assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003612795.1_ASM361279v1	CP024811	Halomonas alkaliphila X3, complete sequence	1	112353-112449	1	CRISPRCasFinder	no		csa3,DEDDh,DinG,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,PD-DExK,WYL,RT	Orphan	TTGGAGCGGGAAAAGAGATTCGA	23	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,DinG,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,PD-DExK,WYL,RT	NA|161aa|up_5|CP024811.1_107356_107839_-,NA	NA|553aa|up_9|CP024811.1_102712_104371_+	COG4425, COG4425, Predicted membrane protein [Function unknown]	NA|229aa|up_8|CP024811.1_104500_105187_-	cd03141, GATase1_Hsp31_like, Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Escherichia coli Hsp31 protein	NA|246aa|up_7|CP024811.1_105295_106033_-	cd03029, GRX_hybridPRX5, Glutaredoxin (GRX) family, PRX5 hybrid subfamily; composed of hybrid proteins containing peroxiredoxin (PRX) and GRX domains, which is found in some pathogenic bacteria and cyanobacteria	NA|262aa|up_6|CP024811.1_106191_106977_+	pfam18796, LPD1, Large polyvalent protein-associated domain 1	NA|161aa|up_5|CP024811.1_107356_107839_-	NA	NA|173aa|up_4|CP024811.1_108405_108924_-	pfam09500, YiiD_C, Putative thioesterase (yiiD_Cterm)	NA|187aa|up_3|CP024811.1_108929_109490_-	PRK10828, PRK10828, putative oxidoreductase; Provisional	NA|278aa|up_2|CP024811.1_109537_110371_-	PRK11792, queF, 7-cyano-7-deazaguanine reductase; Provisional	NA|258aa|up_1|CP024811.1_110428_111202_-	PRK15066, PRK15066, inner membrane transport permease; Provisional	NA|321aa|up_0|CP024811.1_111198_112161_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|133aa|down_0|CP024811.1_113374_113773_+	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB	NA|318aa|down_1|CP024811.1_113893_114847_+	PRK09563, rbgA, GTPase YlqF; Reviewed	NA|416aa|down_2|CP024811.1_114902_116150_+	PRK09265, PRK09265, aminotransferase AlaT; Validated	NA|302aa|down_3|CP024811.1_116256_117162_+	PRK05457, PRK05457, protease HtpX	NA|392aa|down_4|CP024811.1_117259_118435_-	cd12158, ErythrP_dh, D-Erythronate-4-Phosphate Dehydrogenase NAD-binding and catalytic domains	NA|94aa|down_5|CP024811.1_118519_118801_+	cd08001, WGR_PARP1_like, WGR domain of poly(ADP-ribose) polymerase 1 and similar proteins	NA|112aa|down_6|CP024811.1_118899_119235_-	pfam05768, DUF836, Glutaredoxin-like domain (DUF836)	NA|741aa|down_7|CP024811.1_119254_121477_-	PRK11783, rlmL, bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA|70aa|down_8|CP024811.1_121818_122028_+	pfam04957, RMF, Ribosome modulation factor	NA|338aa|down_9|CP024811.1_122099_123113_-	PRK05286, PRK05286, quinone-dependent dihydroorotate dehydrogenase
GCA_003612795.1_ASM361279v1	CP024811	Halomonas alkaliphila X3, complete sequence	2	1016404-1021191	2,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	csa3,DEDDh,DinG,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,PD-DExK,WYL,RT	Type I-E	CGGTTCATCCCCGCCTGTGCGGGGATCGG,CGGTTCATCCCCGCCTGTGCGGGGATCGG,CGGTTCATCCCCGCCTGTGCGGGGATCGG	29,29,29	4	7	1018690-1018721|1018690-1018721|1020093-1020125|1020093-1020125|1020155-1020186|1020521-1020552|1020521-1020552	CP024811.1_8037-8006|CP024811.1_4006898-4006867|CP024811.1_3981198-3981230|CP024811.1_4028281-4028313|CP024811.1_3992944-3992975|CP024811.1_3967362-3967331|CP024811.1_4014455-4014424	I-E:I-E:I-E	78,78,73	78	TypeI-E	csa3,DEDDh,DinG,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,PD-DExK,WYL,RT	NA|208aa|up_2|CP024811.1_1014047_1014671_+,NA|101aa|up_1|CP024811.1_1015036_1015339_+,NA|221aa|down_9|CP024811.1_1030857_1031520_+	NA|180aa|up_9|CP024811.1_1005859_1006399_+	cd01610, PAP2_like, PAP2_like proteins, a super-family of histidine phosphatases and vanadium haloperoxidases, includes type 2 phosphatidic acid phosphatase or lipid phosphate phosphatase (LPP), Glucose-6-phosphatase, Phosphatidylglycerophosphatase B and bacterial acid phosphatase, vanadium chloroperoxidases, vanadium bromoperoxidases, and several other mostly uncharacterized subfamilies	NA|45aa|up_8|CP024811.1_1007344_1007479_+	COG5510, COG5510, Predicted small secreted protein [Function unknown]	NA|171aa|up_7|CP024811.1_1007484_1007997_+	COG2945, COG2945, Predicted hydrolase of the alpha/beta superfamily [General function prediction only]	NA|283aa|up_6|CP024811.1_1008396_1009245_+	pfam04187, Cofac_haem_bdg, Haem-binding uptake, Tiki superfamily, ChaN	NA|477aa|up_5|CP024811.1_1009324_1010755_-	TIGR01818, Nitrogen_assimilation_regulatory_protein, nitrogen regulation protein NR(I)	NA|353aa|up_4|CP024811.1_1010751_1011810_-	COG3852, NtrB, Signal transduction histidine kinase, nitrogen specific [Signal transduction mechanisms]	NA|469aa|up_3|CP024811.1_1012169_1013576_-	PRK09469, glnA, glutamate--ammonia ligase	NA|208aa|up_2|CP024811.1_1014047_1014671_+	NA	NA|101aa|up_1|CP024811.1_1015036_1015339_+	NA	NA|269aa|up_0|CP024811.1_1015420_1016227_-	PRK10334, PRK10334, small-conductance mechanosensitive channel MscS	cas2|98aa|down_0|CP024811.1_1021301_1021595_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|307aa|down_1|CP024811.1_1021595_1022516_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|230aa|down_2|CP024811.1_1022525_1023215_-	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions	cas5|252aa|down_3|CP024811.1_1023214_1023970_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|364aa|down_4|CP024811.1_1023978_1025070_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|222aa|down_5|CP024811.1_1025130_1025796_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|567aa|down_6|CP024811.1_1025795_1027496_-	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	NA|144aa|down_7|CP024811.1_1027584_1028016_+	pfam01724, DUF29, Domain of unknown function DUF29	cas3|892aa|down_8|CP024811.1_1028021_1030697_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|221aa|down_9|CP024811.1_1030857_1031520_+	NA
