The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP024087	Micromonospora tulbaghiae strain CNY-010 chromosome, complete genome	7228472	895682	985390	7228472	transposase	Staphylococcus_phage(30.77%)	58	NA	NA
AYF26668.1|895682_896972_+|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	39.0	1.5e-35
AYF26669.1|897374_898007_-	adenylate kinase	NA	NA	NA	NA	NA
AYF26670.1|898267_902191_-	hypothetical protein	NA	NA	NA	NA	NA
AYF26671.1|902305_903403_-	hypothetical protein	NA	NA	NA	NA	NA
AYF26672.1|905574_910236_+	hypothetical protein	NA	NA	NA	NA	NA
AYF26673.1|910235_911525_+|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	39.0	1.5e-35
AYF26674.1|911602_911938_-	hypothetical protein	NA	A0A2P1JR32	Mycobacterium_phage	59.1	3.3e-22
AYF26675.1|911918_913271_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	33.6	9.2e-31
AYF26676.1|913197_913983_-	hypothetical protein	NA	A0A1B3AZE5	Gordonia_phage	52.6	1.5e-49
AYF26677.1|913979_914306_-	hypothetical protein	NA	A0A1B3AZF8	Gordonia_phage	54.8	9.3e-22
AYF26678.1|914279_915425_+	hypothetical protein	NA	NA	NA	NA	NA
AYF26679.1|915709_915988_+	hypothetical protein	NA	NA	NA	NA	NA
AYF26680.1|916111_916513_+	hypothetical protein	NA	NA	NA	NA	NA
AYF26681.1|917278_917737_+	hypothetical protein	NA	NA	NA	NA	NA
AYF26682.1|920044_920479_-	hypothetical protein	NA	NA	NA	NA	NA
AYF26683.1|921655_921982_+	hypothetical protein	NA	NA	NA	NA	NA
AYF26684.1|923344_924325_-	hypothetical protein	NA	NA	NA	NA	NA
AYF26685.1|924817_926089_-	TIGR02679 family protein	NA	NA	NA	NA	NA
AYF26686.1|926085_930435_-	TIGR02680 family protein	NA	NA	NA	NA	NA
AYF26687.1|930431_931886_-	hypothetical protein	NA	NA	NA	NA	NA
AYF26688.1|931882_933403_-	TIGR02677 family protein	NA	NA	NA	NA	NA
AYF26689.1|933701_937988_-	hypothetical protein	NA	NA	NA	NA	NA
AYF26690.1|938155_940126_-	hypothetical protein	NA	NA	NA	NA	NA
AYF26691.1|941679_942822_-	hypothetical protein	NA	NA	NA	NA	NA
AYF26692.1|942818_944096_-	hypothetical protein	NA	NA	NA	NA	NA
AYF26693.1|944688_946032_-	hypothetical protein	NA	NA	NA	NA	NA
AYF26694.1|946368_946695_+	hypothetical protein	NA	A0A1B3AZF8	Gordonia_phage	53.3	1.7e-20
AYF26695.1|946691_947198_+	hypothetical protein	NA	A0A0N7C035	Escherichia_phage	47.7	5.3e-16
AYF26696.1|947125_947473_+	hypothetical protein	NA	A0A1B3AZE5	Gordonia_phage	57.6	7.1e-12
AYF26697.1|947399_948752_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	33.6	9.2e-31
AYF26698.1|949099_949570_-	hypothetical protein	NA	NA	NA	NA	NA
AYF26699.1|949794_950868_-	hypothetical protein	NA	NA	NA	NA	NA
AYF26700.1|951000_953082_-	methyltransferase, FxLD system	NA	NA	NA	NA	NA
AYF26701.1|953096_954359_-	lanthionine synthetase	NA	A0A2H4PQH9	Staphylococcus_phage	20.1	5.6e-06
AYF26702.1|954355_957373_-	lantibiotic dehydratase	NA	NA	NA	NA	NA
AYF26703.1|957482_957617_-	FxLD family lantipeptide	NA	NA	NA	NA	NA
AYF26704.1|957991_960094_+	hypothetical protein	NA	A0A2H4PQS8	Staphylococcus_phage	45.3	3.1e-17
AYF26705.1|960965_961283_+	hypothetical protein	NA	NA	NA	NA	NA
AYF26706.1|961677_962307_+	N-acetyltransferase	NA	NA	NA	NA	NA
AYF26707.1|962519_962807_+	hypothetical protein	NA	NA	NA	NA	NA
