The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP022561	Pseudomonas putida strain B4 chromosome, complete genome	6011680	1083291	1091070	6011680		Thermobifida_phage(16.67%)	10	NA	NA
AYN09214.1|1083291_1084146_-	RNase adaptor protein RapZ	NA	A0A0R8VB27	Thermobifida_phage	31.9	2.4e-08
AYN09215.1|1084148_1084613_-	PTS IIA-like nitrogen-regulatory protein PtsN	NA	NA	NA	NA	NA
AYN09216.1|1084625_1084934_-	ribosome hibernation promoting factor	NA	A0A0K1LP60	Escherichia_phage	34.1	4.4e-05
AYN09217.1|1085013_1086507_-	RNA polymerase factor sigma-54	NA	NA	NA	NA	NA
AYN09218.1|1086682_1087408_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.5	8.4e-23
AYN09219.1|1087408_1087933_-	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
AYN09220.1|1087919_1088492_-	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
AYN09221.1|1088500_1089025_-	phenylphosphate carboxylase subunit delta	NA	A0A140XBD6	Dickeya_phage	48.1	6.9e-27
AYN09222.1|1089037_1090012_-	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	32.8	1.0e-36
AYN09223.1|1090260_1091070_+	phospholipid ABC transporter ATP-binding protein MlaF	NA	G9BWD6	Planktothrix_phage	32.5	7.7e-25
>prophage 2
CP022561	Pseudomonas putida strain B4 chromosome, complete genome	6011680	1374548	1476968	6011680	portal,terminase,capsid,head,transposase,tail,integrase,tRNA	Pseudomonas_phage(43.9%)	117	1403071:1403130	1439653:1439717
AYN09469.1|1374548_1376324_+|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SIS0	Klosneuvirus	26.3	5.6e-12
AYN09470.1|1376438_1377185_+	transcriptional regulator	NA	NA	NA	NA	NA
AYN09471.1|1377370_1377895_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
AYN09472.1|1378004_1378622_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
AYN09473.1|1378618_1379665_+	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	27.4	7.9e-06
AYN09474.1|1379790_1380243_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
AYN09475.1|1380245_1380941_+	protein TolQ	NA	NA	NA	NA	NA
AYN09476.1|1380955_1381408_+	protein TolR	NA	NA	NA	NA	NA
AYN09477.1|1381407_1382526_+	protein TolA	NA	NA	NA	NA	NA
AYN09478.1|1382522_1383824_+	protein TolB	NA	NA	NA	NA	NA
AYN09479.1|1383878_1384379_+	peptidoglycan-associated lipoprotein	NA	NA	NA	NA	NA
AYN09480.1|1384385_1385192_+	tol-pal system protein YbgF	NA	NA	NA	NA	NA
AYN09481.1|1385360_1386008_+	7-carboxy-7-deazaguanine synthase QueE	NA	NA	NA	NA	NA
AYN13479.1|1386007_1386700_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	36.9	7.0e-27
AYN09482.1|1386929_1387889_-	cation transporter	NA	NA	NA	NA	NA
AYN09483.1|1388031_1390098_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	43.8	5.5e-27
AYN09484.1|1390164_1391517_-	APC family permease	NA	NA	NA	NA	NA
AYN09485.1|1391963_1393472_+	DUF945 domain-containing protein	NA	NA	NA	NA	NA
AYN09486.1|1393746_1394805_+	quinolinate synthase	NA	NA	NA	NA	NA
AYN09487.1|1395115_1396552_-	peptidase M48	NA	NA	NA	NA	NA
AYN09488.1|1396674_1396914_+	SirA family protein	NA	NA	NA	NA	NA
AYN09489.1|1396934_1398005_+	AI-2E family transporter	NA	NA	NA	NA	NA
AYN09490.1|1398122_1398596_-	peroxiredoxin	NA	NA	NA	NA	NA
AYN09491.1|1398607_1399168_-	glycine cleavage system transcriptional regulator	NA	NA	NA	NA	NA
AYN09492.1|1399427_1400315_+	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
AYN09493.1|1400330_1401452_+	outer membrane protein assembly factor BamC	NA	NA	NA	NA	NA
AYN09494.1|1401452_1402211_+	MBL fold metallo-hydrolase	NA	A8ATK9	Listeria_phage	30.5	1.2e-16
AYN09495.1|1402241_1402952_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0E3HI61	Synechococcus_phage	38.0	5.1e-41
1403071:1403130	attL	ACGGATTCGAAATCCGTTGTACTGGCAACAGTACCTAGGGTTCAAATCCCTATCTCTCCG	NA	NA	NA	NA
AYN09496.1|1403243_1404221_+|integrase	integrase	integrase	W6MYA3	Pseudomonas_phage	69.8	1.6e-125
