The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP025288	Ethanoligenens harbinense strain X-29 chromosome, complete genome	3100123	85219	106563	3100123	terminase,capsid,tail,transposase	Faecalibacterium_phage(53.85%)	29	NA	NA
AYF40252.1|85219_87172_+|transposase	transposase	transposase	A0A0N7ACC7	Bacillus_phage	36.7	9.6e-106
AYF40253.1|87187_88138_+	ATP-binding protein	NA	A0A0N7ACA6	Bacillus_phage	33.9	2.0e-40
AYF40254.1|88154_88340_+	hypothetical protein	NA	NA	NA	NA	NA
AYF40255.1|88346_88823_+	hypothetical protein	NA	NA	NA	NA	NA
AYF40256.1|88815_89124_+	hypothetical protein	NA	NA	NA	NA	NA
AYF40257.1|89225_89666_+	hypothetical protein	NA	NA	NA	NA	NA
AYF40258.1|89667_89940_+	AbrB family transcriptional regulator	NA	NA	NA	NA	NA
AYF40259.1|89926_90592_+	hypothetical protein	NA	NA	NA	NA	NA
AYF40260.1|90622_91123_+	regulatory protein GemA	NA	NA	NA	NA	NA
AYF40261.1|91119_91443_+	DNA-binding protein	NA	A0A2K9VGU3	Faecalibacterium_phage	39.1	4.7e-10
AYF40262.1|91613_91952_+	hypothetical protein	NA	NA	NA	NA	NA
AYF40263.1|91944_92271_+	hypothetical protein	NA	NA	NA	NA	NA
AYF40264.1|92292_92865_+	DUF3486 domain-containing protein	NA	NA	NA	NA	NA
AYF40265.1|92861_93356_+	antitermination protein NusG	NA	NA	NA	NA	NA
AYF40266.1|93587_95039_+|terminase	terminase	terminase	A0A090EUA8	Clostridium_phage	61.2	4.1e-162
AYF42785.1|95056_96484_+|capsid	capsid protein	capsid	A0A2K9V3H9	Faecalibacterium_phage	52.0	2.1e-134
AYF40267.1|96470_98138_+|capsid	capsid protein	capsid	A0A2K9V3K1	Faecalibacterium_phage	39.5	6.8e-68
AYF40268.1|98150_98372_+	hypothetical protein	NA	NA	NA	NA	NA
AYF40269.1|98536_99076_+	hypothetical protein	NA	A0A2K9V3G1	Faecalibacterium_phage	46.1	6.6e-33
AYF40270.1|99088_100264_+|capsid	phage major capsid protein	capsid	A0A2K9V3F8	Faecalibacterium_phage	62.5	1.5e-106
AYF40271.1|100277_100649_+	hypothetical protein	NA	NA	NA	NA	NA
AYF40272.1|100645_101068_+	hypothetical protein	NA	NA	NA	NA	NA
AYF40273.1|101072_101486_+	hypothetical protein	NA	NA	NA	NA	NA
AYF40274.1|101485_101911_+	hypothetical protein	NA	A0A1J1J8Y6	Escherichia_phage	41.3	1.3e-28
AYF40275.1|101907_102411_+	hypothetical protein	NA	A0A2K9V3I7	Faecalibacterium_phage	42.0	4.8e-25
AYF40276.1|102423_102780_+	hypothetical protein	NA	F6K8R7	Clostridium_phage	37.4	4.0e-10
AYF40277.1|102776_103376_+	hypothetical protein	NA	B3GW12	Streptococcus_phage	44.6	9.1e-07
AYF40278.1|103341_106005_+	hypothetical protein	NA	A0A2K9V3J7	Faecalibacterium_phage	40.0	3.4e-37
AYF40279.1|106017_106563_+|tail	phage tail protein	tail	NA	NA	NA	NA
>prophage 2
CP025288	Ethanoligenens harbinense strain X-29 chromosome, complete genome	3100123	194797	204917	3100123	tRNA	Klosneuvirus(14.29%)	9	NA	NA
AYF40354.1|194797_196735_-|tRNA	threonine--tRNA ligase	tRNA	A0A1V0SKZ9	Klosneuvirus	32.2	4.0e-64
AYF40355.1|197359_197794_+	NfeD family protein	NA	NA	NA	NA	NA
AYF40356.1|197833_198796_+	SPFH/Band 7/PHB domain protein	NA	A0A0G2YDT0	Acanthamoeba_polyphaga_mimivirus	29.4	3.2e-14
AYF42793.1|199261_199759_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	42.1	1.2e-20
AYF40357.1|199755_200472_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0E3FUQ7	Synechococcus_phage	43.3	1.2e-45
AYF40358.1|200584_202081_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	35.0	2.0e-55
