The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP033055	Serratia sp. 3ACOL1 chromosome, complete genome	5876609	148618	158397	5876609	integrase	Morganella_phage(25.0%)	12	144371:144385	155219:155233
144371:144385	attL	GCCAGATCGGCGGGC	NA	NA	NA	NA
AYM89213.1|148618_149485_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	35.0	8.2e-33
AYM89214.1|149713_149926_+	hypothetical protein	NA	NA	NA	NA	NA
AYM89215.1|150064_150886_-	hypothetical protein	NA	NA	NA	NA	NA
AYM93848.1|151432_151822_-|integrase	site-specific integrase	integrase	Q5G8V5	Enterobacteria_phage	70.3	1.0e-51
AYM89216.1|151706_152903_+	DUF3383 family protein	NA	I7B2P4	Escherichia_phage	45.3	6.2e-55
AYM89217.1|153423_153783_+	hypothetical protein	NA	NA	NA	NA	NA
AYM89218.1|153796_154255_+	hypothetical protein	NA	NA	NA	NA	NA
AYM89219.1|154476_154674_+	AlpA family transcriptional regulator	NA	A0A1V0E8E5	Vibrio_phage	47.2	8.6e-07
AYM89220.1|154673_155096_+	hypothetical protein	NA	A0A1W6JPH9	Morganella_phage	56.9	9.5e-27
AYM89221.1|155109_155943_+	antA/AntB antirepressor family protein	NA	A0A0P0ZCA2	Stx2-converting_phage	46.8	3.4e-20
155219:155233	attR	GCCAGATCGGCGGGC	NA	NA	NA	NA
AYM89222.1|156846_157026_+	hypothetical protein	NA	A0A2H4JB52	uncultured_Caudovirales_phage	53.4	1.6e-07
AYM89223.1|157047_158397_+	hypothetical protein	NA	A0A1W6JNS5	Morganella_phage	71.2	1.3e-191
>prophage 2
CP033055	Serratia sp. 3ACOL1 chromosome, complete genome	5876609	797784	806599	5876609	tRNA	Escherichia_phage(83.33%)	6	NA	NA
AYM89765.1|797784_799077_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	52.4	1.0e-92
AYM89766.1|799340_801791_+	dimethyl sulfoxide reductase subunit A	NA	A0A077SK27	Escherichia_phage	49.7	9.5e-220
AYM89767.1|802001_804452_+	twin-arginine translocation signal domain-containing protein	NA	A0A077SK27	Escherichia_phage	50.6	3.7e-224
AYM89768.1|804462_805080_+	dimethylsulfoxide reductase subunit B	NA	A0A077SL61	Escherichia_phage	59.1	1.9e-76
AYM89769.1|805081_805942_+	dimethylsulfoxide reductase	NA	A0A077SK59	Escherichia_phage	33.5	5.3e-24
AYM89770.1|805990_806599_+	Tat proofreading chaperone DmsD	NA	A0A077SLS7	Escherichia_phage	33.8	7.5e-25
>prophage 3
CP033055	Serratia sp. 3ACOL1 chromosome, complete genome	5876609	877670	931875	5876609	plate,protease	uncultured_Caudovirales_phage(40.0%)	48	NA	NA
AYM89823.1|877670_879440_-|protease	Lon protease family protein	protease	NA	NA	NA	NA
AYM89824.1|879627_880086_+	macrodomain Ter protein MatP	NA	NA	NA	NA	NA
AYM89825.1|880152_881211_-	porin OmpA	NA	NA	NA	NA	NA
AYM89826.1|881570_882077_-	cell division inhibitor SulA	NA	NA	NA	NA	NA
AYM89827.1|882969_885105_-	TIGR01666 family membrane protein	NA	NA	NA	NA	NA
AYM89828.1|885139_885583_-	YccF domain-containing protein	NA	NA	NA	NA	NA
AYM89829.1|885784_887839_+	DNA helicase IV	NA	A7KV33	Bacillus_phage	25.4	2.5e-16
AYM89830.1|888017_888476_-	methylglyoxal synthase	NA	NA	NA	NA	NA
AYM89831.1|888603_889263_-	DUF2057 family protein	NA	NA	NA	NA	NA
AYM89832.1|889502_889916_+	CoA-binding protein	NA	NA	NA	NA	NA
