assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003609755.1_ASM360975v1	AP017991	Planktothrix agardhii NIES-204 DNA, complete genome	2	668020-669599	1,2,1,2	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,csx18,cas1,cas2	csa3,DEDDh,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,csx18,cas1,cas2,RT,cas3,cas5,cas8c,cas7,Cas14c_CAS-V-F,cas14j,c2c9_V-U4,cas4,cas6,csc1gr5,csc2gr7,cas10d,WYL,DinG,c2c10_CAS-V-U3,PD-DExK	Type III-C,Type III-A,Type III-B,Type III-D	CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC,CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC,CTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC,TCTCCCTACTCGCTAGGGAAATTAATTGATTGGAAAC	36,36,36,37	0	0	NA	NA	NA:NA:NA:NA	18,20,20,18	20	TypeIII-C,TypeIII-A,TypeIII-B,TypeIII-D	csa3,DEDDh,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,csx18,cas1,cas2,RT,cas3,cas5,cas8c,cas7,Cas14c_CAS-V-F,cas14j,c2c9_V-U4,cas4,cas6,csc1gr5,csc2gr7,cas10d,WYL,DinG,c2c10_CAS-V-U3,PD-DExK	cmr5gr11|131aa|up_5|AP017991.1_662255_662648_+,csx1|491aa|up_3|AP017991.1_664653_666126_+,csx18|94aa|up_2|AP017991.1_666272_666554_+,NA|42aa|down_4|AP017991.1_675708_675834_-,NA|84aa|down_6|AP017991.1_677310_677562_+	NA|603aa|up_9|AP017991.1_655031_656840_+	TIGR03423, pbp2_mrdA, penicillin-binding protein 2	cas10|1008aa|up_8|AP017991.1_657287_660311_+	pfam12469, DUF3692, CRISPR-associated protein	cmr3gr5|364aa|up_7|AP017991.1_660310_661402_+	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3	cmr4gr7|277aa|up_6|AP017991.1_661404_662235_+	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4	cmr5gr11|131aa|up_5|AP017991.1_662255_662648_+	NA	cmr6gr7|662aa|up_4|AP017991.1_662649_664635_+	cd09661, Cmr6_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr6	csx1|491aa|up_3|AP017991.1_664653_666126_+	NA	csx18|94aa|up_2|AP017991.1_666272_666554_+	NA	cas1|331aa|up_1|AP017991.1_666557_667550_+	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	cas2|94aa|up_0|AP017991.1_667549_667831_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|334aa|down_0|AP017991.1_670571_671573_-	cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family	NA|421aa|down_1|AP017991.1_671634_672897_-	PRK11856, PRK11856, branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed	NA|149aa|down_2|AP017991.1_672985_673432_-	pfam11068, YlqD, YlqD protein	NA|651aa|down_3|AP017991.1_673593_675546_-	cd17640, LC_FACS_like, Long-chain fatty acid CoA synthetase	NA|42aa|down_4|AP017991.1_675708_675834_-	NA	NA|254aa|down_5|AP017991.1_675958_676720_+	COG1842, PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription [Transcription / Signal transduction mechanisms]	NA|84aa|down_6|AP017991.1_677310_677562_+	NA	NA|104aa|down_7|AP017991.1_677667_677979_+	cd03418, GRX_GRXb_1_3_like, Glutaredoxin (GRX) family, GRX bacterial class 1 and 3 (b_1_3)-like subfamily; composed of bacterial GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain	NA|686aa|down_8|AP017991.1_678227_680285_+	PRK12740, PRK12740, elongation factor G-like protein EF-G2	NA|157aa|down_9|AP017991.1_680472_680943_-	TIGR04062, hypothetical_protein_CY0110_29519, dnd system-associated protein 4
GCA_003609755.1_ASM360975v1	AP017991	Planktothrix agardhii NIES-204 DNA, complete genome	3	736894-736972	3	CRISPRCasFinder	no		csa3,DEDDh,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,csx18,cas1,cas2,RT,cas3,cas5,cas8c,cas7,Cas14c_CAS-V-F,cas14j,c2c9_V-U4,cas4,cas6,csc1gr5,csc2gr7,cas10d,WYL,DinG,c2c10_CAS-V-U3,PD-DExK	Orphan	GGGGGCTAGGGCAGGGAGGGAACA	24	1	16	736918-736948|736918-736948|736918-736948|736918-736948|736918-736948|736918-736948|736918-736948|736918-736948|736918-736948|736918-736948|736918-736948|736918-736948|736918-736948|736918-736948|736918-736948|736918-736948	AP017991.1_195375-195345|AP017991.1_432821-432791|AP017991.1_1324403-1324373|AP017991.1_2536493-2536463|AP017991.1_2632961-2632931|AP017991.1_2739630-2739600|AP017991.1_3601321-3601351|AP017991.1_3739408-3739438|AP017991.1_4015320-4015350|AP017991.1_642591-642621|AP017991.1_1469300-1469270|AP017991.1_2450221-2450251|AP017991.1_3702948-3702978|AP017991.1_4039353-4039323|AP017991.1_4054304-4054274|AP017991.1_4291503-4291533	NA	1	1	Orphan	csa3,DEDDh,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,csx18,cas1,cas2,RT,cas3,cas5,cas8c,cas7,Cas14c_CAS-V-F,cas14j,c2c9_V-U4,cas4,cas6,csc1gr5,csc2gr7,cas10d,WYL,DinG,c2c10_CAS-V-U3,PD-DExK	NA|72aa|up_5|AP017991.1_731412_731628_-,NA|181aa|up_4|AP017991.1_731903_732446_+,NA	