assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003665435.1_ASM366543v1	CP023407	Streptomyces fungicidicus strain TXX3120 chromosome, complete genome	2	1733262-1733380	1	CRISPRCasFinder	no	DEDDh	csa3,WYL,casR,DEDDh,cas4,Cas9_archaeal,cas3,RT,DinG	Unclear	CTGAACACCACGCAGGAGGCCGGTCGATGAGCG	33	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,casR,DEDDh,cas4,Cas9_archaeal,cas3,RT,DinG,c2c9_V-U4	NA|69aa|up_7|CP023407.1_1726136_1726343_-,NA|39aa|up_6|CP023407.1_1726531_1726648_-,NA|75aa|down_3|CP023407.1_1737324_1737549_+	NA|403aa|up_9|CP023407.1_1724249_1725458_+	cd07500, HAD_PSP, phosphoserine phosphatase (PSP), similar to Methanococcus Jannaschii PSP and Saccharomyces cerevisiae SER2p	NA|173aa|up_8|CP023407.1_1725552_1726071_-	COG2062, SixA, Phosphohistidine phosphatase SixA [Signal transduction mechanisms]	NA|69aa|up_7|CP023407.1_1726136_1726343_-	NA	NA|39aa|up_6|CP023407.1_1726531_1726648_-	NA	NA|443aa|up_5|CP023407.1_1727041_1728370_-	TIGR00896, Inner_membrane_transport_protein_YeaN, cyanate transporter	NA|233aa|up_4|CP023407.1_1728440_1729139_+	COG2186, FadR, Transcriptional regulators [Transcription]	NA|256aa|up_3|CP023407.1_1729222_1729990_-	PRK07889, PRK07889, enoyl-[acyl-carrier-protein] reductase FabI	NA|235aa|up_2|CP023407.1_1729996_1730701_-	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs	NA|129aa|up_1|CP023407.1_1730870_1731257_-	cd09874, PIN_MT3492-like, VapC-like PIN domain of the hypothetical protein MT3492 of Mycobacterium tuberculosis CDC1551 and other uncharacterized, annotated PilT protein domain proteins	NA|95aa|up_0|CP023407.1_1731262_1731547_-	COG4118, Phd, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning]	NA|423aa|down_0|CP023407.1_1734833_1736102_+	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated	NA|95aa|down_1|CP023407.1_1736172_1736457_-	PRK10457, PRK10457, hypothetical protein; Provisional	NA|160aa|down_2|CP023407.1_1736620_1737100_+	pfam11298, DUF3099, Protein of unknown function (DUF3099)	NA|75aa|down_3|CP023407.1_1737324_1737549_+	NA	NA|330aa|down_4|CP023407.1_1737561_1738551_-	PRK00164, moaA, GTP 3',8-cyclase MoaA	NA|543aa|down_5|CP023407.1_1738707_1740336_-	cd11480, SLC5sbd_u4, Uncharacterized bacterial solute carrier 5 subfamily; putative solute-binding domain	NA|119aa|down_6|CP023407.1_1740332_1740689_-	pfam04341, DUF485, Protein of unknown function, DUF485	NA|510aa|down_7|CP023407.1_1740960_1742490_+	cd07484, Peptidases_S8_Thermitase_like, Peptidase S8 family domain in Thermitase-like proteins	NA|511aa|down_8|CP023407.1_1742542_1744075_+	cd07473, Peptidases_S8_Subtilisin_like, Peptidase S8 family domain in Subtilisin-like proteins	NA|458aa|down_9|CP023407.1_1744160_1745534_+	pfam02515, CoA_transf_3, CoA-transferase family III
