein	NA	A0A0M4REK0	Salmonella_phage	87.4	8.7e-86
AYT85801.1|1032643_1033876_+	hypothetical protein	NA	A0A0M4R5A6	Salmonella_phage	99.0	1.4e-227
AYT85802.1|1033880_1034378_+	bacteriophage protein	NA	A0A0M4QWZ6	Salmonella_phage	99.4	8.7e-88
AYT85803.1|1034389_1035331_+	bacteriophage protein	NA	A0A0M3ULD3	Salmonella_phage	100.0	3.1e-179
AYT85804.1|1035372_1035741_+	bacteriophage protein	NA	A0A0M4RTX5	Salmonella_phage	100.0	8.7e-61
AYT85805.1|1035706_1036114_+	bacteriophage protein	NA	A0A0M5M3S2	Salmonella_phage	97.8	7.1e-72
AYT85806.1|1036110_1036665_+	bacteriophage protein	NA	A0A0M4S631	Salmonella_phage	100.0	4.8e-95
AYT85807.1|1036651_1037041_+	bacteriophage protein	NA	A0A0M3ULK0	Salmonella_phage	98.4	6.0e-68
AYT85808.1|1037015_1037579_+	bacteriophage protein	NA	A0A0M4R331	Salmonella_phage	75.3	8.9e-81
AYT85809.1|1037582_1038728_+	bacteriophage protein	NA	A0A2H4J8G4	uncultured_Caudovirales_phage	74.5	2.2e-163
AYT85810.1|1038739_1039180_+	bacteriophage protein	NA	A0A2H4J619	uncultured_Caudovirales_phage	74.7	3.5e-56
AYT85811.1|1039183_1039636_+	bacteriophage protein	NA	A0A0M4S6U8	Salmonella_phage	76.6	1.9e-57
AYT85812.1|1039813_1041766_+	bacteriophage protein	NA	A0A0M4REK7	Salmonella_phage	56.0	1.8e-181
AYT85813.1|1041765_1042416_+	bacteriophage protein	NA	A0A0M3ULD5	Salmonella_phage	60.6	3.0e-56
AYT85814.1|1042419_1042722_+	bacteriophage protein	NA	A0A2H4J495	uncultured_Caudovirales_phage	57.0	2.0e-26
AYT85815.1|1042724_1043756_+	bacteriophage protein	NA	A0A2H4J1B2	uncultured_Caudovirales_phage	51.4	1.2e-96
AYT85816.1|1043752_1044088_+	hypothetical protein	NA	A0A2H4J1A5	uncultured_Caudovirales_phage	52.2	1.1e-20
AYT85817.1|1044282_1045014_+	bacteriophage protein	NA	NA	NA	NA	NA
AYT85818.1|1045013_1045442_+	bacteriophage protein	NA	NA	NA	NA	NA
AYT85819.1|1045500_1046256_+	bacteriophage protein	NA	A0A0M5M1K7	Salmonella_phage	85.3	4.1e-105
AYT85820.1|1046343_1046481_+	bacteriophage protein	NA	A0A0M4S639	Salmonella_phage	100.0	2.0e-18
AYT85821.1|1046496_1046850_+	bacteriophage protein	NA	A0A0M4R339	Salmonella_phage	98.3	3.2e-60
AYT85822.1|1046850_1048050_+	bacteriophage protein	NA	A0A0M4RD32	Salmonella_phage	97.5	8.5e-214
AYT85823.1|1048046_1048727_+	bacteriophage protein	NA	A0A0M5M1K4	Salmonella_phage	98.7	6.9e-128
AYT85824.1|1048726_1050238_+|tail	bacteriophage tail protein	tail	S4TP62	Salmonella_phage	59.1	5.9e-111
AYT85825.1|1050252_1050771_+|tail	tail fiber protein	tail	A0A1B0VCD0	Salmonella_phage	62.8	1.7e-46
AYT85826.1|1051692_1052394_-	hypothetical protein	NA	NA	NA	NA	NA
AYT85827.1|1052706_1052985_-	hypothetical protein	NA	S4TNM0	Salmonella_phage	92.3	2.4e-26
AYT85828.1|1053410_1056023_+	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	22.6	1.1e-19
AYT85829.1|1056230_1057241_+	dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
AYT85830.1|1057403_1057949_+	hypothetical protein	NA	NA	NA	NA	NA
AYT85831.1|1057945_1059055_-	MOSC domain-containing protein	NA	NA	NA	NA	NA
AYT85832.1|1059153_1061262_+	23S rRNA m(2)G2445 methyltransferase	NA	W6LLI2	Streptococcus_phage	29.6	5.1e-20
AYT85833.1|1061274_1063182_+	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	29.8	2.4e-53
1061386:1061405	attR	AACGGCGCCGGGAAATCCAC	NA	NA	NA	NA
AYT85834.1|1063196_1064450_+	inner membrane protein	NA	NA	NA	NA	NA
AYT85835.1|1064454_1066095_+	paraquat-inducible protein B	NA	NA	NA	NA	NA
AYT85836.1|1066091_1066655_+	lipoprotein	NA	NA	NA	NA	NA
AYT85837.1|1066908_1067076_+	ribosome modulation factor	NA	NA	NA	NA	NA
AYT85838.1|1067175_1067694_-	D-3-hydroxydecanoyl-(acyl carrier-protein) dehydratase	NA	NA	NA	NA	NA
AYT85839.1|1067762_1069523_-|protease	ATP-dependent protease	protease	NA	NA	NA	NA
AYT85840.1|1069708_1070161_+	Ter macrodomain organizer matS-binding protein	NA	NA	NA	NA	NA
AYT85841.1|1070232_1071285_-	outer membrane protein A	NA	NA	NA	NA	NA
AYT85842.1|1071639_1072149_-	cell division inhibitor	NA	NA	NA	NA	NA
AYT85843.1|1072365_1072971_+	competence-specific transcriptional regulator TfoX	NA	NA	NA	NA	NA
AYT85844.1|1072957_1075111_-	inner membrane protein	NA	NA	NA	NA	NA
AYT85845.1|1075129_1075576_-	hypothetical protein	NA	NA	NA	NA	NA
AYT85846.1|1075699_1077754_+	helicase IV	NA	A7KV33	Bacillus_phage	27.6	6.5e-20
AYT85847.1|1077789_1078248_-	methylglyoxal synthase	NA	NA	NA	NA	NA
AYT85848.1|1078342_1079005_-	hypothetical protein	NA	NA	NA	NA	NA
AYT85849.1|1079175_1079592_+	hypothetical protein	NA	NA	NA	NA	NA
AYT85850.1|1079636_1079954_-	heat shock protein HspQ	NA	NA	NA	NA	NA
AYT85851.1|1080011_1081223_-	23S rRNA m(5)C1962 methyltransferase	NA	NA	NA	NA	NA
AYT85852.1|1082354_1082813_+|transposase	insertion sequence element IS200 transposase	transposase	NA	NA	NA	NA
AYT85853.1|1083549_1083831_+	acylphosphatase	NA	NA	NA	NA	NA
AYT85854.1|1083827_1084157_-	sulfite reductase	NA	NA	NA	NA	NA
AYT85855.1|1084243_1084903_-	hypothetical protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	52.4	2.7e-44
AYT85856.1|1085566_1086025_+|transposase	insertion sequence element IS200 transposase	transposase	NA	NA	NA	NA
>prophage 3
CP029907	Salmonella enterica subsp. enterica serovar Typhi strain 343077_255118 chromosome, complete genome	4774500	1530950	1604944	4774500	transposase,tRNA,protease,tail,head,plate	Burkholderia_virus(43.24%)	80	NA	NA
AYT86256.1|1530950_1531409_-|transposase	insertion sequence element IS200 transposase	transposase	NA	NA	NA	NA
AYT86257.1|1531911_1532193_+	stress response protein	NA	NA	NA	NA	NA
AYT86258.1|1532461_1533283_+|protease	serine protease	protease	NA	NA	NA	NA
AYT86259.1|1533317_1533647_-	multidrug efflux system protein MdtI	NA	NA	NA	NA	NA
AYT86260.1|1533633_1533996_-	multidrug efflux system protein MdtJ	NA	NA	NA	NA	NA
AYT86261.1|1534107_1534278_-	hypothetical protein	NA	NA	NA	NA	NA
AYT86262.1|1534412_1535447_+	hypothetical protein	NA	NA	NA	NA	NA
AYT86263.1|1535621_1537010_-	pyridine nucleotide transhydrogenase subunit beta	NA	NA	NA	NA	NA
AYT86264.1|1537020_1538550_-	pyridine nucleotide transhydrogenase subunit alpha	NA	NA	NA	NA	NA
AYT86265.1|1539076_1540021_+	hypothetical protein	NA	NA	NA	NA	NA
AYT86266.1|1540202_1540592_-	bacteriophage transcriptional regulator	NA	Q6QIE8	Burkholderia_phage	54.2	4.5e-31
AYT86267.1|1540563_1541016_-	hypothetical protein	NA	A4JWM5	Burkholderia_virus	46.6	1.2e-24
AYT86268.1|1541210_1541441_-	hypothetical protein	NA	NA	NA	NA	NA
AYT86269.1|1541437_1542121_-	hypothetical protein	NA	A0A2P9JZH4	Alteromonadaceae_phage	37.3	2.6e-34
AYT86270.1|1542117_1542333_-	hypothetical protein	NA	NA	NA	NA	NA
AYT86271.1|1542325_1542709_-	hypothetical protein	NA	K7PJQ4	Enterobacteria_phage	58.9	2.3e-27
AYT86272.1|1542705_1543008_-	hypothetical protein	NA	NA	NA	NA	NA
AYT86273.1|1543017_1543290_-	hypothetical protein	NA	NA	NA	NA	NA
AYT86274.1|1543578_1544109_-	bacteriophage host-nuclease inhibitor protein	NA	L7P7T1	Pseudomonas_phage	66.1	3.4e-58
AYT86275.1|1544136_1544406_-	hypothetical protein	NA	NA	NA	NA	NA
AYT86276.1|1544408_1545575_-	ExeA protein	NA	A4JWN1	Burkholderia_virus	59.7	3.3e-122
AYT86277.1|1545585_1547355_-	hypothetical protein	NA	Q6QIE0	Burkholderia_phage	68.5	2.8e-229
AYT86278.1|1547532_1547964_-	hypothetical protein	NA	A4JWN3	Burkholderia_virus	57.3	4.5e-32
AYT86279.1|1547959_1548952_+	nucleoid-associated protein	NA	A0A291AUQ0	Sinorhizobium_phage	37.3	3.0e-55
AYT86280.1|1549195_1549546_+	hypothetical protein	NA	A4JWP3	Burkholderia_virus	53.0	4.5e-22
AYT86281.1|1550260_1550911_+	lipoprotein	NA	Q5ZQY9	Pseudomonas_phage	32.9	8.1e-09
AYT86282.1|1550907_1551234_+	hypothetical protein	NA	Q6QIC4	Burkholderia_phage	49.5	9.6e-19
AYT86283.1|1551233_1551545_+	hypothetical protein	NA	A0A0S4L0A3	Pseudomonas_phage	62.6	9.4e-32
AYT86284.1|1551544_1552090_+	hypothetical protein	NA	A4JWJ3	Burkholderia_virus	67.6	9.3e-59
AYT86285.1|1552086_1553682_+	hypothetical protein	NA	A4JWJ4	Burkholderia_virus	62.6	9.3e-184
AYT86286.1|1553681_1555178_+	hypothetical protein	NA	A4JWJ5	Burkholderia_virus	59.6	8.0e-169
AYT86287.1|1555158_1555980_+|head	phage head morphogenesis protein	head	A4JWJ6	Burkholderia_virus	61.2	5.3e-98
