The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP033105	Pseudomonas sp. LTJR-52 chromosome, complete genome	5539211	2253347	2260095	5539211	tRNA	uncultured_Caudovirales_phage(83.33%)	9	NA	NA
AYN94367.1|2253347_2254628_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	45.4	2.2e-98
AYN94368.1|2254627_2256019_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
AYN94369.1|2256015_2257023_-	glutathione S-transferase family protein	NA	NA	NA	NA	NA
AYN94370.1|2257053_2258025_-	glycosyl transferase family protein	NA	A0A2H4JBY5	uncultured_Caudovirales_phage	66.4	1.9e-123
AYN94371.1|2258021_2258336_-	TusE/DsrC/DsvC family sulfur relay protein	NA	A0A2H4J8B6	uncultured_Caudovirales_phage	74.7	2.6e-37
AYN94372.1|2258332_2258632_-	sulfurtransferase complex subunit TusB	NA	NA	NA	NA	NA
AYN94373.1|2258628_2258988_-	sulfurtransferase complex subunit TusC	NA	A0A2H4J8C0	uncultured_Caudovirales_phage	62.5	2.4e-31
AYN94374.1|2258987_2259380_-	sulfurtransferase complex subunit TusD	NA	A0A2H4JA39	uncultured_Caudovirales_phage	70.3	5.9e-47
AYN94375.1|2259426_2260095_-	Bax inhibitor-1/YccA family protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	74.4	3.0e-83
>prophage 2
CP033105	Pseudomonas sp. LTJR-52 chromosome, complete genome	5539211	2264040	2302564	5539211	tail,integrase,head,coat,terminase	uncultured_Caudovirales_phage(64.29%)	63	2263913:2263971	2309300:2309358
2263913:2263971	attL	GGGACTTAAAATCCCTCGGAGGAAACTCCGTGCCGGTTCGATTCCGGCTCCGGGCACCA	NA	NA	NA	NA
AYN94379.1|2264040_2265072_-|integrase	integrase	integrase	C8CLF4	Xylella_phage	57.1	1.2e-102
AYN94380.1|2265074_2265281_-	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
AYN94381.1|2265325_2265877_-	hypothetical protein	NA	NA	NA	NA	NA
AYN94382.1|2266425_2266695_-	hypothetical protein	NA	H2BDE3	Pseudomonas_virus	45.3	7.7e-06
AYN94383.1|2266804_2267056_-	hypothetical protein	NA	NA	NA	NA	NA
AYN94384.1|2267048_2267585_-	hypothetical protein	NA	NA	NA	NA	NA
AYN94385.1|2267577_2267883_-	hypothetical protein	NA	NA	NA	NA	NA
AYN94386.1|2267958_2268285_-	hypothetical protein	NA	W6MWX0	Pseudomonas_phage	45.1	6.6e-12
AYN94387.1|2268281_2268473_-	hypothetical protein	NA	NA	NA	NA	NA
AYN94388.1|2268469_2269312_-	DNA cytosine methyltransferase	NA	Q6J1P4	Burkholderia_virus	55.7	1.9e-103
AYN94389.1|2269320_2269527_-	hypothetical protein	NA	NA	NA	NA	NA
AYN94390.1|2269784_2270243_-	single-stranded DNA-binding protein	NA	A0A0S2SY36	Pseudomonas_phage	69.8	6.4e-53
AYN97231.1|2270252_2270828_-	recombinase	NA	A0A1B2ANV1	Pseudoalteromonas_phage	61.9	2.1e-40
AYN94391.1|2270814_2271333_-	HNH endonuclease	NA	A0A2I7RQ41	Vibrio_phage	34.9	7.3e-21
AYN94392.1|2271379_2271883_-	hypothetical protein	NA	A0A0S2SY59	Pseudomonas_phage	35.8	4.8e-17
AYN94393.1|2272037_2272220_-	DUF1382 family protein	NA	A0A2H4J9M2	uncultured_Caudovirales_phage	51.9	1.5e-05
AYN94394.1|2272216_2272432_-	hypothetical protein	NA	NA	NA	NA	NA
AYN94395.1|2272447_2272702_-	hypothetical protein	NA	NA	NA	NA	NA
AYN97232.1|2272844_2273090_-	hypothetical protein	NA	V5JVK6	Pseudomonas_phage	66.2	4.1e-22
AYN94396.1|2273305_2273503_-	hypothetical protein	NA	NA	NA	NA	NA
AYN94397.1|2273643_2273922_-	hypothetical protein	NA	A0A2H4J103	uncultured_Caudovirales_phage	96.7	3.9e-45
