The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP020872	Dickeya fangzhongdai strain PA1 chromosome, complete genome	4979223	888007	895927	4979223		Vibrio_phage(16.67%)	7	NA	NA
AYH46944.1|888007_888295_-	DNA-binding protein	NA	A0A2I7S995	Vibrio_phage	70.8	2.5e-18
AYH46945.1|888656_889346_+	LuxR family transcriptional regulator	NA	Q2A088	Sodalis_phage	30.5	3.7e-12
AYH46946.1|889361_890672_+	cytosine permease	NA	NA	NA	NA	NA
AYH46947.1|890881_891781_+	peroxidase	NA	S4VXK8	Pandoravirus	30.5	2.0e-21
AYH46948.1|891862_892744_+	cysteine synthase B	NA	A0A1X9I5F1	Streptococcus_phage	40.3	2.7e-52
AYH46949.1|892759_894706_-	macrolide ABC transporter permease/ATP-binding protein MacB	NA	G9BWD6	Planktothrix_phage	41.6	8.5e-38
AYH46950.1|894709_895927_-	efflux transporter periplasmic adaptor subunit	NA	A0A140XAI1	Dickeya_phage	95.6	3.6e-50
>prophage 2
CP020872	Dickeya fangzhongdai strain PA1 chromosome, complete genome	4979223	1014383	1025029	4979223	integrase	Clostridioides_phage(16.67%)	9	1011349:1011364	1037091:1037106
1011349:1011364	attL	AAACCAGCGCCAGCGC	NA	NA	NA	NA
AYH47035.1|1014383_1015526_+	cell filamentation protein Fic	NA	A0A1V0E025	Clostridioides_phage	29.9	1.7e-09
AYH47036.1|1015748_1015991_+	regulator	NA	A0A2I7S995	Vibrio_phage	57.1	1.9e-16
AYH47037.1|1016316_1016541_+	hypothetical protein	NA	NA	NA	NA	NA
AYH47038.1|1016658_1017783_+|integrase	integrase	integrase	A0A1L7DQ84	Ralstonia_phage	37.6	2.4e-40
AYH47039.1|1018034_1019930_+	SAM-dependent methyltransferase	NA	P95687	Staphylococcus_phage	30.2	2.0e-63
AYH47040.1|1019907_1020879_+	hypothetical protein	NA	NA	NA	NA	NA
AYH47041.1|1021302_1021536_-	hypothetical protein	NA	NA	NA	NA	NA
AYH47042.1|1021582_1022152_-	DNA-invertase	NA	A0A0C4UR34	Shigella_phage	72.7	4.2e-70
AYH47043.1|1022407_1025029_+	SAM-dependent methyltransferase	NA	Q6NE04	Leptospira_phage	39.5	5.0e-174
1037091:1037106	attR	AAACCAGCGCCAGCGC	NA	NA	NA	NA
>prophage 3
CP020872	Dickeya fangzhongdai strain PA1 chromosome, complete genome	4979223	1478301	1487375	4979223		Bacillus_phage(33.33%)	7	NA	NA
AYH47425.1|1478301_1479729_+	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA	A0A1V0SH58	Hokovirus	30.2	4.5e-52
AYH47426.1|1479742_1481116_+	phosphomannomutase	NA	A0A127AWJ1	Bacillus_phage	27.4	4.6e-30
AYH47427.1|1481221_1482229_+	NAD-dependent epimerase	NA	E3SLG9	Synechococcus_phage	29.7	2.5e-09
AYH50228.1|1482465_1483632_+	UDP-glucose 6-dehydrogenase	NA	O41091	Paramecium_bursaria_Chlorella_virus	56.6	4.7e-116
AYH47428.1|1483715_1484615_+	GalU regulator GalF	NA	A0A127AW70	Bacillus_phage	41.8	3.8e-49
AYH47429.1|1484793_1485783_+	hypothetical protein	NA	NA	NA	NA	NA
AYH47430.1|1485968_1487375_+	phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating)	NA	A0A1D8KPW3	Synechococcus_phage	29.4	4.7e-30
>prophage 4
CP020872	Dickeya fangzhongdai strain PA1 chromosome, complete genome	4979223	2630222	2639812	4979223	tRNA	Tupanvirus(33.33%)	10	NA	NA
AYH48309.1|2630222_2631047_+	NAD(+) synthetase	NA	G3MA24	Bacillus_virus	53.5	1.4e-69
AYH48310.1|2631154_2632048_+	EamA family transporter	NA	NA	NA	NA	NA
AYH48311.1|2632121_2632529_+	hypothetical protein	NA	NA	NA	NA	NA
AYH48312.1|2632567_2632867_-	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	40.0	7.2e-13
AYH48313.1|2632870_2635258_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	A0A1L3IZU3	BeAn_58058_virus	25.8	1.4e-05
AYH48314.1|2635271_2636255_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2K9L3A8	Tupanvirus	39.0	7.6e-35
AYH48315.1|2636643_2637000_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
AYH48316.1|2637043_2637241_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
AYH48317.1|2637337_2637880_-	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	32.5	7.4e-16
AYH48318.1|2637883_2639812_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	36.6	1.4e-128
>prophage 5
CP020872	Dickeya fangzhongdai strain PA1 chromosome, complete genome	4979223	2813831	2895935	4979223	protease,tRNA,tail,plate	Escherichia_phage(27.59%)	65	NA	NA
AYH48452.1|2813831_2815853_-|tail,protease	tail-specific protease	tail,protease	A0A0R6PIZ1	Moraxella_phage	34.7	1.3e-86
AYH48453.1|2815872_2816604_-	RNA chaperone ProQ	NA	NA	NA	NA	NA
AYH48454.1|2816688_2817195_-	Free methionine-R-sulfoxide reductase	NA	NA	NA	NA	NA
AYH48455.1|2817494_2818733_+	hypothetical protein	NA	NA	NA	NA	NA
AYH48456.1|2818749_2821380_+	MCE family protein	NA	NA	NA	NA	NA
AYH48457.1|2821489_2822938_+	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	NA	NA	NA	NA	NA
AYH48458.1|2823027_2823219_+	hypothetical protein	NA	NA	NA	NA	NA
AYH48459.1|2823319_2825317_-	methyl-accepting chemotaxis protein	NA	NA	NA	NA	NA
AYH48460.1|2826247_2827090_-	phage repressor protein CI	NA	Q6K1G0	Salmonella_virus	55.7	2.8e-86
AYH48461.1|2827283_2827679_+	hypothetical protein	NA	NA	NA	NA	NA
AYH48462.1|2827681_2828212_+	replication protein B	NA	A0A0F7LBQ6	Escherichia_phage	46.6	4.1e-35
AYH48463.1|2828332_2828548_+	hypothetical protein	NA	NA	NA	NA	NA
AYH48464.1|2828547_2828772_+	hypothetical protein	NA	Q6K1F5	Salmonella_virus	53.5	2.4e-13
AYH48465.1|2828872_2830999_+	replication protein	NA	A0A0F7LBQ2	Escherichia_phage	47.1	4.1e-179
AYH48466.1|2831062_2831284_+	hypothetical protein	NA	NA	NA	NA	NA
AYH48467.1|2831836_2832040_+|tail	phage tail protein	tail	A0A218M4L8	Erwinia_phage	65.7	5.4e-20
AYH48468.1|2832115_2832577_+|tail	phage tail protein	tail	U5N0S7	Enterobacteria_phage	45.1	3.0e-26
AYH48469.1|2833284_2833728_+	hypothetical protein	NA	NA	NA	NA	NA
AYH48470.1|2833768_2833951_+	hypothetical protein	NA	NA	NA	NA	NA
AYH48471.1|2835096_2836005_+|plate	baseplate assembly protein	plate	Q858V6	Yersinia_virus	74.8	3.2e-120
AYH48472.1|2836981_2838103_+|tail	phage tail protein	tail	M1TAS6	Escherichia_phage	49.9	5.9e-100
AYH48473.1|2842131_2842584_-|tail	phage tail protein	tail	M1TAS6	Escherichia_phage	52.9	4.5e-35
AYH48474.1|2842608_2843178_+	DNA-invertase	NA	A0A286S1P7	Klebsiella_phage	78.5	3.9e-76
AYH48475.1|2843352_2843928_+|tail	phage tail protein	tail	M1TAS6	Escherichia_phage	47.6	6.9e-28
AYH48476.1|2843930_2844542_+|tail	phage tail protein	tail	K7PMH7	Enterobacteria_phage	37.8	3.3e-28
AYH48477.1|2844766_2845936_+|tail	phage tail protein	tail	S4TRX2	Salmonella_phage	82.9	3.0e-187
AYH48478.1|2845950_2846469_+|tail	phage major tail tube protein	tail	S4TNZ0	Salmonella_phage	78.5	4.2e-77
AYH48479.1|2846529_2846820_+	hypothetical protein	NA	A0A0F7LDQ8	Escherichia_phage	59.6	2.8e-22
AYH48480.1|2846852_2846972_+|tail	GpE family phage tail protein	tail	A0A0F7LCR6	Escherichia_phage	77.1	1.9e-09
AYH48481.1|2846982_2848098_+	hypothetical protein	NA	NA	NA	NA	NA
AYH48482.1|2848109_2848604_+|tail	phage tail protein	tail	Q6K1G5	Salmonella_virus	58.7	3.6e-41
AYH48483.1|2848600_2849779_+	late control D family protein	NA	Q6K1G4	Salmonella_virus	43.0	8.7e-78
AYH48484.1|2849875_2850067_+	late control protein B	NA	A0A2I8TV89	Erwinia_phage	66.7	6.8e-17
AYH48485.1|2854132_2855821_+	methyl-accepting chemotaxis protein II	NA	NA	NA	NA	NA
AYH48486.1|2855918_2857157_-	cell wall anchor protein	NA	NA	NA	NA	NA
AYH48487.1|2858053_2859598_+	hypothetical protein	NA	A0A1B0V854	Salmonella_phage	48.8	5.4e-35
AYH48488.1|2859661_2859961_-	hypothetical protein	NA	NA	NA	NA	NA
AYH48489.1|2860259_2860946_-	serine/threonine-protein phosphatase	NA	K7P6H8	Enterobacteria_phage	57.0	1.7e-73
AYH48490.1|2861047_2862322_+	chloride channel protein	NA	NA	NA	NA	NA
AYH48491.1|2862375_2863977_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AYH48492.1|2864070_2864754_-	peptide ABC transporter ATP-binding protein	NA	A7J887	Paramecium_bursaria_Chlorella_virus	25.3	3.2e-08
AYH48493.1|2864746_2865595_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.1	9.2e-05
AYH48494.1|2865581_2866451_-	peptide ABC transporter permease	NA	NA	NA	NA	NA
AYH48495.1|2866447_2867488_-	peptide ABC transporter permease	NA	NA	NA	NA	NA
AYH48496.1|2867629_2868307_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
AYH48497.1|2868866_2869967_+	sodium-potassium/proton antiporter ChaA	NA	NA	NA	NA	NA
AYH50307.1|2870343_2872059_+	C4-dicarboxylic acid transporter DauA	NA	A0A2H4J153	uncultured_Caudovirales_phage	26.9	2.1e-32
AYH48498.1|2872112_2872553_-	hypothetical protein	NA	NA	NA	NA	NA
AYH48499.1|2872793_2873537_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AYH48500.1|2873533_2874889_+	two-component sensor histidine kinase	NA	NA	NA	NA	NA
AYH48501.1|2874964_2875603_+	acid-shock protein	NA	NA	NA	NA	NA
AYH48502.1|2875964_2876783_+|protease	serine protease	protease	NA	NA	NA	NA
AYH48503.1|2877040_2880928_-	ATP-dependent RNA helicase HrpA	NA	A0A1V0SBU4	Catovirus	26.4	2.0e-54
AYH48504.1|2881246_2881852_+	FMN-dependent NADH-azoreductase	NA	NA	NA	NA	NA
AYH48505.1|2881932_2882208_-	hypothetical protein	NA	NA	NA	NA	NA
AYH48506.1|2882254_2884858_-	hypothetical protein	NA	NA	NA	NA	NA
AYH48507.1|2885164_2886718_+	chemotaxis protein	NA	A0A1B0V854	Salmonella_phage	55.1	4.3e-40
AYH48508.1|2886923_2887916_+	2-hydroxyacid dehydrogenase	NA	M1HUT5	Acanthocystis_turfacea_Chlorella_virus	41.9	4.5e-67
AYH48509.1|2887962_2888241_-	hypothetical protein	NA	NA	NA	NA	NA
AYH48510.1|2888571_2890536_+	methyl-accepting chemotaxis protein	NA	NA	NA	NA	NA
AYH48511.1|2890645_2891143_-	hypothetical protein	NA	NA	NA	NA	NA
AYH48512.1|2892040_2893783_+	hypothetical protein	NA	NA	NA	NA	NA
AYH48513.1|2893930_2894380_+	hypothetical protein	NA	NA	NA	NA	NA
AYH48514.1|2894437_2894875_+	hypothetical protein	NA	NA	NA	NA	NA
AYH48515.1|2894993_2895935_+|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	92.2	6.4e-140
>prophage 6
CP020872	Dickeya fangzhongdai strain PA1 chromosome, complete genome	4979223	4661371	4711509	4979223	protease,tRNA,tail	Erwinia_phage(25.0%)	42	NA	NA
AYH49912.1|4661371_4662898_+|protease	ATP-dependent protease	protease	NA	NA	NA	NA
AYH49913.1|4662960_4663299_-	hypothetical protein	NA	NA	NA	NA	NA
AYH49914.1|4663418_4664243_+	transcriptional regulator HdfR	NA	NA	NA	NA	NA
AYH49915.1|4670337_4671210_-	glutamate racemase	NA	NA	NA	NA	NA
AYH50412.1|4671154_4673053_-	TonB-dependent vitamin B12 receptor	NA	A0A0P0I887	Acinetobacter_phage	28.7	2.1e-09
AYH49916.1|4673462_4674566_+|tRNA	tRNA (uridine(54)-C5)-methyltransferase TrmA	tRNA	NA	NA	NA	NA
AYH49917.1|4674578_4674950_-	hypothetical protein	NA	NA	NA	NA	NA
AYH49918.1|4674964_4675603_-	DNA-binding transcriptional regulator FabR	NA	NA	NA	NA	NA
AYH49919.1|4675803_4677210_+	NAD(P)(+) transhydrogenase	NA	NA	NA	NA	NA
AYH49920.1|4677247_4678165_-	DNA-binding transcriptional regulator OxyR	NA	NA	NA	NA	NA
AYH49921.1|4678327_4679059_+	glutathione peroxidase	NA	A0A1D8KSL1	Synechococcus_phage	58.5	1.4e-46
AYH49922.1|4679233_4680130_-	5,10-methylenetetrahydrofolate reductase	NA	NA	NA	NA	NA
AYH49923.1|4680484_4682920_-	bifunctional aspartate kinase/homoserine dehydrogenase II	NA	NA	NA	NA	NA
AYH49924.1|4682922_4684083_-	cystathionine gamma-synthase	NA	NA	NA	NA	NA
AYH49925.1|4684271_4684589_+	transcriptional repressor protein MetJ	NA	NA	NA	NA	NA
AYH49926.1|4684722_4684938_-	50S ribosomal protein L31	NA	NA	NA	NA	NA
AYH50413.1|4685213_4687412_+	primosomal protein N'	NA	NA	NA	NA	NA
AYH49927.1|4687846_4688917_+	DNA-binding transcriptional regulator CytR	NA	NA	NA	NA	NA
AYH49928.1|4688968_4689895_+	cell division protein FtsN	NA	NA	NA	NA	NA
AYH49929.1|4689980_4690511_+|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
AYH49930.1|4690520_4691852_+|protease	ATP-dependent protease ATP-binding subunit HslU	protease	A0A173GFL6	Erwinia_phage	28.8	1.3e-45
AYH50414.1|4691991_4692909_+	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA	NA
AYH49931.1|4693067_4693553_+	ribonuclease E activity regulator RraA	NA	NA	NA	NA	NA
AYH49932.1|4693617_4693860_-	septal ring assembly protein ZapB	NA	NA	NA	NA	NA
AYH49933.1|4694410_4695256_+	aquaporin	NA	M1HWZ0	Paramecium_bursaria_Chlorella_virus	27.7	2.4e-13
AYH49934.1|4695283_4696795_+	glycerol kinase	NA	NA	NA	NA	NA
AYH49935.1|4696927_4697938_+	fructose-bisphosphatase class II	NA	NA	NA	NA	NA
AYH49936.1|4698047_4698794_+	ferredoxin--NADP(+) reductase	NA	NA	NA	NA	NA
AYH49937.1|4698807_4699233_-	hypothetical protein	NA	NA	NA	NA	NA
AYH49938.1|4699378_4699975_+	hypothetical protein	NA	NA	NA	NA	NA
AYH49939.1|4700116_4700887_+	triose-phosphate isomerase	NA	NA	NA	NA	NA
AYH49940.1|4701039_4702464_+	alkaline phosphatase	NA	NA	NA	NA	NA
AYH49941.1|4702561_4703662_-	agmatine deiminase	NA	M1I5R4	Acanthocystis_turfacea_Chlorella_virus	49.2	1.7e-96
AYH49942.1|4703665_4704550_-	N-carbamoylputrescine amidase	NA	A7IVZ1	Paramecium_bursaria_Chlorella_virus	51.2	1.4e-80
AYH49943.1|4704573_4704828_+	hypothetical protein	NA	NA	NA	NA	NA
AYH49944.1|4704887_4705850_-	ATP-dependent 6-phosphofructokinase	NA	NA	NA	NA	NA
AYH49945.1|4706107_4707010_-	cation-efflux pump FieF	NA	NA	NA	NA	NA
AYH49946.1|4707139_4707610_-	DNA-binding protein	NA	NA	NA	NA	NA
AYH49947.1|4707812_4708277_+	DNA mismatch repair protein MutT	NA	NA	NA	NA	NA
AYH49948.1|4708273_4708894_-|tail	phage tail protein	tail	NA	NA	NA	NA
AYH49949.1|4708893_4710030_-|tail	phage tail protein	tail	M1TAS6	Escherichia_phage	42.2	7.3e-98
AYH49950.1|4710390_4711509_-|tail	phage tail protein	tail	A0A2I8TVA9	Erwinia_phage	50.7	2.0e-92