AYM89833.1|890014_890332_-	heat shock protein HspQ	NA	NA	NA	NA	NA
AYM89834.1|890393_891584_-	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA	NA	NA	NA	NA
AYM89835.1|891677_891956_+	acylphosphatase	NA	NA	NA	NA	NA
AYM89836.1|891963_892293_-	sulfurtransferase TusE	NA	A0A2H4J8B6	uncultured_Caudovirales_phage	51.9	1.4e-22
AYM89837.1|892402_893062_-|protease	FtsH protease modulator YccA	protease	A0A2H4JFM9	uncultured_Caudovirales_phage	53.5	2.4e-48
AYM93882.1|893753_894629_+	polyphosphate kinase 2	NA	NA	NA	NA	NA
AYM89838.1|895179_896424_+	amino acid permease	NA	NA	NA	NA	NA
AYM89839.1|896997_897960_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AYM89840.1|898040_898943_+	ABC transporter permease	NA	NA	NA	NA	NA
AYM89841.1|898939_899734_+	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	24.1	3.2e-07
AYM89842.1|899898_901497_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AYM89843.1|901559_902774_-	O-antigen ligase family protein	NA	NA	NA	NA	NA
AYM89844.1|902793_903963_-	putative lipopolysaccharide heptosyltransferase III	NA	NA	NA	NA	NA
AYM89845.1|904243_906388_-	formate dehydrogenase subunit alpha	NA	A0A077SK27	Escherichia_phage	23.2	2.6e-27
AYM89846.1|906723_907176_-	hydrogenase maturation peptidase HycI	NA	NA	NA	NA	NA
AYM89847.1|907172_907589_-	formate hydrogenlyase maturation protein HycH	NA	NA	NA	NA	NA
AYM89848.1|907578_908364_-	NADH-quinone oxidoreductase subunit NuoB	NA	NA	NA	NA	NA
AYM89849.1|908365_908911_-	hydrogenase 4 subunit H	NA	NA	NA	NA	NA
AYM89850.1|908921_910658_-	hydrogenase large subunit	NA	NA	NA	NA	NA
AYM93883.1|910654_912238_-	hydrogenase 4 subunit F	NA	NA	NA	NA	NA
AYM89851.1|912242_912893_-	hydrogenase 4 membrane subunit	NA	NA	NA	NA	NA
AYM89852.1|912904_914362_-	hydrogenase 4 subunit D	NA	NA	NA	NA	NA
AYM89853.1|914379_915330_-	hydrogenase 3 membrane subunit	NA	NA	NA	NA	NA
AYM89854.1|915342_917358_-	hydrogenase 4 subunit B	NA	NA	NA	NA	NA
AYM89855.1|917360_917981_-	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA	NA
AYM89856.1|918012_918555_-	electron transport protein HydN	NA	NA	NA	NA	NA
AYM89857.1|918928_919273_+	hydrogenase maturation nickel metallochaperone HypA	NA	NA	NA	NA	NA
AYM89858.1|919288_919582_+	hydrogenase maturation factor HybG	NA	NA	NA	NA	NA
AYM89859.1|919721_921788_+	formate hydrogenlyase transcriptional activator FlhA	NA	NA	NA	NA	NA
AYM89860.1|922129_922648_-	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
AYM89861.1|923409_923907_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
AYM89862.1|923934_925416_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
AYM89863.1|925422_925863_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
AYM89864.1|925862_927677_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
AYM89865.1|927640_928693_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
AYM89866.1|928718_930023_+	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA	NA
AYM89867.1|930019_930526_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
AYM89868.1|930528_931875_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
>prophage 4