NA|151aa|up_9|AP017991.1_726446_726899_+	pfam09655, Nitr_red_assoc, Conserved nitrate reductase-associated protein (Nitr_red_assoc)	NA|393aa|up_8|AP017991.1_727016_728195_+	cd12828, TmCorA-like_1, Thermotoga maritima CorA_like subfamily	NA|570aa|up_7|AP017991.1_728506_730216_+	pfam11832, DUF3352, Protein of unknown function (DUF3352)	NA|326aa|up_6|AP017991.1_730340_731318_-	COG5607, COG5607, Uncharacterized conserved protein [Function unknown]	NA|72aa|up_5|AP017991.1_731412_731628_-	NA	NA|181aa|up_4|AP017991.1_731903_732446_+	NA	NA|225aa|up_3|AP017991.1_732522_733197_+	PLN02811, PLN02811, hydrolase	NA|349aa|up_2|AP017991.1_733389_734436_+	cd13654, PBP2_phosphate_like_2, Substrate binding domain of putative ABC-type phosphate transporter, a member of the type 2 periplasmic binding fold superfamily	NA|383aa|up_1|AP017991.1_734452_735601_+	TIGR00832, Uncharacterized_transporter_slr0944, arsenical-resistance protein	NA|132aa|up_0|AP017991.1_735660_736056_+	TIGR02689, arsenate_reductase, arsenate reductase, glutathione/glutaredoxin type	NA|82aa|down_0|AP017991.1_737217_737463_-	CHL00065, psaC, photosystem I subunit VII	NA|320aa|down_1|AP017991.1_737651_738611_-	COG2048, HdrB, Heterodisulfide reductase, subunit B [Energy production and conversion]	NA|664aa|down_2|AP017991.1_738676_740668_-	COG4178, COG4178, ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]	NA|209aa|down_3|AP017991.1_740859_741486_-	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins	NA|1488aa|down_4|AP017991.1_741584_746048_-	PRK12467, PRK12467, peptide synthase; Provisional	NA|259aa|down_5|AP017991.1_746137_746914_-	PRK05653, fabG, 3-oxoacyl-ACP reductase FabG	NA|1093aa|down_6|AP017991.1_746969_750248_-	PRK12467, PRK12467, peptide synthase; Provisional	NA|315aa|down_7|AP017991.1_750339_751284_-	pfam10364, NKWYS, Putative capsular polysaccharide synthesis protein	NA|267aa|down_8|AP017991.1_751315_752116_-	cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR	NA|209aa|down_9|AP017991.1_752164_752791_-	cd20307, cupin_BacB_N, Bacillus subtilis bacilysin and related proteins, N-terminal cupin domain
GCA_003609755.1_ASM360975v1	AP017991	Planktothrix agardhii NIES-204 DNA, complete genome	4	1225904-1226451	3,4,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas5,cas8c,cas7	csa3,DEDDh,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,csx18,cas1,cas2,RT,cas3,cas5,cas8c,cas7,Cas14c_CAS-V-F,cas14j,c2c9_V-U4,cas4,cas6,csc1gr5,csc2gr7,cas10d,WYL,DinG,c2c10_CAS-V-U3,PD-DExK	Type I-U, Type I-U?,Type I-C	ATAACAATCCTCAGTAATGGGGATTGCGAATTGAAAC,ATAACAATCCTCAGTAATGGGGATTGCGAATTGAAAC,ATAACAATCCTCAGTAATGGGGATTGCGAATTGAAACA	37,37,38	0	0	NA	NA	NA:NA:NA	7,7,7	7	TypeI-U,TypeI-U?,TypeI-C	csa3,DEDDh,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,csx18,cas1,cas2,RT,cas3,cas5,cas8c,cas7,Cas14c_CAS-V-F,cas14j,c2c9_V-U4,cas4,cas6,csc1gr5,csc2gr7,cas10d,WYL,DinG,c2c10_CAS-V-U3,PD-DExK	NA,NA|189aa|down_5|AP017991.1_1234465_1235032_+	NA|474aa|up_9|AP017991.1_1215211_1216633_+	PHA03247, PHA03247, large tegument protein UL36; Provisional	NA|302aa|up_8|AP017991.1_1216687_1217593_+	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism]	NA|90aa|up_7|AP017991.1_1217694_1217964_+	pfam12058, DUF3539, Protein of unknown function (DUF3539)	NA|224aa|up_6|AP017991.1_1217994_1218666_+	COG0325, COG0325, Predicted enzyme with a TIM-barrel fold [General function prediction only]	NA|203aa|up_5|AP017991.1_1218788_1219397_+	COG1799, COG1799, Uncharacterized protein conserved in bacteria [Function unknown]	NA|269aa|up_4|AP017991.1_1219559_1220366_+	PRK11880, PRK11880, pyrroline-5-carboxylate reductase; Reviewed	cas3|660aa|up_3|AP017991.1_1220443_1222423_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas5|223aa|up_2|AP017991.1_1222468_1223137_+	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas8c|565aa|up_1|AP017991.1_1223130_1224825_+	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1)	cas7|282aa|up_0|AP017991.1_1224828_1225674_+	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	NA|503aa|down_0|AP017991.1_1226478_1227987_-	COG2723, BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism]	NA|381aa|down_1|AP017991.1_1228042_1229185_-	cd17507, GT28_Beta-DGS-like, beta-diglucosyldiacylglycerol synthase and similar proteins	NA|437aa|down_2|AP017991.1_1229356_1230667_-	PRK10879, PRK10879, proline aminopeptidase P II; Provisional	NA|628aa|down_3|AP017991.1_1230846_1232730_-	CHL00176, ftsH, cell division