GCA_003665435.1_ASM366543v1	CP023407	Streptomyces fungicidicus strain TXX3120 chromosome, complete genome	4	2730818-2730914	3	CRISPRCasFinder	no		csa3,WYL,casR,DEDDh,cas4,Cas9_archaeal,cas3,RT,DinG	Orphan	TGACATGAGCCTCCGCGCCCCGA	23	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,casR,DEDDh,cas4,Cas9_archaeal,cas3,RT,DinG,c2c9_V-U4	NA|433aa|up_6|CP023407.1_2717650_2718949_+,NA|222aa|down_2|CP023407.1_2734894_2735560_-,NA|403aa|down_6|CP023407.1_2738968_2740177_-,NA|182aa|down_7|CP023407.1_2740378_2740924_+	NA|321aa|up_9|CP023407.1_2713580_2714543_+	COG2971, COG2971, Predicted N-acetylglucosamine kinase [Carbohydrate transport and metabolism]	NA|484aa|up_8|CP023407.1_2715082_2716534_+	COG2948, VirB10, Type IV secretory pathway, VirB10 components [Intracellular trafficking and secretion]	NA|331aa|up_7|CP023407.1_2716614_2717607_+	cd13690, PBP2_GluB, Substrate binding domain of ABC glutamate transporter; the type 2 periplasmic binding protein fold	NA|433aa|up_6|CP023407.1_2717650_2718949_+	NA	NA|861aa|up_5|CP023407.1_2718971_2721554_+	pfam16918, PknG_TPR, Protein kinase G tetratricopeptide repeat	NA|500aa|up_4|CP023407.1_2721557_2723057_+	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms]	NA|450aa|up_3|CP023407.1_2723169_2724519_+	pfam18571, VWA_3_C, von Willebrand factor type A C-terminal domain	NA|452aa|up_2|CP023407.1_2724601_2725957_+	cd00060, FHA, Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins	NA|335aa|up_1|CP023407.1_2725937_2726942_-	TIGR04188, conserved_hypothetical_protein, methyltransferase, ATP-grasp peptide maturase system	NA|138aa|up_0|CP023407.1_2726991_2727405_+	cd14771, TrHb2_Mt-trHbO-like_O, Truncated hemoglobins, group 2 (O); Mycobacterium tuberculosis hemoglobin O like	NA|917aa|down_0|CP023407.1_2731103_2733854_+	COG3127, COG3127, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|321aa|down_1|CP023407.1_2733912_2734875_+	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|222aa|down_2|CP023407.1_2734894_2735560_-	NA	NA|139aa|down_3|CP023407.1_2735556_2735973_-	COG0824, FcbC, Predicted thioesterase [General function prediction only]	NA|555aa|down_4|CP023407.1_2735977_2737642_-	PRK11819, PRK11819, putative ABC transporter ATP-binding protein; Reviewed	NA|178aa|down_5|CP023407.1_2737860_2738394_+	pfam18143, HAD_SAK_2, HAD domain in Swiss Army Knife RNA repair proteins	NA|403aa|down_6|CP023407.1_2738968_2740177_-	NA	NA|182aa|down_7|CP023407.1_2740378_2740924_+	NA	NA|472aa|down_8|CP023407.1_2740963_2742379_-	pfam08341, TED, Thioester domain	NA|157aa|down_9|CP023407.1_2742657_2743128_-	PRK07772, PRK07772, single-stranded DNA-binding protein; Provisional
GCA_003665435.1_ASM366543v1	CP023407	Streptomyces fungicidicus strain TXX3120 chromosome, complete genome	6	4838926-4839023	5	CRISPRCasFinder	no		csa3,WYL,casR,DEDDh,cas4,Cas9_archaeal,cas3,RT,DinG	Orphan	GCCCTGCGGCACGACTGCCCGCGG	24	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,casR,DEDDh,cas4,Cas9_archaeal,cas3,RT,DinG,c2c9_V-U4	NA|113aa|up_9|CP023407.1_4827771_4828110_+,NA|43aa|down_3|CP023407.1_4842576_4842705_-	NA|113aa|up_9|CP023407.1_4827771_4828110_+	NA	NA|290aa|up_8|CP023407.1_4828176_4829046_-	pfam00171, Aldedh, Aldehyde dehydrogenase family	NA|482aa|up_7|CP023407.1_4829056_4830502_-	cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like	NA|318aa|up_6|CP023407.1_4830513_4831467_-	cd00959, DeoC, 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family	NA|247aa|up_5|CP023407.1_4831579_4832320_+	pfam10756, bPH_6, Bacterial PH domain	NA|545aa|up_4|CP023407.1_4832400_4834035_-	cd05799, PGM2, This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1)	NA|275aa|up_3|CP023407.1_4834732_4835557_-	PRK08202, PRK08202, purine nucleoside phosphorylase; Provisional	NA|147aa|up_2|CP023407.1_4835648_4836089_-	pfam13772, AIG2_2, AIG2-like family	NA|483aa|up_1|CP023407.1_4836185_4837634_+	PRK07845, PRK07845, flavoprotein disulfide reductase; Reviewed	NA|322aa|up_0|CP023407.1_4837780_4838746_+	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]	NA|591aa|down_0|CP023407.1_4839256_4841029_-	COG4770, COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism]	NA|176aa|down_1|CP023407.1_4841393_4841921_+	pfam06682, SARAF, SOCE-associated regulatory factor of calcium homoeostasis	NA|206aa|down_2|CP023407.1_4841892_4842510_-	PRK00148, PRK00148, Maf-like protein; Reviewed	NA|43aa|down_3|CP023407.1_4842576_4842705_-	NA	NA|70aa|down_4|CP023407.1_4842812_4843022_-	pfam13822, ACC_epsilon, Acyl-CoA carboxylase epsilon subunit	NA|530aa|down_5|CP023407.1_4843038_4844628_-	COG4799, COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]	NA|290aa|down_6|CP023407.1_4844738_4845608_+	COG0340, BirA, Biotin-(acetyl-CoA carboxylase) ligase [Coenzyme metabolism]	NA|369aa|down_7|CP023407.1_4846376_4847483_+	cd07302, CHD, cyclase homology domain	NA|267aa|down_8|CP023407.1_4848280_4849081_+	PRK07657, PRK07657, enoyl-CoA hydratase; Provisional	NA|373aa|down_9|CP023407.1_4849185_4850304_+	smart00267, GGDEF, diguanylate cyclase
GCA_003665435.1_ASM366543v1	CP023407	Streptomyces fungicidicus strain TXX3120 chromosome, complete genome	8	5220030-5220135	7	CRISPRCasFinder	no		csa3,WYL,casR,DEDDh,cas4,Cas9_archaeal,cas3,RT,DinG	Orphan	GCCCGCGGAGTGCGGCTGCGGCGG	24	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,casR,DEDDh,cas4,Cas9_archaeal,cas3,RT,DinG,c2c9_V-U4	NA,NA|60aa|down_0|CP023407.1_5220223_5220403_-,NA|265aa|down_8|CP023407.1_5231462_5232257_-	NA|257aa|up_9|CP023407.1_5210414_5211185_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|251aa|up_8|CP023407.1_5211264_5212017_-	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|313aa|up_7|CP023407.1_5212037_5212976_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|321aa|up_6|CP023407.1_5213014_5213977_-	cd01004, PBP2_MidA_like, Mimosine binding domain of ABC-type transporter MidA and similar proteins; the type 2 periplasmic binding protein fold	NA|413aa|up_5|CP023407.1_5214561_5215800_+	COG0281, SfcA, Malic enzyme [Energy production and conversion]	NA|322aa|up_4|CP023407.1_5215963_5216929_+	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family	NA|70aa|up_3|CP023407.1_5217032_5217242_+	PRK00118, PRK00118, putative DNA-binding protein; Validated	NA|188aa|up_2|CP023407.1_5217241_5217805_+	CHL00095, clpC, Clp protease ATP binding subunit	NA|348aa|up_1|CP023407.1_5217866_5218910_-	pfam03551, PadR, Transcriptional regulator PadR-like family	NA|291aa|up_0|CP023407.1_5218911_5219784_-	pfam13349, DUF4097, Putative adhesin	NA|60aa|down_0|CP023407.1_5220223_5220403_-	NA	NA|1268aa|down_1|CP023407.1_5220483_5224287_-	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit	NA|371aa|down_2|CP023407.1_5224578_5225691_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|247aa|down_3|CP023407.1_5225687_5226428_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|231aa|down_4|CP023407.1_5226552_5227245_-	