AYF40359.1|202081_203116_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	45.4	1.4e-66
AYF40360.1|203109_203751_+	phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA	NA
AYF40361.1|203747_204917_+	phosphoribosylpyrophosphate synthetase	NA	A0A0K1YAT7	Cronobacter_phage	21.8	2.3e-06
>prophage 3
CP025288	Ethanoligenens harbinense strain X-29 chromosome, complete genome	3100123	508928	534860	3100123	tail,capsid,integrase	Faecalibacterium_phage(45.45%)	26	508215:508231	510447:510463
508215:508231	attL	GATAAATCATCATTTAG	NA	NA	NA	NA
AYF40615.1|508928_509921_+|integrase	integrase	integrase	A0A2H4JAA2	uncultured_Caudovirales_phage	30.1	2.1e-40
AYF40616.1|509934_510471_+	restriction endonuclease subunit S	NA	NA	NA	NA	NA
510447:510463	attR	GATAAATCATCATTTAG	NA	NA	NA	NA
AYF40617.1|510459_511104_-	hypothetical protein	NA	NA	NA	NA	NA
AYF40618.1|514236_514908_+	restriction endonuclease	NA	NA	NA	NA	NA
AYF40619.1|515025_515592_-	recombinase	NA	A0A286S1P7	Klebsiella_phage	40.6	2.7e-29
AYF40620.1|515885_516668_-	peptidase	NA	K7YGS3	Megavirus	35.0	1.7e-29
AYF40621.1|516670_516925_-	hypothetical protein	NA	NA	NA	NA	NA
AYF40622.1|518187_518916_-	hypothetical protein	NA	NA	NA	NA	NA
AYF40623.1|518929_519985_-	hypothetical protein	NA	NA	NA	NA	NA
AYF40624.1|519984_521262_-|tail	phage tail protein	tail	NA	NA	NA	NA
AYF40625.1|521261_522167_-	hypothetical protein	NA	NA	NA	NA	NA
AYF40626.1|522166_522712_-|tail	phage tail protein	tail	NA	NA	NA	NA
AYF40627.1|522724_525904_-	hypothetical protein	NA	A0A2H4JA91	uncultured_Caudovirales_phage	25.0	2.4e-13
AYF42818.1|526123_526513_+	hypothetical protein	NA	NA	NA	NA	NA
AYF40628.1|526509_527118_-	hypothetical protein	NA	B3GW12	Streptococcus_phage	33.3	9.8e-09
AYF40629.1|527114_527498_-	hypothetical protein	NA	NA	NA	NA	NA
AYF40630.1|527511_528015_-	hypothetical protein	NA	A0A2K9V3I7	Faecalibacterium_phage	42.8	3.6e-25
AYF40631.1|528017_528437_-	hypothetical protein	NA	A0A1J1J8Y6	Escherichia_phage	39.0	5.5e-27
AYF40632.1|528436_528847_-	hypothetical protein	NA	NA	NA	NA	NA
AYF40633.1|528851_529274_-	hypothetical protein	NA	NA	NA	NA	NA
AYF40634.1|529270_529639_-	hypothetical protein	NA	NA	NA	NA	NA
AYF40635.1|529651_530827_-|capsid	phage major capsid protein	capsid	A0A2K9V3F8	Faecalibacterium_phage	62.5	4.4e-106
AYF40636.1|530839_531379_-	hypothetical protein	NA	A0A2K9V3G1	Faecalibacterium_phage	46.6	3.5e-34
AYF40637.1|531541_531763_-	hypothetical protein	NA	NA	NA	NA	NA
AYF40638.1|531765_533436_-|capsid	capsid protein	capsid	A0A2K9V3K1	Faecalibacterium_phage	39.3	4.9e-66
AYF40639.1|533435_534860_-|capsid	capsid protein	capsid	A0A2K9V3H9	Faecalibacterium_phage	53.7	2.6e-137
>prophage 4
CP025288	Ethanoligenens harbinense strain X-29 chromosome, complete genome	3100123	1353686	1365733	3100123	transposase	Streptococcus_phage(36.36%)	15	NA	NA
AYF41298.1|1353686_1355219_-|transposase	IS66 family transposase	transposase	S5VTD3	Leptospira_phage	36.4	3.0e-70
AYF41299.1|1355284_1355635_-	IS66 family insertion sequence hypothetical protein	NA	S5VXZ8	Leptospira_phage	50.6	1.1e-17
AYF41300.1|1355634_1355994_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA	NA
AYF41301.1|1356313_1357111_-	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	47.1	2.2e-53