protein; Validated	NA|371aa|down_4|AP017991.1_1233170_1234283_+	cd10227, ParM_like, Plasmid segregation protein ParM and similar proteins	NA|189aa|down_5|AP017991.1_1234465_1235032_+	NA	NA|248aa|down_6|AP017991.1_1235099_1235843_-	PRK00173, rph, ribonuclease PH; Reviewed	NA|183aa|down_7|AP017991.1_1235889_1236438_-	cd01428, ADK, Adenylate kinase (ADK) catalyzes the reversible phosphoryl transfer from adenosine triphosphates (ATP) to adenosine monophosphates (AMP) and to yield adenosine diphosphates (ADP)	NA|189aa|down_8|AP017991.1_1236489_1237056_-	cd01286, deoxycytidylate_deaminase, Deoxycytidylate deaminase domain	NA|149aa|down_9|AP017991.1_1237075_1237522_-	PRK00601, dut, dUTP diphosphatase
GCA_003609755.1_ASM360975v1	AP017991	Planktothrix agardhii NIES-204 DNA, complete genome	5	1306740-1306833	5	CRISPRCasFinder	no		csa3,DEDDh,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,csx18,cas1,cas2,RT,cas3,cas5,cas8c,cas7,Cas14c_CAS-V-F,cas14j,c2c9_V-U4,cas4,cas6,csc1gr5,csc2gr7,cas10d,WYL,DinG,c2c10_CAS-V-U3,PD-DExK	Orphan	ACCCCGTTGTTGTGCTTGAGCACCATCTT	29	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,csx18,cas1,cas2,RT,cas3,cas5,cas8c,cas7,Cas14c_CAS-V-F,cas14j,c2c9_V-U4,cas4,cas6,csc1gr5,csc2gr7,cas10d,WYL,DinG,c2c10_CAS-V-U3,PD-DExK	NA|64aa|up_7|AP017991.1_1298617_1298809_+,NA|77aa|up_0|AP017991.1_1305496_1305727_+,NA|52aa|down_0|AP017991.1_1306906_1307062_+,NA|38aa|down_4|AP017991.1_1313671_1313785_-	NA|214aa|up_9|AP017991.1_1297233_1297875_+	pfam02472, ExbD, Biopolymer transport protein ExbD/TolR	NA|211aa|up_8|AP017991.1_1297909_1298542_-	PRK00116, ruvA, Holliday junction branch migration protein RuvA	NA|64aa|up_7|AP017991.1_1298617_1298809_+	NA	NA|413aa|up_6|AP017991.1_1298845_1300084_-	TIGR00275, TIGR00275, flavoprotein, HI0933 family	NA|54aa|up_5|AP017991.1_1300093_1300255_-	pfam00301, Rubredoxin, Rubredoxin	NA|235aa|up_4|AP017991.1_1300349_1301054_+	cd10917, CE4_NodB_like_6s_7s, Catalytic NodB homology domain of rhizobial NodB-like proteins	NA|814aa|up_3|AP017991.1_1301097_1303539_+	NF033203, entero_EhxA, enterohemolysin EhxA	NA|542aa|up_2|AP017991.1_1303554_1305180_+	pfam00395, SLH, S-layer homology domain	NA|97aa|up_1|AP017991.1_1305228_1305519_+	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General    function prediction only]	NA|77aa|up_0|AP017991.1_1305496_1305727_+	NA	NA|52aa|down_0|AP017991.1_1306906_1307062_+	NA	NA|1635aa|down_1|AP017991.1_1307548_1312453_-	COG4995, COG4995, Uncharacterized protein conserved in bacteria [Function unknown]	NA|214aa|down_2|AP017991.1_1312578_1313220_+	PRK14730, coaE, dephospho-CoA kinase; Provisional	NA|117aa|down_3|AP017991.1_1313287_1313638_+	pfam03912, Psb28, Psb28 protein	NA|38aa|down_4|AP017991.1_1313671_1313785_-	NA	NA|149aa|down_5|AP017991.1_1313930_1314377_+	cd17036, T3SC_YbjN-like_1, T110839 is structurally similar to type III secretion system chaperones and YbjN family proteins	NA|606aa|down_6|AP017991.1_1315560_1317378_+	TIGR01243, Cell_division_cycle_protein_48_homolog_MJ1156, AAA family ATPase, CDC48 subfamily	NA|663aa|down_7|AP017991.1_1317656_1319645_+	smart00854, PGA_cap, Bacterial capsule synthesis protein PGA_cap	NA|298aa|down_8|AP017991.1_1319714_1320608_+	cd09025, Aldose_epim_Slr1438, Aldose 1-epimerase, similar to Synechocystis Slr1438	NA|580aa|down_9|AP017991.1_1320842_1322582_-	pfam03235, DUF262, Protein of unknown function DUF262
GCA_003609755.1_ASM360975v1	AP017991	Planktothrix agardhii NIES-204 DNA, complete genome	6	1515135-1517040	4,6,3,5	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas4,cas6,csc1gr5,csc2gr7,cas10d,cas3,WYL	csa3,DEDDh,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,csx18,cas1,cas2,RT,cas3,cas5,cas8c,cas7,Cas14c_CAS-V-F,cas14j,c2c9_V-U4,cas4,cas6,csc1gr5,csc2gr7,cas10d,WYL,DinG,c2c10_CAS-V-U3,PD-DExK	Type I-D	GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG,GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG,GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG,GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	37,37,37,37	0	0	NA	NA	NA:NA:NA:NA	23,25,25,23	25	TypeI-D	csa3,DEDDh,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,csx18,cas1,cas2,RT,cas3,cas5,cas8c,cas7,Cas14c_CAS-V-F,cas14j,c2c9_V-U4,cas4,cas6,csc1gr5,csc2gr7,cas10d,WYL,DinG,c2c10_CAS-V-U3,PD-DExK	NA|75aa|up_4|AP017991.1_1509270_1509495_+,NA|339aa|up_1|AP017991.1_1511976_1512993_-,NA|433aa|up_0|AP017991.1_1513249_1514548_+,NA	NA|917aa|up_9|AP017991.1_1499285_1502036_-	COG1002, COG1002, Type II restriction enzyme, methylase subunits [Defense mechanisms]	NA|1032aa|up_8|AP017991.1_1502552_1505648_+	cd07302, CHD, cyclase homology domain	NA|266aa|up_7|AP017991.1_1505715_1506513_-	pfam11353, DUF3153, Protein of unknown function (DUF3153)	NA|108aa|up_6|AP017991.1_1506802_1507126_+	pfam08855, DUF1825, Domain of unknown function (DUF1825)	NA|605aa|up_5|AP017991.1_1507243_1509058_+	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|75aa|up_4|AP017991.1_1509270_1509495_+	NA	NA|311aa|up_3|AP017991.1_1509556_1510489_+	cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs	NA|456aa|up_2|AP017991.1_1510573_1511941_+	COG1004, Ugd, Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]	NA|339aa|up_1|AP017991.1_1511976_1512993_-	NA	NA|433aa|up_0|AP017991.1_1513249_1514548_+	NA	cas2|99aa|down_0|AP017991.1_1517376_1517673_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|326aa|down_1|AP017991.1_1517669_1518647_-	TIGR04093, hypothetical_protein_L8106_25395, CRISPR-associated endonuclease Cas1, subtype CYANO	cas4|193aa|down_2|AP017991.1_1518653_1519232_-	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas6|274aa|down_3|AP017991.1_1519873_1520695_-	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	csc1gr5|260aa|down_4|AP017991.1_1520669_1521449_-	TIGR03159, cas_Csc1, CRISPR type I-D/CYANO-associated protein Csc1	csc2gr7|345aa|down_5|AP017991.1_1521627_1522662_-	pfam18320, Csc2, Csc2 Crispr	cas10d|990aa|down_6|AP017991.1_1522684_1525654_-	cd09712, Cas10d_I-D, CRISPR/Cas system-associated protein Cas10d	cas3|709aa|down_7|AP017991.1_1525658_1527785_-	cd09710, Cas3_I-D, CRISPR/Cas system-associated protein Cas3; Distinct diverged subfamily of Cas3 helicase domain	WYL|281aa|down_8|AP017991.1_1527875_1528718_+	pfam13280, WYL, WYL domain	NA|207aa|down_9|AP017991.1_1528856_1529477_+	pfam05685, Uma2, Putative restriction endonuclease
GCA_003609755.1_ASM360975v1	AP017991	Planktothrix agardhii NIES-204 DNA, complete genome	7	2227666-2227777	7	CRISPRCasFinder	no		csa3,DEDDh,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,csx18,cas1,cas2,RT,cas3,cas5,cas8c,cas7,Cas14c_CAS-V-F,cas14j,c2c9_V-U4,cas4,cas6,csc1gr5,csc2gr7,cas10d,WYL,DinG,c2c10_CAS-V-U3,PD-DExK	Orphan	CGGGTTTTGTCTGTGTAGACGCGATTTCAAT	31	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,csx18,cas1,cas2,RT,cas3,cas5,cas8c,cas7,Cas14c_CAS-V-F,cas14j,c2c9_V-U4,cas4,cas6,csc1gr5,csc2gr7,cas10d,WYL,DinG,c2c10_CAS-V-U3,PD-DExK	NA|138aa|up_9|AP017991.1_2216792_2217206_+,NA|52aa|up_8|AP017991.1_2217258_2217414_+,NA|299aa|up_7|AP017991.1_2217556_2218453_-,NA|96aa|up_2|AP017991.1_2226084_2226372_+,NA|74aa|up_0|AP017991.1_2227420_2227642_+,NA|121aa|down_2|AP017991.1_2233473_2233836_+	NA|138aa|up_9|AP017991.1_2216792_2217206_+	NA	NA|52aa|up_8|AP017991.1_2217258_2217414_+	NA	NA|299aa|up_7|AP017991.1_2217556_2218453_-	NA	NA|1145aa|up_6|AP017991.1_2218596_2222031_-	pfam03924, CHASE, CHASE domain	NA|542aa|up_5|AP017991.1_2222243_2223869_-	TIGR03156, GTP_HflX, GTP-binding protein HflX	NA|340aa|up_4|AP017991.1_2224168_2225188_-	COG4608, AppF, ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism]	NA|150aa|up_3|AP017991.1_2225411_2225861_-	pfam01797, Y1_Tnp, Transposase IS200 like	NA|96aa|up_2|AP017991.1_2226084_2226372_+	NA	NA|299aa|up_1|AP017991.1_2226581_2227478_+	pfam12770, CHAT, CHAT domain	NA|74aa|up_0|AP017991.1_2227420_2227642_+	NA	NA|86aa|down_0|AP017991.1_2228665_2228923_-	cd18702, PIN_VapC_like, uncharacterized subfamily of the VapC (virulence-associated protein C)-like family of the PIN domain superfamily	NA|1328aa|down_1|AP017991.1_2229030_2233014_-	PRK12493, PRK12493, magnesium chelatase subunit H; Provisional	NA|121aa|down_2|AP017991.1_2233473_2233836_+	NA	NA|470aa|down_3|AP017991.1_2233969_2235379_-	CHL00177, ccs1, c-type cytochrome biogenensis protein; Validated	NA|246aa|down_4|AP017991.1_2235400_2236138_-	pfam02683, DsbD, Cytochrome C biogenesis protein transmembrane region	NA|228aa|down_5|AP017991.1_2236202_2236886_-	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown]	NA|169aa|down_6|AP017991.1_2237134_2237641_+	cd08919, PBP-like, Phycobiliproteins (PBPs) and related proteins	NA|266aa|down_7|AP017991.1_2237775_2238573_+	pfam00427, PBS_linker_poly, Phycobilisome Linker polypeptide	NA|121aa|down_8|AP017991.1_2238653_2239016_+	cd07245, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|432aa|down_9|AP017991.1_2239012_2240308_+	COG1961, PinR, Site-specific recombinases, DNA invertase Pin homologs [DNA replication, recombination, and repair]
