assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003627855.1_ASM362785v1	CP032515	Escherichia coli strain 118UI chromosome, complete genome	1	283718-283859	1	CRISPRCasFinder	no	RT	DEDDh,RT,DinG,cas3,cas14j,c2c9_V-U4,csa3,cas2,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	Unclear	TGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAAC	41	0	0	NA	NA	NA	1	1	Orphan	DEDDh,RT,DinG,cas3,cas14j,c2c9_V-U4,csa3,cas2,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	NA,NA	NA|171aa|up_9|CP032515.1_273348_273861_+	TIGR03765, conserved_hypothetical_protein, integrating conjugative element protein, PFL_4695 family	NA|257aa|up_8|CP032515.1_274132_274903_-	PRK10438, PRK10438, C-N hydrolase family amidase; Provisional	NA|158aa|up_7|CP032515.1_275056_275530_+	PRK09993, PRK09993, C-lysozyme inhibitor; Provisional	NA|815aa|up_6|CP032515.1_275572_278017_-	PRK09463, fadE, acyl-CoA dehydrogenase; Reviewed	NA|193aa|up_5|CP032515.1_278256_278835_+	PRK00414, gmhA, D-sedoheptulose 7-phosphate isomerase	NA|256aa|up_4|CP032515.1_279040_279808_+	pfam13230, GATase_4, Glutamine amidotransferases class-II	NA|247aa|up_3|CP032515.1_279778_280519_-	COG3034, COG3034, Uncharacterized protein conserved in bacteria [Function unknown]	NA|253aa|up_2|CP032515.1_280810_281569_+	COG0791, Spr, Cell wall-associated hydrolases (invasion-associated proteins) [Cell envelope biogenesis, outer membrane]	NA|166aa|up_1|CP032515.1_281745_282243_+	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|405aa|up_0|CP032515.1_282401_283615_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|698aa|down_0|CP032515.1_283942_286036_-	COG1298, FlhA, Flagellar biosynthesis pathway, component FlhA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|380aa|down_1|CP032515.1_286019_287159_-	PRK05702, flhB, flagellar type III secretion system protein FlhB	NA|261aa|down_2|CP032515.1_287148_287931_-	COG1684, FliR, Flagellar biosynthesis pathway, component FliR [Cell motility and secretion / Intracellular trafficking and secretion]	NA|91aa|down_3|CP032515.1_287932_288205_-	COG1987, FliQ, Flagellar biosynthesis pathway, component FliQ [Cell motility and secretion / Intracellular trafficking and secretion]	NA|251aa|down_4|CP032515.1_288207_288960_-	PRK05699, fliP, flagellar biosynthesis protein FliP; Reviewed	NA|124aa|down_5|CP032515.1_288956_289328_-	TIGR02480, Flagellar_motor_switch_protein_FliN, flagellar motor switch protein FliN	NA|284aa|down_6|CP032515.1_289320_290172_-	pfam01052, FliMN_C, Type III flagellar switch regulator (C-ring) FliN C-term	NA|327aa|down_7|CP032515.1_290559_291540_+	COG3829, RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]	NA|114aa|down_8|CP032515.1_291554_291896_+	pfam02049, FliE, Flagellar hook-basal body complex protein FliE	NA|549aa|down_9|CP032515.1_291900_293547_+	PRK07193, fliF, flagellar MS-ring protein; Reviewed
GCA_003627855.1_ASM362785v1	CP032515	Escherichia coli strain 118UI chromosome, complete genome	2	859791-859932	2	CRISPRCasFinder	no		DEDDh,RT,DinG,cas3,cas14j,c2c9_V-U4,csa3,cas2,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	Orphan	GCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGAAATGCAG	47	0	0	NA	NA	NA	1	1	Orphan	DEDDh,RT,DinG,cas3,cas14j,c2c9_V-U4,csa3,cas2,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	NA,NA	NA|349aa|up_9|CP032515.1_848055_849102_-	COG3180, AbrB, Putative ammonia monooxygenase [General function prediction only]	NA|354aa|up_8|CP032515.1_849253_850315_-	pfam00419, Fimbrial, Fimbrial protein	NA|244aa|up_7|CP032515.1_850311_851043_-	COG3121, FimC, P pilus assembly protein, chaperone PapD [Cell motility and secretion / Intracellular trafficking and secretion]	NA|817aa|up_6|CP032515.1_851058_853509_-	COG3188, FimD, P pilus assembly protein, porin PapC [Cell motility and secretion / Intracellular trafficking and secretion]	NA|189aa|up_5|CP032515.1_853568_854135_-	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|428aa|up_4|CP032515.1_854524_855808_-	