CP033055	Serratia sp. 3ACOL1 chromosome, complete genome	5876609	1142412	1222237	5876609	integrase,portal,protease,tail,head,coat,lysis,terminase,capsid,tRNA	Morganella_phage(16.22%)	89	1127090:1127114	1189878:1189902
1127090:1127114	attL	GTAGGGGCGCTGCATGCTGCGCCCG	NA	NA	NA	NA
AYM90031.1|1142412_1143516_-|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
AYM90032.1|1143611_1144058_-	NUDIX hydrolase	NA	NA	NA	NA	NA
AYM93890.1|1144067_1144694_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA	NA
AYM90033.1|1144834_1146088_+	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	88.9	8.8e-20
AYM90034.1|1146392_1147187_+	DUF2971 domain-containing protein	NA	NA	NA	NA	NA
AYM93891.1|1147455_1148409_-	HNH endonuclease	NA	A0A1S6KZY3	Salmonella_phage	72.1	1.4e-131
AYM90035.1|1148693_1149821_-|integrase	integrase	integrase	O21925	Phage_21	63.0	1.3e-126
AYM90036.1|1149801_1150047_-	excisionase	NA	NA	NA	NA	NA
AYM90037.1|1150090_1150426_-	hypothetical protein	NA	H9C172	Pectobacterium_phage	43.0	1.9e-22
AYM90038.1|1150425_1150884_-	hypothetical protein	NA	NA	NA	NA	NA
AYM90039.1|1150880_1151501_-	3'-5' exoribonuclease	NA	A0A2D1GMH0	Marinobacter_phage	30.9	1.1e-12
AYM90040.1|1151767_1151998_-	hypothetical protein	NA	NA	NA	NA	NA
AYM90041.1|1152325_1152970_-	helix-turn-helix domain-containing protein	NA	A0A1I9KG86	Aeromonas_phage	40.5	2.2e-38
AYM90042.1|1153072_1153282_+	cell division protein	NA	NA	NA	NA	NA
AYM90043.1|1153309_1153843_+	DNA-binding protein	NA	Q8SBF4	Shigella_phage	32.1	4.7e-15
AYM90044.1|1153850_1154036_+	hypothetical protein	NA	NA	NA	NA	NA
AYM93892.1|1154248_1154431_+	DUF4222 domain-containing protein	NA	NA	NA	NA	NA
AYM90045.1|1155482_1155827_+	hypothetical protein	NA	NA	NA	NA	NA
AYM90046.1|1155823_1156036_+	hypothetical protein	NA	NA	NA	NA	NA
AYM90047.1|1156032_1156923_+	DNA cytosine methyltransferase	NA	A0A120HUM8	Bacillus_phage	26.5	4.6e-23
AYM90048.1|1156919_1157489_+	S-adenosylmethionine-binding protein	NA	Q858E6	Salmonella_phage	77.3	6.5e-87
AYM90049.1|1157485_1158472_+	DUF968 domain-containing protein	NA	A0A0P0ZD76	Stx2-converting_phage	48.8	2.2e-90
AYM90050.1|1158502_1159321_+	hypothetical protein	NA	NA	NA	NA	NA
AYM90051.1|1159396_1159759_+	antitermination protein	NA	A5LH77	Enterobacteria_phage	55.8	1.1e-31
AYM90052.1|1159836_1160412_-	hypothetical protein	NA	S5FXQ0	Shigella_phage	60.2	2.0e-59
AYM90053.1|1160419_1161448_-	hypothetical protein	NA	S5FNT5	Shigella_phage	57.6	1.5e-113
AYM90054.1|1161740_1162769_+	site-specific DNA-methyltransferase	NA	A0A1W6JP25	Morganella_phage	67.3	3.3e-121
AYM93893.1|1162846_1163089_+|lysis	lysis protein	lysis	NA	NA	NA	NA
AYM93894.1|1163096_1163576_+	lysozyme	NA	A0A1V0E5Q7	Salmonella_phage	60.0	3.7e-51
AYM90055.1|1163572_1163911_+	DUF2570 domain-containing protein	NA	NA	NA	NA	NA
AYM90056.1|1163879_1164110_+	hypothetical protein	NA	Q776X1	Haemophilus_phage	41.2	1.4e-08
AYM90057.1|1164195_1164507_+	hypothetical protein	NA	NA	NA	NA	NA
AYM90058.1|1164611_1164962_+	HNH endonuclease	NA	A0A1W6JP27	Morganella_phage	75.0	1.2e-46
AYM90059.1|1164958_1165159_+	hypothetical protein	NA	NA	NA	NA	NA
