assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003571765.1_ASM357176v1	CP032237	Escherichia coli strain ECCWS199 chromosome, complete genome	1	991136-991835	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3	c2c9_V-U4,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	Unclear	GTGTTCCCCGCGCCAGCGGGGATAAACC,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	28,29,29	0	0	NA	NA	I-E:I-E:I-E	11,11,11	11	Unclear	c2c9_V-U4,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,RT	NA,NA	NA|447aa|up_9|CP032237.1_974794_976135_+	TIGR03247, glucar-dehydr, glucarate dehydratase	NA|919aa|up_8|CP032237.1_977727_980484_-	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional	NA|434aa|up_7|CP032237.1_980540_981842_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|745aa|up_6|CP032237.1_981889_984124_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|83aa|up_5|CP032237.1_984201_984450_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_4|CP032237.1_984449_984785_+	PRK09907, PRK09907, endoribonuclease MazF	NA|546aa|up_3|CP032237.1_985873_987511_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_2|CP032237.1_987598_988897_+	PRK00077, eno, enolase; Provisional	NA|291aa|up_1|CP032237.1_988956_989829_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|224aa|up_0|CP032237.1_990122_990794_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|CP032237.1_992473_993952_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|426aa|down_1|CP032237.1_993978_995256_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_2|CP032237.1_995575_996361_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_3|CP032237.1_996430_997885_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|446aa|down_4|CP032237.1_997978_999316_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_5|CP032237.1_999293_1000073_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|287aa|down_6|CP032237.1_1000069_1000930_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|192aa|down_7|CP032237.1_1001077_1001653_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_8|CP032237.1_1001669_1001930_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|down_9|CP032237.1_1001920_1003192_-	PRK10015, PRK10015, oxidoreductase; Provisional
GCA_003571765.1_ASM357176v1	CP032237	Escherichia coli strain ECCWS199 chromosome, complete genome	2	1017385-1018572	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	c2c9_V-U4,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	Type I-E	GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	17,19,19	19	TypeI-E	c2c9_V-U4,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,RT	NA,NA	NA|571aa|up_9|CP032237.1_1005749_1007462_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|up_8|CP032237.1_1007535_1008270_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	cas3|889aa|up_7|CP032237.1_1008628_1011295_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|451aa|up_6|CP032237.1_1011709_1013062_+	PRK09693, PRK09693, Cascade antiviral complex protein; Validated	cse2gr11|161aa|up_5|CP032237.1_1013210_1013693_+	cd09670, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|364aa|up_4|CP032237.1_1013705_1014797_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|225aa|up_3|CP032237.1_1014799_1015474_+	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas6e|200aa|up_2|CP032237.1_1015460_1016060_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|306aa|up_1|CP032237.1_1016075_1016993_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|95aa|up_0|CP032237.1_1016994_1017279_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|CP032237.1_1018592_1019630_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|CP032237.1_1019881_1020790_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|CP032237.1_1020791_1022219_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|CP032237.1_1022218_1022824_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|CP032237.1_1022873_1023197_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|CP032237.1_1023390_1023702_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|CP032237.1_1023720_1024431_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|CP032237.1_1024430_1024910_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|CP032237.1_1024906_1025956_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|CP032237.1_1025936_1026698_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCA_003571765.1_ASM357176v1	CP032237	Escherichia coli strain ECCWS199 chromosome, complete genome	3	1768338-1768482	3	CRISPRCasFinder	no		c2c9_V-U4,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	Orphan	GATAAGACGCGTCAGCGTCGCATCAGGCACTGAATGCCGGATGCGGCGT	49	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,RT	NA,NA	NA|249aa|up_9|CP032237.1_1757188_1757935_+	PRK10063, PRK10063, colanic acid biosynthesis glycosyltransferase WcaE	NA|183aa|up_8|CP032237.1_1757950_1758499_+	TIGR04008, WcaF, colanic acid biosynthesis acetyltransferase WcaF	NA|374aa|up_7|CP032237.1_1758524_1759646_+	COG1089, Gmd, GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]	NA|322aa|up_6|CP032237.1_1759648_1760614_+	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs	NA|160aa|up_5|CP032237.1_1760616_1761096_+	PRK15434, PRK15434, GDP-mannose mannosyl hydrolase	NA|408aa|up_4|CP032237.1_1761092_1762316_+	TIGR04007, wcaI, colanic acid biosynthesis glycosyl transferase WcaI	NA|479aa|up_3|CP032237.1_1762318_1763755_+	PRK15460, cpsB, mannose-1-phosphate guanyltransferase; Provisional	NA|457aa|up_2|CP032237.1_1763947_1765318_+	PRK15414, PRK15414, phosphomannomutase	NA|465aa|up_1|CP032237.1_1765372_1766767_+	PRK10124, PRK10124, putative UDP-glucose lipid carrier transferase; Provisional	NA|493aa|up_0|CP032237.1_1766768_1768247_+	PRK10459, PRK10459, MOP flippase family protein	NA|427aa|down_0|CP032237.1_1768619_1769900_+	TIGR04006, wcaK, colanic acid biosynthesis pyruvyl transferase WcaK	NA|407aa|down_1|CP032237.1_1769896_1771117_+	TIGR04005, wcaL, colanic acid biosynthesis glycosyltransferase WcaL	NA|332aa|down_2|CP032237.1_1772678_1773674_+	cd05238, Gne_like_SDR_e, Escherichia coli Gne (a nucleoside-diphosphate-sugar 4-epimerase)-like, extended (e) SDRs	NA|298aa|down_3|CP032237.1_1773916_1774810_+	PRK10122, PRK10122, UTP--glucose-1-phosphate uridylyltransferase GalF	NA|340aa|down_4|CP032237.1_1775119_1776139_+	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs	NA|339aa|down_5|CP032237.1_1776157_1777174_+	cd03808, GT4_CapM-like, capsular polysaccharide biosynthesis glycosyltransferase CapM and similar proteins	NA|374aa|down_6|CP032237.1_1777200_1778322_+	COG1089, Gmd, GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]	NA|322aa|down_7|CP032237.1_1778324_1779290_+	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs	NA|167aa|down_8|CP032237.1_1779292_1779793_+	PRK15434, PRK15434, GDP-mannose mannosyl hydrolase	NA|483aa|down_9|CP032237.1_1779785_1781234_+	TIGR01479, Mannose-1-phosphate_guanylyltransferase, mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
GCA_003571765.1_ASM357176v1	CP032237	Escherichia coli strain ECCWS199 chromosome, complete genome	4	2217134-2217257	4	CRISPRCasFinder	no	DEDDh	c2c9_V-U4,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,RT	NA,NA|75aa|down_7|CP032237.1_2225842_2226067_-,NA|30aa|down_8|CP032237.1_2226153_2226243_+	NA|70aa|up_9|CP032237.1_2207219_2207429_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_8|CP032237.1_2207883_2208510_+	PRK09898, PRK09898, ferredoxin-like protein	