PRK05614, gltA, citrate synthase	NA|130aa|up_3|CP032515.1_856516_856906_+	PRK09487, sdhC, succinate dehydrogenase cytochrome b556 subunit	NA|116aa|up_2|CP032515.1_856899_857247_+	PRK09488, sdhD, succinate dehydrogenase membrane anchor subunit	NA|589aa|up_1|CP032515.1_857246_859013_+	PRK08958, sdhA, succinate dehydrogenase flavoprotein subunit; Reviewed	NA|239aa|up_0|CP032515.1_859028_859745_+	PRK05950, sdhB, succinate dehydrogenase iron-sulfur subunit; Reviewed	NA|934aa|down_0|CP032515.1_860094_862896_+	PRK09404, sucA, 2-oxoglutarate dehydrogenase E1 component; Reviewed	NA|406aa|down_1|CP032515.1_862910_864128_+	PRK05704, PRK05704, 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA|389aa|down_2|CP032515.1_864402_865569_+	PRK00696, sucC, ADP-forming succinate--CoA ligase subunit beta	NA|290aa|down_3|CP032515.1_865568_866438_+	PRK05678, PRK05678, succinyl-CoA synthetase subunit alpha; Validated	NA|117aa|down_4|CP032515.1_866482_866833_+	COG2986, HutH, Histidine ammonia-lyase [Amino acid transport and metabolism]	NA|302aa|down_5|CP032515.1_867103_868009_+	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional	NA|201aa|down_6|CP032515.1_868042_868645_-	PRK05986, PRK05986, cob(I)yrinic acid a,c-diamide adenosyltransferase	NA|551aa|down_7|CP032515.1_868654_870307_-	PRK15392, PRK15392, class I fumarate hydratase	NA|434aa|down_8|CP032515.1_870414_871716_-	COG1301, GltP, Na+/H+-dicarboxylate symporters [Energy production and conversion]	NA|106aa|down_9|CP032515.1_871855_872173_-	pfam14330, DUF4387, Domain of unknown function (DUF4387)
GCA_003627855.1_ASM362785v1	CP032515	Escherichia coli strain 118UI chromosome, complete genome	4	2368418-2368552	4	CRISPRCasFinder	no		DEDDh,RT,DinG,cas3,cas14j,c2c9_V-U4,csa3,cas2,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	Orphan	GGATAAGGCGTTCACGCCGCATCCGACAAACAGCGCCTGATGCGACG	47	0	0	NA	NA	NA	1	1	Orphan	DEDDh,RT,DinG,cas3,cas14j,c2c9_V-U4,csa3,cas2,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	NA|75aa|up_7|CP032515.1_2358580_2358805_+,NA	NA|358aa|up_9|CP032515.1_2355954_2357028_-	pfam13808, DDE_Tnp_1_assoc, DDE_Tnp_1-associated	NA|379aa|up_8|CP032515.1_2357051_2358188_-	pfam13808, DDE_Tnp_1_assoc, DDE_Tnp_1-associated	NA|75aa|up_7|CP032515.1_2358580_2358805_+	NA	NA|298aa|up_6|CP032515.1_2358841_2359735_-	PRK10122, PRK10122, UTP--glucose-1-phosphate uridylyltransferase GalF	NA|465aa|up_5|CP032515.1_2359909_2361304_-	PRK10123, wcaM, putative colanic acid biosynthesis protein; Provisional	NA|407aa|up_4|CP032515.1_2361314_2362535_-	TIGR04005, wcaL, colanic acid biosynthesis glycosyltransferase WcaL	NA|427aa|up_3|CP032515.1_2362531_2363812_-	TIGR04006, wcaK, colanic acid biosynthesis pyruvyl transferase WcaK	NA|493aa|up_2|CP032515.1_2363973_2365452_-	PRK10459, PRK10459, MOP flippase family protein	NA|465aa|up_1|CP032515.1_2365453_2366848_-	PRK10124, PRK10124, putative UDP-glucose lipid carrier transferase; Provisional	NA|457aa|up_0|CP032515.1_2366902_2368273_-	PRK15414, PRK15414, phosphomannomutase	NA|479aa|down_0|CP032515.1_2368553_2369990_-	PRK15460, cpsB, mannose-1-phosphate guanyltransferase; Provisional	NA|408aa|down_1|CP032515.1_2369992_2371216_-	TIGR04007, wcaI, colanic acid biosynthesis glycosyl transferase WcaI	NA|160aa|down_2|CP032515.1_2371212_2371692_-	PRK15434, PRK15434, GDP-mannose mannosyl hydrolase	NA|322aa|down_3|CP032515.1_2371694_2372660_-	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs	NA|374aa|down_4|CP032515.1_2372662_2373784_-	COG1089, Gmd, GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]	NA|183aa|down_5|CP032515.1_2373811_2374360_-	TIGR04008, WcaF, colanic acid biosynthesis acetyltransferase WcaF	NA|249aa|down_6|CP032515.1_2374375_2375122_-	PRK10063, PRK10063, colanic acid biosynthesis glycosyltransferase WcaE	NA|407aa|down_7|CP032515.1_2375247_2376468_-	TIGR04010, WcaD, putative colanic acid polymerase WcaD	NA|406aa|down_8|CP032515.1_2376442_2377660_-	TIGR04015, WcaC, colanic acid biosynthesis glycosyl transferase WcaC	NA|163aa|down_9|CP032515.1_2377656_2378145_-	PRK10191, PRK10191, putative acyl transferase; Provisional
