The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP026983	Pectobacterium parmentieri strain IFB5604 chromosome, complete genome	4877201	279792	289957	4877201	terminase,portal,tail,head,protease,capsid	uncultured_Caudovirales_phage(88.89%)	12	NA	NA
AYH12961.1|279792_281556_+	DNA primase	NA	Q7M2A8	Enterobacteria_phage	50.1	4.1e-132
AYH12962.1|281837_282173_+	hypothetical protein	NA	NA	NA	NA	NA
AYH12963.1|282220_282733_-	hypothetical protein	NA	NA	NA	NA	NA
AYH16777.1|282751_283357_-	hypothetical protein	NA	NA	NA	NA	NA
AYH12964.1|283641_284814_+|capsid	phage major capsid protein	capsid	A0A2H4JED2	uncultured_Caudovirales_phage	80.9	1.1e-173
AYH12965.1|284857_285418_+|head,protease	HK97 family phage prohead protease	head,protease	A0A2H4JB68	uncultured_Caudovirales_phage	84.4	1.2e-85
AYH12966.1|285419_286631_+|portal	phage portal protein	portal	A0A2H4JFJ9	uncultured_Caudovirales_phage	81.4	1.5e-194
AYH12967.1|286627_286966_+|head,tail	head-tail adaptor	head,tail	A0A2H4JHK5	uncultured_Caudovirales_phage	55.4	9.0e-28
AYH12968.1|286958_287252_+	hypothetical protein	NA	A0A2H4JD08	uncultured_Caudovirales_phage	81.4	2.3e-40
AYH12969.1|287251_287695_+	HNH endonuclease	NA	A0A2H4JAS8	uncultured_Caudovirales_phage	69.4	4.1e-57
AYH12970.1|287955_288309_+|terminase	phage terminase small subunit P27 family	terminase	A0A2H4JHS3	uncultured_Caudovirales_phage	93.2	7.3e-57
AYH12971.1|288295_289957_+|terminase	terminase large subunit	terminase	A0A2H4JB64	uncultured_Caudovirales_phage	83.4	2.3e-281
>prophage 2
CP026983	Pectobacterium parmentieri strain IFB5604 chromosome, complete genome	4877201	1183881	1189285	4877201		Mycobacterium_phage(33.33%)	6	NA	NA
AYH13706.1|1183881_1184346_-	ribonuclease HI	NA	J9Q745	Salmonella_phage	57.3	1.7e-48
AYH13707.1|1184401_1185139_+	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	38.4	5.0e-39
AYH13708.1|1185496_1186459_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	R4TBI6	Mycobacterium_phage	74.2	1.9e-139
AYH13709.1|1186483_1188631_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	V9VI16	Lactococcus_phage	51.0	4.9e-204
AYH13710.1|1188627_1189035_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A220BYR7	Staphylococcus_phage	27.7	1.4e-06
AYH13711.1|1189045_1189285_-	glutaredoxin-like protein NrdH	NA	V5UN81	Mycobacterium_phage	58.1	3.5e-18
>prophage 3
CP026983	Pectobacterium parmentieri strain IFB5604 chromosome, complete genome	4877201	2151384	2161378	4877201	tRNA	Tupanvirus(33.33%)	10	NA	NA
AYH14492.1|2151384_2153313_+|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	36.4	4.4e-127
AYH14493.1|2153315_2153858_+	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	33.5	2.8e-15
AYH14494.1|2153971_2154169_+	50S ribosomal protein L35	NA	NA	NA	NA	NA
AYH14495.1|2154212_2154569_+	50S ribosomal protein L20	NA	NA	NA	NA	NA
AYH14496.1|2154897_2155881_+|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2K9L3A8	Tupanvirus	39.3	4.5e-35
AYH14497.1|2155895_2158283_+|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	A0A1L3IZU3	BeAn_58058_virus	28.9	5.1e-08
AYH14498.1|2158287_2158584_+	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	40.0	5.5e-13
AYH14499.1|2158651_2159113_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AYH14500.1|2159145_2159523_-	nitrous oxide-stimulated promoter family protein	NA	NA	NA	NA	NA
AYH14501.1|2159659_2161378_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	31.0	1.1e-57
>prophage 4