NA|633aa|up_7|CP032237.1_2208446_2210345_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|403aa|up_6|CP032237.1_2210354_2211563_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|216aa|up_5|CP032237.1_2211974_2212622_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_4|CP032237.1_2212685_2213354_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_3|CP032237.1_2213350_2214136_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_2|CP032237.1_2214139_2214952_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_1|CP032237.1_2214963_2216568_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|CP032237.1_2216693_2216999_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|CP032237.1_2217571_2218828_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|CP032237.1_2218868_2220242_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|CP032237.1_2220456_2221098_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|CP032237.1_2221137_2222286_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|CP032237.1_2222576_2223788_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|CP032237.1_2223900_2224833_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|CP032237.1_2224829_2225855_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|75aa|down_7|CP032237.1_2225842_2226067_-	NA	NA|30aa|down_8|CP032237.1_2226153_2226243_+	NA	NA|390aa|down_9|CP032237.1_2226408_2227578_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]
GCA_003571765.1_ASM357176v1	CP032237	Escherichia coli strain ECCWS199 chromosome, complete genome	6	2961725-2961845	6	CRISPRCasFinder	no		c2c9_V-U4,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	Orphan	AAAATCACCATCATACACTAAATCAGTAAGTTGGCAGCAT	40	1	1	2961765-2961805	CP032237.1_1870761-1870721	NA	1	1	Orphan	c2c9_V-U4,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,RT	NA|79aa|up_4|CP032237.1_2957969_2958206_-,NA	NA|267aa|up_9|CP032237.1_2954352_2955153_+	TIGR03611, RutD, pyrimidine utilization protein D	NA|197aa|up_8|CP032237.1_2955162_2955753_+	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional	NA|165aa|up_7|CP032237.1_2955763_2956258_+	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F	NA|443aa|up_6|CP032237.1_2956278_2957607_+	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G	NA|58aa|up_5|CP032237.1_2957863_2958037_-	COG3729, GsiB, General stress protein [General function prediction only]	NA|79aa|up_4|CP032237.1_2957969_2958206_-	NA	NA|199aa|up_3|CP032237.1_2958409_2959006_+	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional	NA|76aa|up_2|CP032237.1_2959026_2959254_+	PRK10174, PRK10174, hypothetical protein; Provisional	NA|414aa|up_1|CP032237.1_2959291_2960533_-	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional	NA|63aa|up_0|CP032237.1_2960825_2961014_-	PRK09784, PRK09784, YccE family protein	NA|307aa|down_0|CP032237.1_2962125_2963046_+	PRK10266, PRK10266, curved DNA-binding protein	NA|102aa|down_1|CP032237.1_2963045_2963351_+	PRK10265, PRK10265, chaperone modulator CbpM	NA|200aa|down_2|CP032237.1_2963502_2964102_-	PRK04976, torD, chaperone protein TorD; Validated	NA|849aa|down_3|CP032237.1_2964098_2966645_-	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA	NA|391aa|down_4|CP032237.1_2966644_2967817_-	PRK15032, PRK15032, pentaheme c-type cytochrome TorC	NA|231aa|down_5|CP032237.1_2967946_2968639_+	PRK10766, PRK10766, two-component system response regulator TorR	NA|343aa|down_6|CP032237.1_2968611_2969640_-	PRK10936, PRK10936, TMAO reductase system periplasmic protein TorT; Provisional	NA|915aa|down_7|CP032237.1_2969722_2972467_+	PRK11466, PRK11466, hybrid sensory histidine kinase TorS; Provisional	NA|358aa|down_8|CP032237.1_2972538_2973612_+	COG0348, NapH, Polyferredoxin [Energy production and conversion]	NA|58aa|down_9|CP032237.1_2973660_2973834_-	pfam08178, GnsAB_toxin, GnsA/GnsB toxin of bacterial toxin-antitoxin system
GCA_003571765.1_ASM357176v1	CP032237	Escherichia coli strain ECCWS199 chromosome, complete genome	7	3100439-3100522	7	CRISPRCasFinder	no		c2c9_V-U4,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	Orphan	ATCTGCCTGTACGGCAGTGAACT	23	0	0	NA	NA	I-F	1	1	Orphan	c2c9_V-U4,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,RT	NA,NA	NA|431aa|up_9|CP032237.1_3085162_3086455_-	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional	NA|448aa|up_8|CP032237.1_3086545_3087889_-	PRK13342, PRK13342, recombination factor protein RarA; Reviewed	NA|204aa|up_7|CP032237.1_3087899_3088511_-	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA	NA|1343aa|up_6|CP032237.1_3088665_3092694_-	PRK10263, PRK10263, DNA translocase FtsK; Provisional	NA|165aa|up_5|CP032237.1_3092828_3093323_-	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp	NA|322aa|up_4|CP032237.1_3093867_3094833_+	PRK10262, PRK10262, thioredoxin reductase; Provisional	NA|589aa|up_3|CP032237.1_3094955_3096722_+	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|574aa|up_2|CP032237.1_3096722_3098444_+	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|235aa|up_1|CP032237.1_3098485_3099190_+	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed	NA|73aa|up_0|CP032237.1_3099474_3099693_+	PRK00276, infA, translation initiation factor IF-1; Validated	NA|759aa|down_0|CP032237.1_3100733_3103010_-	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional	NA|107aa|down_1|CP032237.1_3103040_3103361_-	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed	NA|75aa|down_2|CP032237.1_3103683_3103908_+	PRK09937, PRK09937, cold shock-like protein CspD	NA|649aa|down_3|CP032237.1_3103980_3105927_-	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|372aa|down_4|CP032237.1_3105923_3107039_-	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional	NA|331aa|down_5|CP032237.1_3107153_3108146_+	COG2990, VirK, Uncharacterized protein conserved in bacteria [Function unknown]	NA|553aa|down_6|CP032237.1_3108142_3109801_-	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair]	NA|232aa|down_7|CP032237.1_3110226_3110922_+	PRK05420, PRK05420, aquaporin Z; Provisional	NA|300aa|down_8|CP032237.1_3111416_3112316_+	COG2431, COG2431, Predicted membrane protein [Function unknown]	NA|551aa|down_9|CP032237.1_3112459_3114112_+	PRK05290, PRK05290, hybrid cluster protein; Provisional
GCA_003571765.1_ASM357176v1	CP032237	Escherichia coli strain ECCWS199 chromosome, complete genome	8	3236097-3236241	8	CRISPRCasFinder	no		c2c9_V-U4,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	Orphan	GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	52	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,RT	NA|60aa|up_1|CP032237.1_3234510_3234690_+,NA|70aa|down_7|CP032237.1_3246943_3247153_-	NA|330aa|up_9|CP032237.1_3223996_3224986_-	PRK00164, moaA, GTP 3',8-cyclase MoaA	NA|303aa|up_8|CP032237.1_3225382_3226291_+	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|674aa|up_7|CP032237.1_3226482_3228504_-	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|226aa|up_6|CP032237.1_3229082_3229760_-	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD	NA|252aa|up_5|CP032237.1_3229752_3230508_-	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional	NA|385aa|up_4|CP032237.1_3230494_3231649_-	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed	NA|430aa|up_3|CP032237.1_3232771_3234061_+	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated	NA|159aa|up_2|CP032237.1_3234119_3234596_+	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional	NA|60aa|up_1|CP032237.1_3234510_3234690_+	NA	NA|428aa|up_0|CP032237.1_3234747_3236031_+	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase	NA|99aa|down_0|CP032237.1_3237303_3237600_-	PRK11413, PRK11413, putative hydratase; Provisional	NA|318aa|down_1|CP032237.1_3241435_3242389_+	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|332aa|down_2|CP032237.1_3242429_3243425_-	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional	NA|273aa|down_3|CP032237.1_3243579_3244398_+	