The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP024811	Halomonas alkaliphila X3, complete sequence	4029514	8009	15359	4029514	integrase	Halomonas_phage(33.33%)	10	3491:3504	21743:21756
3491:3504	attL	GCGCACAAAGCGGC	NA	NA	NA	NA
AYF32318.1|8009_8327_+	hypothetical protein	NA	A0A1J0GUV9	Halomonas_phage	47.4	7.9e-10
AYF32319.1|8337_9390_+	hypothetical protein	NA	A0A291L9Z9	Bordetella_phage	47.1	2.3e-82
AYF32320.1|9797_10766_+	hypothetical protein	NA	NA	NA	NA	NA
AYF32321.1|10762_11068_+	hypothetical protein	NA	NA	NA	NA	NA
AYF32322.1|11064_12633_+	DNA (cytosine-5-)-methyltransferase	NA	A0A1I9KFD6	Aeromonas_phage	47.3	1.3e-134
AYF32323.1|12629_13097_+	hypothetical protein	NA	A0A2P1JRA0	Mycobacterium_phage	62.3	3.5e-46
AYF32324.1|13099_13477_+	hypothetical protein	NA	NA	NA	NA	NA
AYF32325.1|13473_13986_+	hypothetical protein	NA	A0A1J0GUW8	Halomonas_phage	45.6	5.5e-37
AYF32326.1|13990_14194_+	hypothetical protein	NA	NA	NA	NA	NA
AYF32327.1|14144_15359_-|integrase	integrase	integrase	Q7M297	Enterobacteria_phage	40.4	6.0e-82
21743:21756	attR	GCCGCTTTGTGCGC	NA	NA	NA	NA
>prophage 2
CP024811	Halomonas alkaliphila X3, complete sequence	4029514	3553798	3561224	4029514		Enterobacteria_phage(16.67%)	8	NA	NA
AYF35263.1|3553798_3555028_-	uracil permease	NA	Q9KX94	Enterobacteria_phage	39.1	2.5e-59
AYF35264.1|3555116_3555746_-	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
AYF35265.1|3555843_3556527_-	uracil-DNA glycosylase	NA	A0A0B4Q626	Equid_gammaherpesvirus	47.1	1.2e-47
AYF35266.1|3556528_3557008_-	xanthine phosphoribosyltransferase	NA	NA	NA	NA	NA
AYF35267.1|3557016_3557562_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	45.0	6.3e-31
AYF35268.1|3557596_3558895_-	guanine permease	NA	A0A0R6PHV4	Moraxella_phage	40.6	3.2e-73
AYF35269.1|3559093_3559720_-	riboflavin synthase	NA	A0A1V0SE20	Indivirus	33.9	1.7e-19
AYF35270.1|3560180_3561224_+	methionine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.7	6.2e-35
>prophage 3
CP024811	Halomonas alkaliphila X3, complete sequence	4029514	3958076	4017385	4029514	capsid,portal,transposase,terminase,tRNA,integrase,holin	Enterobacteria_phage(14.71%)	75	3994117:3994132	4021853:4021868
AYF35604.1|3958076_3959354_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	43.6	8.2e-90
AYF35605.1|3959695_3960949_+	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA	NA
AYF35606.1|3961065_3961656_+	DUF4202 domain-containing protein	NA	NA	NA	NA	NA
AYF35607.1|3961743_3964848_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
AYF35608.1|3964868_3965672_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	51.9	2.0e-62
AYF35609.1|3965680_3966700_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	55.5	1.2e-94
AYF35610.1|3966736_3967309_-	anthranilate/aminodeoxychorismate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	61.5	3.3e-67
AYF35611.1|3967491_3967764_+	hypothetical protein	NA	NA	NA	NA	NA
AYF35612.1|3967788_3968079_+	hypothetical protein	NA	NA	NA	NA	NA
AYF35613.1|3968341_3968575_+	DUF1654 domain-containing protein	NA	NA	NA	NA	NA
AYF35614.1|3968547_3969021_+	peptidase S24	NA	F1C5A6	Cronobacter_phage	44.5	2.1e-22
AYF35615.1|3969017_3970292_+	DNA polymerase V subunit UmuC	NA	I6RSM4	Salmonella_phage	40.1	1.2e-80
AYF35616.1|3970298_3970589_-	hypothetical protein	NA	NA	NA	NA	NA
AYF35617.1|3970816_3971008_-	hypothetical protein	NA	NA	NA	NA	NA
AYF35618.1|3971011_3971554_-	hypothetical protein	NA	NA	NA	NA	NA
AYF35619.1|3971550_3972063_-	hypothetical protein	NA	NA	NA	NA	NA
AYF35620.1|3972074_3972290_-	hypothetical protein	NA	NA	NA	NA	NA
AYF35621.1|3972265_3973564_-	hypothetical protein	NA	W6E8G0	Rhizobium_phage	29.2	2.2e-13
AYF35622.1|3973564_3974437_-	hypothetical protein	NA	NA	NA	NA	NA
AYF35623.1|3974440_3975913_-	hypothetical protein	NA	NA	NA	NA	NA
AYF35624.1|3975909_3982464_-	hypothetical protein	NA	A0A1J0GWA6	Alteromonas_phage	33.8	6.2e-24
AYF35625.1|3982553_3983015_-	hypothetical protein	NA	NA	NA	NA	NA
AYF35626.1|3983007_3983907_-|transposase	transposase	transposase	A0A0R6PHP9	Moraxella_phage	40.3	9.0e-51
AYF35627.1|3983985_3984543_-	hypothetical protein	NA	NA	NA	NA	NA
AYF35628.1|3984494_3984836_-	hypothetical protein	NA	NA	NA	NA	NA
AYF35629.1|3984913_3985861_-	hypothetical protein	NA	M4ST92	Rhodobacter_phage	29.2	2.2e-23
AYF35630.1|3985853_3986045_-	hypothetical protein	NA	NA	NA	NA	NA
AYF35631.1|3986106_3986835_-	hypothetical protein	NA	NA	NA	NA	NA
AYF35632.1|3986831_3987284_-	hypothetical protein	NA	NA	NA	NA	NA
AYF35633.1|3987270_3987606_-	hypothetical protein	NA	NA	NA	NA	NA
AYF35634.1|3987609_3988167_-	hypothetical protein	NA	K7PKT4	Enterobacteria_phage	62.2	8.4e-07
AYF35635.1|3988260_3988494_-	hypothetical protein	NA	NA	NA	NA	NA
AYF35636.1|3988571_3989870_-|capsid	phage major capsid protein	capsid	Q6UAX6	Klebsiella_phage	59.5	1.6e-136
AYF35637.1|3989939_3990878_-	serine peptidase	NA	Q7Y411	Yersinia_phage	50.7	1.1e-75
AYF35638.1|3990865_3992143_-|portal	phage portal protein	portal	Q6UAX8	Klebsiella_phage	64.3	5.6e-155
AYF35639.1|3992142_3992340_-	hypothetical protein	NA	Q8W630	Enterobacteria_phage	50.0	3.3e-06
AYF35640.1|3992333_3994049_-|terminase	terminase	terminase	U5P0Q5	Shigella_phage	53.1	2.0e-168
AYF35641.1|3994055_3994526_-|terminase	phage terminase small subunit P27 family	terminase	A4JWZ6	Burkholderia_virus	49.7	5.6e-36
3994117:3994132	attL	GCTAGCCGCGCACGGC	NA	NA	NA	NA
AYF35642.1|3994637_3995003_-	HNH endonuclease	NA	Q8W633	Enterobacteria_phage	51.7	4.5e-25
AYF35643.1|3995047_3995512_+	hypothetical protein	NA	NA	NA	NA	NA
AYF35644.1|3996069_3996420_-|holin	phage holin, lambda family	holin	A0A1W6JTC7	Pseudomonas_phage	46.4	1.5e-17
AYF35645.1|3996447_3996999_-	glycoside hydrolase	NA	D5LH07	Escherichia_phage	57.2	5.0e-44
AYF35646.1|3997292_3997673_+	hypothetical protein	NA	NA	NA	NA	NA
AYF35855.1|3997857_3998094_+	hypothetical protein	NA	NA	NA	NA	NA
AYF35647.1|3998093_3998984_+	hypothetical protein	NA	NA	NA	NA	NA
AYF35648.1|3998996_3999533_-	hypothetical protein	NA	NA	NA	NA	NA
AYF35856.1|3999613_4000117_-	VRR-NUC domain-containing protein	NA	A0A2D1GNH3	Pseudomonas_phage	39.6	3.6e-17
AYF35649.1|4000161_4000344_+	hypothetical protein	NA	NA	NA	NA	NA
AYF35650.1|4000355_4000667_-	hypothetical protein	NA	A0A1J0GUZ1	Halomonas_phage	48.9	9.1e-19
AYF35651.1|4000927_4001206_-	hypothetical protein	NA	NA	NA	NA	NA
AYF35652.1|4001209_4001518_-	hypothetical protein	NA	NA	NA	NA	NA
AYF35653.1|4001529_4002138_-	hypothetical protein	NA	A0A1J0GUU6	Halomonas_phage	36.1	1.6e-22
AYF35654.1|4002145_4003078_-	hypothetical protein	NA	A0A1W6JP36	Morganella_phage	27.4	5.6e-11
AYF35858.1|4003157_4003388_-	hypothetical protein	NA	A0A125RNS7	Pseudomonas_phage	61.9	1.6e-15
AYF35857.1|4003475_4004147_+	XRE family transcriptional regulator	NA	K7P850	Enterobacteria_phage	45.5	4.2e-45
AYF35655.1|4004220_4004967_+	hypothetical protein	NA	NA	NA	NA	NA
AYF35656.1|4004963_4005794_+	DUF3037 domain-containing protein	NA	NA	NA	NA	NA
AYF35657.1|4005913_4006321_+	hypothetical protein	NA	NA	NA	NA	NA
AYF35658.1|4006317_4006590_+	hypothetical protein	NA	NA	NA	NA	NA
AYF35659.1|4006586_4006874_+	hypothetical protein	NA	NA	NA	NA	NA
AYF35660.1|4006870_4007188_+	hypothetical protein	NA	A0A1J0GUV9	Halomonas_phage	47.4	7.9e-10
AYF35661.1|4007198_4008251_+	hypothetical protein	NA	A0A291L9Z9	Bordetella_phage	47.1	2.3e-82
AYF35662.1|4008658_4009627_+	hypothetical protein	NA	NA	NA	NA	NA
AYF35663.1|4009623_4009953_+	hypothetical protein	NA	NA	NA	NA	NA
AYF35664.1|4009924_4011493_+	DNA (cytosine-5-)-methyltransferase	NA	A0A1I9KFD6	Aeromonas_phage	47.3	1.3e-134
AYF35665.1|4011489_4011990_+	hypothetical protein	NA	A0A2P1JRA0	Mycobacterium_phage	62.3	2.8e-46
AYF35666.1|4011958_4012336_+	hypothetical protein	NA	NA	NA	NA	NA
AYF35667.1|4012332_4012845_+	hypothetical protein	NA	A0A1J0GUW8	Halomonas_phage	45.6	5.5e-37
AYF35668.1|4012849_4013053_+	hypothetical protein	NA	NA	NA	NA	NA
AYF35669.1|4013003_4014218_-|integrase	integrase	integrase	Q7M297	Enterobacteria_phage	40.4	6.0e-82
AYF35670.1|4014584_4014857_+	hypothetical protein	NA	NA	NA	NA	NA
AYF35671.1|4014881_4015172_+	hypothetical protein	NA	NA	NA	NA	NA
AYF35672.1|4015434_4015668_+	DUF1654 domain-containing protein	NA	NA	NA	NA	NA
AYF35673.1|4015640_4016114_+	peptidase S24	NA	F1C5A6	Cronobacter_phage	44.5	2.1e-22
AYF35674.1|4016110_4017385_+	DNA polymerase V subunit UmuC	NA	I6RSM4	Salmonella_phage	40.1	1.2e-80
4021853:4021868	attR	GCTAGCCGCGCACGGC	NA	NA	NA	NA