AYT86288.1|1555982_1556441_+	bacteriophage protein	NA	Q6QIB8	Burkholderia_phage	44.8	1.5e-30
AYT86289.1|1556655_1557771_+	hypothetical protein	NA	A4JWJ9	Burkholderia_virus	51.1	7.9e-97
AYT86290.1|1557785_1558739_+	hypothetical protein	NA	A4JWK0	Burkholderia_virus	44.5	5.2e-65
AYT86291.1|1558748_1559087_+	hypothetical protein	NA	NA	NA	NA	NA
AYT86292.1|1559088_1559535_+	hypothetical protein	NA	A4JWK2	Burkholderia_virus	52.3	2.2e-34
AYT86293.1|1559534_1559999_+	hypothetical protein	NA	Q6QIB2	Burkholderia_phage	51.7	9.1e-39
AYT86294.1|1559995_1560250_+	hypothetical protein	NA	NA	NA	NA	NA
AYT86295.1|1560239_1561667_+|tail	bacteriophage tail sheath protein	tail	A4JWK5	Burkholderia_virus	77.4	3.7e-216
AYT86296.1|1561666_1562188_+|tail	tail core protein	tail	A4JWK6	Burkholderia_virus	68.2	8.0e-68
AYT86297.1|1562190_1562472_+	hypothetical protein	NA	NA	NA	NA	NA
AYT86298.1|1562569_1562905_+	hypothetical protein	NA	NA	NA	NA	NA
AYT86299.1|1563081_1565547_+	bacteriophage protein	NA	A4JWL0	Burkholderia_virus	42.6	2.2e-168
AYT86300.1|1565546_1566431_+	hypothetical protein	NA	A4JWL1	Burkholderia_virus	47.0	7.5e-50
AYT86301.1|1566427_1566643_+|tail	bacteriophage tail fiber protein	tail	Q6QIA3	Burkholderia_phage	60.0	2.4e-18
AYT86302.1|1566630_1567785_+	bacteriophage regulatory protein	NA	Q6QIA2	Burkholderia_phage	47.1	4.7e-84
AYT86303.1|1567781_1568309_+|plate	bacteriophage baseplate protein	plate	Q6QIA1	Burkholderia_phage	46.5	1.5e-21
AYT86304.1|1568365_1568713_+|plate	bacteriophage baseplate protein	plate	Q6QIA0	Burkholderia_phage	60.6	8.6e-34
AYT86305.1|1568703_1569807_+|plate	bacteriophage baseplate assembly protein	plate	Q6QI99	Burkholderia_phage	54.3	5.4e-106
AYT86306.1|1569799_1570378_+|tail	bacteriophage tail fiber protein	tail	A4JWL7	Burkholderia_virus	65.8	6.4e-66
AYT86307.1|1571195_1571405_+|tail	phage tail protein	tail	NA	NA	NA	NA
AYT86308.1|1571918_1572536_+|tail	bacteriophage tail fiber assembly protein	tail	Q9MCR5	Enterobacteria_phage	59.9	5.8e-65
AYT86309.1|1574046_1574619_+	DNA-invertase	NA	A0A0A7NPV4	Enterobacteria_phage	84.7	8.8e-84
AYT86310.1|1574899_1576282_+	amino acid permease	NA	NA	NA	NA	NA
AYT86311.1|1576343_1576679_-	hypothetical protein	NA	NA	NA	NA	NA
AYT86312.1|1576805_1577537_+	two-component response regulator	NA	NA	NA	NA	NA
AYT86313.1|1578017_1579169_+	outer membrane protein	NA	Q1MVN1	Enterobacteria_phage	59.1	3.2e-117
AYT86314.1|1579321_1581028_+	metal-dependent hydrolase	NA	NA	NA	NA	NA
AYT86315.1|1581135_1582440_+	two component sensor kinase	NA	W8CYF6	Bacillus_phage	22.7	5.7e-14
AYT86316.1|1582515_1583445_+	DNA sequence-specific contrahelicase	NA	NA	NA	NA	NA
AYT86317.1|1583441_1584845_-	fumarate hydratase class II	NA	NA	NA	NA	NA
AYT86318.1|1585012_1586659_-	Fumarate hydratase class I	NA	NA	NA	NA	NA
AYT86319.1|1586858_1588034_+	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
AYT86320.1|1588136_1589645_+	hypothetical protein	NA	NA	NA	NA	NA
AYT86321.1|1590350_1591352_+	adenosine deaminase	NA	NA	NA	NA	NA
AYT86322.1|1591425_1592541_-	oxidoreductase	NA	NA	NA	NA	NA
AYT86323.1|1592643_1592799_+	hypothetical protein	NA	NA	NA	NA	NA
AYT86324.1|1593097_1593313_+	oriC-binding nucleoid-associated protein	NA	NA	NA	NA	NA
AYT86325.1|1593401_1593842_+	hypothetical protein	NA	NA	NA	NA	NA
AYT86326.1|1593918_1594500_+	Na(+)-translocating NADH-quinone reductase subunit E	NA	NA	NA	NA	NA
AYT86327.1|1594499_1595078_+	ferredoxin-like protein	NA	NA	NA	NA	NA
AYT86328.1|1595070_1597092_+	NADH reducing dehydrogenase	NA	NA	NA	NA	NA
AYT86329.1|1597092_1598151_+	electron transport complex protein RnfD	NA	NA	NA	NA	NA
AYT86330.1|1598154_1598775_+	electron transport complex protein RnfG	NA	NA	NA	NA	NA
AYT86331.1|1598777_1599470_+	electron transport complex protein RsxE	NA	NA	NA	NA	NA
AYT86332.1|1599469_1600105_+	endonuclease III	NA	NA	NA	NA	NA
AYT86333.1|1600705_1602211_+	proton/oligopeptide symporter	NA	NA	NA	NA	NA
AYT86334.1|1602315_1602921_+	glutathione S-transferase	NA	NA	NA	NA	NA