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional	NA|353aa|down_4|CP032237.1_3244398_3245457_-	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC	NA|230aa|down_5|CP032237.1_3245459_3246149_-	PRK09421, modB, molybdate ABC transporter permease subunit	NA|258aa|down_6|CP032237.1_3246148_3246922_-	PRK10677, modA, molybdate transporter periplasmic protein; Provisional	NA|70aa|down_7|CP032237.1_3246943_3247153_-	NA	NA|50aa|down_8|CP032237.1_3247088_3247238_-	pfam10766, AcrZ, Multidrug efflux pump-associated protein AcrZ	NA|263aa|down_9|CP032237.1_3247366_3248155_+	PRK10676, PRK10676, DNA-binding transcriptional regulator ModE; Provisional
GCA_003571765.1_ASM357176v1	CP032237	Escherichia coli strain ECCWS199 chromosome, complete genome	9	3492387-3492483	9	CRISPRCasFinder	no		c2c9_V-U4,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	Orphan	TTGTAGGCCTGATAAGATGCGTCAAGC	27	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,RT	NA,NA	NA|231aa|up_9|CP032237.1_3484182_3484875_-	PRK15195, PRK15195, molecular chaperone FimC	NA|181aa|up_8|CP032237.1_3485094_3485637_-	PRK15194, PRK15194, type 1 fimbrial protein subunit FimA	NA|289aa|up_7|CP032237.1_3486107_3486974_+	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA|71aa|up_6|CP032237.1_3486975_3487188_+	PRK11507, PRK11507, ribosome-associated protein YbcJ	NA|174aa|up_5|CP032237.1_3487295_3487817_+	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only]	NA|462aa|up_4|CP032237.1_3487852_3489238_-	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|165aa|up_3|CP032237.1_3489411_3489906_+	PRK10791, PRK10791, peptidylprolyl isomerase B	NA|241aa|up_2|CP032237.1_3489908_3490631_+	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional	NA|170aa|up_1|CP032237.1_3490748_3491258_+	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]	NA|356aa|up_0|CP032237.1_3491254_3492322_+	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	NA|298aa|down_0|CP032237.1_3492516_3493410_-	PRK09411, PRK09411, carbamate kinase; Reviewed	NA|272aa|down_1|CP032237.1_3493406_3494222_-	pfam11392, DUF2877, Protein of unknown function (DUF2877)	NA|420aa|down_2|CP032237.1_3494232_3495492_-	pfam06545, DUF1116, Protein of unknown function (DUF1116)	NA|556aa|down_3|CP032237.1_3495501_3497169_-	PRK06091, PRK06091, membrane protein FdrA; Validated	NA|350aa|down_4|CP032237.1_3497485_3498535_+	PRK15025, PRK15025, ureidoglycolate dehydrogenase; Provisional	NA|412aa|down_5|CP032237.1_3498556_3499792_+	TIGR03176, AllC, allantoate amidohydrolase	NA|262aa|down_6|CP032237.1_3499802_3500588_+	COG3257, GlxB, Uncharacterized protein, possibly involved in glyoxylate utilization [General function prediction only]	NA|382aa|down_7|CP032237.1_3500815_3501961_-	PRK09932, PRK09932, glycerate 3-kinase	NA|434aa|down_8|CP032237.1_3501982_3503284_-	PRK11412, PRK11412, uracil/xanthine transporter	NA|454aa|down_9|CP032237.1_3503340_3504702_-	PRK08044, PRK08044, allantoinase AllB
GCA_003571765.1_ASM357176v1	CP032237	Escherichia coli strain ECCWS199 chromosome, complete genome	10	3632761-3632905	10	CRISPRCasFinder	no		c2c9_V-U4,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	Orphan	TTTTGCAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCAT	43	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,RT	NA,NA|66aa|down_5|CP032237.1_3636582_3636780_-	NA|357aa|up_9|CP032237.1_3617899_3618970_-	PRK00147, queA, S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional	NA|194aa|up_8|CP032237.1_3619062_3619644_+	PRK10045, PRK10045, ACP phosphodiesterase	NA|605aa|up_7|CP032237.1_3619648_3621463_-	PRK10785, PRK10785, maltodextrin glucosidase; Provisional	NA|458aa|up_6|CP032237.1_3621621_3622995_-	PRK10580, proY, putative proline-specific permease; Provisional	NA|440aa|up_5|CP032237.1_3623070_3624390_-	PRK15433, PRK15433, branched-chain amino acid transporter carrier protein BrnQ	