assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003614235.1_ASM361423v1	CP029458	Clostridium novyi strain 150557 chromosome, complete genome	1	703011-703121	1	CRISPRCasFinder	no	cas3	cas14j,DinG,csa3,cas3,cas3HD,cas10,csm3gr7,csx19,cas6,cas8b1,cas7b,cas5,cas4,cas1,cas2,DEDDh,c2c10_CAS-V-U3,cas14k	Unclear	ATAGGACTTGAACCTACGACACTTCGGGT	29	0	0	NA	NA	NA	1	1	Unclear	cas14j,DinG,csa3,cas3,cas3HD,cas10,csm3gr7,csx19,cas6,cas8b1,cas7b,cas5,cas4,cas1,cas2,DEDDh,c2c10_CAS-V-U3,cas14k,cas7	NA,NA	NA|511aa|up_9|CP029458.1_689091_690624_-	PRK00484, lysS, lysyl-tRNA synthetase; Reviewed	NA|160aa|up_8|CP029458.1_690671_691151_-	PRK00226, greA, transcription elongation factor GreA; Reviewed	NA|321aa|up_7|CP029458.1_691427_692390_-	TIGR00737, Probable_tRNA-dihydrouridine_synthase, putative TIM-barrel protein, nifR3 family	NA|260aa|up_6|CP029458.1_692398_693178_-	PRK13318, PRK13318, type III pantothenate kinase	NA|557aa|up_5|CP029458.1_693302_694973_-	pfam01268, FTHFS, Formate--tetrahydrofolate ligase	NA|129aa|up_4|CP029458.1_695068_695455_-	COG5496, COG5496, Predicted thioesterase [General function prediction only]	NA|663aa|up_3|CP029458.1_695594_697583_-	TIGR01241, ATP-dependent_zinc_metalloprotease_FtsH, ATP-dependent metalloprotease FtsH	NA|180aa|up_2|CP029458.1_697646_698186_-	COG0634, Hpt, Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]	NA|468aa|up_1|CP029458.1_698190_699594_-	cd01992, PP-ATPase, N-terminal domain of predicted ATPase of the PP-loop faimly implicated in cell cycle control [Cell division and chromosome partitioning]	NA|798aa|up_0|CP029458.1_699705_702099_-	TIGR02865, Stage_II_sporulation_protein_E, stage II sporulation protein E	NA|137aa|down_0|CP029458.1_703409_703820_-	PRK05807, PRK05807, RNA-binding protein S1	NA|91aa|down_1|CP029458.1_703876_704149_-	pfam04977, DivIC, Septum formation initiator	NA|132aa|down_2|CP029458.1_704228_704624_-	TIGR02893, Spore_protein_YabQ, spore cortex biosynthesis protein YabQ	NA|97aa|down_3|CP029458.1_704630_704921_-	TIGR02892, conserved_hypothetical_protein, sporulation protein YabP	NA|89aa|down_4|CP029458.1_705019_705286_-	COG1188, COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]	NA|93aa|down_5|CP029458.1_705360_705639_-	cd13831, HU, histone-like DNA-binding protein HU	NA|482aa|down_6|CP029458.1_705747_707193_-	COG3956, COG3956, Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain [General function prediction only]	NA|509aa|down_7|CP029458.1_707221_708748_-	cd13124, MATE_SpoVB_like, Stage V sporulation protein B, also known as Stage III sporulation protein F, and related proteins	NA|184aa|down_8|CP029458.1_708843_709395_-	TIGR02851, stage_V_sporulation_protein_T, stage V sporulation protein T	NA|349aa|down_9|CP029458.1_709842_710889_-	PRK00059, prsA, peptidylprolyl isomerase; Provisional
GCA_003614235.1_ASM361423v1	CP029458	Clostridium novyi strain 150557 chromosome, complete genome	2	1398548-1400547	1,2,1,2	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	cas10,csm3gr7,csx19,cas6,cas8b1,cas7b,cas5,cas3,cas4,cas1,cas2	cas14j,DinG,csa3,cas3,cas3HD,cas10,csm3gr7,csx19,cas6,cas8b1,cas7b,cas5,cas4,cas1,cas2,DEDDh,c2c10_CAS-V-U3,cas14k	Type III-B,Type III-C,Type III-D,Type III-A,Type I-B	GTTGAAGTTGAACATTAACATAAGATGTATT,GTTGAACATTAACATAAGATGTATTTAAAT,GTTGAACATTAACATAAGATGTATT,GTTGAACATTAACATAAGATGTATTTAAAT	31,30,25,30	1	1	1398643-1398678	CP029458.1_1237963-1237998	III-B:III-B:III-B:III-B	27,30,30,27	30	TypeIII-B,TypeIII-C,TypeIII-D,TypeIII-A,TypeI-B	