GCA_003609755.1_ASM360975v1	AP017991	Planktothrix agardhii NIES-204 DNA, complete genome	10	3006313-3006433	10	CRISPRCasFinder	no		csa3,DEDDh,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,csx18,cas1,cas2,RT,cas3,cas5,cas8c,cas7,Cas14c_CAS-V-F,cas14j,c2c9_V-U4,cas4,cas6,csc1gr5,csc2gr7,cas10d,WYL,DinG,c2c10_CAS-V-U3,PD-DExK	Orphan	TCAGAAACCGGGTTTCTCAAAATATCTTGATTTGT	35	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,csx18,cas1,cas2,RT,cas3,cas5,cas8c,cas7,Cas14c_CAS-V-F,cas14j,c2c9_V-U4,cas4,cas6,csc1gr5,csc2gr7,cas10d,WYL,DinG,c2c10_CAS-V-U3,PD-DExK	NA|71aa|up_3|AP017991.1_3004855_3005068_-,NA|120aa|up_1|AP017991.1_3005532_3005892_+,NA|51aa|up_0|AP017991.1_3006004_3006157_+,NA|120aa|down_3|AP017991.1_3009423_3009783_+,NA|232aa|down_9|AP017991.1_3015004_3015700_-	NA|390aa|up_9|AP017991.1_2996830_2998000_-	COG3551, COG3551, Uncharacterized protein conserved in bacteria [Function unknown]	NA|362aa|up_8|AP017991.1_2998054_2999140_-	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|530aa|up_7|AP017991.1_2999301_3000891_+	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|290aa|up_6|AP017991.1_3001344_3002214_+	PRK05481, PRK05481, lipoyl synthase; Provisional	NA|599aa|up_5|AP017991.1_3002339_3004136_+	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment	NA|129aa|up_4|AP017991.1_3004472_3004859_-	cd09872, PIN_Sll0205-like, VapC-like PIN domain of Sll0205 protein and homologs	NA|71aa|up_3|AP017991.1_3004855_3005068_-	NA	NA|110aa|up_2|AP017991.1_3005216_3005546_+	TIGR02683, Uncharacterized_protein_HI_1419, putative addiction module killer protein	NA|120aa|up_1|AP017991.1_3005532_3005892_+	NA	NA|51aa|up_0|AP017991.1_3006004_3006157_+	NA	NA|307aa|down_0|AP017991.1_3006714_3007635_+	PRK00971, PRK00971, glutaminase; Provisional	NA|303aa|down_1|AP017991.1_3007810_3008719_+	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown]	NA|108aa|down_2|AP017991.1_3008746_3009070_+	pfam03091, CutA1, CutA1 divalent ion tolerance protein	NA|120aa|down_3|AP017991.1_3009423_3009783_+	NA	NA|140aa|down_4|AP017991.1_3009779_3010199_+	pfam01844, HNH, HNH endonuclease	NA|1002aa|down_5|AP017991.1_3010466_3013472_-	cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA	NA|102aa|down_6|AP017991.1_3013650_3013956_-	pfam13744, HTH_37, Helix-turn-helix domain	NA|136aa|down_7|AP017991.1_3014068_3014476_-	pfam01337, Barstar, Barstar (barnase inhibitor)	NA|135aa|down_8|AP017991.1_3014472_3014877_-	cd00607, RNase_Sa, RNase_Sa	NA|232aa|down_9|AP017991.1_3015004_3015700_-	NA
GCA_003609755.1_ASM360975v1	AP017991	Planktothrix agardhii NIES-204 DNA, complete genome	11	3018142-3018252	11	CRISPRCasFinder	no		csa3,DEDDh,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,csx18,cas1,cas2,RT,cas3,cas5,cas8c,cas7,Cas14c_CAS-V-F,cas14j,c2c9_V-U4,cas4,cas6,csc1gr5,csc2gr7,cas10d,WYL,DinG,c2c10_CAS-V-U3,PD-DExK	Orphan	GTTTCCGTCCCCTTGCGGGGAAAAGATAGAAAACTAC	37	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,csx18,cas1,cas2,RT,cas3,cas5,cas8c,cas7,Cas14c_CAS-V-F,cas14j,c2c9_V-U4,cas4,cas6,csc1gr5,csc2gr7,cas10d,WYL,DinG,c2c10_CAS-V-U3,PD-DExK	NA|120aa|up_9|AP017991.1_3009423_3009783_+,NA|232aa|up_3|AP017991.1_3015004_3015700_-,NA|173aa|up_1|AP017991.1_3017228_3017747_-,NA|75aa|up_0|AP017991.1_3017891_3018116_-,NA|60aa|down_3|AP017991.1_3020695_3020875_-	NA|120aa|up_9|AP017991.1_3009423_3009783_+	NA	NA|140aa|up_8|AP017991.1_3009779_3010199_+	pfam01844, HNH, HNH endonuclease	NA|1002aa|up_7|AP017991.1_3010466_3013472_-	cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA	NA|102aa|up_6|AP017991.1_3013650_3013956_-	pfam13744, HTH_37, Helix-turn-helix domain	NA|136aa|up_5|AP017991.1_3014068_3014476_-	pfam01337, Barstar, Barstar (barnase inhibitor)	NA|135aa|up_4|AP017991.1_3014472_3014877_-	cd00607, RNase_Sa, RNase_Sa	NA|232aa|up_3|AP017991.1_3015004_3015700_-	NA	NA|411aa|up_2|AP017991.1_3015897_3017130_+	COG2886, COG2886, Uncharacterized small protein [Function unknown]	NA|173aa|up_1|AP017991.1_3017228_3017747_-	NA	NA|75aa|up_0|AP017991.1_3017891_3018116_-	NA	NA|89aa|down_0|AP017991.1_3018851_3019118_+	PLN02468, PLN02468, putative pectinesterase/pectinesterase inhibitor	NA|82aa|down_1|AP017991.1_3019124_3019370_+	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,	NA|297aa|down_2|AP017991.1_3019628_3020519_+	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]	NA|60aa|down_3|AP017991.1_3020695_3020875_-	NA	NA|428aa|down_4|AP017991.1_3021296_3022580_-	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family	NA|145aa|down_5|AP017991.1_3022753_3023188_-	COG0071, IbpA, Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones]	NA|621aa|down_6|AP017991.1_3023533_3025396_+	cd00400, Voltage_gated_ClC, CLC voltage-gated chloride channel	NA|426aa|down_7|AP017991.1_3025478_3026756_-	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional	NA|449aa|down_8|AP017991.1_3026898_3028245_-	PRK00861, PRK00861, putative lipid kinase; Reviewed	NA|378aa|down_9|AP017991.1_3028284_3029418_-	PRK00080, ruvB, Holliday junction branch migration DNA helicase RuvB
GCA_003609755.1_ASM360975v1	AP017991	Planktothrix agardhii NIES-204 DNA, complete genome	13	3648276-3648388	13	CRISPRCasFinder	no		csa3,DEDDh,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,csx18,cas1,cas2,RT,cas3,cas5,cas8c,cas7,Cas14c_CAS-V-F,cas14j,c2c9_V-U4,cas4,cas6,csc1gr5,csc2gr7,cas10d,WYL,DinG,c2c10_CAS-V-U3,PD-DExK	Orphan	AATAATAGAGATTAGCAACGGTTAAATCAGAAACTT	36	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,csx18,cas1,cas2,RT,cas3,cas5,cas8c,cas7,Cas14c_CAS-V-F,cas14j,c2c9_V-U4,cas4,cas6,csc1gr5,csc2gr7,cas10d,WYL,DinG,c2c10_CAS-V-U3,PD-DExK	NA|122aa|up_8|AP017991.1_3640175_3640541_+,NA|339aa|down_0|AP017991.1_3649648_3650665_+	NA|528aa|up_9|AP017991.1_3638424_3640008_+	pfam18105, PGM1_C, PGM1 C-terminal domain	NA|122aa|up_8|AP017991.1_3640175_3640541_+	NA	NA|145aa|up_7|AP017991.1_3640546_3640981_+	cd09881, PIN_VapC4-5_FitB-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC4 and VapC5, and Neisseria gonorrhoeae FitB and related proteins	NA|230aa|up_6|AP017991.1_3641022_3641712_-	pfam06282, DUF1036, Protein of unknown function (DUF1036)	NA|359aa|up_5|AP017991.1_3641725_3642802_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|492aa|up_4|AP017991.1_3642805_3644281_-	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms]	NA|229aa|up_3|AP017991.1_3644420_3645107_-	cd00198, vWFA, Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF)	NA|169aa|up_2|AP017991.1_3645402_3645909_+	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon	NA|647aa|up_1|AP017991.1_3646045_3647986_+	PRK05667, dnaG, DNA primase; Validated	NA|76aa|up_0|AP017991.1_3647969_3648197_+	pfam03948, Ribosomal_L9_C, Ribosomal protein L9, C-terminal domain	NA|339aa|down_0|AP017991.1_3649648_3650665_+	NA	NA|434aa|down_1|AP017991.1_3650714_3652016_-	PRK14224, PRK14224, fluoride efflux transporter CrcB	NA|311aa|down_2|AP017991.1_3652024_3652957_-	PRK01212, PRK01212, homoserine kinase; Provisional	NA|123aa|down_3|AP017991.1_3653188_3653557_+	cd00038, CAP_ED, effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO sensor	NA|385aa|down_4|AP017991.1_3653559_3654714_-	PRK14071, PRK14071, ATP-dependent 6-phosphofructokinase	NA|341aa|down_5|AP017991.1_3655055_3656078_+	COG0057, GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism]	NA|1152aa|down_6|AP017991.1_3656172_3659628_-	pfam12770, CHAT, CHAT domain	NA|1072aa|down_7|AP017991.1_3660162_3663378_-	pfam12770, CHAT, CHAT domain	NA|1032aa|down_8|AP017991.1_3663912_3667008_-	pfam12770, CHAT, CHAT domain	NA|167aa|down_9|AP017991.1_3667433_3667934_-	pfam02259, FAT, FAT domain
GCA_003609755.1_ASM360975v1	AP017991	Planktothrix agardhii NIES-204 DNA, complete genome	14	3741287-3741626	6,14,4	PILER-CR,CRISPRCasFinder,CRT	no	Cas14c_CAS-V-F	csa3,DEDDh,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,csx18,cas1,cas2,RT,cas3,cas5,cas8c,cas7,Cas14c_CAS-V-F,cas14j,c2c9_V-U4,cas4,cas6,csc1gr5,csc2gr7,cas10d,WYL,DinG,c2c10_CAS-V-U3,PD-DExK	Unclear	GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG,GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAGT,GTTTCAGTCCCGCAAGCAGGATTATTTTAATTGAAAG	37,38,37	0	0	NA	NA	NA:NA:NA	4,4,4	4	TypeV	csa3,DEDDh,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,csx18,cas1,cas2,RT,cas3,cas5,cas8c,cas7,Cas14c_CAS-V-F,cas14j,c2c9_V-U4,cas4,cas6,csc1gr5,csc2gr7,cas10d,WYL,DinG,c2c10_CAS-V-U3,PD-DExK	NA|68aa|up_6|AP017991.1_3733883_3734087_-,NA|398aa|up_2|AP017991.1_3736856_3738050_-,NA	NA|72aa|up_9|AP017991.1_3730997_3731213_+	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed	NA|583aa|up_8|AP017991.1_3731340_3733089_-	pfam02254, TrkA_N, TrkA-N domain	NA|190aa|up_7|AP017991.1_3733220_3733790_-	pfam05685, Uma2, Putative restriction endonuclease	NA|68aa|up_6|AP017991.1_3733883_3734087_-	NA	NA|141aa|up_5|AP017991.1_3734208_3734631_+	