CP026983	Pectobacterium parmentieri strain IFB5604 chromosome, complete genome	4877201	2869703	2926647	4877201	protease,plate,tail,bacteriocin	Burkholderia_phage(40.91%)	62	NA	NA
AYH16897.1|2869703_2870000_-|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
AYH15098.1|2870078_2870279_-	hypothetical protein	NA	NA	NA	NA	NA
AYH16898.1|2870566_2870782_+	hypothetical protein	NA	NA	NA	NA	NA
AYH15099.1|2871530_2872190_+	transmembrane protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	48.8	2.7e-44
AYH15100.1|2872301_2872631_+	sulfurtransferase TusE	NA	NA	NA	NA	NA
AYH15101.1|2872641_2872920_-	acylphosphatase	NA	NA	NA	NA	NA
AYH15102.1|2873153_2873462_+	heat shock protein HspQ	NA	NA	NA	NA	NA
AYH15103.1|2873542_2873956_-	hypothetical protein	NA	NA	NA	NA	NA
AYH15104.1|2874151_2874676_+	DUF2057 domain-containing protein	NA	NA	NA	NA	NA
AYH15105.1|2874813_2875272_+	methylglyoxal synthase	NA	NA	NA	NA	NA
AYH15106.1|2875350_2877408_-	DNA helicase IV	NA	A7KV33	Bacillus_phage	25.7	2.2e-15
AYH15107.1|2877594_2878041_+	YccF domain-containing protein	NA	NA	NA	NA	NA
AYH15108.1|2878061_2880197_+	TIGR01666 family membrane protein	NA	NA	NA	NA	NA
AYH15109.1|2880212_2880833_-	competence-specific regulator	NA	NA	NA	NA	NA
AYH15110.1|2881055_2881562_+	cell division inhibitor SulA	NA	NA	NA	NA	NA
AYH15111.1|2881924_2883007_+	porin OmpA	NA	NA	NA	NA	NA
AYH15112.1|2883159_2883621_-	macrodomain Ter protein MatP	NA	NA	NA	NA	NA
AYH15113.1|2883797_2885567_+|protease	Lon protease family protein	protease	NA	NA	NA	NA
AYH15114.1|2885658_2886177_+	bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase	NA	NA	NA	NA	NA
AYH15115.1|2886273_2886927_-	DUF533 domain-containing protein	NA	NA	NA	NA	NA
AYH15116.1|2887421_2888060_+	hypothetical protein	NA	NA	NA	NA	NA
AYH15117.1|2888805_2889117_+	hypothetical protein	NA	NA	NA	NA	NA
AYH15118.1|2889681_2889927_+	DUF2543 domain-containing protein	NA	NA	NA	NA	NA
AYH15119.1|2890181_2890721_+	DUF2058 domain-containing protein	NA	NA	NA	NA	NA
AYH15120.1|2891021_2891504_+	cold shock domain-containing protein	NA	NA	NA	NA	NA
AYH15121.1|2891577_2892618_-	hypothetical protein	NA	NA	NA	NA	NA
AYH15122.1|2893063_2893393_-	hypothetical protein	NA	NA	NA	NA	NA
AYH15123.1|2893450_2893987_-	DUF2892 domain-containing protein	NA	NA	NA	NA	NA
AYH15124.1|2894360_2895761_+	FMN/FAD transporter	NA	NA	NA	NA	NA
AYH15125.1|2895808_2896978_-	MFS transporter	NA	NA	NA	NA	NA
AYH15126.1|2897268_2897784_-	outer membrane protein OmpX	NA	H6WZM8	Escherichia_phage	33.5	2.0e-15
AYH15127.1|2898160_2899042_+	threonine/homoserine exporter RhtA	NA	NA	NA	NA	NA
AYH15128.1|2899055_2899595_-	adenylate kinase	NA	A0A097BYE2	Leuconostoc_phage	37.1	4.3e-16
AYH15129.1|2899908_2900412_+	DNA starvation/stationary phase protection protein	NA	A0A222YYG6	Streptomyces_phage	28.9	1.4e-08
AYH15130.1|2900810_2901557_+	glutamine ABC transporter substrate-binding protein GlnH	NA	NA	NA	NA	NA
AYH15131.1|2901583_2902243_+	glutamine ABC transporter permease GlnP	NA	NA	NA	NA	NA
AYH15132.1|2902239_2902962_+	glutamine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	42.7	5.0e-36
AYH15133.1|2903001_2904870_-	peptidase M3	NA	NA	NA	NA	NA
AYH15134.1|2904956_2905925_-	DNA-binding protein YbiB	NA	NA	NA	NA	NA
AYH15135.1|2906703_2906994_+	hypothetical protein	NA	NA	NA	NA	NA
AYH15136.1|2908755_2909337_-|tail	phage tail protein I	tail	A4JWL7	Burkholderia_virus	60.6	4.8e-61
AYH15137.1|2909329_2910433_-|plate	baseplate protein	plate	Q6QI99	Burkholderia_phage	54.6	2.3e-104
