The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP033344	Salmonella enterica subsp. enterica serovar Oranienburg strain CFSAN076211 chromosome, complete genome	4651134	1409115	1481901	4651134	protease,terminase,tail,lysis,tRNA,head,holin	Salmonella_phage(73.17%)	102	NA	NA
AYP85284.1|1409115_1410054_+|protease	omptin family outer membrane protease PgtE	protease	NA	NA	NA	NA
AYP85285.1|1410427_1410748_+	helicase	NA	NA	NA	NA	NA
AYP85286.1|1411660_1412467_+	DUF2971 domain-containing protein	NA	NA	NA	NA	NA
AYP85287.1|1412477_1413494_+	DUF2971 domain-containing protein	NA	NA	NA	NA	NA
AYP85288.1|1414896_1415100_-	hypothetical protein	NA	C6ZR24	Salmonella_phage	97.0	2.1e-32
AYP85289.1|1415257_1415530_-	hypothetical protein	NA	A0A2H4FNB3	Salmonella_phage	96.7	5.0e-37
AYP85290.1|1416263_1416557_-	hypothetical protein	NA	A0A1V0E5L2	Salmonella_phage	96.9	2.7e-49
AYP85291.1|1416599_1417355_-	hypothetical protein	NA	H6WRY1	Salmonella_phage	99.6	4.2e-150
AYP85292.1|1417354_1417855_-	ead/Ea22-like family protein	NA	C6ZR30	Salmonella_phage	89.0	6.3e-70
AYP88321.1|1417830_1418232_-	ParB/RepB/Spo0J family partition protein	NA	S4TTI6	Salmonella_phage	98.5	1.2e-71
AYP85293.1|1418228_1418591_-	Eaf protein	NA	T1SA95	Salmonella_phage	91.4	4.7e-59
AYP85294.1|1418587_1419280_-	HNH endonuclease	NA	C6ZR31	Salmonella_phage	90.0	2.3e-115
AYP88320.1|1419267_1419438_-	DUF2737 family protein	NA	A0A0N7CAQ8	Salmonella_phage	89.3	1.4e-21
AYP85295.1|1419448_1419742_-	DUF2856 family protein	NA	A0A0N7CAQ6	Salmonella_phage	93.8	3.4e-47
AYP85296.1|1419788_1420073_-	sigma-70 family RNA polymerase sigma factor	NA	Q76H41	Enterobacteria_phage	96.8	5.7e-44
AYP85297.1|1420072_1420780_-	recombinase	NA	A0A2H4FN95	Salmonella_phage	96.2	1.9e-133
AYP85298.1|1420788_1420977_-	hypothetical protein	NA	C6ZR38	Salmonella_phage	95.2	1.4e-27
AYP85299.1|1420973_1421087_-	host cell division inhibitory peptide Kil	NA	C6ZR39	Salmonella_phage	100.0	7.8e-13
AYP88322.1|1421079_1421241_-|protease	protease FtsH-inhibitory lysogeny factor CIII	protease	E7C9Q3	Salmonella_phage	100.0	4.9e-24
AYP85300.1|1421310_1421622_-	superinfection exclusion protein	NA	E7C9Q4	Salmonella_phage	100.0	4.2e-56
AYP85301.1|1421897_1422194_-	hypothetical protein	NA	K7PH98	Enterobacteria_phage	72.4	1.9e-34
AYP85302.1|1422227_1422728_-	HNH endonuclease	NA	A5H1L2	Xanthomonas_virus	44.5	1.4e-32
AYP85303.1|1422806_1423109_-	regulator	NA	I6S5Z3	Salmonella_phage	95.0	4.5e-47
AYP88323.1|1423463_1424126_-	LexA family transcriptional regulator	NA	A0A0M4QWY1	Salmonella_phage	100.0	1.7e-126
AYP85304.1|1424244_1424460_+	XRE family transcriptional regulator	NA	A0A0M4RTV8	Salmonella_phage	100.0	4.1e-34
AYP85305.1|1424567_1424846_+	hypothetical protein	NA	Q5G8T2	Enterobacteria_phage	100.0	2.5e-44