AYF41302.1|1357107_1358055_-|transposase	transposase	transposase	A0A059NT83	Lactococcus_phage	33.9	6.0e-37
AYF41303.1|1358141_1358327_-	hypothetical protein	NA	NA	NA	NA	NA
AYF41304.1|1358368_1358803_+	hypothetical protein	NA	NA	NA	NA	NA
AYF41305.1|1358849_1359275_-	very short patch repair endonuclease	NA	E5E3X5	Burkholderia_phage	55.0	3.2e-30
AYF42877.1|1359274_1360528_-	LlaJI family restriction endonuclease	NA	Q6DMW8	Streptococcus_phage	38.7	8.9e-81
AYF41306.1|1360560_1362288_-	hypothetical protein	NA	Q6DMW9	Streptococcus_phage	45.1	1.9e-81
AYF41307.1|1362311_1363352_-	DNA (cytosine-5-)-methyltransferase	NA	Q02778	Bacillus_phage	39.0	2.0e-25
AYF41308.1|1363348_1364665_-	DNA (cytosine-5-)-methyltransferase	NA	M1PSQ0	Streptococcus_phage	32.3	1.4e-39
AYF41309.1|1364687_1364879_-	DNA-binding protein	NA	A0A1B1IUF9	uncultured_Mediterranean_phage	50.0	9.5e-11
AYF41310.1|1364893_1365145_-	hypothetical protein	NA	NA	NA	NA	NA
AYF41311.1|1365274_1365733_+|transposase	IS200/IS605 family transposase ISEha1	transposase	A0A286QN76	Streptococcus_phage	33.1	1.8e-15
>prophage 5
CP025288	Ethanoligenens harbinense strain X-29 chromosome, complete genome	3100123	1869025	1875976	3100123		Clostridium_phage(33.33%)	8	NA	NA
AYF41737.1|1869025_1869784_-	3-ketoacyl-ACP reductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	29.1	7.2e-17
AYF41738.1|1870025_1870976_+	glycosyltransferase	NA	I1TED8	Salmonella_phage	37.5	1.3e-47
AYF41739.1|1871371_1872460_-	glycerol dehydrogenase	NA	NA	NA	NA	NA
AYF41740.1|1872640_1873495_-	YitT family protein	NA	M1Q1P6	Streptococcus_phage	31.2	2.5e-34
AYF41741.1|1873939_1875247_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	32.6	5.2e-55
AYF41742.1|1875243_1875504_+	hypothetical protein	NA	NA	NA	NA	NA
AYF41743.1|1875562_1875736_-	Arc family DNA-binding protein	NA	A0A0A8WG21	Clostridium_phage	54.7	2.1e-09
AYF41744.1|1875802_1875976_-	Arc family DNA-binding protein	NA	A0A0A8WG21	Clostridium_phage	58.2	9.6e-10
>prophage 6
CP025288	Ethanoligenens harbinense strain X-29 chromosome, complete genome	3100123	2041304	2072171	3100123	capsid,tail,head,protease,portal,terminase	Erysipelothrix_phage(42.31%)	37	NA	NA
AYF41883.1|2041304_2043311_-	SAM-dependent DNA methyltransferase	NA	A0A220A2U5	Liberibacter_phage	29.0	2.2e-20
AYF42942.1|2043401_2043587_-	helix-turn-helix domain-containing protein	NA	A0A1B1IUF9	uncultured_Mediterranean_phage	46.9	1.0e-09
AYF41884.1|2043609_2044467_-	hypothetical protein	NA	NA	NA	NA	NA
AYF41885.1|2044706_2044898_+	hypothetical protein	NA	NA	NA	NA	NA
AYF41886.1|2045190_2045691_+	bacterio-opsin activator	NA	NA	NA	NA	NA
AYF41887.1|2045973_2046306_+	DNA ligase	NA	A0A2K5B2A7	Erysipelothrix_phage	36.4	3.5e-08
AYF41888.1|2046295_2047438_+	DUF2800 domain-containing protein	NA	A0A1X9I6D8	Streptococcus_phage	58.8	1.7e-126
AYF41889.1|2047430_2048009_+	DUF2815 domain-containing protein	NA	M1PLM6	Streptococcus_phage	74.2	1.0e-71
AYF41890.1|2048021_2048219_+	hypothetical protein	NA	NA	NA	NA	NA
AYF42943.1|2048297_2050286_+	DNA polymerase I	NA	A0A2K5B2B0	Erysipelothrix_phage	64.0	2.3e-256
AYF41891.1|2050382_2050805_+	hypothetical protein	NA	A0A2K5B270	Erysipelothrix_phage	51.9	1.3e-36
AYF41892.1|2050747_2053057_+	DNA primase	NA	A0A1X9I6B6	Streptococcus_phage	37.8	5.4e-47
AYF41893.1|2053301_2053859_+	hypothetical protein	NA	NA	NA	NA	NA
AYF41894.1|2053855_2054143_+	VRR-NUC domain-containing protein	NA	M1PFY8	Streptococcus_phage	60.7	7.1e-26
AYF41895.1|2054120_2054633_+	HNH endonuclease	NA	A0A2I7QIM4	Bacillus_phage	39.0	1.3e-22
AYF41896.1|2054616_2055969_+	ATP-dependent helicase	NA	A0A2K5B273	Erysipelothrix_phage	66.6	2.2e-154
AYF41897.1|2055965_2056187_+	hypothetical protein	NA	A0A2K5B274	Erysipelothrix_phage	59.2	3.9e-16
AYF41898.1|2056183_2056597_+	DUF1492 domain-containing protein	NA	NA	NA	NA	NA
AYF41899.1|2056751_2057105_+	HNH endonuclease	NA	A0A2K5B276	Erysipelothrix_phage	59.8	1.9e-36
AYF41900.1|2057241_2057793_+|terminase	terminase	terminase	A0A2K5B277	Erysipelothrix_phage	62.3	1.4e-57
AYF41901.1|2057793_2059056_+	DNA methylase	NA	A0A1B0RXJ0	Streptococcus_phage	41.9	6.9e-97
AYF42944.1|2059823_2060555_+	virulence protein	NA	A0A2K5B280	Erysipelothrix_phage	43.6	3.8e-47
AYF41902.1|2060551_2060776_+	DUF4314 domain-containing protein	NA	A0A2K5B281	Erysipelothrix_phage	64.2	5.0e-19
AYF41903.1|2060777_2060963_+	DUF5049 domain-containing protein	NA	NA	NA	NA	NA
AYF41904.1|2061083_2061560_+	hypothetical protein	NA	NA	NA	NA	NA
AYF41905.1|2061562_2061790_+	hypothetical protein	NA	NA	NA	NA	NA
AYF41906.1|2061909_2063517_+|terminase	terminase large subunit	terminase	A0A2K5B285	Erysipelothrix_phage	81.9	2.9e-265
AYF41907.1|2063595_2064942_+|portal	phage portal protein	portal	A0A2K5B287	Erysipelothrix_phage	76.0	1.1e-185
AYF41908.1|2064938_2065685_+|protease	Clp protease ClpP	protease	Q6DMU1	Streptococcus_phage	60.2	1.2e-69
AYF41909.1|2065704_2066910_+|capsid	phage major capsid protein	capsid	Q6DMU0	Streptococcus_phage	62.3	1.1e-144
AYF41910.1|2066978_2067257_+|head,tail	phage gp6-like head-tail connector protein	head,tail	M1PSE8	Streptococcus_phage	43.5	3.7e-11
AYF41911.1|2067256_2067589_+|head,tail	head-tail adaptor protein	head,tail	NA	NA	NA	NA
AYF41912.1|2067585_2067966_+	hypothetical protein	NA	Q9AZY1	Lactococcus_phage	33.1	5.9e-12
AYF41913.1|2067962_2068289_+	hypothetical protein	NA	D2XR22	Bacillus_phage	47.7	1.2e-21
AYF41914.1|2068294_2068891_+|tail	phage tail protein	tail	A0A0U4JWV5	Exiguobacterium_phage	50.5	5.8e-46
AYF41915.1|2068902_2069280_+	hypothetical protein	NA	NA	NA	NA	NA
AYF41916.1|2069456_2072171_+|tail	phage tail tape measure protein	tail	Q6DMT2	Streptococcus_phage	30.2	5.0e-44
>prophage 7
CP025288	Ethanoligenens harbinense strain X-29 chromosome, complete genome	3100123	2075463	2084287	3100123	holin	Erysipelothrix_phage(85.71%)	8	NA	NA
AYF41917.1|2075463_2075658_+	hypothetical protein	NA	A0A2K5B299	Erysipelothrix_phage	58.5	2.2e-15
AYF41918.1|2075660_2076242_+	hypothetical protein	NA	A0A2K5B2A0	Erysipelothrix_phage	47.6	3.7e-45
AYF41919.1|2076238_2078719_+	glycosyl hydrolase	NA	A0A2K5B2A1	Erysipelothrix_phage	68.3	0.0e+00
AYF41920.1|2078806_2079220_+|holin	holin	holin	A0A2K5B2A2	Erysipelothrix_phage	71.3	1.3e-49
AYF41921.1|2079222_2080173_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A2K5B2A3	Erysipelothrix_phage	43.3	2.5e-51
AYF41922.1|2080294_2080717_+	RNA polymerase subunit sigma-70	NA	NA	NA	NA	NA
AYF41923.1|2080931_2082725_+	recombinase family protein	NA	A0A2K5B2B4	Erysipelothrix_phage	43.2	2.8e-75
AYF41924.1|2082703_2084287_+	recombinase family protein	NA	Q6DMS5	Streptococcus_phage	52.3	1.4e-147