AYN09497.1|1404223_1404472_-	hypothetical protein	NA	B5WZU8	Pseudomonas_phage	57.9	4.4e-16
AYN09498.1|1404468_1404876_-	hypothetical protein	NA	NA	NA	NA	NA
AYN09499.1|1405012_1405348_-	hypothetical protein	NA	NA	NA	NA	NA
AYN09500.1|1405334_1405652_-	carbon storage regulator	NA	A0A2I7RT00	Vibrio_phage	57.9	8.7e-09
AYN09501.1|1405705_1406539_-|transposase	transposase	transposase	A0A0A0YRT7	Pseudomonas_phage	89.5	5.0e-112
AYN09502.1|1406535_1406784_-	hypothetical protein	NA	NA	NA	NA	NA
AYN09503.1|1406868_1407264_-	helix-turn-helix transcriptional regulator	NA	A0A1W6JTA9	Pseudomonas_phage	56.7	1.4e-24
AYN09504.1|1407402_1408131_-	peptidase S24	NA	K7P8B2	Enterobacteria_phage	44.4	1.1e-49
AYN09505.1|1408237_1408534_+	hypothetical protein	NA	NA	NA	NA	NA
AYN09506.1|1408731_1408965_-	hypothetical protein	NA	NA	NA	NA	NA
AYN09507.1|1409024_1409321_+	hypothetical protein	NA	NA	NA	NA	NA
AYN09508.1|1409317_1410043_+	hypothetical protein	NA	A0A1W6JTB2	Pseudomonas_phage	43.9	1.6e-45
AYN09509.1|1410039_1410432_+	hypothetical protein	NA	NA	NA	NA	NA
AYN13480.1|1410434_1410659_+	hypothetical protein	NA	A0A2H4J9B6	uncultured_Caudovirales_phage	66.7	7.0e-05
AYN09510.1|1410663_1411398_+	replication protein	NA	A0A0P0ZC04	Stx2-converting_phage	49.4	4.2e-38
AYN09511.1|1411378_1412179_+	ATP-binding protein	NA	A0A1W6JTD8	Pseudomonas_phage	50.0	6.6e-61
AYN09512.1|1412175_1413567_+	helicase DnaB	NA	A0A1W6JTB3	Pseudomonas_phage	62.0	2.3e-162
AYN09513.1|1413553_1414888_+|integrase	integrase	integrase	A0A2D1GND4	Pseudomonas_phage	47.7	7.5e-110
AYN09514.1|1414880_1415177_+	hypothetical protein	NA	NA	NA	NA	NA
AYN09515.1|1415173_1415719_+	hypothetical protein	NA	NA	NA	NA	NA
AYN09516.1|1415866_1416190_+	hypothetical protein	NA	NA	NA	NA	NA
AYN09517.1|1416249_1416612_+	chemotaxis protein	NA	A0A059VK40	Pseudomonas_phage	80.6	4.3e-36
AYN09518.1|1416617_1416947_+	hypothetical protein	NA	A0A059VJW1	Pseudomonas_phage	63.6	1.1e-09
AYN09519.1|1417002_1417215_+	hypothetical protein	NA	NA	NA	NA	NA
AYN09520.1|1417275_1417455_+	hypothetical protein	NA	NA	NA	NA	NA
AYN09521.1|1417445_1417775_+	HNH endonuclease	NA	A0A2D1GNP5	Pseudomonas_phage	54.9	4.3e-27
AYN09522.1|1417947_1418364_+|terminase	terminase	terminase	NA	NA	NA	NA
AYN09523.1|1418356_1420099_+|terminase	terminase	terminase	A0A0U4B0M7	Pseudomonas_phage	80.9	1.6e-285
AYN09524.1|1420083_1421397_+|portal	phage portal protein	portal	D0R0D3	Streptococcus_phage	35.4	3.8e-58
AYN09525.1|1421368_1422073_+	peptidase S14	NA	C7BGG9	Burkholderia_phage	56.3	1.6e-55
AYN09526.1|1422137_1423364_+|capsid	phage major capsid protein	capsid	C7BGH0	Burkholderia_phage	40.0	3.9e-73
AYN09527.1|1423416_1423650_+	hypothetical protein	NA	NA	NA	NA	NA
AYN09528.1|1423564_1424227_+	hypothetical protein	NA	NA	NA	NA	NA
AYN09529.1|1424223_1424562_+|head,tail	head-tail adaptor protein	head,tail	K7PH08	Enterobacteria_phage	51.8	6.2e-21
AYN09530.1|1424554_1425040_+	hypothetical protein	NA	A0A0U3TGT7	Pseudomonas_phage	75.9	2.8e-59
AYN09531.1|1425036_1425405_+	hypothetical protein	NA	A0A1J0GUW9	Halomonas_phage	63.9	2.1e-38
AYN09532.1|1425470_1426205_+|tail	phage tail protein	tail	H2BDC0	Pseudomonas_virus	51.0	3.0e-52
AYN09533.1|1426213_1426684_+|tail	phage tail protein	tail	K7PJU9	Enterobacteria_phage	65.4	5.4e-39
AYN09534.1|1426707_1426908_+	hypothetical protein	NA	Q9MCA3	Pseudomonas_phage	49.2	5.1e-07
AYN09535.1|1426969_1427296_+	peptidase	NA	NA	NA	NA	NA
AYN09536.1|1427343_1429770_+|tail	tail tape measure protein	tail	D4FUM0	Pseudomonas_phage	45.1	1.0e-141
AYN09537.1|1429766_1430249_+	hypothetical protein	NA	A0A2H4J983	uncultured_Caudovirales_phage	53.4	3.7e-43
AYN09538.1|1430276_1430522_-	hypothetical protein	NA	NA	NA	NA	NA