AYP85306.1|1425028_1425835_+	replication of DNA	NA	K7P7N8	Enterobacteria_phage	81.2	1.2e-118
AYP85307.1|1425831_1427208_+	replicative DNA helicase	NA	A0A1V0E5J4	Salmonella_phage	98.0	3.2e-249
AYP85308.1|1427278_1427542_+	hypothetical protein	NA	I6R992	Salmonella_phage	64.4	6.1e-24
AYP88324.1|1427496_1427754_+	restriction alleviation protein, Lar family	NA	Q8SC44	Stx2_converting_phage	50.6	4.4e-11
AYP85309.1|1427710_1428157_+	recombination protein NinB	NA	I6R0N7	Salmonella_phage	98.0	7.8e-80
AYP85310.1|1428153_1428330_+	NinE family protein	NA	A0A220NRK6	Escherichia_phage	96.6	3.9e-27
AYP85311.1|1428332_1428734_+	hypothetical protein	NA	G9L690	Escherichia_phage	86.5	7.1e-64
AYP85312.1|1428726_1428903_+	protein ninF	NA	K7P6R5	Enterobacteria_phage	93.0	1.4e-24
AYP85313.1|1428895_1429132_+	hypothetical protein	NA	C6ZR59	Salmonella_phage	93.6	1.3e-36
AYP85314.1|1429112_1429583_+	hypothetical protein	NA	C6ZR60	Salmonella_phage	96.2	1.3e-88
AYP85315.1|1429570_1429753_+	hypothetical protein	NA	C6ZR61	Salmonella_phage	98.3	7.2e-24
AYP85316.1|1429749_1430514_+	antitermination protein	NA	Q5G8R6	Enterobacteria_phage	92.9	8.0e-133
AYP85317.1|1430549_1430819_+	hypothetical protein	NA	M1E3N9	Enterobacteria_phage	82.5	6.0e-19
AYP85318.1|1430954_1431278_+|holin	phage holin, lambda family	holin	Q5G8R5	Enterobacteria_phage	100.0	6.5e-52
AYP85319.1|1431264_1431702_+	lysozyme	NA	Q5G8R3	Enterobacteria_phage	97.9	6.3e-74
AYP85320.1|1431698_1432136_+|lysis	lysis protein	lysis	A0A0N6WGE8	Salmonella_phage	94.5	6.1e-69
AYP88325.1|1432170_1432362_+	hypothetical protein	NA	A0A1V0E5I0	Salmonella_phage	92.1	2.1e-26
AYP85321.1|1432348_1433035_+	hypothetical protein	NA	A0A192Y918	Salmonella_phage	100.0	1.6e-124
AYP85322.1|1433470_1433902_+|terminase	terminase small subunit	terminase	A0A1V0E5Q4	Salmonella_phage	100.0	7.6e-72
AYP85323.1|1433885_1435205_+|terminase	PBSX family phage terminase large subunit	terminase	H6WRS9	Salmonella_phage	99.1	1.3e-260
AYP85324.1|1435337_1436690_+	DUF1073 domain-containing protein	NA	H6WRT0	Salmonella_phage	100.0	1.0e-260
AYP85325.1|1436643_1437603_+|head	phage head morphogenesis protein	head	H6WRT1	Salmonella_phage	98.1	2.8e-175
AYP85326.1|1437618_1438881_+	hypothetical protein	NA	H6WRT2	Salmonella_phage	99.8	5.2e-238
AYP85327.1|1438893_1439343_+	hypothetical protein	NA	H6WRT3	Salmonella_phage	100.0	1.6e-77
AYP85328.1|1439360_1440437_+	hypothetical protein	NA	I6RSK5	Salmonella_phage	100.0	2.4e-207
AYP85329.1|1440446_1440626_+	glycoprotein	NA	I6R9A3	Salmonella_phage	100.0	6.8e-27
AYP85330.1|1440677_1441079_+	hypothetical protein	NA	I6S619	Salmonella_phage	97.7	7.8e-71
AYP85331.1|1441078_1441267_+	hypothetical protein	NA	I6R0P9	Salmonella_phage	100.0	1.4e-30
