assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003546975.1_ASM354697v1	CP022686	Escherichia coli Nissle 1917 chromosome, complete genome	1	1006283-1006396	1	CRISPRCasFinder	no		DEDDh,DinG,cas3,csa3,c2c9_V-U4,cas14j	Orphan	TTTGTAGGCCGGATAAGCGAAGCGCATCCGGCA	33	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,cas3,csa3,c2c9_V-U4,cas14j	NA,NA	NA|395aa|up_9|CP022686.1_985185_986370_+	PRK05790, PRK05790, putative acyltransferase; Provisional	NA|259aa|up_8|CP022686.1_986443_987220_-	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown]	NA|550aa|up_7|CP022686.1_987224_988874_-	COG5445, COG5445, Predicted secreted protein [Function unknown]	NA|1535aa|up_6|CP022686.1_988874_993479_-	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only]	NA|208aa|up_5|CP022686.1_993412_994036_-	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown]	NA|563aa|up_4|CP022686.1_994032_995721_-	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown]	NA|876aa|up_3|CP022686.1_995869_998497_-	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|241aa|up_2|CP022686.1_998643_999366_+	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|1253aa|up_1|CP022686.1_999505_1003264_-	PRK09752, PRK09752, AIDA-I family autotransporter YfaL	NA|762aa|up_0|CP022686.1_1003945_1006231_+	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha	NA|377aa|down_0|CP022686.1_1006420_1007551_+	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed	NA|85aa|down_1|CP022686.1_1007550_1007805_+	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein	NA|217aa|down_2|CP022686.1_1007858_1008509_-	PRK09902, PRK09902, lipopolysaccharide kinase InaA	NA|359aa|down_3|CP022686.1_1008711_1009788_-	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional	NA|453aa|down_4|CP022686.1_1009792_1011151_-	PRK11273, glpT, glycerol-3-phosphate transporter	NA|543aa|down_5|CP022686.1_1011423_1013052_+	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A	NA|420aa|down_6|CP022686.1_1013041_1014301_+	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]	NA|397aa|down_7|CP022686.1_1014297_1015488_+	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit	NA|309aa|down_8|CP022686.1_1015680_1016607_+	PRK09956, PRK09956, ISNCY family transposase	NA|268aa|down_9|CP022686.1_1016647_1017451_-	PRK10128, PRK10128, 2-keto-3-deoxy-L-rhamnonate aldolase; Provisional
GCA_003546975.1_ASM354697v1	CP022686	Escherichia coli Nissle 1917 chromosome, complete genome	2	3313439-3313585	2	CRISPRCasFinder	no		DEDDh,DinG,cas3,csa3,c2c9_V-U4,cas14j	Orphan	GTCTTATCAGGCCTACGAGTTCGGTGCTGTGTAGGTCGGATAAGGCGTTCA	51	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,cas3,csa3,c2c9_V-U4,cas14j	NA,NA|111aa|down_6|CP022686.1_3322765_3323098_-,NA|165aa|down_9|CP022686.1_3326242_3326737_-	NA|335aa|up_9|CP022686.1_3301913_3302918_-	PRK02102, PRK02102, ornithine carbamoyltransferase; Validated	NA|311aa|up_8|CP022686.1_3302941_3303874_-	PRK12354, PRK12354, carbamate kinase; Reviewed	NA|407aa|up_7|CP022686.1_3303884_3305105_-	PRK01388, PRK01388, arginine deiminase; Provisional	NA|151aa|up_6|CP022686.1_3305782_3306235_+	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism]	NA|335aa|up_5|CP022686.1_3306279_3307284_-	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional	NA|139aa|up_4|CP022686.1_3307445_3307862_+	PRK11191, PRK11191, ribonuclease E inhibitor RraB	NA|168aa|up_3|CP022686.1_3308039_3308543_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|396aa|up_2|CP022686.1_3308735_3309923_+	COG4269, COG4269, Predicted membrane protein [Function unknown]	NA|952aa|up_1|CP022686.1_3309969_3312825_-	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|148aa|up_0|CP022686.1_3312824_3313268_-	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated	NA|504aa|down_0|CP022686.1_3313621_3315133_-	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|367aa|down_1|CP022686.1_3315399_3316500_+	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional	NA|361aa|down_2|CP022686.1_3316499_3317582_+	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional	NA|501aa|down_3|CP022686.1_3317700_3319203_-	pfam05872, DUF853, Bacterial protein of unknown function (DUF853)	NA|340aa|down_4|CP022686.1_3319332_3320352_-	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|637aa|down_5|CP022686.1_3320722_3322633_+	cd01184, INT_C_like_1, Uncharacterized site-specific tyrosine recombinase, C-terminal catalytic domain	NA|111aa|down_6|CP022686.1_3322765_3323098_-	NA	NA|189aa|down_7|CP022686.1_3324756_3325323_+	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain	NA|282aa|down_8|CP022686.1_3325336_3326182_+	pfam13271, DUF4062, Domain of unknown function (DUF4062)	NA|165aa|down_9|CP022686.1_3326242_3326737_-	NA