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	Cas14c_CAS-V-F|224aa|up_4|AP017991.1_3734596_3735268_+	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|474aa|up_3|AP017991.1_3735296_3736718_+	PRK09287, PRK09287, NADP-dependent phosphogluconate dehydrogenase	NA|398aa|up_2|AP017991.1_3736856_3738050_-	NA	NA|415aa|up_1|AP017991.1_3738053_3739298_-	TIGR00911, High-affinity_methionine_permease, L-type amino acid transporter	NA|458aa|up_0|AP017991.1_3739671_3741045_-	PRK02705, murD, UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase	NA|718aa|down_0|AP017991.1_3741894_3744048_-	PRK01233, glyS, glycyl-tRNA synthetase subunit beta; Validated	NA|227aa|down_1|AP017991.1_3744200_3744881_-	COG4636, Uma2, Endonuclease, Uma2 family (restriction endonuclease fold) [General function prediction only]	NA|234aa|down_2|AP017991.1_3745013_3745715_-	COG4636, Uma2, Endonuclease, Uma2 family (restriction endonuclease fold) [General function prediction only]	NA|450aa|down_3|AP017991.1_3745763_3747113_-	smart00563, PlsC, Phosphate acyltransferases	NA|211aa|down_4|AP017991.1_3747451_3748084_+	pfam14025, DUF4241, Protein of unknown function (DUF4241)	NA|186aa|down_5|AP017991.1_3748064_3748622_-	COG1225, Bcp, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]	NA|198aa|down_6|AP017991.1_3748733_3749327_-	cd03015, PRX_Typ2cys, Peroxiredoxin (PRX) family, Typical 2-Cys PRX subfamily; PRXs are thiol-specific antioxidant (TSA) proteins, which confer a protective role in cells through its peroxidase activity by reducing hydrogen peroxide, peroxynitrite, and organic hydroperoxides	NA|705aa|down_7|AP017991.1_3749916_3752031_-	pfam01551, Peptidase_M23, Peptidase family M23	NA|154aa|down_8|AP017991.1_3752614_3753076_-	cd18094, SpoU-like_TrmL, SAM-dependent tRNA methylase related to TrmL	NA|384aa|down_9|AP017991.1_3753211_3754363_-	TIGR02048, gshA_cyano, glutamate--cysteine ligase, cyanobacterial, putative
GCA_003609755.1_ASM360975v1	AP017991	Planktothrix agardhii NIES-204 DNA, complete genome	15	4670072-4670163	15	CRISPRCasFinder	no		csa3,DEDDh,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,csx18,cas1,cas2,RT,cas3,cas5,cas8c,cas7,Cas14c_CAS-V-F,cas14j,c2c9_V-U4,cas4,cas6,csc1gr5,csc2gr7,cas10d,WYL,DinG,c2c10_CAS-V-U3,PD-DExK	Orphan	TTCGTTGTTGCGCTTCAGCGCAA	23	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,csx18,cas1,cas2,RT,cas3,cas5,cas8c,cas7,Cas14c_CAS-V-F,cas14j,c2c9_V-U4,cas4,cas6,csc1gr5,csc2gr7,cas10d,WYL,DinG,c2c10_CAS-V-U3,PD-DExK	NA|230aa|up_9|AP017991.1_4662220_4662910_+,NA|138aa|up_8|AP017991.1_4663088_4663502_-,NA|82aa|up_7|AP017991.1_4663775_4664021_+,NA|69aa|up_6|AP017991.1_4664082_4664289_+,NA|126aa|up_2|AP017991.1_4667831_4668209_-,NA|37aa|up_1|AP017991.1_4668292_4668403_-,NA|73aa|down_6|AP017991.1_4683915_4684134_-,NA|130aa|down_7|AP017991.1_4684273_4684663_-	NA|230aa|up_9|AP017991.1_4662220_4662910_+	NA	NA|138aa|up_8|AP017991.1_4663088_4663502_-	NA	NA|82aa|up_7|AP017991.1_4663775_4664021_+	NA	NA|69aa|up_6|AP017991.1_4664082_4664289_+	NA	NA|267aa|up_5|AP017991.1_4664413_4665214_-	pfam08241, Methyltransf_11, Methyltransferase domain	NA|314aa|up_4|AP017991.1_4665614_4666556_+	PLN02823, PLN02823, spermine synthase	NA|199aa|up_3|AP017991.1_4666897_4667494_+	pfam01551, Peptidase_M23, Peptidase family M23	NA|126aa|up_2|AP017991.1_4667831_4668209_-	NA	NA|37aa|up_1|AP017991.1_4668292_4668403_-	NA	NA|490aa|up_0|AP017991.1_4668596_4670066_+	pfam08547, CIA30, Complex I intermediate-associated protein 30 (CIA30)	NA|296aa|down_0|AP017991.1_4670217_4671105_+	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|848aa|down_1|AP017991.1_4671916_4674460_+	PRK06464, PRK06464, phosphoenolpyruvate synthase; Validated	NA|268aa|down_2|AP017991.1_4674590_4675394_-	pfam13707, RloB, RloB-like protein	NA|468aa|down_3|AP017991.1_4675405_4676809_-	pfam13304, AAA_21, AAA domain, putative AbiEii toxin, Type IV TA system	NA|2061aa|down_4|AP017991.1_4677122_4683305_+	pfam04357, TamB, TamB, inner membrane protein subunit of TAM complex	NA|169aa|down_5|AP017991.1_4683301_4683808_-	pfam13671, AAA_33, AAA domain	NA|73aa|down_6|AP017991.1_4683915_4684134_-	NA	NA|130aa|down_7|AP017991.1_4684273_4684663_-	NA	NA|238aa|down_8|AP017991.1_4684711_4685425_-	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA	NA|577aa|down_9|AP017991.1_4685461_4687192_-	COG1511, COG1511, Predicted membrane protein [Function unknown]