AYT86335.1|1603669_1604944_-|tRNA	tyrosyl-tRNA synthetase	tRNA	K4F5T3	Cronobacter_phage	42.1	1.6e-85
>prophage 4
CP029907	Salmonella enterica subsp. enterica serovar Typhi strain 343077_255118 chromosome, complete genome	4774500	1785989	1790401	4774500		Escherichia_phage(50.0%)	6	NA	NA
AYT86519.1|1785989_1786229_+	virulence protein	NA	K7P6H1	Enterobacteria_phage	88.6	8.5e-33
AYT86520.1|1787101_1787911_+	toxin-like protein	NA	A5LH53	Enterobacteria_phage	50.0	2.1e-62
AYT86521.1|1787983_1788361_+	hypothetical protein	NA	I1TQ41	Pseudomonas_phage	38.4	2.2e-14
AYT86522.1|1788508_1789051_-	hypothetical protein	NA	A0A0U2S643	Escherichia_phage	67.0	6.2e-71
AYT86523.1|1789242_1789971_-	pertussis toxin subunit ArtA	NA	A0A0U2KD26	Escherichia_phage	53.3	4.9e-63
AYT86524.1|1789987_1790401_-	pertussis-like toxin subunit	NA	A0A0U2KD34	Escherichia_phage	38.6	1.4e-19
>prophage 5
CP029907	Salmonella enterica subsp. enterica serovar Typhi strain 343077_255118 chromosome, complete genome	4774500	2085939	2096446	4774500		Enterobacteria_phage(37.5%)	10	NA	NA
AYT86797.1|2085939_2087253_-	dehydratase RfbH	NA	H8ZJ36	Ostreococcus_tauri_virus	35.1	7.0e-52
AYT86798.1|2087279_2088359_-	CDP-glucose 4,6-dehydratase	NA	A0A222YY99	Synechococcus_phage	24.1	1.3e-16
AYT86799.1|2088363_2089137_-	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
AYT86800.1|2089152_2090127_-	reductase RfbI	NA	NA	NA	NA	NA
AYT86801.1|2090132_2090684_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	58.6	7.7e-53
AYT86802.1|2090684_2091563_-	TDP-glucose pyrophosphorylase	NA	I7I009	Enterobacteria_phage	64.8	2.3e-107
AYT86803.1|2091610_2092510_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	36.3	7.9e-31
AYT86804.1|2092509_2093595_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	53.9	1.6e-102
AYT86805.1|2093971_2094865_-	UTP-glucose-1-phosphate uridylyltransferase	NA	A0A127AW70	Bacillus_phage	42.2	4.8e-44
AYT86806.1|2095042_2096446_-	colanic acid biosynthesis protein WcaM	NA	A0A291LBB9	Klebsiella_phage	26.5	1.1e-21
>prophage 6
CP029907	Salmonella enterica subsp. enterica serovar Typhi strain 343077_255118 chromosome, complete genome	4774500	2172339	2181507	4774500	tRNA	Enterobacteria_phage(66.67%)	10	NA	NA
AYT86869.1|2172339_2174373_+|tRNA	methionyl-tRNA synthetase	tRNA	A0A1V0SDF2	Indivirus	26.9	6.1e-55
AYT86870.1|2174613_2175072_+	lipoprotein	NA	Q9EYF5	Enterobacteria_phage	72.5	8.4e-53
AYT86871.1|2175243_2175774_+	lipoprotein	NA	NA	NA	NA	NA
AYT86872.1|2175830_2176298_-	hypothetical protein	NA	Q9EYF4	Enterobacteria_phage	90.3	3.9e-74
AYT86873.1|2176344_2177064_-	two-component system response regulator	NA	NA	NA	NA	NA
AYT86874.1|2177060_2178743_-	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	89.7	4.3e-272
AYT86875.1|2178965_2179697_+	transcriptional regulator	NA	Q9EYF2	Enterobacteria_phage	87.9	4.5e-101
AYT86876.1|2179756_2179864_+	hypothetical protein	NA	NA	NA	NA	NA
AYT86877.1|2179844_2180576_-	ABC transporter permease	NA	NA	NA	NA	NA
AYT86878.1|2180559_2181507_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.2	1.7e-23
>prophage 7
CP029907	Salmonella enterica subsp. enterica serovar Typhi strain 343077_255118 chromosome, complete genome	4774500	2716943	2730335	4774500	tail	Salmonella_phage(70.0%)	11	NA	NA
AYT87307.1|2716943_2717162_-	hypothetical protein	NA	Q53ZE7	Salmonella_virus	71.9	1.9e-18
AYT87308.1|2717252_2718353_-	hypothetical protein	NA	A0A1S6KZZ5	Salmonella_phage	88.3	1.0e-176
AYT87309.1|2718349_2718835_-|tail	bacteriophage tail protein	tail	E5G6Q2	Salmonella_phage	80.0	2.4e-66
AYT87310.1|2718831_2721909_-|tail	bacteriophage tail protein	tail	E5G6Q1	Salmonella_phage	63.1	0.0e+00
AYT87311.1|2721901_2722021_-	hypothetical protein	NA	E5G6Q0	Salmonella_phage	87.2	2.8e-13
AYT87312.1|2722035_2722338_-|tail	phage tail protein	tail	A0A1S6KZZ9	Salmonella_phage	89.0	7.0e-40
AYT87313.1|2722392_2722908_-|tail	major tail tube protein	tail	A0A1S6L002	Salmonella_phage	95.9	5.6e-90