AYN09539.1|1430600_1431020_+	hypothetical protein	NA	A0A0H5AUG1	Pseudomonas_phage	60.1	3.6e-42
AYN09540.1|1430991_1434090_+	hypothetical protein	NA	A0A2H4J0V9	uncultured_Caudovirales_phage	48.7	2.9e-282
AYN09541.1|1434101_1434584_+	hypothetical protein	NA	B5WZT5	Pseudomonas_phage	51.6	1.2e-25
AYN09542.1|1436374_1437133_+	hypothetical protein	NA	NA	NA	NA	NA
AYN09543.1|1437175_1437973_+	hypothetical protein	NA	S5FV10	Shigella_phage	32.4	8.6e-21
AYN09544.1|1438092_1438581_+	glycoside hydrolase	NA	Q9MC90	Pseudomonas_phage	60.5	6.6e-48
AYN09545.1|1438577_1439072_+	hypothetical protein	NA	A0A2H4J3Q6	uncultured_Caudovirales_phage	74.8	5.3e-37
AYN09546.1|1439125_1439530_+	hypothetical protein	NA	NA	NA	NA	NA
AYN09547.1|1439768_1440041_-	DUF3077 domain-containing protein	NA	NA	NA	NA	NA
1439653:1439717	attR	ACGGATTCGAAATCCGTTGTACTGGCAACAGTACCTAGGGTTCAAATCCCTATCTCTCCGCCATA	NA	NA	NA	NA
AYN09548.1|1440176_1440440_-	hypothetical protein	NA	NA	NA	NA	NA
AYN09549.1|1440783_1441080_-	hypothetical protein	NA	NA	NA	NA	NA
AYN09550.1|1441080_1441941_+	hypothetical protein	NA	NA	NA	NA	NA
AYN09551.1|1441949_1443848_+	hypothetical protein	NA	NA	NA	NA	NA
AYN09552.1|1443858_1445067_+	hypothetical protein	NA	NA	NA	NA	NA
AYN09553.1|1445162_1445780_-	lysine transporter LysE	NA	NA	NA	NA	NA
AYN09554.1|1445970_1446162_+	DUF4223 domain-containing protein	NA	NA	NA	NA	NA
AYN09555.1|1446489_1448127_+	malate dehydrogenase (quinone)	NA	NA	NA	NA	NA
AYN09556.1|1448259_1448595_-	ArsR family transcriptional regulator	NA	NA	NA	NA	NA
AYN09557.1|1448644_1449736_+	NADH:flavin oxidoreductase/NADH oxidase	NA	NA	NA	NA	NA
AYN09558.1|1449859_1451107_-	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
AYN09559.1|1451109_1452687_-	aldehyde dehydrogenase (NADP(+))	NA	NA	NA	NA	NA
AYN09560.1|1452838_1453786_-	dihydrodipicolinate synthase family protein	NA	NA	NA	NA	NA
AYN09561.1|1453832_1454759_-	hydroxyproline-2-epimerase	NA	NA	NA	NA	NA
AYN09562.1|1454782_1456396_-	APC family permease	NA	NA	NA	NA	NA
AYN09563.1|1456773_1457547_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AYN09564.1|1457533_1458406_-	hypothetical protein	NA	NA	NA	NA	NA
AYN09565.1|1458559_1459447_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AYN09566.1|1459588_1460107_+	molybdenum cofactor biosynthesis protein B	NA	NA	NA	NA	NA
AYN09567.1|1460153_1461053_-	bestrophin	NA	NA	NA	NA	NA
AYN09568.1|1461073_1462078_-	cyclic pyranopterin monophosphate synthase	NA	NA	NA	NA	NA
AYN09569.1|1462301_1464632_+	CbbBc protein	NA	NA	NA	NA	NA
AYN09570.1|1464741_1465203_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
AYN09571.1|1465295_1466477_+	PLP-dependent transferase	NA	NA	NA	NA	NA
AYN09572.1|1466921_1467158_-	DUF465 domain-containing protein	NA	NA	NA	NA	NA
AYN09573.1|1467410_1469048_+	phosphoethanolamine transferase	NA	NA	NA	NA	NA
AYN09574.1|1469225_1470359_+	ribonuclease D	NA	NA	NA	NA	NA
AYN09575.1|1470355_1470649_+	hypothetical protein	NA	NA	NA	NA	NA
AYN09576.1|1470651_1471584_+	hydroxyacid dehydrogenase	NA	M1HTA3	Paramecium_bursaria_Chlorella_virus	28.6	3.2e-06
AYN09577.1|1471696_1472290_-	nitroreductase family protein	NA	NA	NA	NA	NA
AYN09578.1|1472435_1472885_+	YcgN family cysteine cluster protein	NA	NA	NA	NA	NA
AYN09579.1|1472926_1474135_+	hypothetical protein	NA	NA	NA	NA	NA
AYN09580.1|1474420_1474891_-	23S rRNA methyltransferase	NA	NA	NA	NA	NA
AYN09581.1|1474963_1475335_-	HNH endonuclease	NA	NA	NA	NA	NA
AYN09582.1|1475467_1475746_+	hypothetical protein	NA	NA	NA	NA	NA
AYN09583.1|1476017_1476968_+|transposase	IS110 family transposase	transposase	Q75QL1	Wolbachia_phage	36.7	4.6e-29
>prophage 3
CP022561	Pseudomonas putida strain B4 chromosome, complete genome	6011680	2115457	2124130	6011680	tRNA	uncultured_Caudovirales_phage(75.0%)	10	NA	NA
AYN10079.1|2115457_2116738_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	54.9	4.5e-96
AYN10080.1|2116738_2118130_+	siroheme synthase	NA	NA	NA	NA	NA
AYN10081.1|2118235_2119195_-	glutathione-dependent reductase	NA	NA	NA	NA	NA
AYN10082.1|2119289_2120291_-	hypothetical protein	NA	A0A2H4JBY5	uncultured_Caudovirales_phage	80.5	8.0e-157
AYN10083.1|2120287_2120623_-	sulfurtransferase TusE	NA	A0A2H4J8B6	uncultured_Caudovirales_phage	75.7	7.5e-43
AYN10084.1|2120619_2120916_-	sulfurtransferase complex subunit TusB	NA	A0A2H4JG28	uncultured_Caudovirales_phage	59.6	4.0e-24
AYN10085.1|2120915_2121275_-	sulfurtransferase complex subunit TusC	NA	A0A2H4J8C0	uncultured_Caudovirales_phage	65.8	7.3e-36
AYN10086.1|2121276_2121669_-	sulfurtransferase TusD	NA	A0A2H4JA39	uncultured_Caudovirales_phage	79.8	1.1e-53
AYN10087.1|2121764_2123144_-	xanthine permease XanP	NA	H9YQ34	environmental_Halophage	51.1	1.6e-27
AYN10088.1|2123458_2124130_-	BAX inhibitor (BI)-1/YccA family protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	91.0	2.1e-105
>prophage 4
CP022561	Pseudomonas putida strain B4 chromosome, complete genome	6011680	2193002	2248035	6011680	portal,terminase,capsid,head,tail,transposase,holin,bacteriocin,integrase,protease	Pseudomonas_phage(44.9%)	74	2200137:2200196	2252152:2252243
AYN10148.1|2193002_2193395_-|bacteriocin	bacteriocin	bacteriocin	NA	NA	NA	NA
AYN10149.1|2193468_2193660_-	hypothetical protein	NA	NA	NA	NA	NA
AYN10150.1|2193849_2194140_-	hypothetical protein	NA	NA	NA	NA	NA
AYN10151.1|2194257_2194608_+	hypothetical protein	NA	NA	NA	NA	NA
AYN10152.1|2194777_2195599_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AYN10153.1|2195599_2196367_-	short-chain dehydrogenase	NA	Q06VL0	Trichoplusia_ni_ascovirus	31.3	5.0e-18
AYN10154.1|2196403_2197471_-	phosphotransferase family protein	NA	NA	NA	NA	NA
AYN10155.1|2197654_2197972_-	SCP-2 family sterol carrier protein	NA	NA	NA	NA	NA
AYN10156.1|2198028_2198739_-	histidine phosphatase family protein	NA	NA	NA	NA	NA
AYN10157.1|2198936_2199956_+|protease	protease SohB	protease	A0A2H4UUF9	Bodo_saltans_virus	26.0	5.3e-23
2200137:2200196	attL	CGGATTGCAAATCCGTCTACGCCGGTTCGATTCCGACCTCGGCCTCCACCATTCGAAAGC	NA	NA	NA	NA
AYN10158.1|2200284_2201334_-|integrase	integrase	integrase	A0A2H4JDJ8	uncultured_Caudovirales_phage	56.3	3.2e-100
AYN10159.1|2201335_2201581_-	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
AYN10160.1|2201620_2202118_-	hypothetical protein	NA	A0A1B0VM52	Pseudomonas_phage	60.7	1.7e-35
AYN10161.1|2202169_2202403_-	hypothetical protein	NA	A0A2H4PHJ9	Dickeya_phage	45.5	7.6e-10
AYN10162.1|2202449_2202635_-	hypothetical protein	NA	NA	NA	NA	NA
AYN10163.1|2202631_2203048_-	DUF2591 domain-containing protein	NA	A0A1B0VMD7	Pseudomonas_phage	42.0	6.9e-14
AYN10164.1|2203044_2203317_-	hypothetical protein	NA	A0A2H4J399	uncultured_Caudovirales_phage	70.3	2.2e-24
AYN10165.1|2203313_2204108_-	hypothetical protein	NA	Q5QF32	Pseudomonas_virus	54.5	3.7e-72
AYN10166.1|2205223_2205997_-	hypothetical protein	NA	A0A1J0GVP2	Pseudoalteromonas_phage	50.5	6.6e-50
AYN10167.1|2206048_2206828_+	hypothetical protein	NA	NA	NA	NA	NA
AYN10168.1|2206905_2207331_-	hypothetical protein	NA	NA	NA	NA	NA
AYN10169.1|2207449_2208025_+	hypothetical protein	NA	NA	NA	NA	NA
AYN10170.1|2208014_2208362_-	hypothetical protein	NA	NA	NA	NA	NA
AYN10171.1|2208607_2209108_-	single-stranded DNA-binding protein	NA	I3PGW4	Xanthomonas_phage	72.4	2.8e-46
AYN10172.1|2209104_2209443_-	hypothetical protein	NA	NA	NA	NA	NA
AYN10173.1|2209461_2209845_-	helix-turn-helix transcriptional regulator	NA	A0A1W6JTA9	Pseudomonas_phage	50.9	2.8e-17
AYN10174.1|2210186_2210492_-	hypothetical protein	NA	NA	NA	NA	NA
AYN10175.1|2210835_2211237_-	hypothetical protein	NA	Q5G8W9	Enterobacteria_phage	39.8	5.1e-06
AYN10176.1|2211290_2211992_-	phage repressor protein	NA	A0A2H4J868	uncultured_Caudovirales_phage	60.0	3.0e-49
AYN10177.1|2212075_2212315_+	hypothetical protein	NA	A0A2H4J0V8	uncultured_Caudovirales_phage	77.2	1.4e-27
AYN10178.1|2212447_2213302_+	replication protein	NA	W6MYB0	Pseudomonas_phage	34.1	5.4e-37
AYN10179.1|2213291_2214104_+	ATP-binding protein	NA	A0A2H4J3E5	uncultured_Caudovirales_phage	68.3	1.4e-98
AYN10180.1|2214106_2214403_+	hypothetical protein	NA	A5VW86	Enterobacteria_phage	69.7	3.8e-30
AYN10181.1|2214399_2214828_+	VRR-NUC domain-containing protein	NA	A0A2D1GNH3	Pseudomonas_phage	68.6	1.7e-47
AYN10182.1|2214824_2216114_+|integrase	integrase	integrase	A0A2D1GND4	Pseudomonas_phage	53.4	5.2e-116
AYN10183.1|2216274_2216607_+	hypothetical protein	NA	A0A2D1GNG3	Pseudomonas_phage	43.6	1.7e-15
AYN10184.1|2216619_2217306_+	hypothetical protein	NA	A0A1B0VMF2	Pseudomonas_phage	63.6	1.0e-78
AYN10185.1|2217306_2217729_+	hypothetical protein	NA	NA	NA	NA	NA
AYN10186.1|2217831_2218155_+|holin	phage holin, lambda family	holin	A0A1W6JTC7	Pseudomonas_phage	63.2	7.7e-29
AYN10187.1|2218215_2218395_+	hypothetical protein	NA	NA	NA	NA	NA
AYN10188.1|2218385_2218754_+	HNH endonuclease	NA	H2BDK0	Pseudomonas_virus	59.8	1.8e-18
AYN10189.1|2218889_2219375_+|terminase	terminase	terminase	A0A2D1GNP3	Pseudomonas_phage	86.8	4.4e-76
AYN10190.1|2219375_2221100_+|terminase	terminase	terminase	A0A2D1GNU5	Pseudomonas_phage	91.3	0.0e+00
AYN10191.1|2221099_2222500_+|portal	phage portal protein	portal	A0A0U4IJ43	Pseudomonas_phage	85.4	9.9e-230
AYN10192.1|2222514_2223402_+	peptidase	NA	A0A0U4B0J0	Pseudomonas_phage	75.7	7.6e-119
AYN10193.1|2223398_2224613_+|capsid	phage major capsid protein	capsid	A0A0U4JIW8	Pseudomonas_phage	84.0	3.8e-185
AYN10194.1|2224618_2224900_+	hypothetical protein	NA	K7PHI6	Enterobacteria_phage	53.2	1.4e-05
AYN10195.1|2224902_2225379_+	hypothetical protein	NA	G3ENA1	Psychrobacter_phage	37.0	1.1e-15
AYN10196.1|2225378_2225720_+|head,tail	head-tail adaptor protein	head,tail	A0A1J0GUY4	Halomonas_phage	48.3	1.7e-18
AYN10197.1|2225712_2226198_+	hypothetical protein	NA	A0A0U3TGT7	Pseudomonas_phage	74.8	5.0e-56
AYN10198.1|2226194_2226563_+	hypothetical protein	NA	Q9MCA6	Pseudomonas_phage	59.8	8.0e-38
AYN10199.1|2226628_2227363_+|tail	phage tail protein	tail	H2BDC0	Pseudomonas_virus	51.0	6.7e-52
AYN10200.1|2227371_2227842_+|tail	phage tail protein	tail	K7PJU9	Enterobacteria_phage	66.2	7.8e-38
AYN10201.1|2227865_2228066_+	hypothetical protein	NA	Q9MCA3	Pseudomonas_phage	52.3	1.8e-07
AYN10202.1|2228139_2228490_+	hypothetical protein	NA	A0A0S2SY85	Pseudomonas_phage	57.7	1.5e-09
AYN10203.1|2228545_2230990_+|tail	tail tape measure protein	tail	A0A2H4PI09	Pseudomonas_phage	42.7	9.1e-154
AYN10204.1|2230986_2231469_+	hypothetical protein	NA	A0A2H4J983	uncultured_Caudovirales_phage	54.7	5.7e-44
AYN10205.1|2231473_2231893_+	hypothetical protein	NA	A0A0H5AUG1	Pseudomonas_phage	60.9	3.6e-42
AYN10206.1|2231864_2234963_+	hypothetical protein	NA	A0A2H4J0V9	uncultured_Caudovirales_phage	48.2	2.2e-282
AYN10207.1|2234972_2235455_+	hypothetical protein	NA	B5WZT5	Pseudomonas_phage	51.6	7.0e-26
AYN10208.1|2235498_2237232_+	hypothetical protein	NA	NA	NA	NA	NA
AYN10209.1|2237246_2238005_+	hypothetical protein	NA	NA	NA	NA	NA
AYN10210.1|2238048_2238849_+	hypothetical protein	NA	S5FV10	Shigella_phage	31.9	1.1e-18
AYN10211.1|2238971_2239403_+	muraminidase	NA	A0A0S2SYD0	Pseudomonas_phage	75.0	1.0e-52
AYN10212.1|2239399_2239912_+	hypothetical protein	NA	NA	NA	NA	NA
AYN13503.1|2240101_2240326_+	hypothetical protein	NA	A0A2H4JG60	uncultured_Caudovirales_phage	82.4	5.9e-28
AYN10213.1|2240399_2240693_+	hypothetical protein	NA	A0A2H4JER5	uncultured_Caudovirales_phage	69.1	9.5e-34
AYN10214.1|2240689_2240995_+	hypothetical protein	NA	NA	NA	NA	NA
AYN10215.1|2241145_2241616_-	hypothetical protein	NA	NA	NA	NA	NA
AYN10216.1|2242203_2242632_+	peptidase S24	NA	A0A1L5C2A3	Pseudoalteromonas_phage	42.0	1.8e-12
AYN10217.1|2242621_2243896_+	DNA polymerase V subunit UmuC	NA	I6RSM4	Salmonella_phage	47.9	7.4e-107
AYN10218.1|2243889_2244105_+	hypothetical protein	NA	NA	NA	NA	NA
AYN10219.1|2245992_2246700_+	hypothetical protein	NA	NA	NA	NA	NA
AYN10220.1|2246838_2248035_+|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	45.2	4.8e-92
2252152:2252243	attR	CGGATTGCAAATCCGTCTACGCCGGTTCGATTCCGACCTCGGCCTCCACCATTCGAAAGCCCCGCAGATTAACGTCTGCGGGGTTTTTCTTT	NA	NA	NA	NA
>prophage 5
CP022561	Pseudomonas putida strain B4 chromosome, complete genome	6011680	2558264	2568142	6011680		uncultured_Caudovirales_phage(50.0%)	12	NA	NA
AYN10499.1|2558264_2558927_+	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	36.7	1.2e-28
AYN10500.1|2558923_2560288_+	two-component sensor histidine kinase	NA	NA	NA	NA	NA
AYN10501.1|2560300_2561002_-	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	79.3	1.9e-104
AYN10502.1|2561015_2561486_-	low molecular weight phosphatase family protein	NA	A0A2H4J8A6	uncultured_Caudovirales_phage	68.6	2.2e-56
AYN10503.1|2561514_2562798_-	arsenical efflux pump membrane protein ArsB	NA	A0A2H4J144	uncultured_Caudovirales_phage	75.1	1.9e-174
AYN10504.1|2562819_2563167_-	transcriptional regulator	NA	A0A2H4J145	uncultured_Caudovirales_phage	61.9	1.0e-34
AYN10505.1|2563632_2563860_+	hypothetical protein	NA	NA	NA	NA	NA
AYN10506.1|2564147_2565005_-	3-oxoacyl-ACP reductase	NA	A0A2N9QUX2	Trichoplusia_ni_ascovirus	50.5	1.3e-70
AYN10507.1|2565199_2565724_+	hypothetical protein	NA	NA	NA	NA	NA
AYN10508.1|2566013_2566706_-	DUF421 domain-containing protein	NA	NA	NA	NA	NA
AYN10509.1|2566801_2567572_-	C-factor	NA	Q56AQ6	Bacillus_thuringiensis_phage	41.5	1.1e-41
AYN10510.1|2567650_2568142_-	DUF1543 domain-containing protein	NA	A0A2I2L4Z6	Orpheovirus	36.7	1.0e-24
>prophage 6
CP022561	Pseudomonas putida strain B4 chromosome, complete genome	6011680	4687956	4762204	6011680	portal,terminase,capsid,tail,transposase,holin,head,tRNA,integrase	Pseudomonas_phage(42.62%)	97	4687182:4687210	4767037:4767065
4687182:4687210	attL	TTCGCGGGCACGCCCGCTCCCACAGGTAC	NA	NA	NA	NA
AYN12290.1|4687956_4688781_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	72.0	4.0e-106
AYN12291.1|4689044_4689644_+	YIP1 family protein	NA	NA	NA	NA	NA
AYN12292.1|4689775_4690270_+	SprT family protein	NA	NA	NA	NA	NA
AYN12293.1|4690456_4691236_-	ferredoxin--NADP reductase	NA	NA	NA	NA	NA
AYN12294.1|4691353_4692280_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AYN12295.1|4692276_4692642_-	diacylglycerol kinase	NA	NA	NA	NA	NA
AYN12296.1|4692715_4693366_-	DNA-binding response regulator	NA	NA	NA	NA	NA
AYN12297.1|4693545_4694256_-	DTW domain-containing protein	NA	NA	NA	NA	NA
AYN12298.1|4694252_4694474_-	hypothetical protein	NA	NA	NA	NA	NA
AYN12299.1|4694472_4694892_+	hypothetical protein	NA	NA	NA	NA	NA
AYN12300.1|4694906_4695116_-	hypothetical protein	NA	NA	NA	NA	NA
AYN12301.1|4695276_4696395_+	cytochrome D ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
AYN12302.1|4696665_4697136_-	recombination regulator RecX	NA	NA	NA	NA	NA
AYN12303.1|4697157_4698225_-	DNA recombination/repair protein RecA	NA	A0A0S2MVG1	Bacillus_phage	62.0	1.4e-111
AYN12304.1|4698328_4698811_-	CinA family protein	NA	B5TK85	Pseudomonas_phage	78.6	9.7e-60
AYN12305.1|4698867_4699935_-	hypothetical protein	NA	NA	NA	NA	NA
AYN12306.1|4700290_4700596_-	hypothetical protein	NA	NA	NA	NA	NA
AYN12307.1|4700585_4700894_-	hypothetical protein	NA	A0A2H4JER5	uncultured_Caudovirales_phage	70.5	7.6e-34