GCA_003627855.1_ASM362785v1	CP032515	Escherichia coli strain 118UI chromosome, complete genome	5	2595331-2595457	5	CRISPRCasFinder	no	c2c9_V-U4	DEDDh,RT,DinG,cas3,cas14j,c2c9_V-U4,csa3,cas2,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	Type V-U4	TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC	39	0	0	NA	NA	NA	1	1	TypeV-U4	DEDDh,RT,DinG,cas3,cas14j,c2c9_V-U4,csa3,cas2,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	NA,NA|357aa|down_5|CP032515.1_2600368_2601439_+	NA|395aa|up_9|CP032515.1_2574344_2575529_+	PRK05790, PRK05790, putative acyltransferase; Provisional	NA|259aa|up_8|CP032515.1_2575602_2576379_-	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown]	NA|550aa|up_7|CP032515.1_2576383_2578033_-	COG5445, COG5445, Predicted secreted protein [Function unknown]	NA|1535aa|up_6|CP032515.1_2578033_2582638_-	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only]	NA|208aa|up_5|CP032515.1_2582571_2583195_-	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown]	NA|563aa|up_4|CP032515.1_2583191_2584880_-	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown]	NA|876aa|up_3|CP032515.1_2585028_2587656_-	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|241aa|up_2|CP032515.1_2587802_2588525_+	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|1238aa|up_1|CP032515.1_2588585_2592299_-	PRK09752, PRK09752, AIDA-I family autotransporter YfaL	NA|762aa|up_0|CP032515.1_2592994_2595280_+	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha	NA|377aa|down_0|CP032515.1_2595513_2596644_+	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed	NA|85aa|down_1|CP032515.1_2596643_2596898_+	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein	NA|217aa|down_2|CP032515.1_2596951_2597602_-	PRK09902, PRK09902, lipopolysaccharide kinase InaA	NA|397aa|down_3|CP032515.1_2597682_2598873_-	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily	NA|293aa|down_4|CP032515.1_2599024_2599903_+	cd05466, PBP2_LTTR_substrate, The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily	NA|357aa|down_5|CP032515.1_2600368_2601439_+	NA	NA|359aa|down_6|CP032515.1_2601659_2602736_-	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional	NA|453aa|down_7|CP032515.1_2602740_2604099_-	PRK11273, glpT, glycerol-3-phosphate transporter	NA|543aa|down_8|CP032515.1_2604371_2606000_+	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A	NA|420aa|down_9|CP032515.1_2605989_2607249_+	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]
GCA_003627855.1_ASM362785v1	CP032515	Escherichia coli strain 118UI chromosome, complete genome	6	3202584-3203710	1,2,6	CRT,PILER-CR,CRISPRCasFinder	no	cas2,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	DEDDh,RT,DinG,cas3,cas14j,c2c9_V-U4,csa3,cas2,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	Type I-E	CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	18,17,17	18	TypeI-E	DEDDh,RT,DinG,cas3,cas14j,c2c9_V-U4,csa3,cas2,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	NA,NA	NA|254aa|up_9|CP032515.1_3194457_3195219_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|350aa|up_8|CP032515.1_3195199_3196249_-	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|160aa|up_7|CP032515.1_3196245_3196725_-	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|237aa|up_6|CP032515.1_3196724_3197435_-	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|104aa|up_5|CP032515.1_3197453_3197765_-	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|108aa|up_4|CP032515.1_3197958_3198282_-	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|202aa|up_3|CP032515.1_3198331_3198937_-	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|476aa|up_2|CP032515.1_3198936_3200364_-	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|303aa|up_1|CP032515.1_3200365_3201274_-	