AYP85332.1|1441250_1441613_+	hypothetical protein	NA	I6S1Q5	Salmonella_phage	95.8	1.3e-64
AYP85333.1|1441620_1442016_+	hypothetical protein	NA	Q5G8X5	Enterobacteria_phage	100.0	7.2e-69
AYP85334.1|1442012_1442399_+	hypothetical protein	NA	Q5G8X4	Enterobacteria_phage	96.9	1.5e-66
AYP85335.1|1442414_1443152_+	hypothetical protein	NA	Q5G8X3	Enterobacteria_phage	98.8	2.7e-130
AYP85336.1|1443196_1443850_+	hypothetical protein	NA	H6WRU2	Salmonella_phage	99.5	1.3e-120
AYP85337.1|1444071_1444800_+	DNA-binding protein	NA	H6WRU3	Salmonella_phage	100.0	3.1e-142
AYP85338.1|1444821_1445154_-	Arc family DNA-binding protein	NA	A0A0P0ZBD1	Stx2-converting_phage	45.7	4.1e-09
AYP85339.1|1445246_1445417_+	Arc family DNA-binding protein	NA	I6R9A8	Salmonella_phage	87.5	5.0e-19
AYP85340.1|1445409_1446384_+	phage antirepressor Ant	NA	I6S627	Salmonella_phage	97.2	6.7e-185
AYP85341.1|1446502_1447144_+	hypothetical protein	NA	A0A2H4J0E0	uncultured_Caudovirales_phage	40.8	9.1e-05
AYP85342.1|1447203_1447506_+	hypothetical protein	NA	H6WRU5	Salmonella_phage	90.0	4.8e-33
AYP85343.1|1447526_1447856_-	Arc family DNA-binding protein	NA	H6WRU6	Salmonella_phage	97.2	1.2e-48
AYP85344.1|1448115_1448982_+	hypothetical protein	NA	B6SD57	Bacteriophage	53.2	7.8e-68
AYP85345.1|1449046_1449835_+	phage antirepressor Ant	NA	H6WRU9	Salmonella_phage	100.0	5.2e-127
AYP85346.1|1449834_1450107_+	hypothetical protein	NA	H6WRV0	Salmonella_phage	98.9	2.2e-45
AYP85347.1|1450241_1450616_+	hypothetical protein	NA	H6WRV1	Salmonella_phage	99.2	1.8e-66
AYP85348.1|1450608_1450911_+	hypothetical protein	NA	H6WRV2	Salmonella_phage	100.0	3.3e-42
AYP88326.1|1451065_1451317_+	hypothetical protein	NA	H6WRV3	Salmonella_phage	100.0	2.2e-39
AYP85349.1|1451330_1451645_+	hypothetical protein	NA	H6WRV4	Salmonella_phage	99.0	1.1e-51
AYP85350.1|1451705_1453889_+	hypothetical protein	NA	H6WRV7	Salmonella_phage	96.0	4.8e-311
AYP85351.1|1453918_1454140_+	hypothetical protein	NA	NA	NA	NA	NA
AYP85352.1|1454196_1454544_+|tail	phage tail protein	tail	A0A1V0E5N3	Salmonella_phage	90.4	1.7e-58
AYP85353.1|1454554_1454761_+	hypothetical protein	NA	H6WRV9	Salmonella_phage	100.0	5.3e-31
AYP85354.1|1454729_1454945_-	hypothetical protein	NA	H6WRW0	Salmonella_phage	100.0	2.1e-30
AYP88327.1|1455110_1455815_+|tail	phage minor tail protein L	tail	H6WRW1	Salmonella_phage	100.0	8.4e-137
AYP85355.1|1455814_1456534_+|tail	phage tail protein	tail	Q5G8W2	Enterobacteria_phage	93.3	3.9e-137
AYP85356.1|1456461_1457004_+|tail	tail assembly protein	tail	I6RSM0	Salmonella_phage	95.2	6.6e-65
AYP85357.1|1457013_1460190_+	host specificity protein J	NA	I6R9B3	Salmonella_phage	93.7	0.0e+00
AYP85358.1|1460198_1461158_+	hypothetical protein	NA	H6WRW5	Salmonella_phage	99.7	1.6e-183
AYP85359.1|1461168_1462467_+|tail	phage tail protein	tail	A0A1V0E5M2	Salmonella_phage	99.8	8.3e-247
AYP85360.1|1462538_1463708_-	DUF4102 domain-containing protein	NA	I6R0M2	Salmonella_phage	99.0	7.7e-228
AYP85361.1|1464021_1464963_-	hypothetical protein	NA	E7DYY8	Enterobacteria_phage	88.2	1.4e-147
AYP85362.1|1465251_1466007_+	phospholipid-binding lipoprotein MlaA	NA	NA	NA	NA	NA
AYP85363.1|1466067_1467375_-	long-chain fatty acid transporter	NA	NA	NA	NA	NA
AYP85364.1|1467745_1468030_+	DUF406 family protein	NA	NA	NA	NA	NA
AYP85365.1|1468206_1469517_+	acetyl-CoA C-acyltransferase FadI	NA	NA	NA	NA	NA
AYP85366.1|1469516_1471655_+	fatty acid oxidation complex subunit alpha FadJ	NA	NA	NA	NA	NA
AYP85367.1|1471872_1472358_+	phosphohistidine phosphatase SixA	NA	NA	NA	NA	NA
AYP85368.1|1472457_1473009_-	endonuclease SmrB	NA	NA	NA	NA	NA
AYP85369.1|1473174_1474107_+	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
AYP85370.1|1474142_1475228_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	47.8	9.1e-90
AYP85371.1|1475231_1476056_+	penicillin-insensitive murein endopeptidase	NA	NA	NA	NA	NA
AYP85372.1|1476055_1476865_+	hypothetical protein	NA	NA	NA	NA	NA
AYP85373.1|1476864_1477413_+	elongation factor P hydroxylase	NA	NA	NA	NA	NA
AYP85374.1|1477445_1477721_+	YfcL family protein	NA	NA	NA	NA	NA
AYP85375.1|1477772_1479833_-|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	tRNA	NA	NA	NA	NA
AYP85376.1|1479932_1481147_+	beta-ketoacyl-ACP synthase I	NA	NA	NA	NA	NA
AYP85377.1|1481244_1481901_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
>prophage 2
CP033344	Salmonella enterica subsp. enterica serovar Oranienburg strain CFSAN076211 chromosome, complete genome	4651134	1693474	1702647	4651134	tRNA	Enterobacteria_phage(66.67%)	9	NA	NA
AYP85578.1|1693474_1694422_+	ABC transporter ATP-binding protein	NA	F2Y1V5	Organic_Lake_phycodnavirus	27.8	3.7e-10
AYP85579.1|1694405_1695137_+	ABC transporter permease	NA	NA	NA	NA	NA
AYP85580.1|1695117_1695225_-	protein YohO	NA	NA	NA	NA	NA
AYP85581.1|1695284_1696016_-	transcriptional regulator	NA	Q9EYF2	Enterobacteria_phage	87.9	4.5e-101
AYP88335.1|1696241_1697927_+	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	91.1	2.4e-278
AYP85582.1|1697923_1698643_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AYP85583.1|1698689_1699157_+	DUF1456 family protein	NA	Q9EYF4	Enterobacteria_phage	90.3	3.9e-74
AYP85584.1|1699914_1700373_-	DUF1307 domain-containing protein	NA	Q9EYF5	Enterobacteria_phage	73.2	7.6e-54
AYP85585.1|1700613_1702647_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SDF2	Indivirus	27.6	6.1e-55
>prophage 3