COG0421, SpeE, Spermidine synthase [Amino acid transport and metabolism]	NA|808aa|down_5|CP023407.1_5227397_5229821_+	COG0466, Lon, ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones]	NA|275aa|down_6|CP023407.1_5229904_5230729_-	cd06412, GH25_CH-type, CH-type (Chalaropsis-type) lysozymes represent one of four functionally-defined classes of peptidoglycan hydrolases (also referred to as endo-N-acetylmuramidases) that cleave bacterial cell wall peptidoglycans	NA|165aa|down_7|CP023407.1_5230957_5231452_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|265aa|down_8|CP023407.1_5231462_5232257_-	NA	NA|1095aa|down_9|CP023407.1_5232666_5235951_+	pfam08376, NIT, Nitrate and nitrite sensing
GCA_003665435.1_ASM366543v1	CP023407	Streptomyces fungicidicus strain TXX3120 chromosome, complete genome	9	6207220-6207310	8	CRISPRCasFinder	no		csa3,WYL,casR,DEDDh,cas4,Cas9_archaeal,cas3,RT,DinG	Orphan	AGCCACGAACCACCCGCACCCGGCA	25	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,casR,DEDDh,cas4,Cas9_archaeal,cas3,RT,DinG,c2c9_V-U4	NA|44aa|up_9|CP023407.1_6195335_6195467_+,NA|58aa|down_8|CP023407.1_6218595_6218769_+	NA|44aa|up_9|CP023407.1_6195335_6195467_+	NA	NA|348aa|up_8|CP023407.1_6195534_6196578_+	PRK03437, PRK03437, 3-isopropylmalate dehydrogenase; Provisional	NA|363aa|up_7|CP023407.1_6196826_6197915_+	PRK13357, PRK13357, branched-chain amino acid aminotransferase; Provisional	NA|535aa|up_6|CP023407.1_6198264_6199869_+	PRK12344, PRK12344, putative alpha-isopropylmalate/homocitrate synthase family transferase; Provisional	NA|450aa|up_5|CP023407.1_6199964_6201314_+	pfam16208, Keratin_2_head, Keratin type II head	NA|202aa|up_4|CP023407.1_6201434_6202040_-	pfam04264, YceI, YceI-like domain	NA|500aa|up_3|CP023407.1_6202224_6203724_-	TIGR04367, protein_of_the_SAM_superfamily, hopanoid C-3 methylase HpnR	NA|285aa|up_2|CP023407.1_6204020_6204875_+	COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]	NA|528aa|up_1|CP023407.1_6205229_6206813_+	TIGR01117, methylmalonyl-CoA_decarboxylase_alpha-subunit, methylmalonyl-CoA decarboxylase alpha subunit	NA|63aa|up_0|CP023407.1_6206848_6207037_+	pfam13822, ACC_epsilon, Acyl-CoA carboxylase epsilon subunit	NA|194aa|down_0|CP023407.1_6207375_6207957_-	COG2229, COG2229, Predicted GTPase [General function prediction only]	NA|191aa|down_1|CP023407.1_6207937_6208510_-	pfam05331, DUF742, Protein of unknown function (DUF742)	NA|138aa|down_2|CP023407.1_6208604_6209018_-	pfam03259, Robl_LC7, Roadblock/LC7 domain	NA|1088aa|down_3|CP023407.1_6209028_6212292_-	pfam08376, NIT, Nitrate and nitrite sensing	NA|197aa|down_4|CP023407.1_6212667_6213258_-	COG2229, COG2229, Predicted GTPase [General function prediction only]	NA|132aa|down_5|CP023407.1_6213238_6213634_-	pfam05331, DUF742, Protein of unknown function (DUF742)	NA|138aa|down_6|CP023407.1_6213745_6214159_-	pfam03259, Robl_LC7, Roadblock/LC7 domain	NA|1269aa|down_7|CP023407.1_6214168_6217975_-	pfam08376, NIT, Nitrate and nitrite sensing	NA|58aa|down_8|CP023407.1_6218595_6218769_+	NA	NA|262aa|down_9|CP023407.1_6218929_6219715_+	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism]