cas14j,DinG,csa3,cas3,cas3HD,cas10,csm3gr7,csx19,cas6,cas8b1,cas7b,cas5,cas4,cas1,cas2,DEDDh,c2c10_CAS-V-U3,cas14k,cas7	NA|330aa|up_7|CP029458.1_1386757_1387747_+,csx19|133aa|up_3|CP029458.1_1393404_1393803_+,NA	NA|686aa|up_9|CP029458.1_1383350_1385408_+	PRK09419, PRK09419, multifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase/5'-nucleotidase	NA|394aa|up_8|CP029458.1_1385481_1386663_+	pfam07907, YibE_F, YibE/F-like protein	NA|330aa|up_7|CP029458.1_1386757_1387747_+	NA	cas10|573aa|up_6|CP029458.1_1387932_1389651_+	TIGR02577, thermophile-specific_DNA_repair_system, CRISPR-associated protein Cas10/Cmr2, subtype III-B	csm3gr7|762aa|up_5|CP029458.1_1389699_1391985_+	pfam03787, RAMPs, RAMP superfamily	csm3gr7|472aa|up_4|CP029458.1_1391977_1393393_+	cd09726, RAMP_I_III, CRISPR/Cas system-associated RAMP superfamily protein	csx19|133aa|up_3|CP029458.1_1393404_1393803_+	NA	csm3gr7|722aa|up_2|CP029458.1_1393804_1395970_+	TIGR03986, CRISPR-associated_protein, CRISPR-associated protein	NA|547aa|up_1|CP029458.1_1396005_1397646_+	pfam18145, SAVED, SMODS-associated and fused to various effectors sensor domain	NA|231aa|up_0|CP029458.1_1397672_1398365_+	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	cas6|223aa|down_0|CP029458.1_1401729_1402398_+	cd09652, Cas6-I-III, CRISPR/Cas system-associated RAMP superfamily protein Cas6	cas8b1|511aa|down_1|CP029458.1_1402660_1404193_+	TIGR02591, cas_Csh1, CRISPR-associated protein Cas8b/Csh1, subtype I-B/HMARI	cas7b|333aa|down_2|CP029458.1_1404195_1405194_+	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas5|254aa|down_3|CP029458.1_1405196_1405958_+	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI	cas3|878aa|down_4|CP029458.1_1406025_1408659_+	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3	cas4|165aa|down_5|CP029458.1_1408667_1409162_+	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas1|333aa|down_6|CP029458.1_1409173_1410172_+	cd09722, Cas1_I-B, CRISPR/Cas system-associated protein Cas1	cas2|96aa|down_7|CP029458.1_1410171_1410459_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|255aa|down_8|CP029458.1_1413166_1413931_-	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]	NA|385aa|down_9|CP029458.1_1414254_1415409_+	cd08194, Fe-ADH-like, Iron-containing alcohol dehydrogenases-like
GCA_003614235.1_ASM361423v1	CP029458	Clostridium novyi strain 150557 chromosome, complete genome	3	1410643-1413099	3,3,2	PILER-CR,CRISPRCasFinder,CRT	no	csm3gr7,csx19,cas6,cas8b1,cas7b,cas5,cas3,cas4,cas1,cas2	cas14j,DinG,csa3,cas3,cas3HD,cas10,csm3gr7,csx19,cas6,cas8b1,cas7b,cas5,cas4,cas1,cas2,DEDDh,c2c10_CAS-V-U3,cas14k	Type I-B	GTTGAACATTAACATAAGATGTATTTAAAT,GTTGAACATTAACATAAGATGTATTTAAAT,GTTGAACATTAACATAAGATGTATTTAAAT	30,30,30	0	0	NA	NA	III-B:III-B:III-B	36,37,37	37	TypeI-B	cas14j,DinG,csa3,cas3,cas3HD,cas10,csm3gr7,csx19,cas6,cas8b1,cas7b,cas5,cas4,cas1,cas2,DEDDh,c2c10_CAS-V-U3,cas14k,cas7	NA,NA	NA|547aa|up_9|CP029458.1_1396005_1397646_+	pfam18145, SAVED, SMODS-associated and fused to various effectors sensor domain	NA|231aa|up_8|CP029458.1_1397672_1398365_+	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	cas6|223aa|up_7|CP029458.1_1401729_1402398_+	cd09652, Cas6-I-III, CRISPR/Cas system-associated RAMP superfamily protein Cas6	cas8b1|511aa|up_6|CP029458.1_1402660_1404193_+	TIGR02591, cas_Csh1, CRISPR-associated protein Cas8b/Csh1, subtype I-B/HMARI	cas7b|333aa|up_5|CP029458.1_1404195_1405194_+	