AYM90060.1|1165351_1165849_+|terminase	phage terminase small subunit P27 family	terminase	K7PHI2	Enterobacteria_phage	72.0	5.7e-63
AYM90061.1|1165852_1167604_+|terminase	terminase large subunit	terminase	A0A1P8DTK0	Proteus_phage	74.1	2.0e-256
AYM90062.1|1167751_1168972_+|portal	phage portal protein	portal	Q8SBI0	Shigella_phage	80.1	6.5e-193
AYM90063.1|1168964_1169564_+|head,protease	HK97 family phage prohead protease	head,protease	Q8SBH9	Shigella_phage	83.5	3.5e-91
AYM93895.1|1169582_1170797_+|capsid	phage major capsid protein	capsid	A0A1W6JP20	Morganella_phage	79.5	1.1e-179
AYM90064.1|1170881_1171199_+|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A1W6JNZ5	Morganella_phage	52.4	9.6e-24
AYM90065.1|1171208_1171547_+|head,tail	head-tail adaptor protein	head,tail	A0A2H4JHK5	uncultured_Caudovirales_phage	63.1	7.8e-32
AYM90066.1|1171543_1171990_+	HK97 gp10 family phage protein	NA	A0A0N7KZI9	Stx2-converting_phage	64.9	3.3e-46
AYM90067.1|1171986_1172334_+	DUF3168 domain-containing protein	NA	K7P7Q9	Enterobacteria_phage	47.8	7.3e-25
AYM90068.1|1172391_1173093_+	Ig domain-containing protein	NA	K7PJR9	Enterobacterial_phage	60.8	2.9e-44
AYM90069.1|1173108_1173528_+|tail	phage tail protein	tail	A0A1W6JP08	Morganella_phage	58.0	1.3e-31
AYM90070.1|1173527_1173809_+	DUF4035 domain-containing protein	NA	S4TND7	Salmonella_phage	57.3	1.6e-17
AYM90071.1|1173843_1177254_+|tail	phage tail tape measure protein	tail	A0A0P0ZCJ4	Stx2-converting_phage	44.8	1.2e-135
AYM90072.1|1177253_1177607_+|tail	phage tail protein	tail	K7P7R1	Enterobacteria_phage	48.7	7.4e-25
AYM90073.1|1177616_1178369_+|tail	phage minor tail protein L	tail	A0A1W6JNX9	Morganella_phage	57.4	1.4e-84
AYM90074.1|1179129_1179846_+	peptidase P60	NA	K7P7M8	Enterobacteria_phage	51.9	6.9e-70
AYM90075.1|1179887_1180568_+	PDZ domain-containing protein	NA	NA	NA	NA	NA
AYM90076.1|1181354_1184729_+	DUF1983 domain-containing protein	NA	F1C571	Cronobacter_phage	54.4	0.0e+00
AYM90077.1|1184791_1186477_+	hypothetical protein	NA	A0A2P1CKQ2	Pantoea_phage	62.6	1.2e-48
AYM93896.1|1186617_1186875_+	hypothetical protein	NA	A0A1V0E5L9	Salmonella_phage	51.8	8.3e-18
AYM90078.1|1187068_1187272_-	hypothetical protein	NA	NA	NA	NA	NA
AYM90079.1|1187451_1187604_+	hypothetical protein	NA	Q77Z09	Phage_21	88.0	3.8e-18
AYM90080.1|1187943_1188462_+	hypothetical protein	NA	NA	NA	NA	NA
AYM90081.1|1188468_1188840_+	hypothetical protein	NA	NA	NA	NA	NA
AYM90082.1|1189180_1189711_+	type 1 fimbrial protein	NA	NA	NA	NA	NA
AYM90083.1|1190499_1191045_+	type 1 fimbrial protein	NA	NA	NA	NA	NA
1189878:1189902	attR	GTAGGGGCGCTGCATGCTGCGCCCG	NA	NA	NA	NA
AYM90084.1|1191342_1192512_+	type 1 fimbrial protein	NA	NA	NA	NA	NA
AYM90085.1|1193054_1193600_+	type 1 fimbrial protein	NA	NA	NA	NA	NA
AYM90086.1|1193661_1194366_+	molecular chaperone	NA	NA	NA	NA	NA
AYM90087.1|1194426_1197006_+	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA	NA
AYM90088.1|1197556_1197967_+	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
AYM90089.1|1198921_1199551_+	LysE family translocator	NA	NA	NA	NA	NA