AYH15138.1|2910423_2910771_-|plate	baseplate protein	plate	Q6QIA0	Burkholderia_phage	62.0	9.5e-33
AYH15139.1|2910830_2911412_-|plate	phage baseplate assembly protein V	plate	Q6QIA1	Burkholderia_phage	45.6	1.0e-23
AYH15140.1|2911408_2912563_-	phage protein D	NA	Q6QIA2	Burkholderia_phage	52.6	5.7e-90
AYH15141.1|2912550_2912763_-	hypothetical protein	NA	A4JWL2	Burkholderia_virus	57.1	2.6e-17
AYH15142.1|2912762_2913680_-	hypothetical protein	NA	Q6QIA4	Burkholderia_phage	45.9	6.0e-50
AYH16899.1|2913679_2916127_-|tail	phage tail tape measure protein	tail	A4JWL0	Burkholderia_virus	30.5	3.0e-88
AYH16900.1|2916349_2916493_-|tail	GpE family phage tail protein	tail	NA	NA	NA	NA
AYH15143.1|2916437_2916758_-|tail	phage tail assembly protein	tail	NA	NA	NA	NA
AYH15144.1|2916900_2917425_-|tail	phage major tail tube protein	tail	Q6QIA9	Burkholderia_phage	66.7	9.5e-69
AYH15145.1|2917424_2918852_-|tail	phage tail protein	tail	A4JWK5	Burkholderia_virus	73.6	9.5e-204
AYH15146.1|2918841_2919039_-	hypothetical protein	NA	Q6QIB1	Burkholderia_phage	58.8	5.4e-09
AYH15147.1|2919035_2919503_-	hypothetical protein	NA	NA	NA	NA	NA
AYH15148.1|2919746_2920058_-	hypothetical protein	NA	Q6QIC3	Burkholderia_phage	45.5	8.3e-20
AYH15149.1|2920050_2920380_-	hypothetical protein	NA	Q6QIC4	Burkholderia_phage	50.0	2.5e-19
AYH15150.1|2920369_2921044_-	hypothetical protein	NA	NA	NA	NA	NA
AYH15151.1|2921033_2921645_-	lytic transglycosylase domain-containing protein	NA	Q5ZQZ1	Pseudomonas_phage	56.0	2.1e-59
AYH15152.1|2921646_2921976_-	hypothetical protein	NA	A4JWP3	Burkholderia_virus	58.3	1.2e-24
AYH15153.1|2922192_2923560_-	peptidase	NA	NA	NA	NA	NA
AYH15154.1|2923562_2924891_-	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA	NA
AYH15155.1|2924919_2926647_-	type I secretion system permease/ATPase	NA	W8CYL7	Bacillus_phage	33.5	5.6e-25
>prophage 5
CP026983	Pectobacterium parmentieri strain IFB5604 chromosome, complete genome	4877201	3044187	3050665	4877201		Escherichia_phage(33.33%)	6	NA	NA
AYH15255.1|3044187_3045594_-	NADP-dependent phosphogluconate dehydrogenase	NA	A0A1D7RI04	Synechococcus_phage	30.1	3.9e-32
AYH15256.1|3045825_3046722_-	GalU regulator GalF	NA	A0A127AW70	Bacillus_phage	39.9	7.1e-48
AYH15257.1|3046955_3047825_+	glucose-1-phosphate thymidylyltransferase	NA	I7I009	Enterobacteria_phage	68.1	1.4e-109
AYH15258.1|3047826_3048363_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	58.8	3.1e-59
AYH15259.1|3048359_3049205_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	38.4	3.2e-42
AYH15260.1|3049855_3050665_-	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	33.6	1.4e-10
>prophage 6
CP026983	Pectobacterium parmentieri strain IFB5604 chromosome, complete genome	4877201	4240080	4248653	4877201		Dickeya_phage(42.86%)	7	NA	NA
AYH16230.1|4240080_4241205_+	pectate lyase	NA	A0A140XB77	Dickeya_phage	71.7	1.7e-54
AYH16231.1|4241753_4242878_+	pectate lyase	NA	A0A140XB77	Dickeya_phage	73.2	1.8e-56
AYH16232.1|4243585_4244710_+	pectate lyase	NA	A0A140XB77	Dickeya_phage	77.5	1.7e-59
AYH16233.1|4244872_4246150_+	pectate lyase	NA	A0A1B1IPS8	uncultured_Mediterranean_phage	32.9	2.9e-34
AYH16234.1|4246234_4246804_-	peptidylprolyl isomerase A	NA	A0A1V0S9I2	Catovirus	31.9	3.9e-07
AYH16235.1|4247007_4247817_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.9	1.3e-29
AYH16236.1|4247828_4248653_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.8e-13