NA|432aa|up_4|CP032237.1_3624796_3626092_-	PRK11006, phoR, phosphate regulon sensor histidine kinase PhoR	NA|230aa|up_3|CP032237.1_3626149_3626839_-	PRK10161, PRK10161, phosphate response regulator transcription factor PhoB	NA|401aa|up_2|CP032237.1_3627028_3628231_+	PRK10966, PRK10966, exonuclease subunit SbcD; Provisional	NA|1049aa|up_1|CP032237.1_3628227_3631374_+	PRK10246, PRK10246, exonuclease subunit SbcC; Provisional	NA|395aa|up_0|CP032237.1_3631499_3632684_+	PRK10091, PRK10091, MFS transport protein AraJ; Provisional	NA|303aa|down_0|CP032237.1_3632928_3633837_-	PRK09557, PRK09557, fructokinase; Reviewed	NA|304aa|down_1|CP032237.1_3633961_3634873_+	COG2974, RdgC, DNA recombination-dependent growth factor C [DNA replication, recombination, and repair]	NA|94aa|down_2|CP032237.1_3635030_3635312_-	pfam10971, DUF2773, Protein of unknown function (DUF2773)	NA|95aa|down_3|CP032237.1_3635519_3635804_-	PRK10579, PRK10579, pyrimidine/purine nucleoside phosphorylase	NA|226aa|down_4|CP032237.1_3635875_3636553_-	PRK10481, PRK10481, hypothetical protein; Provisional	NA|66aa|down_5|CP032237.1_3636582_3636780_-	NA	NA|64aa|down_6|CP032237.1_3636810_3637002_-	PRK10380, PRK10380, hypothetical protein; Provisional	NA|175aa|down_7|CP032237.1_3637051_3637576_-	PRK03731, aroL, shikimate kinase AroL	NA|155aa|down_8|CP032237.1_3637752_3638217_-	PRK00124, PRK00124, YaiI/YqxD family protein	NA|270aa|down_9|CP032237.1_3638336_3639146_+	PRK11880, PRK11880, pyrroline-5-carboxylate reductase; Reviewed
GCA_003571765.1_ASM357176v1	CP032237	Escherichia coli strain ECCWS199 chromosome, complete genome	11	3994453-3994594	11	CRISPRCasFinder	no		c2c9_V-U4,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG	Orphan	GCTGGAGAGCAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA	52	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,RT	NA,NA|60aa|down_1|CP032237.1_3995053_3995233_+	NA|96aa|up_9|CP032237.1_3983443_3983731_-	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional	NA|429aa|up_8|CP032237.1_3983727_3985014_-	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional	NA|314aa|up_7|CP032237.1_3985064_3986006_-	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein	NA|257aa|up_6|CP032237.1_3986020_3986791_-	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed	NA|505aa|up_5|CP032237.1_3987264_3988779_+	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter	NA|381aa|up_4|CP032237.1_3988809_3989952_+	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated	NA|406aa|up_3|CP032237.1_3990080_3991298_+	PRK03525, PRK03525, L-carnitine CoA-transferase	NA|518aa|up_2|CP032237.1_3991371_3992925_+	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated	NA|262aa|up_1|CP032237.1_3993033_3993819_+	PRK03580, PRK03580, crotonobetainyl-CoA hydratase	NA|197aa|up_0|CP032237.1_3993824_3994415_+	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional	NA|132aa|down_0|CP032237.1_3994623_3995019_-	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF	NA|60aa|down_1|CP032237.1_3995053_3995233_+	NA	NA|1074aa|down_2|CP032237.1_3995280_3998502_-	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|383aa|down_3|CP032237.1_3998519_3999668_-	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|274aa|down_4|CP032237.1_4000123_4000945_-	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism]	NA|305aa|down_5|CP032237.1_4001111_4002026_-	PRK10768, PRK10768, ribonucleoside hydrolase RihC; Provisional	NA|317aa|down_6|CP032237.1_4002091_4003042_-	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed	NA|150aa|down_7|CP032237.1_4003043_4003493_-	PRK15095, PRK15095, FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional	NA|165aa|down_8|CP032237.1_4003617_4004112_-	PRK00376, lspA, lipoprotein signal peptidase	NA|939aa|down_9|CP032237.1_4004111_4006928_-	PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed
