The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP033433	Cohnella sp. 18JY8-7 chromosome, complete genome	5289049	1355732	1381507	5289049	bacteriocin,coat	uncultured_Caudovirales_phage(75.0%)	21	NA	NA
AYQ72232.1|1355732_1356041_+|bacteriocin	heterocycloanthracin/sonorensin family bacteriocin	bacteriocin	NA	NA	NA	NA
AYQ75522.1|1356569_1358405_+|bacteriocin	bacteriocin maturation protein	bacteriocin	NA	NA	NA	NA
AYQ72233.1|1358401_1360345_+|bacteriocin	bacteriocin biosynthesis protein SagD	bacteriocin	NA	NA	NA	NA
AYQ75523.1|1360361_1361960_+	SagB/ThcOx family dehydrogenase	NA	NA	NA	NA	NA
AYQ72234.1|1362069_1362969_+	aldo/keto reductase	NA	NA	NA	NA	NA
AYQ72235.1|1363147_1366924_+	PAS domain S-box protein	NA	NA	NA	NA	NA
AYQ72236.1|1366916_1367579_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AYQ75524.1|1367829_1368252_+	chemotaxis protein CheX	NA	NA	NA	NA	NA
AYQ72237.1|1368254_1368617_+	response regulator	NA	NA	NA	NA	NA
AYQ72238.1|1368670_1370242_+	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	43.0	4.2e-11
AYQ72239.1|1370292_1372128_+	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	33.6	2.1e-17
AYQ72240.1|1372153_1373122_+	HD domain-containing protein	NA	NA	NA	NA	NA
AYQ72241.1|1373135_1373564_+	purine-binding chemotaxis protein CheW	NA	NA	NA	NA	NA
AYQ75525.1|1373587_1375606_+	chemotaxis protein CheA	NA	NA	NA	NA	NA
AYQ72242.1|1375635_1377228_+	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	29.5	9.8e-16
AYQ72243.1|1377255_1378053_+	protein-glutamate O-methyltransferase CheR	NA	NA	NA	NA	NA
AYQ72244.1|1379239_1379449_+|coat	spore coat protein	coat	NA	NA	NA	NA
AYQ72245.1|1379465_1379828_+|coat	spore coat protein	coat	NA	NA	NA	NA
AYQ72246.1|1379838_1380975_+	glutathione-dependent formaldehyde dehydrogenase	NA	E3SJ82	Synechococcus_phage	29.0	1.6e-12
AYQ72247.1|1380971_1381202_+	hypothetical protein	NA	NA	NA	NA	NA
AYQ72248.1|1381213_1381507_+|coat	spore coat protein	coat	NA	NA	NA	NA
>prophage 2
CP033433	Cohnella sp. 18JY8-7 chromosome, complete genome	5289049	1713097	1722418	5289049		Bacillus_phage(66.67%)	7	NA	NA
AYQ75547.1|1713097_1714912_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	56.5	2.7e-155
AYQ72524.1|1714908_1715583_+	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	64.0	9.1e-80
AYQ75548.1|1715801_1716815_+	sensor histidine kinase	NA	W8CYF6	Bacillus_phage	51.0	2.5e-81
AYQ75549.1|1716782_1717355_-	LuxR family transcriptional regulator	NA	NA	NA	NA	NA
AYQ72525.1|1717227_1719618_+	response regulator	NA	A0A1V0SGX0	Hokovirus	29.6	3.6e-46
AYQ75550.1|1719710_1720415_+	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	29.9	2.1e-26
AYQ72526.1|1720522_1722418_+	EAL domain-containing protein	NA	G3MA91	Bacillus_virus	23.8	9.3e-05
>prophage 3
CP033433	Cohnella sp. 18JY8-7 chromosome, complete genome	5289049	1996561	2005383	5289049		Staphylococcus_phage(50.0%)	10	NA	NA
AYQ72765.1|1996561_1997626_-	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	35.1	5.9e-25
AYQ72766.1|1997751_1998297_-	sporulation protein YtfJ	NA	NA	NA	NA	NA
AYQ72767.1|1998425_1999076_-	DUF2953 domain-containing protein	NA	NA	NA	NA	NA
AYQ72768.1|1999141_1999759_-	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	32.5	7.9e-14
AYQ72769.1|1999727_2000519_-	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	34.3	3.7e-08
AYQ75576.1|2000571_2001042_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	56.3	1.5e-41
AYQ72770.1|2001047_2002331_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	54.1	3.2e-118
AYQ75577.1|2002351_2003017_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	43.4	3.1e-40
AYQ72771.1|2003022_2004144_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	38.8	6.8e-56
AYQ72772.1|2004957_2005383_-	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	44.9	2.1e-21
>prophage 4
CP033433	Cohnella sp. 18JY8-7 chromosome, complete genome	5289049	2518991	2587393	5289049	coat,protease,tRNA	Moraxella_phage(16.67%)	60	NA	NA
AYQ73205.1|2518991_2519867_-|protease	Zn-dependent protease	protease	NA	NA	NA	NA
AYQ73206.1|2519859_2520897_-	M23 family metallopeptidase	NA	NA	NA	NA	NA
AYQ73207.1|2521009_2522158_-	rod shape-determining protein RodA	NA	NA	NA	NA	NA
AYQ73208.1|2522165_2522960_-	septum site-determining protein MinD	NA	NA	NA	NA	NA
AYQ73209.1|2522964_2523627_-	septum site-determining protein MinC	NA	NA	NA	NA	NA
AYQ73210.1|2523702_2524233_-	rod shape-determining protein MreD	NA	NA	NA	NA	NA
AYQ73211.1|2524229_2525084_-	rod shape-determining protein MreC	NA	NA	NA	NA	NA
AYQ73212.1|2525152_2526184_-	rod shape-determining protein	NA	NA	NA	NA	NA
AYQ73213.1|2526224_2526914_-	JAB domain-containing protein	NA	NA	NA	NA	NA
AYQ73214.1|2526988_2527594_-	septum formation inhibitor Maf	NA	NA	NA	NA	NA
AYQ73215.1|2527616_2527859_-	DUF4321 domain-containing protein	NA	NA	NA	NA	NA
AYQ73216.1|2528046_2529426_-	SPOR domain-containing protein	NA	NA	NA	NA	NA
AYQ73217.1|2529497_2530685_+|protease	serine protease	protease	A0A1B1IRD3	uncultured_Mediterranean_phage	31.4	1.2e-05
AYQ73218.1|2530763_2532149_-	UDP-N-acetylmuramate--L-alanine ligase	NA	NA	NA	NA	NA
AYQ73219.1|2532156_2533536_-	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
AYQ73220.1|2533552_2536225_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	41.7	3.9e-166
AYQ73221.1|2536956_2538342_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA	NA
AYQ73222.1|2538442_2539744_-	glutamate-1-semialdehyde-2,1-aminomutase	NA	NA	NA	NA	NA
AYQ73223.1|2539827_2540490_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
AYQ73224.1|2540522_2541521_-	porphobilinogen synthase	NA	NA	NA	NA	NA
AYQ73225.1|2541526_2543074_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
AYQ73226.1|2543079_2544021_-	hydroxymethylbilane synthase	NA	NA	NA	NA	NA
AYQ73227.1|2544031_2544697_-	bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase	NA	NA	NA	NA	NA
AYQ73228.1|2544714_2545536_-	cytochrome C assembly protein	NA	NA	NA	NA	NA
AYQ75619.1|2545590_2546985_-|tRNA	glutamyl-tRNA reductase	tRNA	NA	NA	NA	NA
AYQ73229.1|2547201_2547600_-	adenosylmethionine decarboxylase	NA	A0A222YVV4	Synechococcus_phage	36.2	7.6e-18
AYQ73230.1|2547965_2548556_-	non-ribosomal peptide synthetase module	NA	NA	NA	NA	NA
AYQ73231.1|2548720_2549365_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA	NA
AYQ73232.1|2549393_2551841_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	41.1	3.8e-168
AYQ73233.1|2552038_2553838_-|protease	ATP-dependent protease LonB	protease	A0A0R6PGP8	Moraxella_phage	36.8	2.4e-18
AYQ73234.1|2553935_2554886_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AYQ73235.1|2554974_2556582_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
AYQ73236.1|2556665_2557763_-	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA	NA
AYQ73237.1|2557829_2559089_-|protease	ATP-dependent protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	65.0	2.6e-149
AYQ73238.1|2559101_2559692_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	58.3	5.5e-57
AYQ73239.1|2559876_2561166_-	trigger factor	NA	NA	NA	NA	NA
AYQ73240.1|2561319_2562243_-	HEAT repeat domain-containing protein	NA	NA	NA	NA	NA
AYQ75620.1|2562594_2564412_-	adenine deaminase	NA	NA	NA	NA	NA