AYT87314.1|2722917_2724090_-|tail	major tail sheath protein	tail	A0A1S6KZY7	Salmonella_phage	90.3	3.5e-204
AYT87315.1|2724232_2724805_-	DNA-invertase	NA	A0A0F7LA37	Escherichia_phage	86.3	1.4e-86
AYT87316.1|2725482_2726598_+	glycosyltransferase	NA	NA	NA	NA	NA
AYT87317.1|2726678_2730335_+	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	28.6	1.0e-44
>prophage 8
CP029907	Salmonella enterica subsp. enterica serovar Typhi strain 343077_255118 chromosome, complete genome	4774500	3061530	3105233	4774500	protease,transposase,bacteriocin,tRNA	Bacillus_virus(33.33%)	44	NA	NA
AYT87622.1|3061530_3061989_-|transposase	insertion sequence element IS200 transposase	transposase	NA	NA	NA	NA
AYT87623.1|3062178_3063258_-	fructose 1,6-bisphosphate aldolase	NA	NA	NA	NA	NA
AYT87624.1|3063359_3064523_-	phosphoglycerate kinase	NA	NA	NA	NA	NA
AYT87625.1|3064544_3065591_-	D-erythrose 4-phosphate dehydrogenase	NA	NA	NA	NA	NA
AYT87626.1|3065964_3066390_+	hypothetical protein	NA	NA	NA	NA	NA
AYT87627.1|3066415_3066994_+	hypothetical protein	NA	NA	NA	NA	NA
AYT87628.1|3067027_3067702_+	hypothetical protein	NA	NA	NA	NA	NA
AYT87629.1|3067683_3068367_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
AYT87630.1|3068360_3069017_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	28.6	1.6e-09
AYT87631.1|3069121_3069580_-|transposase	insertion sequence element IS200 transposase	transposase	NA	NA	NA	NA
AYT87632.1|3069768_3071760_-	transketolase	NA	NA	NA	NA	NA
AYT87633.1|3072035_3072794_+|protease	metalloprotease	protease	NA	NA	NA	NA
AYT87634.1|3072894_3073815_-	agmatine ureohydrolase	NA	NA	NA	NA	NA
AYT87635.1|3074042_3076019_-	biosynthetic arginine decarboxylase	NA	NA	NA	NA	NA
AYT87636.1|3076027_3076159_-	hypothetical protein	NA	NA	NA	NA	NA
AYT87637.1|3076453_3076753_-	membrane protein	NA	NA	NA	NA	NA
AYT87638.1|3076808_3077963_+	S-adenosylmethionine synthetase	NA	A0A2H4PQS6	Staphylococcus_phage	63.9	1.5e-130
AYT87639.1|3078455_3079850_+	galactose-proton symport	NA	NA	NA	NA	NA
AYT87640.1|3079928_3080426_+	hypothetical protein	NA	NA	NA	NA	NA
AYT87641.1|3080521_3081229_+	endonuclease I	NA	NA	NA	NA	NA
AYT87642.1|3081305_3082037_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
AYT87643.1|3082056_3083004_+	glutathione synthetase	NA	NA	NA	NA	NA
AYT87644.1|3083219_3083783_+	hypothetical protein	NA	NA	NA	NA	NA
AYT87645.1|3083782_3084199_+	Holliday junction resolvase	NA	NA	NA	NA	NA
AYT87646.1|3084245_3084932_-	global regulatory protein	NA	NA	NA	NA	NA
AYT87647.1|3085061_3086042_-	type II secretion system ATP-binding protein	NA	NA	NA	NA	NA
AYT87648.1|3086059_3086764_+	hypothetical protein	NA	NA	NA	NA	NA
AYT87649.1|3086782_3087349_+	hypothetical protein	NA	NA	NA	NA	NA
AYT87650.1|3087345_3087636_+	hypothetical protein	NA	NA	NA	NA	NA
AYT87651.1|3087643_3088237_+	dITP/XTP pyrophosphatase	NA	NA	NA	NA	NA
AYT87652.1|3088229_3089366_+	oxygen-independent coproporphyrinogen III oxidase	NA	NA	NA	NA	NA
AYT87653.1|3089456_3090464_-	hypothetical protein	NA	NA	NA	NA	NA
AYT87654.1|3090596_3091643_-	L-asparaginase	NA	NA	NA	NA	NA
AYT87655.1|3091961_3092420_+|transposase	insertion sequence element IS200 transposase	transposase	NA	NA	NA	NA
AYT87656.1|3092542_3093262_-	hypothetical protein	NA	NA	NA	NA	NA
AYT87657.1|3093311_3093638_-	hypothetical protein	NA	NA	NA	NA	NA
AYT87658.1|3093637_3094357_-|tRNA	tRNA m(7)G46 methyltransferase	tRNA	NA	NA	NA	NA
AYT87659.1|3094511_3095564_+	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
AYT87660.1|3095591_3095867_+	oxidative damage protection protein	NA	NA	NA	NA	NA
AYT87661.1|3095979_3097065_+	membrane-bound lytic murein transglycosylase C	NA	A0A0H3V0Q1	Geobacillus_virus	39.0	5.8e-12
AYT87662.1|3097281_3098538_+	nucleoside permease	NA	NA	NA	NA	NA
AYT87663.1|3101148_3101856_+	hypothetical protein	NA	NA	NA	NA	NA
AYT87664.1|3104445_3104712_+|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
AYT87665.1|3104954_3105233_+|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
>prophage 9
CP029907	Salmonella enterica subsp. enterica serovar Typhi strain 343077_255118 chromosome, complete genome	4774500	3479807	3517865	4774500	portal,transposase,capsid,integrase,terminase,tail,plate	Salmonella_phage(82.05%)	46	3474771:3474785	3486937:3486951
3474771:3474785	attL	CGAATTTCTTTTTCA	NA	NA	NA	NA
AYT87993.1|3479807_3481454_-	acetolactate synthase large subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	31.5	9.0e-65
AYT87994.1|3481593_3481692_-	ilvGMEDA operon attenuator peptide	NA	NA	NA	NA	NA
AYT87995.1|3481947_3482277_+	hypothetical protein	NA	NA	NA	NA	NA
AYT87996.1|3482317_3483370_-|integrase	bacteriophage integrase	integrase	A0A218M4I3	Erwinia_phage	57.3	3.6e-107
AYT87997.1|3483765_3484335_-	repressor protein	NA	A0A1S6KZZ7	Salmonella_phage	43.4	2.5e-38
AYT87998.1|3484460_3484682_+	hypothetical protein	NA	NA	NA	NA	NA
AYT87999.1|3484714_3485224_+	regulatory protein cII	NA	E5G6L3	Salmonella_phage	98.8	5.8e-87
AYT88000.1|3485398_3485623_+	hypothetical protein	NA	NA	NA	NA	NA
AYT88001.1|3485645_3485987_+	hypothetical protein	NA	E5G6L5	Salmonella_phage	98.2	1.7e-55
AYT88002.1|3486054_3486288_+	hypothetical protein	NA	E5G6L6	Salmonella_phage	94.8	2.0e-31
AYT88003.1|3486287_3486515_+	hypothetical protein	NA	E5G6L7	Salmonella_phage	100.0	2.7e-36
AYT88004.1|3486511_3487369_+	DNA adenine methylase	NA	E5G6L8	Salmonella_phage	97.2	3.5e-161
3486937:3486951	attR	TGAAAAAGAAATTCG	NA	NA	NA	NA
AYT88005.1|3487365_3489780_+	endonuclease	NA	E5G6L9	Salmonella_phage	97.5	0.0e+00
AYT88006.1|3489933_3490122_+	hypothetical protein	NA	E5G6M0	Salmonella_phage	95.2	7.9e-26
AYT88007.1|3492089_3493004_+	hypothetical protein	NA	NA	NA	NA	NA
AYT88008.1|3493000_3493741_+	hypothetical protein	NA	NA	NA	NA	NA
AYT88009.1|3493775_3494813_-|capsid,portal	capsid portal protein	capsid,portal	A0A1S6KZW5	Salmonella_phage	89.5	1.3e-173
AYT88010.1|3494812_3496579_-|terminase	terminase subunit	terminase	A0A1S6KZW3	Salmonella_phage	99.5	0.0e+00
AYT88011.1|3496721_3497555_+|capsid	capsid scaffolding protein	capsid	A0A1S6KZW9	Salmonella_phage	90.6	1.5e-121
AYT88012.1|3497571_3498630_+|capsid	major capsid protein	capsid	E5G6M6	Salmonella_phage	93.1	1.4e-180
AYT88013.1|3498633_3499284_+|terminase	terminase endonuclease subunit	terminase	E5G6M7	Salmonella_phage	96.3	8.7e-112
AYT88014.1|3499316_3499844_+|capsid	capsid completion protein	capsid	A0A1S6KZW8	Salmonella_phage	89.0	2.1e-76
AYT88015.1|3499843_3500047_+|tail	phage tail protein	tail	E5G6M9	Salmonella_phage	92.5	1.4e-31
AYT88016.1|3500050_3500266_+	hypothetical protein	NA	E5G6N0	Salmonella_phage	80.3	1.8e-26
AYT88017.1|3500285_3500759_+	lysozyme	NA	E5G6N1	Salmonella_phage	91.0	3.7e-80
AYT88018.1|3500760_3501138_+	hypothetical protein	NA	A0A1S6KZZ2	Salmonella_phage	40.0	2.3e-16
AYT88019.1|3501134_3501563_+	regulatory protein	NA	E5G6N2	Salmonella_phage	77.3	2.2e-47
AYT88020.1|3501658_3502090_+|tail	phage tail protein	tail	E5G6N3	Salmonella_phage	95.1	1.5e-72
AYT88021.1|3502082_3502529_+|tail	phage tail completion protein	tail	A0A1S6L001	Salmonella_phage	85.6	6.6e-63
AYT88022.1|3502597_3503176_+|plate	phage baseplate assembly protein	plate	A0A1S6KZX7	Salmonella_phage	86.5	5.5e-94
AYT88023.1|3503172_3503532_+|plate	phage baseplate assembly protein	plate	A0A1S6KZZ4	Salmonella_phage	84.9	6.1e-51
AYT88024.1|3503518_3504427_+|plate	phage baseplate assembly protein	plate	A0A1S6KZY6	Salmonella_phage	89.7	1.3e-142
AYT88025.1|3504419_3505025_+|tail	phage tail protein	tail	A0A1S6L000	Salmonella_phage	92.0	2.0e-110
AYT88026.1|3505021_3506536_+|tail	variable tail fiber protein	tail	M1TAS6	Escherichia_phage	73.2	6.8e-200
AYT88027.1|3506535_3507129_+|tail	tail fiber assembly protein	tail	M1SV83	Escherichia_phage	64.3	9.2e-60
AYT88028.1|3507100_3507541_-|tail	tail fiber assembly protein	tail	A0A0F7LDZ0	Escherichia_phage	68.0	3.1e-52
AYT88029.1|3507963_3508536_+	DNA-invertase	NA	A0A0F7LA37	Escherichia_phage	86.3	1.4e-86
AYT88030.1|3508678_3509851_+|tail	bacteriophage major tail sheath protein	tail	A0A1S6KZY7	Salmonella_phage	90.3	3.5e-204
