The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP023434	Aerococcaceae bacterium ZY16052 chromosome, complete genome	2572159	183187	247117	2572159	integrase,transposase	Staphylococcus_phage(25.0%)	53	175518:175533	246116:246131
175518:175533	attL	GGTCTCTTTTTTATTT	NA	NA	NA	NA
AXY24698.1|183187_184945_-|transposase	transposase	transposase	NA	NA	NA	NA
AXY24699.1|185431_185878_+	50S ribosomal protein L13	NA	NA	NA	NA	NA
AXY24700.1|185895_186288_+	30S ribosomal protein S9	NA	NA	NA	NA	NA
AXY24701.1|186412_187090_-	hypothetical protein	NA	NA	NA	NA	NA
AXY24702.1|187296_187740_+	hypothetical protein	NA	NA	NA	NA	NA
AXY24703.1|187749_188784_+	hypothetical protein	NA	NA	NA	NA	NA
AXY24704.1|188777_189539_+	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	35.8	3.0e-31
AXY24705.1|190058_190550_-	hypothetical protein	NA	NA	NA	NA	NA
AXY24706.1|190684_191068_-	hypothetical protein	NA	NA	NA	NA	NA
AXY24707.1|191323_192499_+	carboxylate--amine ligase	NA	NA	NA	NA	NA
AXY24708.1|192509_193262_+|transposase	transposase	transposase	NA	NA	NA	NA
AXY24709.1|193699_194482_+	hypothetical protein	NA	NA	NA	NA	NA
AXY24710.1|194494_195322_+	hypothetical protein	NA	NA	NA	NA	NA
AXY24711.1|195654_196821_+	UDP-glucose 6-dehydrogenase	NA	M1I798	Paramecium_bursaria_Chlorella_virus	54.2	3.5e-111
AXY24712.1|196854_197433_+	hypothetical protein	NA	NA	NA	NA	NA
AXY24713.1|197787_198489_-	hypothetical protein	NA	NA	NA	NA	NA
AXY24714.1|198638_199187_-	isochorismatase	NA	G3MA16	Bacillus_virus	41.9	1.1e-30
AXY24715.1|199792_200260_+	cupin	NA	NA	NA	NA	NA
AXY24716.1|200385_201264_-	sugar isomerase	NA	NA	NA	NA	NA
AXY24717.1|201432_202854_+	6-phospho-beta-glucosidase	NA	NA	NA	NA	NA
AXY24718.1|202864_203707_+	HAD family hydrolase	NA	NA	NA	NA	NA
AXY24719.1|204057_205281_+	hypothetical protein	NA	NA	NA	NA	NA
AXY24720.1|205572_206310_+	multidrug ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	30.4	1.5e-27
AXY24721.1|206302_207637_+	hypothetical protein	NA	NA	NA	NA	NA
AXY24722.1|207708_209520_+	hypothetical protein	NA	NA	NA	NA	NA
AXY26685.1|210614_211448_+	hypothetical protein	NA	NA	NA	NA	NA
AXY24723.1|213353_215441_+	hypothetical protein	NA	NA	NA	NA	NA
AXY24724.1|215678_215969_+	hypothetical protein	NA	NA	NA	NA	NA
AXY24725.1|215984_216665_+	hypothetical protein	NA	NA	NA	NA	NA
AXY24726.1|216558_216813_+	hypothetical protein	NA	NA	NA	NA	NA
AXY24727.1|216836_217025_+	hypothetical protein	NA	NA	NA	NA	NA
AXY24728.1|217086_217272_+	hypothetical protein	NA	NA	NA	NA	NA
AXY24729.1|217489_217972_+	hypothetical protein	NA	NA	NA	NA	NA
AXY24730.1|217968_218397_+	hypothetical protein	NA	NA	NA	NA	NA
AXY24731.1|218742_219771_+	hypothetical protein	NA	NA	NA	NA	NA
AXY24732.1|219929_220220_+	hypothetical protein	NA	NA	NA	NA	NA
AXY24733.1|220378_220609_+	hypothetical protein	NA	NA	NA	NA	NA
AXY24734.1|220767_220986_+	hypothetical protein	NA	NA	NA	NA	NA
AXY24735.1|221144_221378_+	hypothetical protein	NA	NA	NA	NA	NA
AXY24736.1|221490_221676_+	hypothetical protein	NA	NA	NA	NA	NA
AXY24737.1|221855_222938_+	peptidase M28	NA	NA	NA	NA	NA
AXY24738.1|222951_223959_+	lipoate--protein ligase	NA	NA	NA	NA	NA
AXY24739.1|224424_227082_+	hypothetical protein	NA	A0A141HSE6	Bacillus_phage	35.5	6.6e-17
AXY24740.1|227300_229601_-	bifunctional glutamate--cysteine ligase/glutathione synthetase	NA	NA	NA	NA	NA
AXY24741.1|236877_238200_-|transposase	ISL3 family transposase	transposase	NA	NA	NA	NA
AXY24742.1|238349_239483_-|integrase	site-specific integrase	integrase	A0A1S5S7K9	Streptococcus_phage	36.2	5.6e-58
AXY24743.1|239536_240469_-	hypothetical protein	NA	NA	NA	NA	NA
AXY24744.1|240481_241228_-	multidrug transporter	NA	S4SVC5	Staphylococcus_phage	39.8	2.6e-35
AXY24745.1|241261_242488_-|transposase	ISL3 family transposase	transposase	NA	NA	NA	NA
AXY24746.1|243042_243336_+	hypothetical protein	NA	NA	NA	NA	NA
AXY24747.1|243619_244450_-	exodeoxyribonuclease III	NA	M1PSC0	Streptococcus_phage	70.1	6.1e-110
AXY24748.1|244659_245655_+	hypothetical protein	NA	NA	NA	NA	NA
AXY24749.1|246184_247117_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
246116:246131	attR	AAATAAAAAAGAGACC	NA	NA	NA	NA
>prophage 2
CP023434	Aerococcaceae bacterium ZY16052 chromosome, complete genome	2572159	427932	468094	2572159	head,capsid,portal,holin,terminase,tail	Streptococcus_phage(31.43%)	55	NA	NA
AXY24896.1|427932_429348_-	hypothetical protein	NA	S5M9Y4	Brevibacillus_phage	42.2	3.6e-22
AXY24897.1|429340_429553_-|holin	holin	holin	A0A075EHP3	Siphovirus	42.4	1.8e-05
AXY24898.1|429574_429919_-	hypothetical protein	NA	A0A1P8BKU2	Lactococcus_phage	36.5	1.3e-10
AXY24899.1|429937_432481_-	hypothetical protein	NA	A0A2P1JTV5	Anoxybacillus_phage	22.9	2.8e-12
AXY24900.1|432490_433525_-	hypothetical protein	NA	NA	NA	NA	NA
AXY24901.1|433521_435021_-	hypothetical protein	NA	A0A1S5SA59	Streptococcus_phage	45.8	1.7e-94
AXY24902.1|435020_435737_-	hypothetical protein	NA	A0A1S5SA63	Streptococcus_phage	47.5	1.1e-56
AXY24903.1|435733_439222_-	hypothetical protein	NA	A1EAB0	Streptococcus_phage	71.9	2.3e-86
AXY24904.1|439236_439545_-	hypothetical protein	NA	NA	NA	NA	NA
AXY24905.1|439595_439970_-	hypothetical protein	NA	A0A2P1JTV4	Anoxybacillus_phage	51.4	2.5e-23
AXY24906.1|439998_440616_-|tail	phage major tail protein, TP901-1 family	tail	D7RWD5	Brochothrix_phage	37.7	2.1e-22
AXY24907.1|440628_441012_-	hypothetical protein	NA	NA	NA	NA	NA
AXY24908.1|441011_441356_-	hypothetical protein	NA	A0A1L2K255	Streptococcus_phage	45.4	1.2e-16
AXY24909.1|441356_441650_-	hypothetical protein	NA	NA	NA	NA	NA
AXY24910.1|441646_441967_-|head,tail	phage head-tail adapter protein	head,tail	A0A2H4IYR7	uncultured_Caudovirales_phage	45.8	6.7e-17
AXY24911.1|441971_442151_-	hypothetical protein	NA	Q4ZC68	Staphylococcus_virus	53.8	4.6e-07
AXY24912.1|442150_442948_-|capsid	N4-gp56 family major capsid protein	capsid	A0A2H4PQL1	Staphylococcus_phage	58.5	2.7e-83
AXY24913.1|442949_443537_-	hypothetical protein	NA	C9E2J3	Enterococcus_phage	32.3	3.6e-08
AXY24914.1|443639_443858_-	hypothetical protein	NA	NA	NA	NA	NA
AXY24915.1|444106_444337_-	hypothetical protein	NA	NA	NA	NA	NA
AXY26692.1|444339_446037_-	hypothetical protein	NA	A0A1P8BM47	Lactococcus_phage	36.6	1.1e-46
AXY24916.1|446020_447385_-|portal	phage portal protein	portal	Q9AZ65	Lactococcus_phage	45.0	7.9e-99
AXY24917.1|447384_448647_-|terminase	PBSX family phage terminase large subunit	terminase	B6CXD2	Clostridium_phage	45.3	1.3e-95
AXY24918.1|448639_449164_-|terminase	terminase	terminase	A0A097BYA2	Enterococcus_phage	50.0	7.9e-39