AYN12308.1|4701012_4701222_-	hypothetical protein	NA	A0A2H4JG60	uncultured_Caudovirales_phage	56.7	5.2e-10
AYN13581.1|4701246_4701459_-	hypothetical protein	NA	A0A2H4JG60	uncultured_Caudovirales_phage	66.2	4.9e-16
AYN12309.1|4701649_4702162_-	hypothetical protein	NA	NA	NA	NA	NA
AYN12310.1|4702158_4702605_-	structural protein P5	NA	A0A2H4J6R1	uncultured_Caudovirales_phage	52.0	4.6e-32
AYN12311.1|4702976_4704176_-	hypothetical protein	NA	NA	NA	NA	NA
AYN12312.1|4704275_4705082_-	hypothetical protein	NA	NA	NA	NA	NA
AYN12313.1|4705106_4707044_-	hypothetical protein	NA	A0A2H5BHG7	Acinetobacter_phage	27.5	4.4e-18
AYN12314.1|4707100_4707319_-	hypothetical protein	NA	NA	NA	NA	NA
AYN12315.1|4707356_4707839_-	hypothetical protein	NA	B5WZT5	Pseudomonas_phage	50.8	9.2e-26
AYN12316.1|4707848_4710947_-	hypothetical protein	NA	A0A2H4J0V9	uncultured_Caudovirales_phage	48.3	3.8e-282
AYN12317.1|4710918_4711338_-	hypothetical protein	NA	A0A0H5AUG1	Pseudomonas_phage	60.9	3.6e-42
AYN12318.1|4711342_4711825_-	hypothetical protein	NA	A0A2H4J983	uncultured_Caudovirales_phage	54.7	7.5e-44
AYN12319.1|4711821_4714230_-|tail	tail tape measure protein	tail	D4FUM0	Pseudomonas_phage	41.3	1.9e-132
AYN12320.1|4714260_4714461_-	hypothetical protein	NA	Q9MCA3	Pseudomonas_phage	48.4	2.3e-07
AYN12321.1|4714478_4714955_-|tail	phage tail protein	tail	K7PJU9	Enterobacteria_phage	59.6	4.1e-34
AYN12322.1|4714963_4715479_-|tail	phage tail protein	tail	Q9MCA5	Pseudomonas_phage	60.5	2.6e-50
AYN12323.1|4715531_4715900_-	hypothetical protein	NA	Q9MCA6	Pseudomonas_phage	62.3	2.7e-38
AYN12324.1|4715896_4716382_-	hypothetical protein	NA	Q9MCA7	Pseudomonas_phage	74.0	1.6e-54
AYN12325.1|4716374_4716716_-|head,tail	head-tail adaptor protein	head,tail	B5WZS5	Pseudomonas_phage	50.4	5.1e-23
AYN12326.1|4716715_4717192_-	hypothetical protein	NA	G3ENA1	Psychrobacter_phage	40.3	1.8e-18
AYN12327.1|4717195_4717420_-	hypothetical protein	NA	NA	NA	NA	NA
AYN12328.1|4717461_4718718_-|capsid	phage major capsid protein	capsid	Q6JIM7	Burkholderia_virus	49.0	9.6e-91
AYN12329.1|4718727_4719429_-	peptidase U35	NA	Q6JIM8	Burkholderia_virus	63.3	9.1e-75
AYN12330.1|4719425_4720760_-|portal	phage portal protein	portal	Q6JIM9	Burkholderia_virus	55.6	2.2e-130
AYN12331.1|4720752_4720917_-	hypothetical protein	NA	NA	NA	NA	NA
AYN12332.1|4720928_4722656_-|terminase	terminase	terminase	A0A2D1GNU5	Pseudomonas_phage	84.1	6.2e-290
AYN12333.1|4722655_4723135_-|terminase	terminase	terminase	A0A2D1GNP3	Pseudomonas_phage	75.3	1.0e-61
AYN12334.1|4723271_4723640_-	HNH endonuclease	NA	H2BDK0	Pseudomonas_virus	60.9	1.7e-19
AYN12335.1|4723630_4723810_-	hypothetical protein	NA	NA	NA	NA	NA
AYN12336.1|4723870_4724194_-|holin	phage holin, lambda family	holin	A0A1W6JTC7	Pseudomonas_phage	63.2	7.7e-29
AYN12337.1|4724523_4724913_-	antitermination protein Q	NA	A0A1W6JTD2	Pseudomonas_phage	64.1	1.8e-43
AYN12338.1|4724924_4725242_-	hypothetical protein	NA	A0A2D1GNG3	Pseudomonas_phage	61.9	2.0e-29
AYN13582.1|4725238_4725490_-	hypothetical protein	NA	A0A2H4J105	uncultured_Caudovirales_phage	65.8	1.6e-26
AYN12339.1|4725513_4726812_-|integrase	integrase	integrase	A0A2D1GND4	Pseudomonas_phage	52.5	3.7e-122
AYN12340.1|4726808_4727201_-	nuclease	NA	A0A2D1GNH3	Pseudomonas_phage	72.1	2.9e-46
AYN12341.1|4727197_4727494_-	hypothetical protein	NA	Q8HAF2	Salmonella_phage	67.0	3.4e-31
AYN12342.1|4727493_4728288_-	ATP-binding protein	NA	A0A2H4J3E5	uncultured_Caudovirales_phage	54.1	8.8e-74
AYN12343.1|4728277_4729132_-	replication protein	NA	W6MYB0	Pseudomonas_phage	34.3	3.5e-36
AYN12344.1|4729273_4729450_-	Cro/Cl family transcriptional regulator	NA	A0A0S2SYB8	Pseudomonas_phage	62.7	3.2e-13
AYN12345.1|4729538_4730390_+	Cro/Cl family transcriptional regulator	NA	A0A0S2SYF7	Pseudomonas_phage	52.1	1.0e-75
