assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003612915.1_ASM361291v1	CP031078	Paracoccus yeei strain CCUG 32053 chromosome, complete genome	1	343814-344333	1	CRT	no		PD-DExK,csa3,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,cas3HD,DEDDh	Orphan	CCCAGGGAGGAGGAGGGG	18	0	0	NA	NA	NA	11	11	Orphan	PD-DExK,csa3,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,cas3HD,DEDDh	NA|102aa|up_9|CP031078.1_336737_337043_+,NA|52aa|up_7|CP031078.1_338029_338185_+,NA|183aa|up_2|CP031078.1_341783_342332_+,NA	NA|102aa|up_9|CP031078.1_336737_337043_+	NA	NA|261aa|up_8|CP031078.1_337114_337897_+	PRK05950, sdhB, succinate dehydrogenase iron-sulfur subunit; Reviewed	NA|52aa|up_7|CP031078.1_338029_338185_+	NA	NA|278aa|up_6|CP031078.1_338344_339178_+	COG3665, COG3665, Uncharacterized conserved protein [Function unknown]	NA|231aa|up_5|CP031078.1_339174_339867_-	PRK00685, PRK00685, metal-dependent hydrolase; Provisional	NA|96aa|up_4|CP031078.1_339992_340280_+	PRK00034, gatC, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	NA|495aa|up_3|CP031078.1_340276_341761_+	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	NA|183aa|up_2|CP031078.1_341783_342332_+	NA	NA|223aa|up_1|CP031078.1_342342_343011_+	COG3023, ampD, N-acetyl-anhydromuramyl-L-alanine amidase [Cell envelope biogenesis, outer membrane]	NA|259aa|up_0|CP031078.1_342956_343733_-	COG2961, ComJ, Protein involved in catabolism of external DNA [General function prediction only]	NA|75aa|down_0|CP031078.1_344351_344576_-	pfam06568, DUF1127, Domain of unknown function (DUF1127)	NA|368aa|down_1|CP031078.1_344893_345997_+	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase	NA|169aa|down_2|CP031078.1_346646_347153_+	PRK00326, PRK00326, transcriptional regulator MraZ	NA|324aa|down_3|CP031078.1_347153_348125_+	PRK00050, PRK00050, 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	NA|128aa|down_4|CP031078.1_348124_348508_+	COG5462, COG5462, Predicted secreted (periplasmic) protein [Function unknown]	NA|602aa|down_5|CP031078.1_348504_350310_+	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane]	NA|490aa|down_6|CP031078.1_350339_351809_+	PRK00139, murE, UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase; Provisional	NA|462aa|down_7|CP031078.1_351805_353191_+	PRK14093, PRK14093, UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase; Provisional	NA|361aa|down_8|CP031078.1_353190_354273_+	PRK00108, mraY, phospho-N-acetylmuramoyl-pentapeptide-transferase; Provisional	NA|467aa|down_9|CP031078.1_354351_355752_+	PRK01390, murD, UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
GCA_003612915.1_ASM361291v1	CP031078	Paracoccus yeei strain CCUG 32053 chromosome, complete genome	2	1251854-1252186	1,1,2	PILER-CR,CRISPRCasFinder,CRT	no		PD-DExK,csa3,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,cas3HD,DEDDh	Orphan	CTGTTCCCCGCATGCGCGGGGATGAACCG,CTGTTCCCCGCATGCGCGGGGATGA,CTGTTCCCCGCATGCGCGGGGATGAACCG	29,25,29	1	1	1251944-1251975	CP031078.1_728362-728393	I-E:I-E:I-E	5,5,5	5	Orphan	PD-DExK,csa3,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,cas3HD,DEDDh	NA|197aa|up_8|CP031078.1_1234513_1235104_+,NA|241aa|up_5|CP031078.1_1239088_1239811_+,NA|103aa|up_0|CP031078.1_1250034_1250343_+,NA|319aa|down_3|CP031078.1_1254263_1255220_-,NA|641aa|down_6|CP031078.1_1257885_1259808_-,NA|111aa|down_7|CP031078.1_1259804_1260137_-,NA|208aa|down_8|CP031078.1_1260142_1260766_-,NA|81aa|down_9|CP031078.1_1261745_1261988_-	NA|85aa|up_9|CP031078.1_1233944_1234199_-	pfam12728, HTH_17, Helix-turn-helix domain	NA|197aa|up_8|CP031078.1_1234513_1235104_+	NA	NA|410aa|up_7|CP031078.1_1235246_1236476_+	cd00796, INT_Rci_Hp1_C, Shufflon-specific DNA recombinase Rci and Bacteriophage Hp1_like integrase, C-terminal catalytic domain	NA|819aa|up_6|CP031078.1_1236635_1239092_+	COG4096, HsdR, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms]	NA|241aa|up_5|CP031078.1_1239088_1239811_+	NA	