AXY24919.1|449465_449885_-	transcriptional regulator	NA	NA	NA	NA	NA
AXY24920.1|450090_450324_-	hypothetical protein	NA	NA	NA	NA	NA
AXY24921.1|450327_450558_-	hypothetical protein	NA	NA	NA	NA	NA
AXY24922.1|450669_451161_-	single-stranded DNA-binding protein	NA	A0A218MNB4	uncultured_virus	67.5	5.1e-40
AXY24923.1|451157_451616_-	hypothetical protein	NA	Q0R588	Streptococcus_phage	44.0	4.3e-09
AXY24924.1|451521_452001_-	hypothetical protein	NA	NA	NA	NA	NA
AXY24925.1|452002_452914_-	DnaD domain protein	NA	A0A0A7S128	Clostridium_phage	36.4	1.6e-34
AXY24926.1|452996_453305_-	hypothetical protein	NA	D9J0X5	Brochothrix_phage	53.8	1.0e-22
AXY24927.1|453315_454167_-	recombinase RecT	NA	D2IYT9	Enterococcus_phage	55.0	1.4e-80
AXY24928.1|454182_454398_-	hypothetical protein	NA	A0A2I6QR20	Streptococcus_phage	64.8	3.9e-21
AXY24929.1|454400_455360_-	hypothetical protein	NA	D2IYT8	Enterococcus_phage	42.6	6.7e-60
AXY24930.1|455329_456112_-	hypothetical protein	NA	NA	NA	NA	NA
AXY24931.1|456083_456278_-	hypothetical protein	NA	NA	NA	NA	NA
AXY24932.1|456463_456901_-	hypothetical protein	NA	NA	NA	NA	NA
AXY24933.1|456893_457868_-	hypothetical protein	NA	A0A286QN42	Streptococcus_phage	43.9	7.8e-32
AXY24934.1|458153_458366_-	hypothetical protein	NA	A0A1X9I6I3	Streptococcus_phage	39.3	6.7e-05
AXY24935.1|458508_458886_+	hypothetical protein	NA	A0A1S5SCT1	Streptococcus_phage	43.0	6.1e-17
AXY24936.1|459017_459275_-	hypothetical protein	NA	NA	NA	NA	NA
AXY24937.1|459349_459517_+	YjzC family protein	NA	A0A0A7RTS6	Clostridium_phage	70.6	4.7e-14
AXY24938.1|459513_459720_-	hypothetical protein	NA	NA	NA	NA	NA
AXY24939.1|459701_459899_-	hypothetical protein	NA	NA	NA	NA	NA
AXY24940.1|460341_460596_-	DUF739 domain-containing protein	NA	C5IUM3	Streptococcus_phage	37.0	3.2e-06
AXY24941.1|460768_461182_+	hypothetical protein	NA	A0A1S5S8T5	Streptococcus_phage	34.6	1.5e-08
AXY24942.1|461187_461589_+	hypothetical protein	NA	R9TQI1	Paenibacillus_phage	36.1	5.3e-11
AXY24943.1|461642_462143_+	hypothetical protein	NA	NA	NA	NA	NA
AXY24944.1|462257_462677_+	hypothetical protein	NA	NA	NA	NA	NA
AXY24945.1|462774_463770_+	hypothetical protein	NA	A0A1Q1PVS3	Staphylococcus_phage	26.5	1.7e-21
AXY24946.1|463895_465323_+	recombinase family protein	NA	D7RWL2	Brochothrix_phage	43.0	1.4e-93
AXY24947.1|465378_466206_+	ribokinase	NA	NA	NA	NA	NA
AXY24948.1|466177_466576_+	D-ribose pyranase	NA	NA	NA	NA	NA
AXY24949.1|466606_468094_+	D-xylose ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	26.9	1.6e-12
>prophage 3
CP023434	Aerococcaceae bacterium ZY16052 chromosome, complete genome	2572159	504393	512126	2572159	transposase	Paenibacillus_phage(33.33%)	7	NA	NA
AXY24985.1|504393_505137_+	ATP-binding protein	NA	A0A0D4DBZ2	Acinetobacter_phage	33.3	3.6e-05
AXY24986.1|505263_505524_+	hypothetical protein	NA	NA	NA	NA	NA
AXY24987.1|505600_506296_-	hypothetical protein	NA	A0A0C5AC89	Paenibacillus_phage	46.5	5.9e-50
AXY24988.1|506462_507146_-|transposase	transposase	transposase	A0A0C5AJ29	Paenibacillus_phage	33.5	7.6e-18
AXY24989.1|507557_509378_-	flavocytochrome c	NA	A0A2P0ZL82	Lactobacillus_phage	27.6	1.4e-21
AXY24990.1|509474_511394_-	flavocytochrome c	NA	A0A2P0ZL82	Lactobacillus_phage	39.3	6.5e-107
AXY24991.1|511802_512126_-	hypothetical protein	NA	H7BUM7	unidentified_phage	30.2	2.2e-07
>prophage 4
CP023434	Aerococcaceae bacterium ZY16052 chromosome, complete genome	2572159	2128569	2143415	2572159	integrase,transposase	Streptococcus_phage(76.92%)	17	2130357:2130370	2135147:2135160
AXY26291.1|2128569_2129553_+	multidrug ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	35.2	5.6e-22
AXY26292.1|2129539_2130352_+	ABC transporter permease	NA	NA	NA	NA	NA
2130357:2130370	attL	AAAGGAGAGAGGAT	NA	NA	NA	NA
AXY26293.1|2130377_2130590_+	hypothetical protein	NA	NA	NA	NA	NA
AXY26294.1|2130711_2131929_-|integrase	site-specific integrase	integrase	A0A1S5SEW7	Streptococcus_phage	100.0	3.7e-233
AXY26295.1|2132010_2132214_-	excisionase	NA	A0A1S5SF07	Streptococcus_phage	100.0	4.0e-31
AXY26296.1|2132197_2132449_+	hypothetical protein	NA	NA	NA	NA	NA
AXY26769.1|2132592_2134131_+|transposase	IS21 family transposase	transposase	U5N3F9	Enterobacteria_phage	26.9	1.4e-19
AXY26297.1|2134127_2134886_+	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	36.7	7.1e-41
AXY26298.1|2135161_2135392_-	helix-turn-helix domain-containing protein	NA	A0A1S5SEX1	Streptococcus_phage	100.0	2.7e-36
2135147:2135160	attR	AAAGGAGAGAGGAT	NA	NA	NA	NA
AXY26299.1|2135388_2135811_-	sigma-70 family RNA polymerase sigma factor	NA	A0A1S5SEW0	Streptococcus_phage	100.0	2.5e-72
AXY26300.1|2136315_2136669_+	XRE family transcriptional regulator	NA	A0A1S5SFA6	Streptococcus_phage	100.0	1.3e-58
AXY26301.1|2136728_2136914_-	conjugal transfer protein	NA	D0R0F6	Streptococcus_phage	67.9	3.9e-17
AXY26302.1|2137014_2138934_-	tetracycline resistance ribosomal protection protein	NA	A0A1S5SF82	Streptococcus_phage	99.1	0.0e+00
AXY26303.1|2138949_2139036_-	tetracycline resistance protein	NA	NA	NA	NA	NA
AXY26304.1|2139310_2140243_-	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	99.4	3.1e-171
AXY26305.1|2140239_2141241_-	peptidase P60	NA	A0A1S5SEZ8	Streptococcus_phage	100.0	5.0e-191
AXY26306.1|2141237_2143415_-	hypothetical protein	NA	A0A1S5SF30	Streptococcus_phage	100.0	0.0e+00
>prophage 5
CP023434	Aerococcaceae bacterium ZY16052 chromosome, complete genome	2572159	2419619	2432580	2572159	tRNA	Streptococcus_phage(30.0%)	12	NA	NA
AXY26549.1|2419619_2421323_-	hypothetical protein	NA	D2KRB9	Lactobacillus_phage	42.0	1.3e-13
AXY26550.1|2421625_2422894_+|tRNA	tyrosine--tRNA ligase	tRNA	A0A1L2CUL7	Pectobacterium_phage	42.2	2.5e-86
AXY26551.1|2423028_2423214_-	hypothetical protein	NA	NA	NA	NA	NA
AXY26552.1|2423215_2423902_-	hypothetical protein	NA	NA	NA	NA	NA
AXY26553.1|2423902_2425324_-	sensor histidine kinase	NA	W8CYF6	Bacillus_phage	28.5	2.7e-25
AXY26554.1|2425320_2426037_-	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	35.8	1.2e-32
AXY26555.1|2426160_2426604_-	single-stranded DNA-binding protein	NA	S5MNH0	Brevibacillus_phage	37.7	1.5e-14
AXY26556.1|2426672_2427593_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	39.7	1.6e-50
AXY26557.1|2427612_2428635_-	hypothetical protein	NA	A1IMD5	Streptococcus_phage	52.6	3.0e-90
AXY26558.1|2428631_2429519_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	34.8	2.0e-10
AXY26559.1|2429681_2431406_-	phosphoglucomutase	NA	A0A1X9I671	Streptococcus_phage	54.0	3.1e-177
AXY26560.1|2431644_2432580_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	51.9	2.1e-87