CP033344	Salmonella enterica subsp. enterica serovar Oranienburg strain CFSAN076211 chromosome, complete genome	4651134	1881426	1888680	4651134		Morganella_phage(33.33%)	8	NA	NA
AYP85750.1|1881426_1881846_+	DNA polymerase V subunit UmuD	NA	A0A1W6JNS2	Morganella_phage	60.5	8.5e-36
AYP85751.1|1881848_1883117_+	translesion error-prone DNA polymerase V subunit UmuC	NA	I6RSM4	Salmonella_phage	91.9	2.4e-227
AYP85752.1|1883571_1883784_+	cold-shock protein CspJ	NA	A0A1W6JNX5	Morganella_phage	70.0	3.9e-21
AYP88342.1|1883794_1883983_+	cold-shock protein	NA	NA	NA	NA	NA
AYP85753.1|1884243_1885440_-	porin OmpS1	NA	Q1MVN1	Enterobacteria_phage	56.9	1.5e-109
AYP85754.1|1886089_1886389_+	hypothetical protein	NA	NA	NA	NA	NA
AYP85755.1|1886480_1887176_+	phosphohydrolase	NA	A0A1D6Y7U0	Golden_Marseillevirus	27.1	2.8e-07
AYP85756.1|1887249_1888680_+	DNA cytosine methyltransferase	NA	E5E3X6	Burkholderia_phage	57.5	3.5e-105
>prophage 4
CP033344	Salmonella enterica subsp. enterica serovar Oranienburg strain CFSAN076211 chromosome, complete genome	4651134	2176473	2183136	4651134		Salmonella_phage(33.33%)	9	NA	NA
AYP86042.1|2176473_2177280_-	peptide ABC transporter ATP-binding protein SapF	NA	G3M9Y6	Bacillus_virus	27.4	4.6e-14
AYP86043.1|2177281_2178274_-	peptide ABC transporter ATP-binding protein SapD	NA	NA	NA	NA	NA
AYP86044.1|2178273_2179164_-	peptide ABC transporter permease SapC	NA	NA	NA	NA	NA
AYP86045.1|2179987_2180710_-	hypothetical protein	NA	A0A0P0ZCT1	Stx2-converting_phage	38.9	3.3e-35
AYP86046.1|2181180_2181363_+	hypothetical protein	NA	S4TSR3	Salmonella_phage	77.6	1.0e-22
AYP86047.1|2181612_2181753_+	pertussis toxin subunit	NA	A0A0U2KD26	Escherichia_phage	77.1	6.5e-09
AYP86048.1|2181791_2182091_+	pertussis toxin subunit	NA	A0A0U2KD26	Escherichia_phage	54.3	3.2e-13
AYP86049.1|2182017_2182443_+	subtilase cytotoxin subunit B-like protein	NA	NA	NA	NA	NA
AYP86050.1|2182821_2183136_+	recombinase family protein	NA	A0A1S6L009	Salmonella_phage	86.1	4.3e-40
>prophage 5
CP033344	Salmonella enterica subsp. enterica serovar Oranienburg strain CFSAN076211 chromosome, complete genome	4651134	2652792	2657196	4651134		Escherichia_phage(50.0%)	6	NA	NA
AYP86512.1|2652792_2653032_+	virulence protein MsgA	NA	K7P6H1	Enterobacteria_phage	88.6	8.5e-33
AYP88377.1|2653904_2654714_+	cytolethal distending toxin subunit B family protein	NA	A5LH53	Enterobacteria_phage	50.0	2.1e-62
AYP86513.1|2654786_2655164_+	DUF1353 domain-containing protein	NA	I1TQ41	Pseudomonas_phage	38.4	2.2e-14
AYP86514.1|2655311_2655854_-	hypothetical protein	NA	A0A0U2S643	Escherichia_phage	67.0	6.2e-71
AYP86515.1|2656037_2656766_-	pertussis-like toxin subunit ArtA	NA	A0A0U2KD26	Escherichia_phage	52.5	1.6e-61
AYP86516.1|2656782_2657196_-	subtilase cytotoxin subunit B	NA	A0A0U2KD34	Escherichia_phage	37.7	7.1e-19