AYT88031.1|3509860_3510376_+|tail	major tail tube protein	tail	A0A1S6L002	Salmonella_phage	95.9	5.6e-90
AYT88032.1|3510430_3510733_+|tail	phage tail protein	tail	A0A1S6KZZ9	Salmonella_phage	89.0	7.0e-40
AYT88033.1|3510747_3510867_+	bacteriophage protein	NA	E5G6Q0	Salmonella_phage	87.2	2.8e-13
AYT88034.1|3510859_3513937_+|tail	bacteriophage tail protein	tail	E5G6Q1	Salmonella_phage	63.1	0.0e+00
AYT88035.1|3513933_3514419_+|tail	bacteriophage tail protein	tail	E5G6Q2	Salmonella_phage	80.0	2.4e-66
AYT88036.1|3514415_3515516_+	hypothetical protein	NA	A0A1S6KZZ5	Salmonella_phage	88.3	1.0e-176
AYT88037.1|3515606_3515825_+	hypothetical protein	NA	Q53ZE7	Salmonella_virus	69.0	7.5e-20
AYT88038.1|3517406_3517865_+|transposase	insertion sequence element IS200 transposase	transposase	NA	NA	NA	NA
>prophage 10
CP029907	Salmonella enterica subsp. enterica serovar Typhi strain 343077_255118 chromosome, complete genome	4774500	4433176	4507632	4774500	portal,capsid,integrase,terminase,tail,plate	Salmonella_phage(82.61%)	75	4494690:4494706	4507791:4507807
AYT88815.1|4433176_4435126_+	hypothetical protein	NA	A0A2K9V411	Faecalibacterium_phage	38.3	5.9e-31
AYT88816.1|4435197_4436106_+	hypothetical protein	NA	NA	NA	NA	NA
AYT88817.1|4436179_4437079_+	hypothetical protein	NA	NA	NA	NA	NA
AYT88818.1|4437120_4437480_+	hypothetical protein	NA	NA	NA	NA	NA
AYT88819.1|4437579_4437849_-	hypothetical protein	NA	NA	NA	NA	NA
AYT88820.1|4437980_4439255_-	UV protection protein	NA	F1C5A5	Cronobacter_phage	62.0	7.5e-152
AYT88821.1|4439474_4439852_+	hypothetical protein	NA	NA	NA	NA	NA
AYT88822.1|4439938_4440157_-	hypothetical protein	NA	E5G6Q4	Salmonella_phage	75.0	4.9e-27
AYT88823.1|4440224_4441325_-	hypothetical protein	NA	E5G6Q3	Salmonella_phage	92.1	7.9e-190
AYT88824.1|4441321_4441807_-|tail	phage tail protein	tail	E5G6Q2	Salmonella_phage	93.2	9.4e-71
AYT88825.1|4441806_4444587_-	hypothetical protein	NA	A0A2H4JGB2	uncultured_Caudovirales_phage	41.1	3.5e-125
AYT88826.1|4444579_4444699_-	hypothetical protein	NA	E5G6Q0	Salmonella_phage	94.9	1.2e-14
AYT88827.1|4444713_4445016_-|tail	phage tail protein	tail	E5G6P9	Salmonella_phage	93.9	3.3e-42
AYT88828.1|4445070_4445586_-|tail	major tail tube protein	tail	E5G6P8	Salmonella_phage	99.4	2.7e-92
AYT88829.1|4445595_4446768_-|tail	major tail sheath protein	tail	A0A1S6KZY7	Salmonella_phage	99.5	9.8e-223
AYT88830.1|4447302_4448025_+	invasion-associated secreted protein	NA	NA	NA	NA	NA
AYT88831.1|4448222_4448630_-|tail	phage tail fiber protein	tail	A0A1B0V844	Salmonella_phage	84.2	4.1e-59
AYT88832.1|4448636_4450256_-|tail	phage tail fiber protein	tail	E5G6P0	Salmonella_phage	90.9	2.7e-154
AYT88833.1|4450252_4450858_-|tail	phage tail protein	tail	A0A1S6L000	Salmonella_phage	92.0	2.0e-110
AYT88834.1|4450850_4451759_-|plate	phage baseplate assembly protein	plate	E5G6N8	Salmonella_phage	97.0	5.2e-155
AYT88835.1|4451745_4452105_-|plate	phage baseplate assembly protein	plate	A0A1S6KZZ4	Salmonella_phage	96.6	6.8e-58
AYT88836.1|4452101_4452680_-|plate	phage baseplate assembly protein	plate	E5G6N6	Salmonella_phage	99.5	3.9e-108
AYT88837.1|4452748_4453195_-|tail	phage tail completion protein	tail	A0A1S6L001	Salmonella_phage	90.4	2.2e-66
AYT88838.1|4453187_4453619_-|tail	phage tail protein	tail	A0A1S6KZY0	Salmonella_phage	99.3	1.1e-75
AYT88839.1|4453714_4454140_-	regulatory protein	NA	A0A1S6KZX8	Salmonella_phage	97.9	2.5e-67
AYT88840.1|4454139_4454517_-	hypothetical protein	NA	A0A1S6KZZ2	Salmonella_phage	99.2	1.5e-60
AYT88841.1|4454521_4454992_-	lysozyme	NA	A0A1S6KZY9	Salmonella_phage	97.4	1.0e-85
AYT88842.1|4455011_4455227_-	hypothetical protein	NA	E5G6N0	Salmonella_phage	98.6	3.8e-32
AYT88843.1|4455230_4455434_-|tail	phage tail protein	tail	E5G6M9	Salmonella_phage	100.0	3.8e-34
AYT88844.1|4455433_4455898_-|capsid	capsid completion protein	capsid	A0A1S6KZW8	Salmonella_phage	98.1	2.4e-84
AYT88845.1|4455991_4456642_-|terminase	phage terminase	terminase	E5G6M7	Salmonella_phage	99.5	2.4e-114