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas5|254aa|up_4|CP029458.1_1405196_1405958_+	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI	cas3|878aa|up_3|CP029458.1_1406025_1408659_+	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3	cas4|165aa|up_2|CP029458.1_1408667_1409162_+	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas1|333aa|up_1|CP029458.1_1409173_1410172_+	cd09722, Cas1_I-B, CRISPR/Cas system-associated protein Cas1	cas2|96aa|up_0|CP029458.1_1410171_1410459_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|255aa|down_0|CP029458.1_1413166_1413931_-	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]	NA|385aa|down_1|CP029458.1_1414254_1415409_+	cd08194, Fe-ADH-like, Iron-containing alcohol dehydrogenases-like	NA|282aa|down_2|CP029458.1_1415451_1416297_+	PRK06806, PRK06806, class II aldolase	NA|339aa|down_3|CP029458.1_1416319_1417336_+	TIGR04382, myo-inositol_catabolism_protein, 5-dehydro-2-deoxygluconokinase	NA|263aa|down_4|CP029458.1_1417388_1418177_+	pfam04962, KduI, KduI/IolB family	NA|646aa|down_5|CP029458.1_1418199_1420137_+	TIGR04377, 3D-35/4-trihydroxycyclohexane-12-dione_hydrolase, 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase	NA|338aa|down_6|CP029458.1_1420191_1421205_+	TIGR04380, hypothetical_protein_HOLDEFILI_04020, inositol 2-dehydrogenase	NA|299aa|down_7|CP029458.1_1421278_1422175_+	TIGR04379, myo-inositol_catabolism_protein, myo-inosose-2 dehydratase	NA|342aa|down_8|CP029458.1_1422262_1423288_+	TIGR04380, hypothetical_protein_HOLDEFILI_04020, inositol 2-dehydrogenase	NA|533aa|down_9|CP029458.1_1423626_1425225_+	PRK10484, PRK10484, putative transporter; Provisional
GCA_003614235.1_ASM361423v1	CP029458	Clostridium novyi strain 150557 chromosome, complete genome	4	1563634-1564464	4,4,3	PILER-CR,CRISPRCasFinder,CRT	no	c2c10_CAS-V-U3	cas14j,DinG,csa3,cas3,cas3HD,cas10,csm3gr7,csx19,cas6,cas8b1,cas7b,cas5,cas4,cas1,cas2,DEDDh,c2c10_CAS-V-U3,cas14k	Type V-U3	GTTTTAGTTTAACTATGTGAAATGTAAAT,GTTTTAGTTTAACTATGTGAAATGTAAAT,GTTTTAGTTTAACTATGTGAAATGTAAAT	29,29,29	0	0	NA	NA	NA:NA:NA	10,11,12	12	TypeV-U3	cas14j,DinG,csa3,cas3,cas3HD,cas10,csm3gr7,csx19,cas6,cas8b1,cas7b,cas5,cas4,cas1,cas2,DEDDh,c2c10_CAS-V-U3,cas14k,cas7	NA|65aa|up_5|CP029458.1_1557152_1557347_+,NA|270aa|up_2|CP029458.1_1559615_1560425_-,NA|248aa|up_1|CP029458.1_1560433_1561177_-,NA|89aa|down_0|CP029458.1_1564473_1564740_+,NA|200aa|down_6|CP029458.1_1577079_1577679_+,NA|306aa|down_9|CP029458.1_1579941_1580859_-	NA|73aa|up_9|CP029458.1_1554918_1555137_-	pfam11148, DUF2922, Protein of unknown function (DUF2922)	NA|72aa|up_8|CP029458.1_1555150_1555366_-	pfam07872, DUF1659, Protein of unknown function (DUF1659)	NA|76aa|up_7|CP029458.1_1555438_1555666_-	pfam10960, Holin_BhlA, BhlA holin family	NA|180aa|up_6|CP029458.1_1556292_1556832_+	PRK08295, PRK08295, RNA polymerase sporulation sigma factor SigH	NA|65aa|up_5|CP029458.1_1557152_1557347_+	NA	NA|391aa|up_4|CP029458.1_1557432_1558605_+	COG0270, Dcm, Site-specific DNA methylase [DNA replication, recombination, and repair]	NA|329aa|up_3|CP029458.1_1558616_1559603_+	pfam00145, DNA_methylase, C-5 cytosine-specific DNA methylase	NA|270aa|up_2|CP029458.1_1559615_1560425_-	NA	NA|248aa|up_1|CP029458.1_1560433_1561177_-	NA	c2c10_CAS-V-U3|498aa|up_0|CP029458.1_1561808_1563302_+	pfam07282, OrfB_Zn_ribbon, Putative transposase DNA-binding domain	NA|89aa|down_0|CP029458.1_1564473_1564740_+	NA	NA|74aa|down_1|CP029458.1_1565702_1565924_+	COG4443, COG4443, Uncharacterized protein conserved in bacteria [Function unknown]	NA|665aa|down_2|CP029458.1_1567721_1569716_+	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer)	NA|511aa|down_3|CP029458.1_1570156_1571689_+	cd08978, GH_F, Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F	NA|1184aa|down_4|CP029458.1_1571810_1575362_-	cd07475, Peptidases_S8_C5a_Peptidase, Peptidase S8 family domain in Streptococcal C5a peptidases	NA|409aa|down_5|CP029458.1_1575589_1576816_-	COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism]	NA|200aa|down_6|CP029458.1_1577079_1577679_+	NA	NA|327aa|down_7|CP029458.1_1577746_1578727_-	pfam13365, Trypsin_2, Trypsin-like peptidase domain	NA|315aa|down_8|CP029458.1_1578851_1579796_-	pfam00089, Trypsin, Trypsin	NA|306aa|down_9|CP029458.1_1579941_1580859_-	NA
GCA_003614235.1_ASM361423v1	CP029460	Clostridium novyi strain 150557 plasmid pCN2, complete sequence	1	36952-37198	1	CRISPRCasFinder	no	cas7,cas6	cas7,cas6	Unclear	TAACTAAAATAGTTTTATTAATA	23	0	0	NA	NA	NA	4	4	Unclear	cas14j,DinG,csa3,cas3,cas3HD,cas10,csm3gr7,csx19,cas6,cas8b1,cas7b,cas5,cas4,cas1,cas2,DEDDh,c2c10_CAS-V-U3,cas14k,cas7	NA|90aa|up_7|CP029460.1_28290_28560_+,NA|142aa|up_5|CP029460.1_30623_31049_+,NA|304aa|up_4|CP029460.1_31150_32062_-,NA|88aa|down_0|CP029460.1_38242_38506_-,NA|556aa|down_5|CP029460.1_44531_46199_-,NA|315aa|down_6|CP029460.1_47047_47992_+,NA|315aa|down_7|CP029460.1_48130_49075_+,NA|311aa|down_8|CP029460.1_49186_50119_+,NA|316aa|down_9|CP029460.1_50241_51189_+	NA|529aa|up_9|CP029460.1_24875_26462_+	TIGR02806, Contains:_Clostripain_light_chain, clostripain	NA|333aa|up_8|CP029460.1_26857_27856_+	cd08586, PI-PLCc_BcPLC_like, Catalytic domain of Bacillus cereus phosphatidylinositol-specific phospholipases C and similar proteins	NA|90aa|up_7|CP029460.1_28290_28560_+	NA	NA|435aa|up_6|CP029460.1_28625_29930_-	smart00999, Aerolysin, Aerolysin toxin	NA|142aa|up_5|CP029460.1_30623_31049_+	NA	NA|304aa|up_4|CP029460.1_31150_32062_-	NA	NA|138aa|up_3|CP029460.1_32276_32690_-	cd04086, CBM35_mannanase-like, Carbohydrate Binding Module 35 (CBM35); appended to several carbohydrate binding enzymes, including several glycoside hydrolase (GH) family 26 mannanase domains	NA|262aa|up_2|CP029460.1_32717_33503_-	cd04086, CBM35_mannanase-like, Carbohydrate Binding Module 35 (CBM35); appended to several carbohydrate binding enzymes, including several glycoside hydrolase (GH) family 26 mannanase domains	NA|417aa|up_1|CP029460.1_33698_34949_-	cd04081, CBM35_galactosidase-like, Carbohydrate Binding Module family 35 (CBM35); appended mainly to enzymes that bind alpha-D-galactose (CBM35-Gal), including glycoside hydrolase (GH) families GH27 and GH43	NA|368aa|up_0|CP029460.1_35146_36250_-	pfam13620, CarboxypepD_reg, Carboxypeptidase regulatory-like domain	NA|88aa|down_0|CP029460.1_38242_38506_-	NA	cas6|252aa|down_1|CP029460.1_39461_40217_-	COG1583, COG1583, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	NA|215aa|down_2|CP029460.1_40195_40840_-	TIGR01895, conserved_hypothetical_protein, CRISPR-associated protein Cas5, subtype I-B/TNEAP	NA|689aa|down_3|CP029460.1_41253_43320_-	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|319aa|down_4|CP029460.1_43352_44309_-	cd01846, fatty_acyltransferase_like, Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases	NA|556aa|down_5|CP029460.1_44531_46199_-	NA	NA|315aa|down_6|CP029460.1_47047_47992_+	NA	NA|315aa|down_7|CP029460.1_48130_49075_+	NA	NA|311aa|down_8|CP029460.1_49186_50119_+	NA	NA|316aa|down_9|CP029460.1_50241_51189_+	NA