AYQ73241.1|2564860_2565862_+	HD domain-containing protein	NA	NA	NA	NA	NA
AYQ73242.1|2565879_2566560_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
AYQ73243.1|2566668_2567577_+	YihY/virulence factor BrkB family protein	NA	H9YQA7	environmental_Halophage	37.6	7.8e-10
AYQ73244.1|2567629_2568061_+	EamA family transporter	NA	NA	NA	NA	NA
AYQ73245.1|2569385_2569736_-	hypothetical protein	NA	NA	NA	NA	NA
AYQ73246.1|2569866_2571723_+	asparagine synthase (glutamine-hydrolyzing)	NA	A0A1V0SGM7	Hokovirus	24.4	2.8e-30
AYQ73247.1|2571784_2572429_-	XTP/dITP diphosphatase	NA	A0A2P1DNP2	Cassava_brown_streak_virus	28.7	3.1e-13
AYQ73248.1|2572425_2573172_-	ribonuclease PH	NA	NA	NA	NA	NA
AYQ73249.1|2573270_2574407_-	hypothetical protein	NA	NA	NA	NA	NA
AYQ73250.1|2574577_2575135_+	phosphatidylglycerophosphatase A	NA	G3MBC5	Bacillus_virus	49.7	3.8e-39
AYQ73251.1|2575195_2576167_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
AYQ73252.1|2576173_2577244_-	type 2 isopentenyl-diphosphate Delta-isomerase	NA	NA	NA	NA	NA
AYQ73253.1|2577379_2578747_+	YheC/YheD family protein	NA	NA	NA	NA	NA
AYQ73254.1|2578721_2579867_+	YheC/YheD family protein	NA	NA	NA	NA	NA
AYQ73255.1|2579847_2581224_+	YheC/YheD family protein	NA	NA	NA	NA	NA
AYQ73256.1|2581223_2582381_+	YheC/YheD family protein	NA	NA	NA	NA	NA
AYQ73257.1|2582390_2583578_+	YheC/YheD family protein	NA	NA	NA	NA	NA
AYQ73258.1|2583655_2584336_-	HAD family hydrolase	NA	NA	NA	NA	NA
AYQ73259.1|2584424_2585861_-	flotillin family protein	NA	A0A2P1EM85	Moumouvirus	26.6	3.3e-10
AYQ73260.1|2585879_2586404_-	hypothetical protein	NA	NA	NA	NA	NA
AYQ73261.1|2586577_2587147_-|coat	spore coat protein CotJC	coat	NA	NA	NA	NA
AYQ75621.1|2587159_2587393_-|coat	spore coat protein CotJB	coat	NA	NA	NA	NA
>prophage 5
CP033433	Cohnella sp. 18JY8-7 chromosome, complete genome	5289049	4609442	4616237	5289049		Lactococcus_phage(33.33%)	7	NA	NA
AYQ75766.1|4609442_4612226_+	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	39.7	1.7e-87
AYQ75767.1|4612353_4612650_-	hypothetical protein	NA	S6B1N1	Thermus_phage	39.2	3.2e-13
AYQ74872.1|4612885_4613086_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	67.7	3.4e-19
AYQ74873.1|4613149_4613380_+	hypothetical protein	NA	NA	NA	NA	NA
AYQ74874.1|4613478_4614411_+	aspartate carbamoyltransferase	NA	A0A1J0F9B8	Only_Syngen_Nebraska_virus	47.8	9.6e-72
AYQ74875.1|4614477_4614963_+	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	54.9	3.5e-41
AYQ74876.1|4615793_4616237_+	HNH endonuclease	NA	A0A2H4JGM1	uncultured_Caudovirales_phage	50.9	1.2e-08
>prophage 6
CP033433	Cohnella sp. 18JY8-7 chromosome, complete genome	5289049	5218799	5229070	5289049		Mollivirus(25.0%)	9	NA	NA
AYQ75344.1|5218799_5220095_+	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	31.2	4.5e-19
AYQ75345.1|5220104_5221013_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0M4JBD3	Mollivirus	35.5	1.6e-42
AYQ75346.1|5221389_5221632_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	A0A1D7SRI3	Cyanophage	41.6	6.7e-09
AYQ75347.1|5221639_5222332_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
AYQ75348.1|5222309_5224553_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	41.8	1.2e-163
AYQ75349.1|5224537_5226055_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.3	3.3e-53
AYQ75350.1|5226192_5227239_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	48.3	2.2e-72
AYQ75351.1|5227235_5227850_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.0	3.3e-28
AYQ75352.1|5227891_5229070_+	phosphoribosylaminoimidazolecarboxamide formyltransferase	NA	S4VT61	Pandoravirus	25.1	1.5e-16