GCA_003609755.1_ASM360975v1	AP017992	Planktothrix agardhii NIES-204 plasmid plasmid1 DNA, complete sequence	1	6704-7190	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	c2c9_V-U4,cmr5gr11,csx1,WYL,cas1	c2c9_V-U4,cmr5gr11,csx1,WYL,cas1	Type III-B	GTTTCCATTAATTCGTCACCCCAATAAAAGGGCGAC,GTTTCCATTAATTCGTCACCCCAATAAAAGGGCGAC,GTTTCCATTAATTCGTCACCCCAATAAAAGGGCGAC	36,36,36	0	0	NA	NA	NA:NA:NA	6,6,6	6	TypeIII-B	csa3,DEDDh,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,csx18,cas1,cas2,RT,cas3,cas5,cas8c,cas7,Cas14c_CAS-V-F,cas14j,c2c9_V-U4,cas4,cas6,csc1gr5,csc2gr7,cas10d,WYL,DinG,c2c10_CAS-V-U3,PD-DExK	cmr5gr11|108aa|up_3|AP017992.1_2738_3062_+,csx1|170aa|up_1|AP017992.1_4972_5482_+,NA|64aa|down_0|AP017992.1_7381_7573_-,NA|151aa|down_2|AP017992.1_10174_10627_+,NA|409aa|down_3|AP017992.1_10858_12085_+,NA|259aa|down_4|AP017992.1_12158_12935_+,NA|882aa|down_8|AP017992.1_15314_17960_-,NA|454aa|down_9|AP017992.1_18010_19372_-	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	c2c9_V-U4|409aa|up_5|AP017992.1_76_1303_-	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|338aa|up_4|AP017992.1_1521_2535_+	pfam13546, DDE_5, DDE superfamily endonuclease	cmr5gr11|108aa|up_3|AP017992.1_2738_3062_+	NA	NA|577aa|up_2|AP017992.1_3048_4779_+	COG1337, COG1337, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	csx1|170aa|up_1|AP017992.1_4972_5482_+	NA	NA|383aa|up_0|AP017992.1_5521_6670_+	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|64aa|down_0|AP017992.1_7381_7573_-	NA	WYL|704aa|down_1|AP017992.1_7886_9998_+	pfam13671, AAA_33, AAA domain	NA|151aa|down_2|AP017992.1_10174_10627_+	NA	NA|409aa|down_3|AP017992.1_10858_12085_+	NA	NA|259aa|down_4|AP017992.1_12158_12935_+	NA	NA|150aa|down_5|AP017992.1_12979_13429_+	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown]	cas1|141aa|down_6|AP017992.1_13519_13942_-	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	cas1|153aa|down_7|AP017992.1_14664_15123_-	TIGR00287, CRISPR-associated_endonuclease_Cas1, CRISPR-associated endonuclease Cas1	NA|882aa|down_8|AP017992.1_15314_17960_-	NA	NA|454aa|down_9|AP017992.1_18010_19372_-	NA
GCA_003609755.1_ASM360975v1	AP017992	Planktothrix agardhii NIES-204 plasmid plasmid1 DNA, complete sequence	2	14209-14456	2,2,2	CRT,PILER-CR,CRISPRCasFinder	no	c2c9_V-U4,cmr5gr11,csx1,WYL,cas1	c2c9_V-U4,cmr5gr11,csx1,WYL,cas1	Type III-B	GTTTCCATTAATACGACTAATTTCTTAGTCTAAAG,GTTTCCATTAATACGACTAATTTCTTAGTCTAAAGTATT,TTTCCATTAATACGACTAATTTCTTAGTCTAAA	35,39,33	0	0	NA	NA	NA:NA:NA	3,3,3	3	TypeIII-B	csa3,DEDDh,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,csx18,cas1,cas2,RT,cas3,cas5,cas8c,cas7,Cas14c_CAS-V-F,cas14j,c2c9_V-U4,cas4,cas6,csc1gr5,csc2gr7,cas10d,WYL,DinG,c2c10_CAS-V-U3,PD-DExK	csx1|170aa|up_8|AP017992.1_4972_5482_+,NA|64aa|up_6|AP017992.1_7381_7573_-,NA|151aa|up_4|AP017992.1_10174_10627_+,NA|409aa|up_3|AP017992.1_10858_12085_+,NA|259aa|up_2|AP017992.1_12158_12935_+,NA|882aa|down_1|AP017992.1_15314_17960_-,NA|454aa|down_2|AP017992.1_18010_19372_-,NA|1064aa|down_8|AP017992.1_27267_30459_+	NA|577aa|up_9|AP017992.1_3048_4779_+	COG1337, COG1337, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	csx1|170aa|up_8|AP017992.1_4972_5482_+	NA	NA|383aa|up_7|AP017992.1_5521_6670_+	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|64aa|up_6|AP017992.1_7381_7573_-	NA	WYL|704aa|up_5|AP017992.1_7886_9998_+	pfam13671, AAA_33, AAA domain	NA|151aa|up_4|AP017992.1_10174_10627_+	NA	NA|409aa|up_3|AP017992.1_10858_12085_+	NA	NA|259aa|up_2|AP017992.1_12158_12935_+	NA	NA|150aa|up_1|AP017992.1_12979_13429_+	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown]	cas1|141aa|up_0|AP017992.1_13519_13942_-	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	cas1|153aa|down_0|AP017992.1_14664_15123_-	TIGR00287, CRISPR-associated_endonuclease_Cas1, CRISPR-associated endonuclease Cas1	NA|882aa|down_1|AP017992.1_15314_17960_-	NA	NA|454aa|down_2|AP017992.1_18010_19372_-	NA	NA|338aa|down_3|AP017992.1_19900_20914_-	pfam13546, DDE_5, DDE superfamily endonuclease	NA|218aa|down_4|AP017992.1_21342_21996_+	PHA02518, PHA02518, ParA-like protein; Provisional	NA|105aa|down_5|AP017992.1_21992_22307_+	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|1123aa|down_6|AP017992.1_22303_25672_-	pfam12965, DUF3854, Domain of unknown function (DUF3854)	NA|333aa|down_7|AP017992.1_26177_27176_+	cd01195, INT_C_like_5, Uncharacterized site-specific tyrosine recombinase, C-terminal catalytic domain	NA|1064aa|down_8|AP017992.1_27267_30459_+	NA	NA|1141aa|down_9|AP017992.1_30551_33974_-	TIGR01391, DNA_primase, DNA primase, catalytic core