AYF26708.1|962818_964264_+	amino acid permease	NA	NA	NA	NA	NA
AYF26709.1|964531_965266_+	hypothetical protein	NA	NA	NA	NA	NA
AYF26710.1|965262_966471_+	histidine decarboxylase	NA	NA	NA	NA	NA
AYF26711.1|966513_967659_+	class II histone deacetylase	NA	A0A2K9KZC4	Tupanvirus	37.2	2.7e-44
AYF26712.1|967720_968476_+	hypothetical protein	NA	NA	NA	NA	NA
AYF26713.1|968488_969397_+	hypothetical protein	NA	NA	NA	NA	NA
AYF26714.1|969544_970216_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AYF26715.1|970527_970896_-	hypothetical protein	NA	NA	NA	NA	NA
AYF26716.1|971034_971325_-	barnase inhibitor	NA	NA	NA	NA	NA
AYF26717.1|971548_971749_+	hypothetical protein	NA	NA	NA	NA	NA
AYF26718.1|971924_973058_-|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
AYF26719.1|973087_973420_-	bleomycin resistance family protein	NA	NA	NA	NA	NA
AYF26720.1|973784_974459_+	hypothetical protein	NA	NA	NA	NA	NA
AYF26721.1|974650_975559_-	hypothetical protein	NA	NA	NA	NA	NA
AYF26722.1|975804_977646_+	heat-shock protein Hsp70	NA	NA	NA	NA	NA
AYF26723.1|978127_979639_+	hypothetical protein	NA	NA	NA	NA	NA
AYF26724.1|981217_983698_+	hypothetical protein	NA	NA	NA	NA	NA
AYF26725.1|984073_985390_-|transposase	ISL3 family transposase	transposase	NA	NA	NA	NA
>prophage 2
CP024087	Micromonospora tulbaghiae strain CNY-010 chromosome, complete genome	7228472	1131411	1225267	7228472	transposase	Acinetobacter_phage(22.22%)	58	NA	NA
AYF26838.1|1131411_1132580_-|transposase	transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	30.7	2.3e-30
AYF26839.1|1133351_1133987_-	hypothetical protein	NA	NA	NA	NA	NA
AYF26840.1|1134492_1135095_+	hypothetical protein	NA	NA	NA	NA	NA
AYF26841.1|1137446_1140011_+	peptidase	NA	NA	NA	NA	NA
AYF26842.1|1140480_1140831_-	hypothetical protein	NA	NA	NA	NA	NA
AYF26843.1|1144339_1144630_-	hypothetical protein	NA	NA	NA	NA	NA
AYF26844.1|1145144_1146038_+|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AYF26845.1|1146135_1147599_-	peptidase	NA	NA	NA	NA	NA
AYF26846.1|1147769_1148729_-	hypothetical protein	NA	NA	NA	NA	NA
AYF26847.1|1150083_1150473_+	hypothetical protein	NA	NA	NA	NA	NA
AYF26848.1|1150971_1151595_+	superoxide dismutase	NA	NA	NA	NA	NA
AYF26849.1|1151591_1151852_+	superoxide dismutase	NA	NA	NA	NA	NA
AYF26850.1|1154193_1155033_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
AYF26851.1|1154931_1155420_+	hypothetical protein	NA	NA	NA	NA	NA
AYF26852.1|1155541_1156132_-	hypothetical protein	NA	NA	NA	NA	NA
AYF26853.1|1156320_1156755_+	hypothetical protein	NA	NA	NA	NA	NA
AYF26854.1|1156780_1157992_+	hypothetical protein	NA	NA	NA	NA	NA
AYF26855.1|1158051_1158927_+	hypothetical protein	NA	NA	NA	NA	NA
AYF26856.1|1158923_1159952_+	hypothetical protein	NA	NA	NA	NA	NA
AYF26857.1|1159756_1160752_+	high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG	NA	G3M9Y6	Bacillus_virus	23.9	3.6e-08
AYF26858.1|1160738_1161434_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
AYF26859.1|1161390_1162689_+	hypothetical protein	NA	NA	NA	NA	NA
AYF26860.1|1162726_1163662_+	hypothetical protein	NA	NA	NA	NA	NA
AYF26861.1|1163687_1164617_+	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	30.5	1.8e-25
AYF26862.1|1164635_1166261_+	1-pyrroline-5-carboxylate dehydrogenase	NA	NA	NA	NA	NA
AYF26863.1|1166740_1167577_-	hypothetical protein	NA	NA	NA	NA	NA
AYF26864.1|1168751_1169531_-|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AYF26865.1|1169547_1169838_+	hypothetical protein	NA	NA	NA	NA	NA
AYF26866.1|1169994_1170447_-	hypothetical protein	NA	NA	NA	NA	NA
AYF26867.1|1170963_1172268_+	hypothetical protein	NA	NA	NA	NA	NA
AYF26868.1|1172278_1172926_+	response regulator	NA	NA	NA	NA	NA
AYF26869.1|1173083_1173434_-	hypothetical protein	NA	NA	NA	NA	NA
AYF26870.1|1173859_1174252_-	hypothetical protein	NA	NA	NA	NA	NA
AYF26871.1|1176037_1176154_-	hypothetical protein	NA	NA	NA	NA	NA
AYF26872.1|1176441_1177005_-	hypothetical protein	NA	NA	NA	NA	NA
AYF26873.1|1177011_1178180_-|transposase	transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	30.7	2.3e-30
AYF26874.1|1180780_1181515_-	GPP34 family phosphoprotein	NA	NA	NA	NA	NA
AYF26875.1|1182077_1183718_+	recombinase RecQ	NA	F2NZ48	Diadromus_pulchellus_ascovirus	38.6	4.8e-58
AYF26876.1|1184099_1184486_-	hypothetical protein	NA	NA	NA	NA	NA
AYF26877.1|1184569_1185034_+	hypothetical protein	NA	NA	NA	NA	NA
AYF26878.1|1188002_1188620_-	cysteine hydrolase	NA	NA	NA	NA	NA
AYF26879.1|1188632_1190717_-	amylo-alpha-1,6-glucosidase	NA	NA	NA	NA	NA
AYF26880.1|1193581_1194421_+	aminoglycoside 3-N-acetyltransferase	NA	NA	NA	NA	NA
AYF26881.1|1194541_1194811_-	hypothetical protein	NA	NA	NA	NA	NA
AYF26882.1|1197596_1197821_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AYF26883.1|1199928_1201245_+|transposase	ISL3 family transposase	transposase	NA	NA	NA	NA
AYF26884.1|1202028_1202280_+	hypothetical protein	NA	NA	NA	NA	NA
AYF26885.1|1202554_1202860_-	hypothetical protein	NA	A0A2P1JQX9	Mycobacterium_phage	58.8	7.6e-18
AYF26886.1|1204736_1206407_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AYF26887.1|1206403_1207336_+	peptide ABC transporter permease	NA	NA	NA	NA	NA
AYF26888.1|1207335_1208325_+	ABC transporter permease	NA	NA	NA	NA	NA
AYF26889.1|1208321_1209293_+	peptide ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	1.1e-14
AYF26890.1|1209289_1210252_+	peptide ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.2	5.2e-20
AYF26891.1|1210246_1211203_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AYF26892.1|1211864_1212620_+	hypothetical protein	NA	NA	NA	NA	NA
AYF26893.1|1218141_1218573_+	anti-anti-sigma factor	NA	NA	NA	NA	NA
AYF26894.1|1220050_1221049_-	tellurium resistance protein TerC	NA	K7QKE8	Escherichia_phage	35.9	2.0e-43
AYF26895.1|1224484_1225267_-|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
>prophage 3
CP024087	Micromonospora tulbaghiae strain CNY-010 chromosome, complete genome	7228472	3932068	3944714	7228472	portal,capsid	Mycobacterium_phage(33.33%)	19	NA	NA
AYF29292.1|3932068_3932770_+	site-specific DNA-methyltransferase	NA	O03956	Myxococcus_phage	57.3	5.7e-69
AYF29293.1|3932766_3933084_+	hypothetical protein	NA	NA	NA	NA	NA
AYF29294.1|3933344_3934268_+	hypothetical protein	NA	A0A097EWG5	Mycobacterium_phage	58.7	2.1e-31