NA|483aa|up_4|CP031078.1_1239821_1241270_+	COG0286, HsdM, Type I restriction-modification system methyltransferase subunit [Defense mechanisms]	NA|405aa|up_3|CP031078.1_1242149_1243364_+	pfam00872, Transposase_mut, Transposase, Mutator family	NA|377aa|up_2|CP031078.1_1245708_1246839_-	COG3547, COG3547, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|311aa|up_1|CP031078.1_1248711_1249644_+	pfam13737, DDE_Tnp_1_5, Transposase DDE domain	NA|103aa|up_0|CP031078.1_1250034_1250343_+	NA	NA|101aa|down_0|CP031078.1_1252487_1252790_-	COG2361, COG2361, Uncharacterized conserved protein [Function unknown]	NA|100aa|down_1|CP031078.1_1252825_1253125_-	COG1669, COG1669, Predicted nucleotidyltransferases [General function prediction only]	NA|211aa|down_2|CP031078.1_1253378_1254011_+	cd01188, INT_RitA_C_like, C-terminal catalytic domain of recombinase RitA, a component of the recombinase trio	NA|319aa|down_3|CP031078.1_1254263_1255220_-	NA	NA|198aa|down_4|CP031078.1_1255219_1255813_-	cd16413, DGQHR_domain, DGQHR motif containing domain	NA|198aa|down_5|CP031078.1_1256571_1257165_+	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|641aa|down_6|CP031078.1_1257885_1259808_-	NA	NA|111aa|down_7|CP031078.1_1259804_1260137_-	NA	NA|208aa|down_8|CP031078.1_1260142_1260766_-	NA	NA|81aa|down_9|CP031078.1_1261745_1261988_-	NA
GCA_003612915.1_ASM361291v1	CP031078	Paracoccus yeei strain CCUG 32053 chromosome, complete genome	3	2181604-2184133	2,3,2	CRISPRCasFinder,CRT,PILER-CR	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	PD-DExK,csa3,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,cas3HD,DEDDh	Type I-E	GGCTCCCCCGCACCCGCGGGGATAGACCC,GGCTCCCCCGCACCCGCGGGGATAGACCC,GGCTCCCCCGCACCCGCGGGGATAGACCC	29,29,29	0	0	NA	NA	NA:NA:NA	41,41,29	41	TypeI-E	PD-DExK,csa3,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,cas3HD,DEDDh	NA|41aa|up_8|CP031078.1_2173017_2173140_-,NA|155aa|down_1|CP031078.1_2185259_2185724_-	NA|169aa|up_9|CP031078.1_2172216_2172723_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|41aa|up_8|CP031078.1_2173017_2173140_-	NA	cas3|822aa|up_7|CP031078.1_2173143_2175609_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|513aa|up_6|CP031078.1_2175687_2177226_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|194aa|up_5|CP031078.1_2177209_2177791_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|380aa|up_4|CP031078.1_2177787_2178927_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|225aa|up_3|CP031078.1_2178926_2179601_+	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas6e|256aa|up_2|CP031078.1_2179597_2180365_+	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions	cas1|291aa|up_1|CP031078.1_2180365_2181238_+	cd09719, Cas1_I-E, CRISPR/Cas system-associated protein Cas1	cas2|100aa|up_0|CP031078.1_2181239_2181539_+	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	NA|194aa|down_0|CP031078.1_2184528_2185110_-	TIGR01848, Uncharacterized_protein_Alvin_0064, polyhydroxyalkanoate synthesis repressor PhaR	NA|155aa|down_1|CP031078.1_2185259_2185724_-	NA	NA|773aa|down_2|CP031078.1_2185844_2188163_-	TIGR01838, Poly-beta-hydroxybutyrate_polymerase, poly(R)-hydroxyalkanoic acid synthase, class I	NA|449aa|down_3|CP031078.1_2188265_2189612_+	TIGR01849, unnamed_protein_product, polyhydroxyalkanoate depolymerase, intracellular	NA|247aa|down_4|CP031078.1_2189636_2190377_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|649aa|down_5|CP031078.1_2190542_2192489_+	PRK00413, thrS, threonyl-tRNA synthetase; Reviewed	NA|69aa|down_6|CP031078.1_2192723_2192930_+	COG1278, CspC, Cold shock proteins [Transcription]	NA|484aa|down_7|CP031078.1_2193087_2194539_+	COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]	NA|217aa|down_8|CP031078.1_2194540_2195191_+	cd03024, DsbA_FrnE, DsbA family, FrnE subfamily; FrnE is a DsbA-like protein containing a CXXC motif	NA|401aa|down_9|CP031078.1_2195234_2196437_-	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase