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|346aa|up_0|CP032515.1_3201525_3202563_+	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	cas2|98aa|down_0|CP032515.1_3203806_3204100_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas6e|217aa|down_1|CP032515.1_3205016_3205667_-	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas5|249aa|down_2|CP032515.1_3205648_3206395_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|352aa|down_3|CP032515.1_3206405_3207461_-	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cse2gr11|179aa|down_4|CP032515.1_3207475_3208012_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|521aa|down_5|CP032515.1_3208008_3209571_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas3|900aa|down_6|CP032515.1_3209668_3212368_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|51aa|down_7|CP032515.1_3212562_3212715_-	pfam01848, HOK_GEF, Hok/gef family	NA|245aa|down_8|CP032515.1_3212979_3213714_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|571aa|down_9|CP032515.1_3213787_3215500_-	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit
GCA_003627855.1_ASM362785v1	CP032515	Escherichia coli strain 118UI chromosome, complete genome	7	3229413-3229990	7,2,3	CRISPRCasFinder,CRT,PILER-CR	no	cas3	DEDDh,RT,DinG,cas3,cas14j,c2c9_V-U4,csa3,cas2,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	Unclear	CGGTTTATCCCCGCTGGCGCGGGGAACTC,CGGTTTATCCCCGCTGGCGCGGGGAACTC,CGGTTTATCCCCGCTGGCGCGGGGAACTC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	9,9,9	9	Unclear	DEDDh,RT,DinG,cas3,cas14j,c2c9_V-U4,csa3,cas2,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	NA,NA	NA|424aa|up_9|CP032515.1_3218057_3219329_+	PRK10015, PRK10015, oxidoreductase; Provisional	NA|87aa|up_8|CP032515.1_3219319_3219580_+	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|192aa|up_7|CP032515.1_3219596_3220172_+	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|287aa|up_6|CP032515.1_3220318_3221179_-	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|260aa|up_5|CP032515.1_3221175_3221955_-	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|446aa|up_4|CP032515.1_3221932_3223270_-	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|485aa|up_3|CP032515.1_3223363_3224818_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|262aa|up_2|CP032515.1_3224887_3225673_-	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|426aa|up_1|CP032515.1_3225991_3227269_+	cd06174, MFS, Major Facilitator Superfamily	NA|493aa|up_0|CP032515.1_3227295_3228774_+	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|224aa|down_0|CP032515.1_3230329_3231001_-	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|201aa|down_1|CP032515.1_3231173_3231776_+	COG1704, LemA, Uncharacterized conserved protein [Function unknown]	NA|308aa|down_2|CP032515.1_3231759_3232683_+	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|383aa|down_3|CP032515.1_3232697_3233846_+	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|302aa|down_4|CP032515.1_3233851_3234757_+	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|433aa|down_5|CP032515.1_3234816_3236115_-	PRK00077, eno, enolase; Provisional	NA|546aa|down_6|CP032515.1_3236201_3237839_-	PRK05380, pyrG, CTP synthetase; Validated	NA|264aa|down_7|CP032515.1_3238066_3238858_-	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|745aa|down_8|CP032515.1_3238953_3241188_-	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|434aa|down_9|CP032515.1_3241235_3242537_-	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