AYN12346.1|4730454_4730748_-	hypothetical protein	NA	A0A0S2SYC9	Pseudomonas_phage	61.8	1.8e-16
AYN12347.1|4731101_4731323_+	hypothetical protein	NA	NA	NA	NA	NA
AYN12348.1|4731385_4731823_+	tellurite resistance protein	NA	A0A2H4P7E3	Pseudomonas_phage	56.2	3.7e-34
AYN12349.1|4731819_4732014_+	hypothetical protein	NA	NA	NA	NA	NA
AYN12350.1|4732203_4732587_+	helix-turn-helix transcriptional regulator	NA	A0A1W6JTA9	Pseudomonas_phage	50.9	2.8e-17
AYN12351.1|4732606_4732945_+	hypothetical protein	NA	NA	NA	NA	NA
AYN12352.1|4732941_4733439_+	single-stranded DNA-binding protein	NA	I3PGW4	Xanthomonas_phage	71.7	2.8e-46
AYN12353.1|4733684_4734032_+	hypothetical protein	NA	NA	NA	NA	NA
AYN12354.1|4734190_4734790_-	hypothetical protein	NA	NA	NA	NA	NA
AYN12355.1|4734880_4735891_+	nucleoid-associated protein YejK	NA	L7TI92	Pseudomonas_virus	62.7	4.6e-120
AYN12356.1|4735945_4736569_+	hypothetical protein	NA	A0A2H4JC30	uncultured_Caudovirales_phage	53.5	3.4e-57
AYN12357.1|4736652_4737033_+	hypothetical protein	NA	A0A2H4J2C6	uncultured_Caudovirales_phage	55.1	5.0e-35
AYN12358.1|4737046_4737862_+	hypothetical protein	NA	NA	NA	NA	NA
AYN12359.1|4738053_4738347_+	hypothetical protein	NA	A0A0S2SY28	Pseudomonas_phage	60.9	4.3e-26
AYN12360.1|4738343_4738595_+	hypothetical protein	NA	A0A2H4J399	uncultured_Caudovirales_phage	97.6	6.8e-41
AYN12361.1|4738591_4739107_+	hypothetical protein	NA	K7PHA5	Enterobacterial_phage	36.5	2.9e-17
AYN12362.1|4739103_4739502_+	DUF2591 domain-containing protein	NA	A0A125RNP6	Pseudomonas_phage	37.7	6.6e-14
AYN13583.1|4739744_4740647_+	phosphohydrolase	NA	A0A1V0E8C5	Vibrio_phage	47.1	1.3e-68
AYN12363.1|4740700_4741015_+	hypothetical protein	NA	NA	NA	NA	NA
AYN12364.1|4741053_4741245_+	DUF4224 domain-containing protein	NA	A0A1B0VMB6	Pseudomonas_phage	62.9	1.4e-17
AYN12365.1|4741260_4742238_+|integrase	integrase	integrase	A0A1B0VP19	Pseudomonas_phage	69.6	1.1e-129
AYN12366.1|4742288_4744862_+	DNA mismatch repair protein MutS	NA	A0A1V0SJ67	Klosneuvirus	23.2	5.2e-27
AYN12367.1|4745002_4745326_+	Ferredoxin 1	NA	NA	NA	NA	NA
AYN12368.1|4745483_4746689_+|transposase	ISL3 family transposase	transposase	A4PE56	Ralstonia_virus	54.0	1.4e-110
AYN12369.1|4747177_4748185_-	RNA polymerase sigma factor RpoS	NA	G8CLC7	Synechococcus_phage	35.8	5.0e-34
AYN12370.1|4748293_4749151_-	peptigoglycan-binding protein LysM	NA	I3PV79	Clostridium_phage	36.2	1.9e-13
AYN13584.1|4749388_4750066_-	protein-L-isoaspartate O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	52.0	6.8e-43
AYN12371.1|4750062_4750812_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	52.6	5.7e-67
AYN12372.1|4750799_4751858_-|tRNA	tRNA pseudouridine(13) synthase TruD	tRNA	NA	NA	NA	NA
AYN12373.1|4751854_4752328_-	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA	NA
AYN12374.1|4752440_4753295_-	S-formylglutathione hydrolase	NA	NA	NA	NA	NA
AYN12375.1|4753303_4754416_-	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	NA	E3SJ82	Synechococcus_phage	28.8	6.2e-33
AYN12376.1|4754523_4755420_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AYN12377.1|4755580_4756288_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
AYN12378.1|4756284_4756566_-	cell division protein FtsB	NA	NA	NA	NA	NA
AYN12379.1|4756731_4758021_-	enolase	NA	A0A1X9I5Z8	Streptococcus_phage	59.6	1.9e-139
AYN12380.1|4758175_4759021_-	2-dehydro-3-deoxyphosphooctonate aldolase 1	NA	E3T537	Cafeteria_roenbergensis_virus	42.0	1.1e-50
AYN12381.1|4759024_4760653_-	CTP synthetase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	53.3	4.0e-158
AYN12382.1|4760920_4762204_-|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	NA	NA	NA	NA
4767037:4767065	attR	TTCGCGGGCACGCCCGCTCCCACAGGTAC	NA	NA	NA	NA