AYN94398.1|2274343_2274583_-	DUF1654 domain-containing protein	NA	A0A2K8HZW3	Pseudomonas_phage	31.8	6.8e-06
AYN97233.1|2274658_2275408_-	peptidase S24	NA	A0A2H4J8I0	uncultured_Caudovirales_phage	51.6	9.2e-57
AYN94399.1|2275523_2275727_+	XRE family transcriptional regulator	NA	A0A2H4JF66	uncultured_Caudovirales_phage	67.2	5.0e-18
AYN94400.1|2275729_2276038_+	transcriptional regulator	NA	A0A2H4J960	uncultured_Caudovirales_phage	68.0	1.0e-30
AYN94401.1|2277110_2277890_+	hypothetical protein	NA	A0A1B0VMD9	Pseudomonas_phage	54.4	9.5e-65
AYN94402.1|2277886_2278084_+	hypothetical protein	NA	NA	NA	NA	NA
AYN94403.1|2278080_2278359_+	hypothetical protein	NA	NA	NA	NA	NA
AYN94404.1|2278355_2278547_+	hypothetical protein	NA	A0A2H4J858	uncultured_Caudovirales_phage	93.7	2.7e-29
AYN94405.1|2278543_2278948_+	NinB family protein	NA	A0A059VG13	Pseudomonas_phage	58.7	1.5e-37
AYN94406.1|2278944_2279145_+	hypothetical protein	NA	A0A2H4IY74	uncultured_Caudovirales_phage	55.7	5.9e-11
AYN94407.1|2279141_2279330_+	hypothetical protein	NA	NA	NA	NA	NA
AYN94408.1|2279499_2279922_+	hypothetical protein	NA	NA	NA	NA	NA
AYN94409.1|2279918_2280545_+	ninG protein	NA	A0A2H4JGI2	uncultured_Caudovirales_phage	71.6	1.3e-72
AYN94410.1|2280583_2281081_+	hypothetical protein	NA	NA	NA	NA	NA
AYN94411.1|2281080_2281626_+	HNH endonuclease	NA	A0A0H5ARI7	Pseudomonas_phage	42.2	5.7e-32
AYN94412.1|2281834_2282203_+	hypothetical protein	NA	NA	NA	NA	NA
AYN94413.1|2282202_2282556_+	hypothetical protein	NA	A0A2H4J840	uncultured_Caudovirales_phage	58.6	1.1e-12
AYN94414.1|2282564_2283056_+	glycoside hydrolase	NA	Q6J1Q5	Burkholderia_virus	56.1	2.0e-44
AYN94415.1|2283052_2283556_+	DUF2514 domain-containing protein	NA	A0A2H4J0Y8	uncultured_Caudovirales_phage	69.2	1.7e-43
AYN94416.1|2283617_2285252_+	hypothetical protein	NA	A0A2H4J3X4	uncultured_Caudovirales_phage	68.0	3.3e-43
AYN94417.1|2285230_2285413_+	hypothetical protein	NA	NA	NA	NA	NA
AYN94418.1|2285447_2285714_-	hypothetical protein	NA	NA	NA	NA	NA
AYN94419.1|2285789_2286305_+	hypothetical protein	NA	A0A2H4J1J5	uncultured_Caudovirales_phage	31.9	4.7e-12
AYN94420.1|2286282_2287596_+|terminase	terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	58.6	1.2e-144
AYN94421.1|2287595_2289044_+	DUF4055 domain-containing protein	NA	A0A2H4J5M6	uncultured_Caudovirales_phage	95.0	5.2e-266
AYN94422.1|2289018_2290125_+|head	phage head morphogenesis protein	head	A0A2H4J831	uncultured_Caudovirales_phage	98.1	1.6e-195
AYN94423.1|2290195_2290924_+	hypothetical protein	NA	A0A2H4J0Y0	uncultured_Caudovirales_phage	67.2	7.0e-62
AYN94424.1|2290935_2291955_+|coat	coat protein	coat	A0A2H4J3W6	uncultured_Caudovirales_phage	63.4	2.6e-118
AYN94425.1|2292003_2292318_+	hypothetical protein	NA	A0A2H4J0Y2	uncultured_Caudovirales_phage	77.4	2.7e-34
AYN94426.1|2292323_2292824_+	hypothetical protein	NA	A0A2H4J970	uncultured_Caudovirales_phage	97.6	1.6e-86
AYN94427.1|2292825_2293191_+	hypothetical protein	NA	A0A2H4J5T3	uncultured_Caudovirales_phage	97.5	6.6e-61
AYN94428.1|2293187_2293418_+	hypothetical protein	NA	NA	NA	NA	NA
AYN94429.1|2293414_2293822_+	HK97 gp10 family phage protein	NA	A0A2H4J887	uncultured_Caudovirales_phage	62.8	6.3e-44