AYM90090.1|1199608_1200256_-	hypothetical protein	NA	NA	NA	NA	NA
AYM90091.1|1200595_1201876_-	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
AYM90092.1|1201886_1203383_-	aldehyde dehydrogenase PuuC	NA	NA	NA	NA	NA
AYM90093.1|1203398_1203956_-	HTH-type transcriptional regulator PuuR	NA	NA	NA	NA	NA
AYM90094.1|1203952_1204714_-	gamma-glutamyl-gamma-aminobutyrate hydrolase	NA	NA	NA	NA	NA
AYM90095.1|1204950_1206369_+	glutamine synthetase	NA	NA	NA	NA	NA
AYM90096.1|1206496_1207867_+	APC family permease	NA	NA	NA	NA	NA
AYM90097.1|1207960_1208854_+	drug/metabolite DMT transporter permease	NA	NA	NA	NA	NA
AYM90098.1|1208938_1209211_+	hypothetical protein	NA	NA	NA	NA	NA
AYM90099.1|1209602_1210481_+	nucleoside-specific channel-forming protein Tsx	NA	NA	NA	NA	NA
AYM90100.1|1210534_1210717_-	hypothetical protein	NA	NA	NA	NA	NA
AYM90101.1|1211162_1212698_-	class A beta-lactamase-related serine hydrolase	NA	NA	NA	NA	NA
AYM90102.1|1213842_1215063_-	imidazolonepropionase	NA	NA	NA	NA	NA
AYM90103.1|1215257_1216013_-	histidine utilization repressor	NA	NA	NA	NA	NA
AYM90104.1|1216196_1217567_+	formimidoylglutamate deiminase	NA	NA	NA	NA	NA
AYM90105.1|1217566_1218139_+	HutD family protein	NA	NA	NA	NA	NA
AYM90106.1|1218291_1218501_-	DUF2767 family protein	NA	NA	NA	NA	NA
AYM90107.1|1218673_1218862_+	hypothetical protein	NA	NA	NA	NA	NA
AYM90108.1|1219304_1219691_+	ASCH domain-containing protein	NA	NA	NA	NA	NA
AYM90109.1|1219694_1220300_+	hypothetical protein	NA	NA	NA	NA	NA
AYM90110.1|1220353_1220602_-	DUF1480 family protein	NA	NA	NA	NA	NA
AYM90111.1|1221109_1221655_+	SCPU domain-containing protein	NA	NA	NA	NA	NA
AYM90112.1|1221718_1222237_+|coat	spore coat U domain-containing protein	coat	NA	NA	NA	NA
>prophage 5
CP033055	Serratia sp. 3ACOL1 chromosome, complete genome	5876609	3106509	3121909	5876609	tail	Enterobacteria_phage(36.36%)	12	NA	NA
AYM91603.1|3106509_3107247_+	class I SAM-dependent methyltransferase	NA	A0A1X9I6N4	Streptococcus_phage	43.2	6.1e-53
AYM91604.1|3109342_3115084_-	DUF1983 domain-containing protein	NA	E4WL39	Enterobacteria_phage	55.8	7.3e-287
AYM91605.1|3115141_3115795_-|tail	tail assembly protein	tail	F1C572	Cronobacter_phage	47.4	3.5e-44
AYM91606.1|3115791_3116502_-	peptidase P60	NA	M9NZD8	Enterobacteria_phage	56.2	3.0e-81
AYM91607.1|3116504_3117257_-|tail	phage minor tail protein L	tail	K7PGX3	Enterobacteria_phage	56.6	6.5e-87
AYM91608.1|3117265_3117607_-|tail	phage tail protein	tail	A0A0S2SYI2	Pseudomonas_phage	40.2	1.5e-14
AYM93997.1|3117890_3118802_-|tail	phage tail tape measure protein	tail	E4WL33	Enterobacteria_phage	50.7	5.4e-51
AYM91609.1|3119354_3119660_-	hypothetical protein	NA	I6PD79	Cronobacter_phage	64.1	1.2e-18
AYM91610.1|3119656_3120010_-	hypothetical protein	NA	G8C7Q5	Escherichia_phage	51.7	6.1e-27
AYM91611.1|3120083_3120746_-|tail	phage tail protein	tail	I6PBN6	Cronobacter_phage	63.1	1.2e-71
AYM91612.1|3120851_3121256_-	hypothetical protein	NA	NA	NA	NA	NA
AYM91613.1|3121543_3121909_-	antitermination protein Q	NA	B6SCY2	Bacteriophage	55.0	4.6e-30