AYT88846.1|4456645_4457710_-|capsid	major capsid protein	capsid	A0A1S6KZZ3	Salmonella_phage	98.3	1.3e-194
AYT88847.1|4457726_4458560_-|capsid	capsid scaffolding protein	capsid	E5G6M5	Salmonella_phage	87.4	6.1e-126
AYT88848.1|4458702_4460469_+|terminase	terminase subunit	terminase	A0A1S6KZW3	Salmonella_phage	96.4	0.0e+00
AYT88849.1|4460465_4461512_+|capsid,portal	capsid portal protein	capsid,portal	A0A1S6KZW5	Salmonella_phage	86.6	2.1e-176
AYT88850.1|4461560_4462256_-	hypothetical protein	NA	NA	NA	NA	NA
AYT88851.1|4462275_4463340_-	hypothetical protein	NA	NA	NA	NA	NA
AYT88852.1|4463336_4464401_-	hypothetical protein	NA	NA	NA	NA	NA
AYT88853.1|4465325_4467734_-	replication endonuclease	NA	A0A1S6L028	Salmonella_phage	95.1	0.0e+00
AYT88854.1|4467724_4468585_-	DNA adenine methylase	NA	E5G6L8	Salmonella_phage	81.8	3.4e-132
AYT88855.1|4468581_4469166_-	exonuclease	NA	A0A1S6L012	Salmonella_phage	73.7	1.1e-76
AYT88856.1|4469162_4469390_-	hypothetical protein	NA	A0A1S6L007	Salmonella_phage	94.7	1.0e-35
AYT88857.1|4469389_4469623_-	hypothetical protein	NA	A0A1S6L021	Salmonella_phage	84.4	9.8e-26
AYT88858.1|4469690_4470032_-	hypothetical protein	NA	A0A1S6L019	Salmonella_phage	99.1	4.6e-56
AYT88859.1|4469995_4470196_-	hypothetical protein	NA	A0A1S6L005	Salmonella_phage	97.0	4.6e-32
AYT88860.1|4470203_4470713_-	phage regulatory protein	NA	A0A1S6L008	Salmonella_phage	94.1	1.3e-83
AYT88861.1|4470745_4470988_-	phage regulatory protein	NA	A0A1S6KZZ6	Salmonella_phage	98.8	2.3e-38
AYT88862.1|4471104_4471737_+	phage repressor protein cI	NA	A0A1S6KZZ7	Salmonella_phage	58.6	1.4e-66
AYT88863.1|4471740_4472766_+|integrase	phage integrase	integrase	A0A1S6L016	Salmonella_phage	98.2	2.7e-200
AYT88864.1|4472872_4473226_-	protein samA'	NA	I6S1S3	Salmonella_phage	59.3	6.7e-10
AYT88865.1|4473842_4474130_+	hypothetical protein	NA	NA	NA	NA	NA
AYT88866.1|4474140_4475031_+	methyltransferase	NA	NA	NA	NA	NA
AYT88867.1|4475030_4475777_+	hypothetical protein	NA	NA	NA	NA	NA
AYT88868.1|4476078_4478049_-	Vi polysaccharide exporter protein	NA	NA	NA	NA	NA
AYT88869.1|4478068_4479373_-	Vi polysaccharide exporter inner-membrane protein	NA	NA	NA	NA	NA
AYT88870.1|4479395_4480091_-	Vi polysaccharide exporter ATP-binding protein	NA	NA	NA	NA	NA
AYT88871.1|4480116_4480911_-	Vi polysaccharide exporter inner-membrane protein	NA	NA	NA	NA	NA
AYT88872.1|4480920_4481988_-	Vi polysaccharide exporter protein	NA	NA	NA	NA	NA
AYT88873.1|4482032_4483769_-	Vi polysaccharide biosynthesis protein TviE	NA	NA	NA	NA	NA
AYT88874.1|4483768_4486264_-	Vi polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
AYT88875.1|4486287_4487334_-	Vi polysaccharide biosynthesis epimerase	NA	A0A2K9L0I7	Tupanvirus	45.0	1.4e-74
AYT88876.1|4487336_4488614_-	Vi polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase	NA	M1HYW7	Paramecium_bursaria_Chlorella_virus	26.7	1.3e-21
AYT88877.1|4488858_4489398_-	Vi polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
AYT88878.1|4490251_4491763_+	DNA helicase	NA	A0A126DN25	Acinetobacter_phage	29.0	2.0e-42
AYT88879.1|4491746_4493336_+	hypothetical protein	NA	NA	NA	NA	NA
AYT88880.1|4493499_4494513_+|integrase	phage integrase	integrase	NA	NA	NA	NA
4494690:4494706	attL	GTGGTGCCCGGACTCGG	NA	NA	NA	NA
AYT88881.1|4494939_4495233_+	hypothetical protein	NA	NA	NA	NA	NA
AYT88882.1|4495229_4495718_+	hypothetical protein	NA	NA	NA	NA	NA
AYT88883.1|4495897_4496350_-	hypothetical protein	NA	NA	NA	NA	NA
AYT88884.1|4501572_4502034_+	hypothetical protein	NA	NA	NA	NA	NA
AYT88885.1|4502030_4502252_+	transcriptional regulator	NA	A0A2I7S995	Vibrio_phage	58.3	4.6e-17
AYT88886.1|4503108_4503891_+	hypothetical protein	NA	NA	NA	NA	NA
AYT88887.1|4504517_4504742_-	hypothetical protein	NA	NA	NA	NA	NA
AYT88888.1|4504871_4506062_-	SH3 domain-containing protein	NA	NA	NA	NA	NA
AYT88889.1|4506372_4507632_-|integrase	bacteriophage integrase	integrase	B7SYF8	Stenotrophomonas_phage	41.7	3.2e-78
4507791:4507807	attR	GTGGTGCCCGGACTCGG	NA	NA	NA	NA