AYN94430.1|2293818_2294229_+	hypothetical protein	NA	A0A2H4J130	uncultured_Caudovirales_phage	91.2	2.3e-62
AYN94431.1|2294311_2294956_+|tail	phage tail protein	tail	A0A2H4J129	uncultured_Caudovirales_phage	74.3	2.8e-86
AYN94432.1|2294964_2295282_+	hypothetical protein	NA	A0A2H4J121	uncultured_Caudovirales_phage	97.1	9.9e-53
AYN94433.1|2295395_2295593_+	hypothetical protein	NA	A0A2H4J402	uncultured_Caudovirales_phage	95.1	3.3e-14
AYN94434.1|2295595_2298481_+|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	71.7	0.0e+00
AYN94435.1|2298477_2298963_+	DUF1833 domain-containing protein	NA	A0A2H4J983	uncultured_Caudovirales_phage	97.5	9.4e-87
AYN94436.1|2299022_2299352_+	hypothetical protein	NA	NA	NA	NA	NA
AYN94437.1|2299362_2299791_-	hypothetical protein	NA	NA	NA	NA	NA
AYN97234.1|2299855_2302564_+	hypothetical protein	NA	A0A2H4J0V9	uncultured_Caudovirales_phage	93.1	0.0e+00
2309300:2309358	attR	GGGACTTAAAATCCCTCGGAGGAAACTCCGTGCCGGTTCGATTCCGGCTCCGGGCACCA	NA	NA	NA	NA
>prophage 3
CP033105	Pseudomonas sp. LTJR-52 chromosome, complete genome	5539211	2523995	2533969	5539211		uncultured_Caudovirales_phage(62.5%)	10	NA	NA
AYN94601.1|2523995_2524889_+	hydroxymethylglutaryl-CoA lyase	NA	A0A1V0SKU2	Klosneuvirus	36.4	6.6e-46
AYN94602.1|2525365_2525836_-	heat-shock protein	NA	A0A1B1IW69	uncultured_Mediterranean_phage	40.5	4.3e-20
AYN94603.1|2526483_2526798_+	hypothetical protein	NA	NA	NA	NA	NA
AYN94604.1|2526881_2527496_-	hypothetical protein	NA	NA	NA	NA	NA
AYN94605.1|2527647_2528004_+	ArsR family transcriptional regulator	NA	A0A2H4J145	uncultured_Caudovirales_phage	60.2	4.0e-34
AYN94606.1|2528034_2529318_+	arsenic transporter	NA	A0A2H4J144	uncultured_Caudovirales_phage	80.0	3.2e-190
AYN94607.1|2529333_2529801_+	arsenate reductase ArsC	NA	A0A2H4J8A6	uncultured_Caudovirales_phage	63.9	1.6e-51
AYN97252.1|2529839_2530526_+	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	86.7	2.5e-109
AYN94608.1|2530510_2531572_-	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2H4J2Q2	uncultured_Caudovirales_phage	64.1	9.2e-103
AYN94609.1|2531746_2533969_+	GAF domain-containing protein	NA	B5LWN8	Feldmannia_species_virus	22.2	7.0e-28
>prophage 4
CP033105	Pseudomonas sp. LTJR-52 chromosome, complete genome	5539211	2950009	2958755	5539211		Escherichia_phage(50.0%)	9	NA	NA
AYN94953.1|2950009_2950939_-	dTDP-4-dehydrorhamnose reductase	NA	A0A1D8EQE2	Escherichia_phage	34.4	1.1e-32
AYN94954.1|2950935_2951472_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	62.6	5.4e-59
AYN94955.1|2951471_2952353_-	glucose-1-phosphate thymidylyltransferase	NA	K7QKA7	Escherichia_phage	65.9	3.3e-106
AYN94956.1|2952413_2953478_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	53.0	2.3e-98
AYN94957.1|2953784_2955761_-	polysaccharide biosynthesis protein	NA	A0A1V0SAI8	Catovirus	26.4	1.7e-17
AYN94958.1|2955798_2956815_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
AYN97279.1|2956816_2957794_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
AYN94959.1|2957955_2958174_-	hypothetical protein	NA	NA	NA	NA	NA
AYN94960.1|2958473_2958755_-	integration host factor subunit beta	NA	A3E2K9	Sodalis_phage	43.3	5.7e-12