GCA_003627855.1_ASM362785v1	CP032515	Escherichia coli strain 118UI chromosome, complete genome	8	3618621-3618771	8	CRISPRCasFinder	no		DEDDh,RT,DinG,cas3,cas14j,c2c9_V-U4,csa3,cas2,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	Orphan	AAGGCGTTCACGCCGCATCCGGCAATCGTGCATAATGCCTGATGCGACGCTG	52	0	0	NA	NA	NA	1	1	Orphan	DEDDh,RT,DinG,cas3,cas14j,c2c9_V-U4,csa3,cas2,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	NA|275aa|up_7|CP032515.1_3609213_3610038_-,NA|62aa|down_8|CP032515.1_3625355_3625541_-	NA|357aa|up_9|CP032515.1_3607540_3608611_-	TIGR04407, LptF_YjgP, LPS export ABC transporter permease LptF	NA|187aa|up_8|CP032515.1_3608641_3609202_-	COG3054, COG3054, Predicted transcriptional regulator [General function prediction only]	NA|275aa|up_7|CP032515.1_3609213_3610038_-	NA	NA|450aa|up_6|CP032515.1_3610037_3611387_-	COG2244, RfbX, Membrane protein involved in the export of O-antigen and teichoic acid [General function prediction only]	NA|253aa|up_5|CP032515.1_3611432_3612191_-	cd01672, TMPK, Thymidine monophosphate kinase (TMPK), also known as thymidylate kinase, catalyzes the phosphorylation of thymidine monophosphate (TMP) to thymidine diphosphate (TDP) utilizing ATP as its preferred phophoryl donor	NA|238aa|up_4|CP032515.1_3612222_3612936_-	cd01672, TMPK, Thymidine monophosphate kinase (TMPK), also known as thymidylate kinase, catalyzes the phosphorylation of thymidine monophosphate (TMP) to thymidine diphosphate (TDP) utilizing ATP as its preferred phophoryl donor	NA|231aa|up_3|CP032515.1_3613109_3613802_+	cd01672, TMPK, Thymidine monophosphate kinase (TMPK), also known as thymidylate kinase, catalyzes the phosphorylation of thymidine monophosphate (TMP) to thymidine diphosphate (TDP) utilizing ATP as its preferred phophoryl donor	NA|500aa|up_2|CP032515.1_3613850_3615350_-	COG0306, PitA, Phosphate/sulphate permeases [Inorganic ion transport and metabolism]	NA|620aa|up_1|CP032515.1_3615641_3617501_-	PRK10507, PRK10507, bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase; Provisional	NA|289aa|up_0|CP032515.1_3617705_3618572_+	PRK11752, PRK11752, putative S-transferase; Provisional	NA|83aa|down_0|CP032515.1_3618803_3619052_-	PRK10413, PRK10413, hydrogenase maturation factor HybG	NA|114aa|down_1|CP032515.1_3619064_3619406_-	PRK12380, PRK12380, hydrogenase/urease nickel incorporation protein	NA|163aa|down_2|CP032515.1_3619398_3619887_-	PRK10465, PRK10465, hydrogenase-2 assembly chaperone	NA|165aa|down_3|CP032515.1_3619879_3620374_-	PRK10466, hybD, HyaD/HybD family hydrogenase maturation endopeptidase	NA|568aa|down_4|CP032515.1_3620373_3622077_-	PRK10467, PRK10467, hydrogenase 2 large subunit; Provisional	NA|393aa|down_5|CP032515.1_3622073_3623252_-	PRK10881, PRK10881, Ni/Fe-hydrogenase cytochrome b subunit	NA|329aa|down_6|CP032515.1_3623241_3624228_-	PRK10882, PRK10882, hydrogenase 2 operon protein HybA	NA|373aa|down_7|CP032515.1_3624230_3625349_-	PRK10468, PRK10468, hydrogenase 2 small subunit; Provisional	NA|62aa|down_8|CP032515.1_3625355_3625541_-	NA	NA|96aa|down_9|CP032515.1_3625537_3625825_-	pfam11115, DUF2623, Protein of unknown function (DUF2623)
GCA_003627855.1_ASM362785v1	CP032515	Escherichia coli strain 118UI chromosome, complete genome	9	4996128-4996262	9	CRISPRCasFinder	no		DEDDh,RT,DinG,cas3,cas14j,c2c9_V-U4,csa3,cas2,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	Orphan	GTGCTGTGTAGGTCGGATAAGGCGTTCATGCCGCATCCG	39	0	0	NA	NA	NA	1	1	Orphan	DEDDh,RT,DinG,cas3,cas14j,c2c9_V-U4,csa3,cas2,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	NA|325aa|up_8|CP032515.1_4987496_4988471_+,NA|118aa|up_7|CP032515.1_4988486_4988840_+,NA|77aa|up_6|CP032515.1_4988826_4989057_+,NA	NA|151aa|up_9|CP032515.1_4986922_4987375_+	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism]	NA|325aa|up_8|CP032515.1_4987496_4988471_+	NA	NA|118aa|up_7|CP032515.1_4988486_4988840_+	NA	NA|77aa|up_6|CP032515.1_4988826_4989057_+	NA	NA|335aa|up_5|CP032515.1_4989157_4990162_-	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional	NA|139aa|up_4|CP032515.1_4990323_4990740_+	PRK11191, PRK11191, ribonuclease E inhibitor RraB	NA|168aa|up_3|CP032515.1_4990785_4991289_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|399aa|up_2|CP032515.1_4991481_4992678_+	COG4269, COG4269, Predicted membrane protein [Function unknown]	NA|952aa|up_1|CP032515.1_4992733_4995589_-	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|148aa|up_0|CP032515.1_4995588_4996032_-	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated	NA|504aa|down_0|CP032515.1_4996287_4997799_-	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|367aa|down_1|CP032515.1_4998065_4999166_+	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional	NA|361aa|down_2|CP032515.1_4999165_5000248_+	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional	NA|501aa|down_3|CP032515.1_5000408_5001911_-	pfam05872, DUF853, Bacterial protein of unknown function (DUF853)	NA|333aa|down_4|CP032515.1_5001988_5002987_-	cd01575, PBP1_GntR, ligand-binding domain of DNA transcription repressor GntR specific for gluconate, a member of the LacI-GalR family of bacterial transcription regulators	NA|440aa|down_5|CP032515.1_5003053_5004373_-	TIGR00791, Gluconate_permease, gluconate transporter	NA|255aa|down_6|CP032515.1_5004434_5005199_-	PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional	NA|344aa|down_7|CP032515.1_5005222_5006254_-	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional	NA|188aa|down_8|CP032515.1_5006470_5007034_+	PRK09825, idnK, gluconokinase	NA|340aa|down_9|CP032515.1_5007037_5008057_-	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)
GCA_003627855.1_ASM362785v1	CP032515	Escherichia coli strain 118UI chromosome, complete genome	10	5167435-5167599	10	CRISPRCasFinder	no		DEDDh,RT,DinG,cas3,cas14j,c2c9_V-U4,csa3,cas2,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	Orphan	CTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGG	54	0	0	NA	NA	NA	1	1	Orphan	DEDDh,RT,DinG,cas3,cas14j,c2c9_V-U4,csa3,cas2,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	NA,NA	NA|764aa|up_9|CP032515.1_5158062_5160354_-	PRK03776, PRK03776, phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase	NA|165aa|up_8|CP032515.1_5160607_5161102_-	PRK11667, PRK11667, hypothetical protein; Provisional	NA|246aa|up_7|CP032515.1_5161150_5161888_-	PRK07952, PRK07952, DNA replication protein DnaC; Validated	NA|180aa|up_6|CP032515.1_5161890_5162430_-	PRK02854, PRK02854, primosomal protein DnaT	NA|158aa|up_5|CP032515.1_5162536_5163010_-	PRK09917, PRK09917, threonine/serine exporter	NA|257aa|up_4|CP032515.1_5163000_5163771_-	COG2966, COG2966, Uncharacterized conserved protein [Function unknown]	NA|242aa|up_3|CP032515.1_5164389_5165115_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|226aa|up_2|CP032515.1_5165072_5165750_+	PRK11475, PRK11475, DNA-binding transcriptional activator BglJ; Provisional	NA|263aa|up_1|CP032515.1_5165787_5166576_-	PRK10647, PRK10647, ferric iron reductase involved in ferric hydroximate transport; Provisional	NA|92aa|up_0|CP032515.1_5166677_5166953_+	pfam07256, DUF1435, Protein of unknown function (DUF1435)	NA|344aa|down_0|CP032515.1_5167692_5168724_-	PRK09489, rsmC, 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	NA|138aa|down_1|CP032515.1_5168826_5169240_+	PRK06856, PRK06856, DNA polymerase III subunit psi; Validated	NA|149aa|down_2|CP032515.1_5169208_5169655_+	PRK09491, rimI, ribosomal-protein-alanine N-acetyltransferase; Provisional	NA|226aa|down_3|CP032515.1_5169669_5170347_+	PRK09449, PRK09449, dUMP phosphatase; Provisional	NA|530aa|down_4|CP032515.1_5170437_5172027_+	PRK00741, prfC, peptide chain release factor 3; Provisional	NA|202aa|down_5|CP032515.1_5172419_5173025_+	PRK10568, PRK10568, molecular chaperone OsmY	NA|60aa|down_6|CP032515.1_5173133_5173313_+	COG5487, COG5487, Small integral membrane protein [Function unknown]	NA|358aa|down_7|CP032515.1_5173434_5174508_+	COG4667, COG4667, Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]	NA|260aa|down_8|CP032515.1_5174504_5175284_+	PRK11449, PRK11449, metal-dependent hydrolase	NA|288aa|down_9|CP032515.1_5175801_5176665_-	TIGR04041, glycine_radical_enzyme_activase_YjjW_family, glycine radical enzyme activase, YjjW family