AYF29295.1|3934264_3934873_+	hypothetical protein	NA	A0A1J0MC74	Streptomyces_phage	45.2	1.4e-07
AYF29296.1|3934869_3935640_+	hypothetical protein	NA	NA	NA	NA	NA
AYF29297.1|3935754_3936093_+	HNH endonuclease	NA	A0A2H4J9P9	uncultured_Caudovirales_phage	45.6	3.9e-15
AYF29298.1|3936110_3936290_+	hypothetical protein	NA	E7EJQ8	Mycobacterium_phage	67.3	1.7e-14
AYF29299.1|3936426_3936726_+	hypothetical protein	NA	Q9ZX74	Mycobacterium_phage	62.5	1.0e-11
AYF29300.1|3938214_3939666_+|portal	portal protein	portal	G1BSM7	Mycobacterium_virus	58.5	2.0e-153
AYF29301.1|3939649_3940369_+	hypothetical protein	NA	A0A1D8ETP7	Propionibacterium_phage	39.0	1.8e-25
AYF29302.1|3940429_3940705_+	hypothetical protein	NA	NA	NA	NA	NA
AYF29303.1|3940841_3941429_+	hypothetical protein	NA	NA	NA	NA	NA
AYF29304.1|3941447_3942350_+|capsid	major capsid protein	capsid	A0A2H4IYA3	uncultured_Caudovirales_phage	69.2	5.4e-112
AYF29305.1|3942513_3942768_+	hypothetical protein	NA	NA	NA	NA	NA
AYF29306.1|3942782_3943259_+	hypothetical protein	NA	A0A2P1CHH2	Mycobacterium_phage	56.1	6.0e-38
AYF29307.1|3943255_3943606_+	hypothetical protein	NA	A0A2H5BLV9	Streptomyces_phage	48.3	8.2e-08
AYF29308.1|3943609_3943909_+	hypothetical protein	NA	NA	NA	NA	NA
AYF29309.1|3943908_3944364_+	hypothetical protein	NA	NA	NA	NA	NA
AYF29310.1|3944381_3944714_+	hypothetical protein	NA	A0A2H5BLW5	Streptomyces_phage	41.1	1.5e-14
>prophage 4
CP024087	Micromonospora tulbaghiae strain CNY-010 chromosome, complete genome	7228472	4645539	4695292	7228472	bacteriocin,integrase,protease,transposase	Agrobacterium_phage(16.67%)	33	4678740:4678799	4696986:4697812
AYF29960.1|4645539_4646130_+|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	49.7	2.7e-43
AYF29961.1|4646177_4647965_-	adenylyl cyclase	NA	NA	NA	NA	NA
AYF29962.1|4648085_4648862_-	HAD family hydrolase	NA	NA	NA	NA	NA
AYF29963.1|4649134_4650166_+	hypothetical protein	NA	NA	NA	NA	NA
AYF29964.1|4650624_4651338_+	hypothetical protein	NA	NA	NA	NA	NA
AYF29965.1|4651488_4652280_+	alpha/beta hydrolase	NA	A0A2D1GCA0	Mycobacterium_phage	32.6	1.6e-06
AYF29966.1|4652310_4652928_-	hypothetical protein	NA	NA	NA	NA	NA
AYF29967.1|4653034_4653397_+	hypothetical protein	NA	NA	NA	NA	NA
AYF29968.1|4654174_4656097_+	ATP-dependent endonuclease	NA	NA	NA	NA	NA
AYF29969.1|4656093_4657755_+	DNA helicase UvrD	NA	A0A1V0SDG5	Indivirus	26.1	2.9e-10
AYF29970.1|4658009_4658579_-	hypothetical protein	NA	NA	NA	NA	NA
AYF29971.1|4658612_4659047_-	NUDIX hydrolase	NA	NA	NA	NA	NA
AYF29972.1|4659080_4659863_-|bacteriocin	bacteriocin biosynthesis protein	bacteriocin	NA	NA	NA	NA
AYF29973.1|4659874_4660945_-	lanthionine synthetase	NA	NA	NA	NA	NA
AYF29974.1|4663755_4663911_-	FxLD family lantipeptide	NA	NA	NA	NA	NA
AYF29975.1|4663923_4665165_-	methyltransferase, FxLD system	NA	NA	NA	NA	NA
AYF29976.1|4669126_4669843_-	creatinine amidohydrolase	NA	NA	NA	NA	NA
AYF29977.1|4669846_4671079_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AYF29978.1|4671358_4672765_+	amino acid permease	NA	NA	NA	NA	NA
AYF29979.1|4672770_4673775_+	acetamidase	NA	NA	NA	NA	NA
AYF29980.1|4673907_4676388_+	hypothetical protein	NA	NA	NA	NA	NA
AYF29981.1|4676481_4677396_+|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AYF29982.1|4677526_4678671_-|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	36.5	7.5e-34
4678740:4678799	attL	GCGCGGTATCTGCCGTCGGCGGTGACCGGTGGCAGGCCGCGGGTTGATGACCGGCGGGTG	NA	NA	NA	NA
AYF29983.1|4679625_4680519_+	hypothetical protein	NA	NA	NA	NA	NA
AYF29984.1|4680953_4681250_-	hypothetical protein	NA	NA	NA	NA	NA
AYF29985.1|4681275_4682286_-	hypothetical protein	NA	NA	NA	NA	NA
AYF29986.1|4681761_4682664_+	hypothetical protein	NA	NA	NA	NA	NA
AYF29987.1|4682986_4684456_-|integrase	site-specific integrase	integrase	A0A2H4JCB7	uncultured_Caudovirales_phage	28.7	1.1e-26
AYF29988.1|4686124_4686499_-	DNA-binding protein	NA	A0A142K9K9	Gordonia_phage	57.6	1.8e-08
AYF29989.1|4688632_4689517_+	hypothetical protein	NA	NA	NA	NA	NA
AYF29990.1|4692197_4693160_+	reverse transcriptase	NA	NA	NA	NA	NA
AYF29991.1|4693769_4694198_-	hypothetical protein	NA	NA	NA	NA	NA
AYF29992.1|4694800_4695292_-|transposase	transposase	transposase	NA	NA	NA	NA
4696986:4697812	attR	CACCCGCCGGTCATCAACCCGCGGCCTGCCACCGGTCACCGCCGACGGCAGATACCGCGCCAACGCTTCCCACTCGACGTTAGACAACTCGTAGCGACGACCCACGCGCTACATCATCCGACACCAAGATCCTTTGAAGACACCGCCTAGTTGCGCAGGCTCTACGCCCGCCGGATCAGAAGGTTAGTACTCCAACGTCACTTGGCCTGTCTGCGCTGGTAGTGGGATCGGCGGGCTCGGGCTTGGGACGTTCGTCGCCGGTCCAGATGCCACCGTTGTTGTCCGGGAAATTCGCCACCGAACTGCCCCATGTCAGCTGGGTGGTCTGGCCGGTCGCGTCGGTCTGCTGAATGGCCCGGCCGGACGAGTCATAGGTGGTCTGCATCACCAGCTTGTTACGCGGATCGGTGATGCTGTTCAGTCGCTGGCTCGCGTCATAGGTGTACTTCGTGACGCCACCATTGAGGTCGCGCACCGTGGCGAGCCGCTTGCCCGTGTCGTAGGTGTAGGTGAGGTACCGGCCGTCGGCGAGGGTGACCCGGTTCAGCCGGCCCGACGTGGCGTCGTATGCGAAGGTGTCGGTACGGCCTGCCCCGTCCGTGACACCGGTCAGCTTCGAGTTGGTACAGCTGAAGCTGAGCCCCATGCCCGACCGGTCCTTCCAGGACGCCAGGTAACCCGCCGAGTCGAGGGTGAGCTTTTCCTGGTTGACCGTGGTGAGTGCCAAACCGGTGGCGAGGGCGCCGGCGAGGGTGGCCTGACTCCCGCGGAGGCGGGTTGAACCGCCCCGGGTTCTGTGGAGTCTCTACAAGATCCGGGCGGTTCAC	NA	NA	NA	NA
>prophage 6
CP024087	Micromonospora tulbaghiae strain CNY-010 chromosome, complete genome	7228472	5380275	5389665	7228472		Mycobacterium_phage(57.14%)	12	NA	NA
AYF30636.1|5380275_5380749_-	hypothetical protein	NA	A0A1I9SC95	Mycobacterium_phage	40.9	1.8e-18
AYF30637.1|5380717_5381425_+	hypothetical protein	NA	NA	NA	NA	NA
AYF30638.1|5381647_5382112_-	hypothetical protein	NA	NA	NA	NA	NA
AYF30639.1|5382108_5382357_-	hypothetical protein	NA	NA	NA	NA	NA
AYF30640.1|5382636_5382834_-	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
AYF30641.1|5382936_5383239_+	hypothetical protein	NA	G8I6R7	Mycobacterium_virus	46.9	3.2e-16
AYF30642.1|5383248_5384607_+	3-oxoacyl-ACP reductase	NA	E5ERI5	Ostreococcus_lucimarinus_virus	30.9	4.4e-09
AYF30643.1|5384813_5385662_+	hypothetical protein	NA	NA	NA	NA	NA
AYF30644.1|5385748_5386501_+	DNA hydrolase	NA	A0A0H4J2U2	Stenotrophomonas_phage	35.4	5.5e-09
AYF30645.1|5386497_5387439_+	serine/threonine protein kinase	NA	C9DB41	Mycobacterium_phage	35.4	3.8e-44
AYF30646.1|5387449_5388409_+	hypothetical protein	NA	A0A1C9EHM9	Mycobacterium_phage	44.0	9.3e-62
AYF30647.1|5388405_5389665_+	adenylosuccinate synthetase	NA	G1FIX2	Mycobacterium_phage	46.4	2.6e-80
